Pregenerated sensors for DLK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040856Ensembl transcript IDs: ENSMUST00000056110.15, ENSMUST00000109841.9, ENSMUST00000109842.9, ENSMUST00000109843.8, ENSMUST00000109844.11, ENSMUST00000109846.11, ENSMUST00000124293.3, ENSMUST00000173539.8, ENSMUST00000173812.2
Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGTTGGAGGTGGGGGAATCTCGCCAAGGGTCACACAGCGAGTaGGCAGCTGGGTTAGGACTAGGTCCCGACCTCTCTGCCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PGLEVGESRQGSHSE*AAGLGLGPDLSASS Trigger: GCTGCTGGCAGAGAGGTCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTGTGTGACCCTTGGCGAGATTCCCCCACCTCCAACCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR GCA 90 bp | ACACAGCGAGTGCGCAGCTGGGTTAGGACTAGGTCCCGACCTCTCTaGCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCACACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TQRVRSWVRTRSRPL*QQPTWGLSLPGTQP Trigger: TGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR CCA 90 bp | AGCTGGGTTAGGACTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTaGGGTCTCTCTCTGCCTGGCACACAGCCACTACACACTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SWVRTRSRPLCQQPT*GLSLPGTQPLHTAE Trigger: CTCTGCAGTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAGTCCTAACCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR GCA 90 bp | TTGGCTTCCTGGGGGCACATGCATGTCTACTCCCCTCCCAGACTATaGCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGC | + |
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Preference number: 1 (lower is better) Translates to: LASWGHMHVYSPPRL*PSACTSHSSKNTHC Trigger: GCAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGAGGGGAGTAGACATGCATGTGCCCCCAGGAAGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR GCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTaGCTGGCACACAGCCACTACACACTGCAGAGTCACAATCAATCG | + |
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Preference number: 1 (lower is better) Translates to: LGPDLSASSQPGVSL*LAHSHYTLQSHNQS Trigger: CGATTGATTGTGACTCTGCAGTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR GCA 90 bp | GGGCACATGCATGTCTACTCCCCTCCCAGACTATGCCCCTCGGCCTaGACATCCCACAGCTCCAAGAACACTCACTGCCTTACACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GHMHVYSPPRLCPSA*TSHSSKNTHCLTLC Trigger: GCAGAGTGTAAGGCAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGAGGGGAGTAGACATGCATGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR GCA 90 bp | CTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTaGCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: LCPSACTSHSSKNTH*LTLCRCLETLPGWM Trigger: CATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR CCA 90 bp | GTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTaGCACACAGCCACTACACACTGCAGAGTCACAATCAATCGGAAA | + |
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Preference number: 1 (lower is better) Translates to: VPTSLPAANLGSLSA*HTATTHCRVTINRK Trigger: TTTCCGATTGATTGTGACTCTGCAGTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR TCA 90 bp | CGCCTCATTGATGTTGGTTTCTTGATCTTTGGTCACGTTGGAAGGTaGGGTGGTGGCACTCTGAGGGAGGCACCTGCTCTGGACCATCCG | + |
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Preference number: 1 (lower is better) Translates to: RLIDVGFLIFGHVGR*GGGTLREAPALDHP Trigger: CGGATGGTCCAGAGCAGGTGCCTCCCTCAGAGTGCCACCACCTCACCTTCCAACGTGACCAAAGATCAAGAAACCAACATCAATGAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR TCA 90 bp | CTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGTGGATaGTGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCG | + |
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Preference number: 1 (lower is better) Translates to: LCRCLETLPGWMDGG*WIFWMEEELLREQP Trigger: CGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR TCA 90 bp | ACTGCAAACGCTGCTCCTGTTGTGTGGGTGGATGCCGTGGAATTTTaGCGGGGCCGCCTCATTGATGTTGGTTTCTTGATCTTTGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: TANAAPVVWVDAVEF*RGRLIDVGFLIFGH Trigger: GTGACCAAAGATCAAGAAACCAACATCAATGAGGCGGCCCCGTCAAAATTCCACGGCATCCACCCACACAACAGGAGCAGCGTTTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR CCA 90 bp | CCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATaGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: PYTLQVLGNTPWLDG*WMMDLLDGGGVAKR Trigger: TCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR CCA 90 bp | TACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGTaGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: YTLQVLGNTPWLDGW*MMDLLDGGGVAKRT Trigger: TGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR CCA 90 bp | CATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATaGCACACAGCAACACAAGACAATATATGTAAGCATAGCGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: HALIGRKGFLDSVVA*HTATQDNICKHSVH Trigger: GTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGAGGTGGTGGCACTCTaGGGGAGGCACCTGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVEVVAL*GRHLLW Trigger: CCAGAGCAGGTGCCTCCCTCAGAGTGCCACCACCTC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGGCCCAGGGTTGGAGGTaGGGGAATCTCGCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLAQGWR*GNLAKG Trigger: ACCCTTGGCGAGATTCCCCCACCTCCAACCCTGGGC...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTAGGTCCCGACCTCTCTaGCAGCAGCCAACCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVRSRPL*QQPTWG Trigger: ACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCT...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTGGTGGGGGCTGCATTaGTCACTCAGATTCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: RAPFIRRDTETRLLSTTGWWGLH*SLRFCP Trigger: CGGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTTCCCCTCCCAGACTATaGCCCTCGGCCTGCACATCC | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVSPPRL*PSACTS Trigger: GGATGTGCAGGCCGAGGGGCATAGTCTGGGAGGGGA...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGCAGCGAGTGCGCAGCTaGGTTAGGACTAGGTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLQRVRS*VRTRSR Trigger: TCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTG...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGCCCAGGGTTGGAGGTaGGGGAATCTCGCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVAQGWR*GNLAKG Trigger: ACCCTTGGCGAGATTCCCCCACCTCCAACCCTGGGC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGGTTTCAGGGTGGGACTaGAAGGGGCTTGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RAPFIRRDTETRLLSTTGVSGWD*KGLGLK Trigger: CTTCAGCCCAAGCCCCTTCCAGTCCCACCCTGAAAC...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTTGCCTGCCCTGTGCTTaGCTTCCTGGGGGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVCLPCA*LPGGTC Trigger: GCATGTGCCCCCAGGAAGCCAAGCACAGGGCAGGCA...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTTCCCAAACTGGACATaGGCCAGGAGGCTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: RAPFIRRDTETRLLSTTGFPNWT*ARRLPI Trigger: AATGGGGAGCCTCCTGGCTCATGTCCAGTTTGGGAA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCAACAGCCACTACACACTaGAGAGTCACAATCAATCGG | + |
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Preference number: 2 (lower is better) Translates to: LGPDLSASSQPGVSLCLATATTH*RVTINR Trigger: CCGATTGATTGTGACTCTGCAGTGTGTAGTGGCTGT...TGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTCTTCCTGGGGGCACATaGATGTCTACTCCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVLPGGT*MSTPLP Trigger: TGGGAGGGGAGTAGACATGCATGTGCCCCCAGGAAG...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGAAGTGGCCCAGGGTTaGAGGTGGGGGAATCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: THCLTLCRCLETLPGWMDEVAQG*RWGNLA Trigger: GGCGAGATTCCCCCACCTCCAACCCTGGGCCACTTC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGGTACATCCATGGCTGTaGACAGCTGCTTTCCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RAPFIRRDTETRLLSTTGVHPWL*TAAFPL Trigger: AAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTAC...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGACACCCTCATCAGGATaGGGCTGGGGCCAAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLTPSSG*GWGQMG Trigger: CCCCATTTGGCCCCAGCCTCATCCTGATGAGGGTGT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCAACAAAAAGCGCAGACTaGGTAGAGAGCTCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LGPDLSASSQPGVSLCLATKSAD*VESSKE Trigger: TTCCTTAGAGCTCTCTACGCAGTCTGCGCTTTTTGT...TGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGCCTGGGGTCTCTCTCTaGCTGGCACACAGCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLPGVSL*LAHSHY Trigger: GTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGG...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGATGGCTGTGGACAGCTaGTTTCCCGCTTTTGCTACA | + |
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Preference number: 2 (lower is better) Translates to: RAPFIRRDTETRLLSTTGMAVDS*FPAFAT Trigger: TGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCAT...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGTGCCAGCAGCCAACCTaGGGTCTCTCTCTGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGCQQPT*GLSLPG Trigger: GCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCA...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTCATGAGGTGGAGTCTTaGGCTAGGGTAGGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVHEVES*ARVGNG Trigger: CCCATTCCCTACCCTAGCCCAAGACTCCACCTCATG...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGGTCTCTCTCTGCCTaGCACACAGCCACTACACAC | + |
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Preference number: 2 (lower is better) Translates to: THCLTLCRCLETLPGWMDGSLSA*HTATTH Trigger: GTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGTTTCAGGGTGGGACTaGAAGGGGCTTGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLVSGWD*KGLGLK Trigger: CTTCAGCCCAAGCCCCTTCCAGTCCCACCCTGAAAC...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGAGGTGGTGGAGATTTaGGGAGCTGGGACACACCCT | + |
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Preference number: 2 (lower is better) Translates to: THCLTLCRCLETLPGWMDEVVEI*GAGTHP Trigger: AGGGTGTGTCCCAGCTCCCCAAATCTCCACCACCTC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGACATGGGAGGTGGTaGAGATTTGGGGAGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: THCLTLCRCLETLPGWMDGHGRW*RFGELG Trigger: TCCCAGCTCCCCAAATCTCCACCACCTCCCATGTCC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGCATGAGGTGGAGTCTTaGGCTAGGGTAGGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLHEVES*ARVGNG Trigger: CCCATTCCCTACCCTAGCCCAAGACTCCACCTCATG...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATCATGAGGTGGAGTCTTaGGCTAGGGTAGGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: THCLTLCRCLETLPGWMDHEVES*ARVGNG Trigger: CCCATTCCCTACCCTAGCCCAAGACTCCACCTCATG...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGGTTTCAGGGTGGGACTaGAAGGGGCTTGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGVSGWD*KGLGLK Trigger: CTTCAGCCCAAGCCCCTTCCAGTCCCACCCTGAAAC...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTCCCTGGCTGGATGGATaGTGGATGATGGATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVPWLDG*WMMDLL Trigger: CAAAAGATCCATCATCCACCATCCATCCAGCCAGGG...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGGGGCTTTGGGTGAAATaGACCTGGGGTAGAGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGGLWVK*TWGRGW Trigger: CCAACCTCTACCCCAGGTTCATTTCACCCAAAGCCC...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACGGGTCTCTCTCTGCCTaGCACACAGCCACTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHGSLSA*HTATTH Trigger: GTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCC...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGCAGCGAGTGCGCAGCTaGGTTAGGACTAGGTCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRQRVRS*VRTRSR Trigger: TCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTG...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGAGCCTGTGCAAACCTTaGTGGGGGCTGCATTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGSLCKP*WGLHCS Trigger: TGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCT...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGAGCTGGCTAGGTGTTTaGGGATCTGAGGGTCCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLSWLGV*GSEGPN Trigger: GTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGTGGCTGGATGGATGGTaGATGATGGATCTTTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLWLDGW*MMDLLD Trigger: ATCCAAAAGATCCATCATCCACCATCCATCCAGCCA...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACTTCCCAAACTGGACATaGGCCAGGAGGCTCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHFPNWT*ARRLPI Trigger: AATGGGGAGCCTCCTGGCTCATGTCCAGTTTGGGAA...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGGTCTCTCTCTGCCTaGCACACAGCCACTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGSLSA*HTATTH Trigger: GTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGACATGGGAGGTGGTaGAGATTTGGGGAGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGHGRW*RFGELG Trigger: TCCCAGCTCCCCAAATCTCCACCACCTCCCATGTCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGGCTTTGGGTGAAATaGACCTGGGGTAGAGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGLWVK*TWGRGW Trigger: CCAACCTCTACCCCAGGTTCATTTCACCCAAAGCCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTATCAGGTCCTACTCTTaGAGTCAAGAAGTGTTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVIRSYS*SQEVFW Trigger: CCAAAACACTTCTTGACTCCAAGAGTAGGACCTGAT...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGAGCCTGTGCAAACCTTaGTGGGGGCTGCATTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRSLCKP*WGLHCS Trigger: TGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCT...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGACAGCCACTACACACTaGAGAGTCACAATCAATCGG | + |
|
Preference number: 2 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGTATTH*RVTINR Trigger: CCGATTGATTGTGACTCTGCAGTGTGTAGTGGCTGT...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGACGGTGACAATGACTTaGAAGCAAGTACTCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLTVTMT*KQVLRA Trigger: TGCTCTGAGTACTTGCTTGCAAGTCATTGTCACCGT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACTGCCAGCAGCCAACCTaGGGTCTCTCTCTGCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHCQQPT*GLSLPG Trigger: GCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCA...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTAGAGGCAACACCAAATaGCACATTTTTGACCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: DPFCGREDQGETANAAPVRGNTK*HIFDLK Trigger: CTTTAGGTCAAAAATGTGCCATTTGGTGTTGCCTCT...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGAGCTGGCTAGGTGTTTaGGGATCTGAGGGTCCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRSWLGV*GSEGPN Trigger: GTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCT...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACCAGCGAGTGCGCAGCTaGGTTAGGACTAGGTCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHQRVRS*VRTRSR Trigger: TCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTG...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCAGAGGCAACACCAAATaGCACATTTTTGACCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKPVQTLVGAALLTQILPRGNTK*HIFDLK Trigger: CTTTAGGTCAAAAATGTGCCATTTGGTGTTGCCTCT...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGTAATGAATGACCAATaGCTGGGGAGAGATTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLVMNDQ*LGRDSL Trigger: CAAAGAATCTCTCCCCAGCCATTGGTCATTCATTAC...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAACAAAAAGCGCAGACTaGGTAGAGAGCTCTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRTKSAD*VESSKE Trigger: TTCCTTAGAGCTCTCTACGCAGTCTGCGCTTTTTGT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAAGGTACACTGAAGTCTaGAAGCACATCTCTACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRRYTEV*KHISTL Trigger: TAGAGTAGAGATGTGCTTTCAGACTTCAGTGTACCT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACAGGTACACTGAAGTCTaGAAGCACATCTCTACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHRYTEV*KHISTL Trigger: TAGAGTAGAGATGTGCTTTCAGACTTCAGTGTACCT...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGAGCCTGTGCAAACCTTaGTGGGGGCTGCATTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRSLCKP*WGLHCS Trigger: TGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCT...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACGCTTCCACGGAGTTTTaGGTTTTTGCCTGCCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHASTEF*VFACPV Trigger: CACAGGGCAGGCAAAAACCCAAAACTCCGTGGAAGC...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACCACAGGAGATGTGTATaGGCAGCCAGAGATCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHHRRCV*AARDLM Trigger: CATCAGATCTCTGGCTGCCCATACACATCTCCTGTG...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGACAAAGGTACATCCATaGCTGTGGACAGCTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRTKVHP*LWTAAF Trigger: GAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGT...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCACAAAAAGCGCAGACTaGGTAGAGAGCTCTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NICKHSVHSIPHNRANSTTKSAD*VESSKE Trigger: TTCCTTAGAGCTCTCTACGCAGTCTGCGCTTTTTGT...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGGAAAGATCTAAGGGTTaGGGTGTGAGACTTGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRERSKG*GVRLDV Trigger: CACATCAAGTCTCACACCGCAACCCTTAGATCTTTC...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACAGGTACACTGAAGTCTaGAAGCACATCTCTACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHRYTEV*KHISTL Trigger: TAGAGTAGAGATGTGCTTTCAGACTTCAGTGTACCT...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATACAAAAAGCGCAGACTaGGTAGAGAGCTCTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TATQDNICKHSVHSIPHNTKSAD*VESSKE Trigger: TTCCTTAGAGCTCTCTACGCAGTCTGCGCTTTTTGT...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACTTGATGTTGGTTTCTTaGTCTTTGGTCACGTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHLMLVS*SLVTLE Trigger: TTCCAACGTGACCAAAGATCAAGAAACCAACATCAA...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACGAACTCAAAATGAGATaGGATAATGAGGTGATTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHELKMR*DNEVIV Trigger: CACAATCACCTCATTATCCCATCTCATTTTGAGTTC...