Pregenerated sensors for DLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014773Ensembl transcript IDs: ENSMUST00000014917.8, ENSMUST00000143460.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTGTCGGGCGCCTCTGCTAACTCTGAGAGAACCAGCTTCGCCTaGACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: AVSGASANSERTSFA*TWFSAAVPGFPLPS Trigger: GGAAGGGAGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAGAGTTAGCAGAGGCGCCCGACACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| 3UTR CCA 90 bp | AAAAAGGACAATAAAGGCAGTTGTGTTTCTAGTTCAAGGAAAGACTaGCTCATAGTAATCCAAGATAGACGTGTGGGCAGTGCGTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KKDNKGSCVSSSRKD*LIVIQDRRVGSACF Trigger: GAAGCACGCACTGCCCACACGTCTATCTTGGATTACTATGAGCCAGTCTTTCCTTGAACTAGAAACACAACTGCCTTTATTGTCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCTCAGCAGCAGTCCCTaGGTTTCCTCTCCCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSKQLSIVQWEQPAGSPALSSSP*VSSPFL Trigger: GAGGAAGGGAGAGGAAACCCAGGGACTGCTGCTGAG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| 3UTR CCA 72 bp | AATATATACTCTTCAAAGCAACTGTCCATAGTGCAATaGGAACAACCAGCAGGCAGTCCAGCGGCAGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: NIYSSKQLSIVQ*EQPAGSPAAAK Trigger: TTTGGCTGCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| 3UTR CCA 72 bp | AATAAAGGCAGTTGTGTTTCTAGTTCAAGGAAAGACTaGCTCATAGTAATCCAAGATAGACGTGTGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: NKGSCVSSSRKD*LIVIQDRRVGS Trigger: ACTGCCCACACGTCTATCTTGGATTACTATGAGCCAGTCTTTCCTTGAACTAGAAACACAACTGCCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCACCCAGCACTGGCGTaGCAGCACTGCCGTAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFHPALA*QHCRRC Trigger: GCACCTACGGCAGTGCTGTCACGCCAGTGCTGGGTG...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCGCAGGTGCCCCCATTTaGACACGGGGAGGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFAGAPI*TRGGGT Trigger: TGTGCCTCCTCCCCGTGTGCAAATGGGGGCACCTGC...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCTCTCCCACAGTGAGGTaGCTCTGTGTGGTCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFSPTVR*LCVVRR Trigger: CCGCCTGACCACACAGAGGCACCTCACTGTGGGAGA...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCCCGGAGCTCCAGACCTaGCACAGCAGGGCAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGPELQT*HSRAET Trigger: GGTCTCTGCCCTGCTGTGCCAGGTCTGGAGCTCCGG...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGGCGGGGTCGATGCCTaGGCCATCAGGCAGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAGGVDA*AIRQAE Trigger: TTCAGCCTGCCTGATGGCGCAGGCATCGACCCCGCC...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTGAAGCAAGGGCCATCTaGACAGGTCATGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSEARAI*TGHGAQ Trigger: CTGAGCGCCATGACCTGTGCAGATGGCCCTTGCTTC...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTGGCCTGGTAGTGCTTaGGGCATACGCGAAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSWPGSA*GIRERR Trigger: CCTTCTTTCGCGTATGCCTCAAGCACTACCAGGCCA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCAGCACTGCCGTAGGTaGAGGGTGGCTCCGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAQHCRR*RVAPVT Trigger: TGTCACCGGAGCCACCCTGCACCTACGGCAGTGCTG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCGGCACAGGTAAGAGTTaGCGAGGTCCACACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFGTGKS*RGPHTW Trigger: CCAAGTGTGTGGACCTCGGCAACTCTTACCTGTGCC...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCCCTCTGGTGGCAGGTaGCCCCATTATGGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAPSGGR*PHYGRV Trigger: CACCCTGCCATAATGGGGCCACCTGCCACCAGAGGG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCAGAAACTGGCAGTTaGGGCCGCCATAGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAAETGS*GRHSPG Trigger: CCCAGGGCTATGGCGGCCCCAACTGCCAGTTTCTGC...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCCACCATGGGCCCTGGTaGTGGCTCAGGGAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGHHGPW*WLREQK Trigger: TTTCTGCTCCCTGAGCCACCACCAGGGCCCATGGTG...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCATTCTTCTCCCACAGTaGGGTGCCTCTGTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFILLPQ*GASVWS Trigger: TGACCACACAGAGGCACCTCACTGTGGGAGAAGAAT...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTAACATCGTCCTCCATTaGAGCAAGGGCCATCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSNIVLH*SKGHLH Trigger: GTGCAGATGGCCCTTGCTTCAATGGAGGACGATGTT...