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACAGTCAAGAAGTGTTTTaGTATATATCCATCGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RKSALVDISLTFWLQNYHSQEVF*YISIVP Trigger: AGGAACGATGGATATATACCAAAACACTTCTTGACT...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | GTGCGCAGCTGGGTTAGGACTAGGTCCCGACCTCTCTaGCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VRSWVRTRSRPL*QQPTWGLSLPG Trigger: GCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAGTCCTAACCCAGCTGCGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | GAGGTGGGGGAATCTCGCCAAGGGTCACACAGCGAGTaGGCAGCTGGGTTAGGACTAGGTCCCGACCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EVGESRQGSHSE*AAGLGLGPDLS Trigger: AGAGAGGTCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTGTGTGACCCTTGGCGAGATTCCCCCACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | AGGACTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTaGGGTCTCTCTCTGCCTGGCACACAGCCACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: RTRSRPLCQQPT*GLSLPGTQPLH Trigger: GTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | GGAATCTCGCCAAGGGTCACACAGCGAGTGCGCAGCTaGGTTAGGACTAGGTCCCGACCTCTCTGCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GISPRVTQRVRS*VRTRSRPLCQQ Trigger: CTGCTGGCAGAGAGGTCGGGACCTAGTCCTAACCCAGCTGCGCACTCGCTGTGTGACCCTTGGCGAGATTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | GGAAGAGGGGCTAGGAGGCAGGGACATGGGAGGTGGTaGAGATTTGGGGAGCTGGGACACACCCTCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRGARRQGHGRW*RFGELGHTLIR Trigger: CCTGATGAGGGTGTGTCCCAGCTCCCCAAATCTCCACCACCTCCCATGTCCCTGCCTCCTAGCCCCTCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | GACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTaGCTGGCACACAGCCACTACACACTGCAGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DLSASSQPGVSL*LAHSHYTLQSH Trigger: GTGACTCTGCAGTGTGTAGTGGCTGTGTGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | TGGGGGCACATGCATGTCTACTCCCCTCCCAGACTATaGCCCTCGGCCTGCACATCCCACAGCTCCAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WGHMHVYSPPRL*PSACTSHSSKN Trigger: GTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGAGGGGAGTAGACATGCATGTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGGAGGTGGTGGAGATTaGGGGAGCTGGGACACACCC | + |
|
Preference number: 3 (lower is better) Translates to: DPFCGREDQGETANAAPVGGGGD*GSWDTP Trigger: GGGTGTGTCCCAGCTCCCCAAATCTCCACCACCTCC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR TCA 72 bp | TCTTTGGTCACGTTGGAAGGTGAGGTGGTGGCACTCTaGGGGAGGCACCTGCTCTGGACCATCCGGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLVTLEGEVVAL*GRHLLWTIRLP Trigger: TGGAAGCCGGATGGTCCAGAGCAGGTGCCTCCCTCAGAGTGCCACCACCTCACCTTCCAACGTGACCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGTGGATGGAGGAGGAGTaGCTAAGAGAACAGCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLWMEEE*LREQPG Trigger: GCCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCA...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGAGGTGGTGGAGATTaGGGGAGCTGGGACACACCC | + |
|
Preference number: 3 (lower is better) Translates to: THCLTLCRCLETLPGWMDGGGGD*GSWDTP Trigger: GGGTGTGTCCCAGCTCCCCAAATCTCCACCACCTCC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | AGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTaGCTCAGGGCGGGACTGATTGAGGCAGGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RWDNEVIVMGLV*LRAGLIEAGEG Trigger: CCCCTCCCCTGCCTCAATCAGTCCCGCCCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | CATGTCTACTCCCCTCCCAGACTATGCCCCTCGGCCTaGACATCCCACAGCTCCAAGAACACTCACTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HVYSPPRLCPSA*TSHSSKNTHCL Trigger: AAGGCAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGAGGGGAGTAGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAGGAAGTGGCCCAGGGTaGGAGGTGGGGGAATCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRGSGPG*EVGESR Trigger: GCGAGATTCCCCCACCTCCAACCCTGGGCCACTTCC...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGAAGCCTGTGCAAACCTaGGTGGGGGCTGCATTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLKPVQT*VGAALL Trigger: GAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATAAGCCTGTGCAAACCTaGGTGGGGGCTGCATTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: THCLTLCRCLETLPGWMDKPVQT*VGAALL Trigger: GAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTT...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | TCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTaGCTTACACTCTGCAGGTGCTTGGAAACACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SACTSHSSKNTH*LTLCRCLETLP Trigger: AGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGAGAGGACTTTGGTGTTaGGGTGTCTGCACCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGRGLWC*GVCTPP Trigger: GGGAGGGGTGCAGACACCCAAACACCAAAGTCCTCT...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCAGGAGGCTCCCCATTTaGAGAAACGCTATCGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LKPVQTLVGAALLTQILPRRLPI*RNAIGI Trigger: GATCCCGATAGCGTTTCTCAAAATGGGGAGCCTCCT...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGAAGCCTGTGCAAACCTaGGTGGGGGCTGCATTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGKPVQT*VGAALL Trigger: GAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTT...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR TCA 72 bp | GATGTTGGTTTCTTGATCTTTGGTCACGTTGGAAGGTaGGGTGGTGGCACTCTGAGGGAGGCACCTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DVGFLIFGHVGR*GGGTLREAPAL Trigger: CAGAGCAGGTGCCTCCCTCAGAGTGCCACCACCTCACCTTCCAACGTGACCAAAGATCAAGAAACCAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | AGCTCCAAGAACACTCACTGCCTTACACTCTGCAGGTaGTTGGAAACACTCCCTGGCTGGATGGATGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSKNTHCLTLCR*LETLPGWMDGG Trigger: TCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | TCCCACAGCTCCAAGAACACTCACTGCCTTACACTCTaGAGGTGCTTGGAAACACTCCCTGGCTGGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSSKNTHCLTL*RCLETLPGWMD Trigger: ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTGGAGCTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGAGCTAGAGAGGACTTaGGTGTTTGGGTGTCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLELERT*VFGCLH Trigger: GTGCAGACACCCAAACACCAAAGTCCTCTCTAGCTC...