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCGACAGATTGGGTCAGTaGAGTACTGGCCTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFDRLGQ*STGLSS Trigger: GCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTC...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCCAGAGAGAAGGTACCTaGCCAGGTGAAGCCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGQREGT*PGEAEG Trigger: CCCTTCGGCTTCACCTGGCCAGGTACCTTCTCTCTG...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCCACTGCCAGGGTTGCTaGCAGGTGCCATGGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGHCQGC*QVPWRQ Trigger: TTGTCTCCATGGCACCTGCCAGCAACCCTGGCAGTG...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCCGTGTTGGTGCAGGTaGCTCCATTCCTGCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAPCWCR*LHSCTA Trigger: AGCCGTGCAGGAATGGAGCCACCTGCACCAACACGG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCATGGGCCCTGGTGGTaGCTCAGGGAGCAGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAHGPWW*LREQKL Trigger: CAGTTTCTGCTCCCTGAGCCACCACCAGGGCCCATG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTGCAGAGCTCTGTGACTaGCACTTGGTGTCACGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSAELCD*HLVSRL Trigger: CAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGC...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTCTTCTTCTCACAGTTaGAGCCAGAGAAGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSSSSHS*SQRSPR Trigger: CCTTGGGCTTCTCTGGCTTCAACTGTGAGAAGAAGA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGTCCTGGCAGTTACACTaGCAGGGTTGCTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPASWQLH*QGCWQV Trigger: CACCTGCCAGCAACCCTGGCAGTGTAACTGCCAGGA...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCCCCATTATGGCAGGGTaGATGCTCACACCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGPIMAG*MLTPAD Trigger: GTCAGCAGGTGTGAGCATGCACCCTGCCATAATGGG...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTCACAGTATCCATGTTaGTCATCACACCCTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSSQYPC*SSHPGR Trigger: TCTGCCAGGGTGTGATGACCAACATGGATACTGTGA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGAGGTGGCTCCATTCCTaGACGGCTTATGGTGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPARWLHS*TAYGEY Trigger: GTACTCACCATAAGCCGTGCAGGAATGGAGCCACCT...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTACGCTGGCCCCTCTGGTaGCAGGTGGCCCCATTATGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLRWPLW*QVAPLW Trigger: CCATAATGGGGCCACCTGCCACCAGAGGGGCCAGCG...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTTGGTGTTCTTGATCTaGGTAGCCCCAATGATGCTA | + |
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Preference number: 4 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSLVFLI*VAPMML Trigger: TAGCATCATTGGGGCTACCCAGATCAAGAACACCAA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCACACTCATCCTTTTCTaGAGACAGAACATACACCGA | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFTLILF*RQNIHR Trigger: TCGGTGTATGTTCTGTCTGCAGAAAAGGATGAGTGT...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATCCCCTGGCCCGTGTTaGTGCAGGTGGCTCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLSPGPC*CRWLHS Trigger: GGAATGGAGCCACCTGCACCAACACGGGCCAGGGGA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCAGAGTAGACAGACTCTaGCCTTTTTCTGTCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LREPASPEPGSQQQSLGFRVDRL*PFSVRN Trigger: ATTCCTGACAGAAAAAGGCCAGAGTCTGTCTACTCT...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGCAGGGTGGCTCCGGTaGCACGCTGGCCTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAAGWLR*HAGLVV Trigger: CACTACCAGGCCAGCGTGTCACCGGAGCCACCCTGC...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCGTACTTGGTGTCCTTTaGAGTAGAGTAGACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: FKATVHSAMGTTSRQSSGVLGVL*SRVDRL Trigger: GAGTCTGTCTACTCTACTTCAAAGGACACCAAGTAC...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACACCACCATGGGCCCTaGTGGTGGCTCAGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAHHHGP*WWLREQ Trigger: CTGCTCCCTGAGCCACCACCAGGGCCCATGGTGGTG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATTACACTGCCAGGGTTaGTGGCAGGTGCCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLLHCQG*WQVPWR Trigger: TCTCCATGGCACCTGCCAGCAACCCTGGCAGTGTAA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGAGAACATACACCGACTaGTACTTGGTGTCCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSKQLSIVQWEQPAGSPARTYTD*YLVSFE Trigger: TTCAAAGGACACCAAGTACCAGTCGGTGTATGTTCT...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGGTCAGTGCAGTACTaGCCTTTCCAGCCAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAGSVQY*PFQPGS Trigger: CGACCCTGGCTGGAAAGGCCAGTACTGCACTGACCC...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACCTGCCAGCCAACTCTaGACTTGCACTCCCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAPASQL*TCTPLV Trigger: AACCAGGGGAGTGCAAGTGCAGAGTTGGCTGGCAGG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAAGGGTTGCTGGCAGGTaGCATGGAGACAACCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPARVAGR*HGDNLG Trigger: ACCCAGGTTGTCTCCATGGCACCTGCCAGCAACCCT...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAAGCCGGGAGGGCAGGTaGAAGAGAAGCTGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPASREGR*KRSCPQ Trigger: TTGAGGACAGCTTCTCTTGCACCTGCCCTCCCGGCT...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCATGCTGGCAGGTGCCATaGAGACAACCTGGGTATCGG | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPACWQVP*RQPGYR Trigger: CCGATACCCAGGTTGTCTCCATGGCACCTGCCAGCA...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACAGGTGGCCCCATTATaGCAGGGTGCATGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAQVAPL*QGACSH Trigger: GTGTGAGCATGCACCCTGCCATAATGGGGCCACCTG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATGGCTAGGTTGTTCATaGTTTCTGTCTCTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLWLGCS*FLSLPH Trigger: GTGGGGGAGAGACAGAAACCATGAACAACCTAGCCA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATATGGAGGGCTTCAATaGTCAGAGAGAAGGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLYGGLQ*SERRYL Trigger: CAGGTACCTTCTCTCTGATCATTGAAGCCCTCCATA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCATTATGGCAGGGTGCATaGTCACACCTGCTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPALWQGA*SHLLTG Trigger: CCCTGTCAGCAGGTGTGAGCATGCACCCTGCCATAA...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATCTCGCGCTGGCAATTaGCTAGGTTGTTCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLSRAGN*LGCSWF Trigger: AAACCATGAACAACCTAGCCAATTGCCAGCGCGAGA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTATTGTTGACGAACTCCTaGAGCTTCAGCTCAAATACG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSAAFIGAISLEFYLLLTNS*SFSSNT Trigger: CGTATTTGAGCTGAAGCTGCAGGAGTTCGTCAACAA...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACTTCCAGCTCACAGTTaGCACCTGTATACCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPALPAHS*HLYTQV Trigger: GACCTGGGTATACAGGTGCCAACTGTGAGCTGGAAG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGTTCAGGTGGAGGCTaGTGTTTCTGTAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAGSGGG*CFCSFS Trigger: GCTGAAGCTACAGAAACACCAGCCTCCACCTGAACC...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCATGGCTTCATCTCCCTTaGGGTCTCGAACGAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAWLHLP*GLERGY Trigger: ATAACCTCGTTCGAGACCTCAAGGGAGATGAAGCCA...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR GCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCATTCTGGGTTTTCTGTTaGGAGGTCATCGGGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAFWVFC*EVIGRV Trigger: GACTCTCCCGATGACCTCGCAACAGAAAACCCAGAA...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CCA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGCTGATGAGTCTTTCTaGGTTTTCTGTTGCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAADESF*VFCCEV Trigger: GACCTCGCAACAGAAAACCCAGAAAGACTCATCAGC...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | AGCACCACCCCGGCACACACGGCCACCCAGGGGAAGGGCCCGCCCTaGCTCTCCATATGCCTCTCACTGAGGTCCACCACCATGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: STTPAHTATQGKGPP*LSICLSLRSTTMGP Trigger: AGGGCCCATGGTGGTGGACCTCAGTGAGAGGCATATGGAGAGCCAGGGCGGGCCCTTCCCCTGGGTGGCCGTGTGTGCCGGGGTGGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS TCA 90 bp | CGTAGGTGCAGGGTGGCTCCGGTGACACGCTGGCCTGGTAGTGCTTaGGGCATACGCGAAAGAAGGTCCTGCAGGCGCAAGGCGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRCRVAPVTRWPGSA*GIRERRSCRRKAGQ Trigger: CTGGCCCGCCTTGCGCCTGCAGGACCTTCTTTCGCGTATGCCTCAAGCACTACCAGGCCAGCGTGTCACCGGAGCCACCCTGCACCTACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTCCCCCGCGGCAGCAGTaGCGGTTCCCCAGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSPPRQQ*RFPSSP Trigger: GGGGCTGCTGGGGAACCGCAACTGCTGCCGCGGGGG...