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATAGGAGGCTCCCCATTTaGAGAAACGCTATCGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: THCLTLCRCLETLPGWMDRRLPI*RNAIGI Trigger: GATCCCGATAGCGTTTCTCAAAATGGGGAGCCTCCT...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | GAGGGTCCTAACTTCAGCCACACAAAGGTACATCCATaGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: EGPNFSHTKVHP*LWTAAFPLLLQ Trigger: CTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGTGGCTGAAGTTAGGACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | TGGAAGGGGCTTGGGCTGAAGGTAATGAATGACCAATaGCTGGGGAGAGATTCTTTGAGTCAGGGCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WKGLGLKVMNDQ*LGRDSLSQGFG Trigger: CCCAAAGCCCTGACTCAAAGAATCTCTCCCCAGCCATTGGTCATTCATTACCTTCAGCCCAAGCCCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | CAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGTaGATGATGGATCTTTTGGATGGAGGAGGAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVLGNTPWLDGW*MMDLLDGGGVA Trigger: AGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGGAGTCAAGAAGTGTTTaGGTATATATCCATCGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RAPFIRRDTETRLLSTTGESRSV*VYIHRS Trigger: GGAACGATGGATATATACCAAAACACTTCTTGACTC...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGGGAAGTGGCCCAGGGTaGGAGGTGGGGGAATCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRGSGPG*EVGESR Trigger: GCGAGATTCCCCCACCTCCAACCCTGGGCCACTTCC...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGGAGTCAAGAAGTGTTTaGGTATATATCCATCGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLESRSV*VYIHRS Trigger: GGAACGATGGATATATACCAAAACACTTCTTGACTC...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACAGGAGGCTCCCCATTTaGAGAAACGCTATCGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHRRLPI*RNAIGI Trigger: GATCCCGATAGCGTTTCTCAAAATGGGGAGCCTCCT...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGAACGGTGACAATGACTaGCAAGCAAGTACTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLNGDND*QASTQS Trigger: GCTCTGAGTACTTGCTTGCAAGTCATTGTCACCGTT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | CTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTaGCTGGATGGATGGTGGATGATGGATCTTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPYTLQVLGNTP*LDGWWMMDLLD Trigger: ATCCAAAAGATCCATCATCCACCATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTTTCCTAATTCTGAATTaGGGAGCTAGAGAGGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: DPFCGREDQGETANAAPVFLILN*GAREDF Trigger: AAAGTCCTCTCTAGCTCCCAAATTCAGAATTAGGAA...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGCTGCTTTCCCGCTTTaGCTACAGAACAAGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLAAFPL*LQNKKT Trigger: TGTTTTCTTGTTCTGTAGCAAAAGCGGGAAAGCAGC...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGAACGGTGACAATGACTaGCAAGCAAGTACTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGNGDND*QASTQS Trigger: GCTCTGAGTACTTGCTTGCAAGTCATTGTCACCGTT...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACTTGCCTGCCCTGTGCTaGGCTTCCTGGGGGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: RKSALVDISLTFWLQNYHLPALC*ASWGHM Trigger: CATGTGCCCCCAGGAAGCCAAGCACAGGGCAGGCAA...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR TCA 72 bp | TCCCAAACTGGACATGAGCCAGGAGGCTCCCCATTTTaGGAAACGCTATCGGGATCGACGTCAATATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQTGHEPGGSPF*ETLSGSTSISS Trigger: ACTTGATATTGACGTCGATCCCGATAGCGTTTCTCAAAATGGGGAGCCTCCTGGCTCATGTCCAGTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | CCTAACTTCAGCCACACAAAGGTACATCCATGGCTGTaGACAGCTGCTTTCCCGCTTTTGCTACAGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: PNFSHTKVHPWL*TAAFPLLLQNK Trigger: CTTGTTCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGTGGCTGAAGTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | CGTACACTGCACTACACCAAACACAGGAGATGTGTATaGGCAGCCAGAGATCTGATGCTCTCAGCAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: RTLHYTKHRRCV*AARDLMLSADI Trigger: GATATCTGCTGAGAGCATCAGATCTCTGGCTGCCCATACACATCTCCTGTGTTTGGTGTAGTGCAGTGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACAGAGGACTTTGGTGTTaGGGTGTCTGCACCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RKSALVDISLTFWLQNYHRGLWC*GVCTPP Trigger: GGGAGGGGTGCAGACACCCAAACACCAAAGTCCTCT...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR GCA 72 bp | CTGCAGAGTCACAATCAATCGGAAAGATCTAAGGGTTaGGGTGTGAGACTTGATGTGAGTGTGCGTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQSHNQSERSKG*GVRLDVSVREN Trigger: ATTCTCACGCACACTCACATCAAGTCTCACACCGCAACCCTTAGATCTTTCCGATTGATTGTGACTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGTTCCTAATTCTGAATTaGGGAGCTAGAGAGGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRFLILN*GAREDF Trigger: AAAGTCCTCTCTAGCTCCCAAATTCAGAATTAGGAA...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CCA 72 bp | AAGTCAAAATTCTACTTAAGAAGCTGGCTAGGTGTTTaGGGATCTGAGGGTCCTAACTTCAGCCACACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSKFYLRSWLGV*GSEGPNFSHTK Trigger: CTTTGTGTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTAGAATTTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACGCTGCTTTCCCGCTTTaGCTACAGAACAAGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RKSALVDISLTFWLQNYHAAFPL*LQNKKT Trigger: TGTTTTCTTGTTCTGTAGCAAAAGCGGGAAAGCAGC...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACATTGATGTTGGTTTCTaGATCTTTGGTCACGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RKSALVDISLTFWLQNYHIDVGF*IFGHVG Trigger: TCCAACGTGACCAAAGATCAAGAAACCAACATCAAT...