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | ACACCTGCTGACAGGGGCGCTGCAGTTCTTGCCCGTGTAGCCAGGTaGGCAGGTACAGGAGAAGTCGTTCACACTGTCCCGGCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPADRGAAVLARVAR*AGTGEVVHTVPAGA Trigger: GGCACCTGCCGGGACAGTGTGAACGACTTCTCCTGTACCTGCCCACCTGGCTACACGGGCAAGAACTGCAGCGCCCCTGTCAGCAGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 90 bp | CAGCACTGGCGTGACAGCACTGCCGTAGGTGCAGGGTGGCTCCGGTaGCACGCTGGCCTGGTAGTGCTTGAGGCATACGCGAAAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QHWRDSTAVGAGWLR*HAGLVVLEAYAKEG Trigger: ACCTTCTTTCGCGTATGCCTCAAGCACTACCAGGCCAGCGTGTCACCGGAGCCACCCTGCACCTACGGCAGTGCTGTCACGCCAGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 90 bp | CTTTCCAGCCAGGGTCGCACATCTTCTCCCCTCTGTCCCCGCAGGTaGAGTGGCCAAAGGCGTCATCCCGAGGTCGGCAGAACACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSQGRTSSPLCPRR*SGQRRHPEVGRTQS Trigger: GCTCTGTGTTCTGCCGACCTCGGGATGACGCCTTTGGCCACTTCACCTGCGGGGACAGAGGGGAGAAGATGTGCGACCCTGGCTGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 90 bp | CAGCAGTTGCGGTTCCCCAGCAGCCCCTTCTTGTTGACGAACTCCTaGAGCTTCAGCTCAAATACGCCGGAGCTCCAGACCTGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQLRFPSSPFLLTNS*SFSSNTPELQTWHS Trigger: GCTGTGCCAGGTCTGGAGCTCCGGCGTATTTGAGCTGAAGCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCTGGGGAACCGCAACTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014917.8 ENSMUST00000143460.2 |
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| CDS GCA 90 bp | ACCCAGGTCGGCAGGAACATGTGTAGCTCCCCTGGCCCGTGTTGGTaGAGGTGGCTCCATTCCTGCACGGCTTATGGTGAGTACAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TQVGRNMCSSPGPCW*RWLHSCTAYGEYSS Trigger: ACTACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTTCCTGCCGACCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS CCA 90 bp | TGTTGGTCATCACACCCTGGCAGACAGATTGGGTCAGTGCAGTACTaGCCTTTCCAGCCAGGGTCGCACATCTTCTCCCCTCTGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CWSSHPGRQIGSVQY*PFQPGSHIFSPLSP Trigger: CGGGGACAGAGGGGAGAAGATGTGCGACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTCCCAGCAGCCCCTTCTaGTTGACGAACTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSPSSPF*LTNSCS Trigger: GCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCTGGG...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | GTCGGCAGGAACATGTGTAGCTCCCCTGGCCCGTGTTGGTGCAGGTaGCTCCATTCCTGCACGGCTTATGGTGAGTACAGTAGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGRNMCSSPGPCWCR*LHSCTAYGEYSSSG Trigger: ACCTGAACTACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTTCCTGCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | TATACCCAGGTCGGCAGGAACATGTGTAGCTCCCCTGGCCCGTGTTaGTGCAGGTGGCTCCATTCCTGCACGGCTTATGGTGAGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTQVGRNMCSSPGPC*CRWLHSCTAYGEYS Trigger: ACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTTCCTGCCGACCTGGGTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTACCCTGGCAGACAGATaGGGTCAGTGCAGTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSTLADR*GQCSTG Trigger: GCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGT...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | ATCGCAGTAGCGGCCCTGCCAGCCAACTCTGCACTTGCACTCCCCTaGTTTGTCACAGTATCCATGTTGGTCATCACACCCTGGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IAVAALPANSALALP*FVTVSMLVITPWQT Trigger: TGTCTGCCAGGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGCAAGTGCAGAGTTGGCTGGCAGGGCCGCTACTGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 90 bp | GGGTATCGGACCTTAAAGCTGCTCTTCTCGGCTCCATGGTCCCCGTaGAAGTCCGCCTTCTTGTTGGTGTTCTTGATCTGGGTAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYRTLKLLFSAPWSP*KSAFLLVFLIWVAP Trigger: TGGGGCTACCCAGATCAAGAACACCAACAAGAAGGCGGACTTTCACGGGGACCATGGAGCCGAGAAGAGCAGCTTTAAGGTCCGATACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 90 bp | AGTAGTGCTCGTCACACACAAACCGGTAAGAGTACCGGAGGTCTGTaGGGCCGCTACTGTGAAGGTCCTGAGACCATTCTTCTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSARHTQTGKSTGGL*GRYCEGPETILLPQ Trigger: CTGTGGGAGAAGAATGGTCTCAGGACCTTCACAGTAGCGGCCGCACAGACCTCCGGTACTCTTACCGGTTTGTGTGTGACGAGCACTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 90 bp | AGTATCCATGTTGGTCATCACACCCTGGCAGACAGATTGGGTCAGTaGAGTACTGGCCTTTCCAGCCAGGGTCGCACATCTTCTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SIHVGHHTLADRLGQ*STGLSSQGRTSSPL Trigger: GAGGGGAGAAGATGTGCGACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | GCACTCCCCTGGTTTGTCACAGTATCCATGTTGGTCATCACACCCTaGCAGACAGATTGGGTCAGTGCAGTACTGGCCTTTCCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPWFVTVSMLVITP*QTDWVSAVLAFPAR Trigger: CCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTACAGTAGTTCAGGTCTaGGTTGCAGAAAAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSTVVQV*VAEKAP Trigger: GGGGGCCTTTTCTGCAACCAAGACCTGAACTACTGT...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCACTTCCAGCTCACAGTaGGCACCTGTATACCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LREPASPEPGSQQQSLGFTSSSQ*APVYPG Trigger: ACCTGGGTATACAGGTGCCAACTGTGAGCTGGAAGT...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 90 bp | ACCCCTAAGTGTTGGGGCGATCTTCTCTTCTCCTGCAGAGCTCTGTaGCTGGCACTTGGTGTCACGTTTGCTGTGTGTATCCCTGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: TPKCWGDLLFSCRAL*LALGVTFAVCIPDR Trigger: ACGGTCAGGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGATCGCCCCAACACTTAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | CTAAGTGTTGGGGCGATCTTCTCTTCTCCTGCAGAGCTCTGTGACTaGCACTTGGTGTCACGTTTGCTGTGTGTATCCCTGACCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVGAIFSSPAELCD*HLVSRLLCVSLTVA Trigger: AGCCACGGTCAGGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGATCGCCCCAACACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCAGCAGCCCCTTCTTGTaGACGAACTCCTGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FKATVHSAMGTTSRQSSGSSPFL*TNSCSF Trigger: GAAGCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCT...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCTTTCTGGGTTTTCTGTaGCGAGGTCATCGGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LREPASPEPGSQQQSLGFFLGFL*RGHRES Trigger: ACTCTCCCGATGACCTCGCAACAGAAAACCCAGAAA...GAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTTGCACTCCCCTGGTTaGTCACAGTATCCATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSLHSPG*SQYPCW Trigger: CCAACATGGATACTGTGACAAACCAGGGGAGTGCAA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 90 bp | CCTCTGTGTGGTCAGGCGGCTGATGAGTCTTTCTGGGTTTTCTGTTaGGAGGTCATCGGGAGAGTCTGTATGGAGGGCTTCAATGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCGQAADESFWVFC*EVIGRVCMEGFNDQ Trigger: CTGATCATTGAAGCCCTCCATACAGACTCTCCCGATGACCTCGCAACAGAAAACCCAGAAAGACTCATCAGCCGCCTGACCACACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | CCAACTCTGCACTTGCACTCCCCTGGTTTGTCACAGTATCCATGTTaGTCATCACACCCTGGCAGACAGATTGGGTCAGTGCAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLHLHSPGLSQYPC*SSHPGRQIGSVQYW Trigger: CCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGCAAGTGCAGAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGCAGCCAACTCTGCACTaGCACTCCCCTGGTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAQPTLH*HSPGLS Trigger: TGACAAACCAGGGGAGTGCAAGTGCAGAGTTGGCTG...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | GAGAACCAGCTTCGCCTGAACCTGGTTCTCAGCAGCAGTCCCTGGGTTTCCTCTTTCTTGTTGGTGTTCTaGATCTGGGTAGCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ENQLRLNLVLSSSPWVSSFLLVF*IWVAPM Trigger: CATTGGGGCTACCCAGATCAAGAACACCAACAAGAA...AGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 90 bp | ATCTGGGTAGCCCCAATGATGCTAACAGAAACGTCCTTCTCGCGCTaGCAATTGGCTAGGTTGTTCATGGTTTCTGTCTCTCCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IWVAPMMLTETSFSR*QLARLFMVSVSPPQ Trigger: CTGTGGGGGAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCATTGGGGCTACCCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGAACATCGTCCTCCATaGAAGCAAGGGCCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKQLSIVQWEQPAGSPAEHRPP*KQGPSA Trigger: TGCAGATGGCCCTTGCTTCAATGGAGGACGATGTTC...CGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCTTCTCGCGCTGGCAATaGGCTAGGTTGTTCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FKATVHSAMGTTSRQSSGFSRWQ*ARLFMV Trigger: AACCATGAACAACCTAGCCAATTGCCAGCGCGAGAA...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS CCA 90 bp | AGTCTTTCTGGGTTTTCTGTTGCGAGGTCATCGGGAGAGTCTGTATaGAGGGCTTCAATGATCAGAGAGAAGGTACCTGGCCAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSGFSVARSSGESV*RASMIREKVPGQVK Trigger: CTTCACCTGGCCAGGTACCTTCTCTCTGATCATTGAAGCCCTCCATACAGACTCTCCCGATGACCTCGCAACAGAAAACCCAGAAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCATCTTCTTCTCACAGTaGAAGCCAGAGAAGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKATVHSAMGTTSRQSSGIFFSQ*KPEKPK Trigger: CTTGGGCTTCTCTGGCTTCAACTGTGAGAAGAAGAT...