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCAAGACGATGGCCACGGTaGCCAGCACCACCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGPDLSASSQPGVSLCLARRWPR*PAPPGW Trigger: CCAGCCTGGTGGTGCTGGGCACCGTGGCCATCGTCT...TGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTCTGGCACGGGCCACTaGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGSGTGH*RSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCACAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPDLSASSQPGVSLCLAQGPAL*WQSFPE Trigger: CTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTG...TGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGAGACGATGGCCACGGTaGCCAGCACCACCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGRRWPR*PAPPGW Trigger: CCAGCCTGGTGGTGCTGGGCACCGTGGCCATCGTCT...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGTCCCGACCTCTCTGCCAGCAGCCAACCTGGGGTCTCTCTCTGCCTGGCAGAAGCATGCGAGGCCTaGCCCTCATCATCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPDLSASSQPGVSLCLAEACEA*PSSSTQ Trigger: CTGCGTGGATGATGAGGGCCAGGCCTCGCATGCTTC...TGCCAGGCAGAGAGAGACCCCAGGTTGGCTGCTGGCAGAGAGGTCGGGACCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGGGTCAGGCGGTAGGTaGGCCCATAGCCGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPFCGREDQGETANAAPVGSGGR*AHSRWA Trigger: TGCCCAGCGGCTATGGGCTCACCTACCGCCTGACCC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056110.15 |
||
| CDS-3UTR CCA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCTCTGGCACGGGCCACTaGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPTSHSVTKACANLGGGCSGTGH*RSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGA...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTTCTGGCACGGGCCACTaGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPFCGREDQGETANAAPVSGTGH*RSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGA...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCCAGGTGCCCCCGTTCTaGCACGGGCCACTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPVQTLVGAALLTQILPQVPPF*HGPLAQ Trigger: CTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTG...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGCACAGGCAGGAAGCATaGGAGGCCTGGCCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGHRQEA*EAWPSS Trigger: TGATGAGGGCCAGGCCTCGCATGCTTCCTGCCTGTG...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGCCACTGGCGCAGTTaGTCACCGGGCGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THCLTLCRCLETLPGWMDGHWRS*SPGGCR Trigger: CCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGGAAGCATGCGAGGCCTaGCCCTCATCATCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGEACEA*PSSSTQ Trigger: CTGCGTGGATGATGAGGGCCAGGCCTCGCATGCTTC...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGCACGCCCAGGATGGTaGAGCAGATGGCCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPFCGREDQGETANAAPVARPGW*SRWPVP Trigger: AGGGACAGGCCATCTGCTTCACCATCCTGGGCGTGC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
||
| CDS-3UTR GCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGTGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLCSPGG*RSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCA...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGCAGGTGCCCCCGTTCTaGCACGGGCCACTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGQVPPF*HGPLAQ Trigger: CTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTG...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGGCCACTGGCGCAGTTaGTCACCGGGCGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAGHWRS*SPGGCR Trigger: CCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACGGCCACTGGCGCAGTTaGTCACCGGGCGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHGHWRS*SPGGCR Trigger: CCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCC...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACTGCTCGGGCTGGGTGTaGTGGAGGCAGGTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHCSGWV*WRQVPP Trigger: CGGGGGCACCTGCCTCCAGCACACCCAGCCCGAGCA...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109846.11 |
||
| CDS-3UTR GCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGCAGATGGCCTGGGTGTaGTGGAGGCAGGTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGQMAWV*WRQVPP Trigger: CGGGGGCACCTGCCTCCAGCACACCCAGGCCATCTG...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGTGAAGCAGATGGCCTaGGTGTGCTGGAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPFCGREDQGETANAAPVVKQMA*VCWRQV Trigger: CACCTGCCTCCAGCACACCCAGGCCATCTGCTTCAC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCTGGCCTGTCCCTCGGTaGGGAGAGGGGTACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKPVQTLVGAALLTQILPWPVPR*GEGYSC Trigger: ACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCA...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
||
| CDS-3UTR TCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGCACGCCCAGGATGGTaGAGCAGATGGCCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLARPGW*SRWPGC Trigger: ACACCCAGGCCATCTGCTTCACCATCCTGGGCGTGC...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCGGCCCAGCCTTGTGCTaGCAGTCCTTTCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HPTSHSVTKACANLGGGCGPALC*QSFPEN Trigger: GTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCC...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATCTGGCACGGGCCACTaGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTASGTGH*RSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGCAGGTGCCCCCGTTCTaGCACGGGCCACTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRQVPPF*HGPLAQ Trigger: CTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTG...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATCGGGCTGGGTGTGCTaGAGGCAGGTGCCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTASGWVC*RQVPPF Trigger: GAACGGGGGCACCTGCCTCCAGCACACCCAGCCCGA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109846.11 |
||