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCTACACCGACTGGTACTaGGTGTCCTTTGAAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKATVHSAMGTTSRQSSGYTDWY*VSFEVE Trigger: CTCTACTTCAAAGGACACCAAGTACCAGTCGGTGTA...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGGCAGTCCAGCGGCTGGCAATTGGCTAGGTaGTTCATGGTTTCTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FKATVHSAMGTTSRQSSGWQLAR*FMVSVS Trigger: AGAGACAGAAACCATGAACAACCTAGCCAATTGCCA...GCCGCTGGACTGCCTGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACTCCCCTGGCCCGTGTaGGTGCAGGTGGCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LNIYSSKQLSIVQWEQPALPWPV*VQVAPF Trigger: GAATGGAGCCACCTGCACCAACACGGGCCAGGGGAG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCAGTTACACTGCCAGGGTaGCTGGCAGGTGCCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAVTLPG*LAGAME Trigger: CTCCATGGCACCTGCCAGCAACCCTGGCAGTGTAAC...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACCGAGGTCCACACACTaGGCACCGTTAGAACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAPRSTH*APLEQG Trigger: CCCTTGTTCTAACGGTGCCAAGTGTGTGGACCTCGG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TCCCTTCCTCTCTCAGCAGCATTCATCGGGGCTATATCCTTGGAATTTTATTTAAAGTCCGCCTTCTTGTaGGTGTTCTTGATCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: SLPLSAAFIGAISLEFYLKSAFL*VFLIWV Trigger: TACCCAGATCAAGAACACCAACAAGAAGGCGGACTT...TAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCTGAGAGAGGAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACACTTGGTGTCACGTTaGCTGTGTGTATCCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: LNIYSSKQLSIVQWEQPAHLVSR*LCVSLT Trigger: GGTCAGGGATACACACAGCAAACGTGACACCAAGTG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS-3UTR CAA 90 bp | TTAAATATATACTCTTCAAAGCAACTGTCCATAGTGCAATGGGAACAACCAGCACTCTGTGACTGGCACTaGGTGTCACGTTTGCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LNIYSSKQLSIVQWEQPALCDWH*VSRLLC Trigger: ACACAGCAAACGTGACACCAAGTGCCAGTCACAGAG...TGCTGGTTGTTCCCATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | GGAAGGGCCCGCCCTGGCTCTCCATATGCCTCTCACTaGGGTCCACCACCATGGGCCCTGGTGGTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GRARPGSPYASH*GPPPWALVVAQ Trigger: CTGAGCCACCACCAGGGCCCATGGTGGTGGACCTCAGTGAGAGGCATATGGAGAGCCAGGGCGGGCCCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | CGTGACAGCACTGCCGTAGGTGCAGGGTGGCTCCGGTaGCACGCTGGCCTGGTAGTGCTTGAGGCATACGCG | + |
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Preference number: 6 (lower is better) Translates to: RDSTAVGAGWLR*HAGLVVLEAYA Trigger: CGCGTATGCCTCAAGCACTACCAGGCCAGCGTGTCACCGGAGCCACCCTGCACCTACGGCAGTGCTGTCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GCCATCAGGCAGGCTGAAGGAGTCGACACCCAGCACTaGCGTGACAGCACTGCCGTAGGTGCAGGGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AIRQAEGVDTQH*RDSTAVGAGWL Trigger: GAGCCACCCTGCACCTACGGCAGTGCTGTCACGCCAGTGCTGGGTGTCGACTCCTTCAGCCTGCCTGATGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 90 bp | CAGGTGCCCCCATTTGCACACGGGGAGGAGGCACAGTCATCCACATaGTCCTCGCAGTACCTCCCGGAGAAGCCAGCCTGGCACCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QVPPFAHGEEAQSST*SSQYLPEKPAWHRH Trigger: GTGCCGGTGCCAGGCTGGCTTCTCCGGGAGGTACTGCGAGGACAATGTGGATGACTGTGCCTCCTCCCCGTGTGCAAATGGGGGCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | CAGGGTCGCACATCTTCTCCCCTCTGTCCCCGCAGGTaGAGTGGCCAAAGGCGTCATCCCGAGGTCGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QGRTSSPLCPRR*SGQRRHPEVGR Trigger: TCTGCCGACCTCGGGATGACGCCTTTGGCCACTTCACCTGCGGGGACAGAGGGGAGAAGATGTGCGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | AGGGTGGCTCCGGTGACACGCTGGCCTGGTAGTGCTTaGGGCATACGCGAAAGAAGGTCCTGCAGGCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RVAPVTRWPGSA*GIRERRSCRRK Trigger: CTTGCGCCTGCAGGACCTTCTTTCGCGTATGCCTCAAGCACTACCAGGCCAGCGTGTCACCGGAGCCACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | TGGCCCCATTATGGCAGGGTGCATGCTCACACCTGCTaGCAGGGGCGCTGCAGTTCTTGCCCGTGTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: WPHYGRVHAHTC*QGRCSSCPCSQ Trigger: CTGGCTACACGGGCAAGAACTGCAGCGCCCCTGTCAGCAGGTGTGAGCATGCACCCTGCCATAATGGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | CTGCCAGGGTTGCTGGCAGGTGCCATGGAGACAACCTaGGTATCGGATGCACTCATCGCAGTAGCGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LPGLLAGAMETT*VSDALIAVAAL Trigger: CAGGGCCGCTACTGCGATGAGTGCATCCGATACCCAGGTTGTCTCCATGGCACCTGCCAGCAACCCTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | ACTCACACATGTAGCGCTGGCCCCTCTGGTGGCAGGTaGCCCCATTATGGCAGGGTGCATGCTCACACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: THTCSAGPSGGR*PHYGRVHAHTC Trigger: GCAGGTGTGAGCATGCACCCTGCCATAATGGGGCCACCTGCCACCAGAGGGGCCAGCGCTACATGTGTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | GGCAGGAACATGTGTAGCTCCCCTGGCCCGTGTTGGTaGAGGTGGCTCCATTCCTGCACGGCTTATGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GRNMCSSPGPCW*RWLHSCTAYGE Trigger: CTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | TCGCACATCTTCTCCCCTCTGTCCCCGCAGGTGAAGTaGCCAAAGGCGTCATCCCGAGGTCGGCAGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: SHIFSPLSPQVK*PKASSRGRQNT Trigger: TGTGTTCTGCCGACCTCGGGATGACGCCTTTGGCCACTTCACCTGCGGGGACAGAGGGGAGAAGATGTGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GTCGGCAGGAACATGTGTAGCTCCCCTGGCCCGTGTTaGTGCAGGTGGCTCCATTCCTGCACGGCTTATGGT | + |
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Preference number: 6 (lower is better) Translates to: VGRNMCSSPGPC*CRWLHSCTAYG Trigger: ACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTTCCTGCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | CCATTTGCACACGGGGAGGAGGCACAGTCATCCACATaGTCCTCGCAGTACCTCCCGGAGAAGCCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PFAHGEEAQSST*SSQYLPEKPAW Trigger: CCAGGCTGGCTTCTCCGGGAGGTACTGCGAGGACAATGTGGATGACTGTGCCTCCTCCCCGTGTGCAAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | AGGTACAGGAGAAGTCGTTCACACTGTCCCGGCAGGTaGCCCCATTTGCACACGGGGAGGAGGCACAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: RYRRSRSHCPGR*PHLHTGRRHSH Trigger: ATGACTGTGCCTCCTCCCCGTGTGCAAATGGGGGCACCTGCCGGGACAGTGTGAACGACTTCTCCTGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GTTTCTGTCTCTCCCCCACAGGGTTCAGGTGGAGGCTaGTGTTTCTGTAGCTTCAGCCGGACGCAGACCACC | + |
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Preference number: 6 (lower is better) Translates to: VSVSPPQGSGGG*CFCSFSRTQTT Trigger: GGTGGTCTGCGTCCGGCTGAAGCTACAGAAACACCAGCCTCCACCTGAACCCTGTGGGGGAGAGACAGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GCGGCCCTGCCAGCCAACTCTGCACTTGCACTCCCCTaGTTTGTCACAGTATCCATGTTGGTCATCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: AALPANSALALP*FVTVSMLVITP Trigger: GGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGCAAGTGCAGAGTTGGCTGGCAGGGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | GGGGCAATGGCAGGTGTAGCCTCCGTCAGGGTTATCTaGACATCGTCCTCCATTGAAGCAAGGGCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: GAMAGVASVRVI*TSSSIEARAIC Trigger: GCAGATGGCCCTTGCTTCAATGGAGGACGATGTTCAGATAACCCTGACGGAGGCTACACCTGCCATTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | GTTGGTCATCACACCCTGGCAGACAGATTGGGTCAGTaGAGTACTGGCCTTTCCAGCCAGGGTCGCACATCT | + |
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Preference number: 6 (lower is better) Translates to: VGHHTLADRLGQ*STGLSSQGRTS Trigger: AGATGTGCGACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | CTTCCTGGCAGTTACACTGCCAGGGTTGCTGGCAGGTaGCATGGAGACAACCTGGGTATCGGATGCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: LPGSYTARVAGR*HGDNLGIGCTH Trigger: ATGAGTGCATCCGATACCCAGGTTGTCTCCATGGCACCTGCCAGCAACCCTGGCAGTGTAACTGCCAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | TCCCCTGGCCCGTGTTGGTGCAGGTGGCTCCATTCCTaGACGGCTTATGGTGAGTACAGTAGTTCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPGPCWCRWLHS*TAYGEYSSSGL Trigger: AAGACCTGAACTACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | AACATGTGTAGCTCCCCTGGCCCGTGTTGGTGCAGGTaGCTCCATTCCTGCACGGCTTATGGTGAGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: NMCSSPGPCWCR*LHSCTAYGEYS Trigger: ACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCAACACGGGCCAGGGGAGCTACACATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | AGCCTCCGTCAGGGTTATCTGAACATCGTCCTCCATTaGAGCAAGGGCCATCTGCACAGGTCATGGCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLRQGYLNIVLH*SKGHLHRSWRS Trigger: TGAGCGCCATGACCTGTGCAGATGGCCCTTGCTTCAATGGAGGACGATGTTCAGATAACCCTGACGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | CGTCACACACAAACCGGTAAGAGTACCGGAGGTCTGTaGGGCCGCTACTGTGAAGGTCCTGAGACCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: RHTQTGKSTGGL*GRYCEGPETIL Trigger: AAGAATGGTCTCAGGACCTTCACAGTAGCGGCCGCACAGACCTCCGGTACTCTTACCGGTTTGTGTGTGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GTATCCATGTTGGTCATCACACCCTGGCAGACAGATTaGGTCAGTGCAGTACTGGCCTTTCCAGCCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSMLVITPWQTD*VSAVLAFPARV Trigger: GACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GGGGCGATCTTCTCTTCTCCTGCAGAGCTCTGTGACTaGCACTTGGTGTCACGTTTGCTGTGTGTATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAIFSSPAELCD*HLVSRLLCVSL Trigger: CAGGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGATCGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | GGGCTAGGAGCACACTCATCTACTTCCAGCTCACAGTaGGCACCTGTATACCCAGGTCGGCAGGAACATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLGAHSSTSSSQ*APVYPGRQEHV Trigger: CACATGTTCCTGCCGACCTGGGTATACAGGTGCCAACTGTGAGCTGGAAGTAGATGAGTGTGCTCCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | AGTATCCATGTTGGTCATCACACCCTGGCAGACAGATaGGGTCAGTGCAGTACTGGCCTTTCCAGCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SIHVGHHTLADR*GQCSTGLSSQG Trigger: ACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 90 bp | GCCAACTCTGCACTTGCACTCCCCTGGTTTGTCACAGTATCCATGTaGGTCATCACACCCTGGCAGACAGATTGGGTCAGTGCAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: ANSALALPWFVTVSM*VITPWQTDWVSAVL Trigger: CAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGCAAGTGCAGAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 90 bp | ATGATGCTAACAGAAACGTCCTTCTCGCGCTGGCAATTGGCTAGGTaGTTCATGGTTTCTGTCTCTCCCCCACAGGGTTCAGGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MMLTETSFSRWQLAR*FMVSVSPPQGSGGG Trigger: GCCTCCACCTGAACCCTGTGGGGGAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | ACCTTAAAGCTGCTCTTCTCGGCTCCATGGTCCCCGTaGAAGTCCGCCTTCTTGTTGGTGTTCTTGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLKLLFSAPWSP*KSAFLLVFLIW Trigger: CCAGATCAAGAACACCAACAAGAAGGCGGACTTTCACGGGGACCATGGAGCCGAGAAGAGCAGCTTTAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS TCA 72 bp | TGTTGGGGCGATCTTCTCTTCTCCTGCAGAGCTCTGTaGCTGGCACTTGGTGTCACGTTTGCTGTGTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: CWGDLLFSCRAL*LALGVTFAVCI Trigger: GATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGATCGCCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GGGTTTTCTGTTGCGAGGTCATCGGGAGAGTCTGTATaGAGGGCTTCAATGATCAGAGAGAAGGTACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GFSVARSSGESV*RASMIREKVPG Trigger: GCCAGGTACCTTCTCTCTGATCATTGAAGCCCTCCATACAGACTCTCCCGATGACCTCGCAACAGAAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | GCACTTGCACTCCCCTGGTTTGTCACAGTATCCATGTaGGTCATCACACCCTGGCAGACAGATTGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALALPWFVTVSM*VITPWQTDWVS Trigger: ACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGATACTGTGACAAACCAGGGGAGTGCAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | ACAGAAACGTCCTTCTCGCGCTGGCAATTGGCTAGGTaGTTCATGGTTTCTGTCTCTCCCCCACAGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TETSFSRWQLAR*FMVSVSPPQGS Trigger: TGAACCCTGTGGGGGAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | ATCTTCTCTTCTCCTGCAGAGCTCTGTGACTGGCACTaGGTGTCACGTTTGCTGTGTGTATCCCTGACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: IFSSPAELCDWH*VSRLLCVSLTV Trigger: CACGGTCAGGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 90 bp | GTAGCCCCAATGATGCTAACAGAAACGTCCTTCTCGCGCTGGCAATaGGCTAGGTTGTTCATGGTTTCTGTCTCTCCCCCACAGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VAPMMLTETSFSRWQ*ARLFMVSVSPPQGS Trigger: TGAACCCTGTGGGGGAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCATTGGGGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CCA 72 bp | GCCCCAATGATGCTAACAGAAACGTCCTTCTCGCGCTaGCAATTGGCTAGGTTGTTCATGGTTTCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: APMMLTETSFSR*QLARLFMVSVS Trigger: AGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCATTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS CAA 72 bp | ATGATGCTAACAGAAACGTCCTTCTCGCGCTGGCAATaGGCTAGGTTGTTCATGGTTTCTGTCTCTCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MMLTETSFSRWQ*ARLFMVSVSPP Trigger: TGGGGGAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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| CDS GCA 72 bp | TTACACCTCAGTCGCTATAACACACTCATCCTTTTCTaGAGACAGAACATACACCGACTGGTACTTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLSRYNTLILF*RQNIHRLVLGV Trigger: GACACCAAGTACCAGTCGGTGTATGTTCTGTCTGCAGAAAAGGATGAGTGTGTTATAGCGACTGAGGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014917.8 |
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