| 3UTR CAA 72 bp | GTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTaGTGTGGGTGGATGCCGTGGAATTTTGACGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKTRVRLQTLLL*CGWMPWNFDGA Trigger: GGCCCCGTCAAAATTCCACGGCATCCACCCACACAACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCCCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HPTSHSVTKACANLGGGCPCRLH*HSQGQL Trigger: TAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGG...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACTGGCCTGTCCCTCGGTaGGGAGAGGGGTACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDWPVPR*GEGYSC Trigger: ACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCA...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR TCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGAGGTTTCGCACTTGTTaGGAAAGACGATGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLRFRTC*ERRWPR Trigger: CCGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCT...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGSLQMH*HGSLQT Trigger: AGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGCAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLQGPAL*WQSFPE Trigger: CTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTG...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATCAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: THCLTLCRCLETLPGWMDQGPAL*WQSFPE Trigger: CTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTG...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATTGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: THCLTLCRCLETLPGWMDCSPGG*RSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCA...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAAGACGATGGCCACGGTaGCCAGCACCACCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTARRWPR*PAPPGW Trigger: CCAGCCTGGTGGTGCTGGGCACCGTGGCCATCGTCT...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACAGATGGCCGGGCGGCTaGAGGTCTTGTCGACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDRWPGG*RSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGCCATCT...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109843.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACTCACCTGGGTGTGCTaGAGGCAGGTGCCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTALTWVC*RQVPPF Trigger: GAACGGGGGCACCTGCCTCCAGCACACCCAGGTGAG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR CCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGCACTCGAAGCTCACCTaGGTGTGCTGGAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLHSKLT*VCWRQV Trigger: CACCTGCCTCCAGCACACCCAGGTGAGCTTCGAGTG...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056110.15 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACCACTCGAAGCTCACCTaGGTGTGCTGGAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDHSKLT*VCWRQV Trigger: CACCTGCCTCCAGCACACCCAGGTGAGCTTCGAGTG...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR CCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAATGGCCTGGGTGTGCTaGAGGCAGGTGCCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRMAWVC*RQVPPF Trigger: GAACGGGGGCACCTGCCTCCAGCACACCCAGGCCAT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATGTTGCTCGGGCTGCTaGACAGGCAGCTCGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTACCSGC*TGSSCT Trigger: GGTGCACGAGCTGCCTGTTCAGCAGCCCGAGCAACA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR GCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGTCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLSLQMH*HGSLQT Trigger: AGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGA...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAPFIRRDTETRLLSTTGSPLLY*NRRFFF Trigger: GAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCAGGTGCCCCCGTTCTaGCACGGGCCACTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWQVPPF*HGPLAQ Trigger: CTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTG...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGCTCACCTGGGTGTGCTaGAGGCAGGTGCCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRLTWVC*RQVPPF Trigger: GAACGGGGGCACCTGCCTCCAGCACACCCAGGTGAG...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056110.15 |
||
| CDS-3UTR TCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGCACCAGCCTCCTTGTTaGAAGTGGTCATGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLHQPPC*KWSCQS Trigger: AGATTGACATGACCACTTTCAACAAGGAGGCTGGTG...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAACACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGATTCAGCCCCATAGGTaGTGTGGCCGAAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEHSLPYTLQVLGNTPWLIQPHR*CGRKPA Trigger: TGCTGGCTTTCGGCCACAGCACCTATGGGGCTGAAT...CAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGTGTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACATTCAGCCCCATAGGTaGTGTGGCCGAAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDIQPHR*CGRKPA Trigger: TGCTGGCTTTCGGCCACAGCACCTATGGGGCTGAAT...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAQGPAL*WQSFPE Trigger: CTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACACAGGCAGGAAGCATaGGAGGCCTGGCCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAHRQEA*EAWPSS Trigger: TGATGAGGGCCAGGCCTCGCATGCTTCCTGCCTGTG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGGTACAGCTGTTGGTTaGGGCTACGATCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPFCGREDQGETANAAPVGTAVG*GYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTACSPGG*RSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLGGSSS*EACGCS Trigger: GCTACAACCACATGCTTCGCAAGAAGAAGAACCTCC...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLSPLLY*NRRFFF Trigger: GAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGA...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCGCAGATGCACTGCCATaGTTCCTTGCAGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HPTSHSVTKACANLGGGCADALP*FLADSI Trigger: AATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGC...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGAAGCATGCGAGGCCTaGCCCTCATCATCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAEACEA*PSSSTQ Trigger: CTGCGTGGATGATGAGGGCCAGGCCTCGCATGCTTC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGCCTTACACTCTGCAGGTGCTTGGAAACACTCCCTGGCTGGATGGATGGTTGTAGCGCAGGTTaGACACCCAGGTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: THCLTLCRCLETLPGWMDGCSAG*TPRFRT Trigger: AGTGCGAAACCTGGGTGTCCAACCTGCGCTACAACC...ATCCATCCAGCCAGGGAGTGTTTCCAAGCACCTGCAGAGTGTAAGGCAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| 3UTR CAA 72 bp | CCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTaGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQAIVSLKPVQT*VGAALLTQILP Trigger: GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCGAGGGGTACTCTTGTTaGGCTCTTTCATGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPVQTLVGAALLTQILPEGYSC*ALSWTP Trigger: AGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTC...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACAGGTTTCGCACTTGTTaGGAAAGACGATGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDRFRTC*ERRWPR Trigger: CCGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCT...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCCACCAGCCTCCTTGTTaGAAGTGGTCATGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HPTSHSVTKACANLGGGCHQPPC*KWSCQS Trigger: AGATTGACATGACCACTTTCAACAAGGAGGCTGGTG...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCGGTACAGCTGTTGGTTaGGGCTACGATCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKPVQTLVGAALLTQILPGTAVG*GYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACC...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTASQNPY*GSQGGS Trigger: CGACCCACCCTGTGACCCCCAGTATGGATTCTGCGA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHSQNPY*GSQGGS Trigger: CGACCCACCCTGTGACCCCCAGTATGGATTCTGCGA...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGCAGGAGCATTCGTACTaGCCTTTCTCCAGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGQEHSY*PFSRST Trigger: CGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTG...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDAIVLA*VRGTAV Trigger: AACAGCTGTACCCCTAACCCATGCGAGAACGATGGC...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACCCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHPCRLH*HSQGQL Trigger: TAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGG...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCGGGTCAGGCGGTAGGTaGGCCCATAGCCGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTGSGGR*AHSRWA Trigger: TGCCCAGCGGCTATGGGCTCACCTACCGCCTGACCC...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR TCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATGCACGCCCAGGATGGTaGAGCAGATGGCCGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNARPGW*SRWPGG Trigger: GCCGCCCGGCCATCTGCTTCACCATCCTGGGCGTGC...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109843.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAATTCAGCCCCATAGGTaGTGTGGCCGAAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRIQPHR*CGRKPA Trigger: TGCTGGCTTTCGGCCACAGCACCTATGGGGCTGAAT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAAGCCAACATGGCACCTaGAGACATTGTCAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRSQHGT*RHCQPR Trigger: GCGAGGCTGACAATGTCTGCAGGTGCCATGTTGGCT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACTCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFLDSVVAWHTATQDSLQMH*HGSLQT Trigger: AGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGA...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPVQTLVGAALLTQILPSPLLY*NRRFFF Trigger: GAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGA...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGCCCAGCCTTGTGCTaGCAGTCCTTTCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGPALC*QSFPEN Trigger: GTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACAGGCAGGAAGCATaGGAGGCCTGGCCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWHRQEA*EAWPSS Trigger: TGATGAGGGCCAGGCCTCGCATGCTTCCTGCCTGTG...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGACGATGGCCACGGTaGCCAGCACCACCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTRRWPR*PAPPGW Trigger: CCAGCCTGGTGGTGCTGGGCACCGTGGCCATCGTCT...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGCAGGAGCATTCGTACTaGCCTTTCTCCAGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRQEHSY*PFSRST Trigger: CGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTG...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCATGTTGCTCGGGCTGCTaGACAGGCAGCTCGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPCCSGC*TGSSCT Trigger: GGTGCACGAGCTGCCTGTTCAGCAGCCCGAGCAACA...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGCACGCCCAGGATGGTaGAGCAGATGGCCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPARPGW*SRWPVP Trigger: AGGGACAGGCCATCTGCTTCACCATCCTGGGCGTGC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR GCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGGTACAGCTGTTGGTTaGGGCTACGATCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAGTAVG*GYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGACGATGGCCACGGTaGCCAGCACCACCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNRRWPR*PAPPGW Trigger: CCAGCCTGGTGGTGCTGGGCACCGTGGCCATCGTCT...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWSQNPY*GSQGGS Trigger: CGACCCACCCTGTGACCCCCAGTATGGATTCTGCGA...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGCAGATGCACTGCCATaGTTCCTTGCAGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAADALP*FLADSI Trigger: AATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACGCAGATGCACTGCCATaGTTCCTTGCAGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHADALP*FLADSI Trigger: AATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGC...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAGCAGATGCACTGCCATaGTTCCTTGCAGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRADALP*FLADSI Trigger: AATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGC...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGGGCCCAGCCTTGTGCTaGCAGTCCTTTCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWGPALC*QSFPEN Trigger: GTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCC...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRAIVLA*VRGTAV Trigger: AACAGCTGTACCCCTAACCCATGCGAGAACGATGGC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCATGGCCTGTCCCTCGGTaGGGAGAGGGGTACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPWPVPR*GEGYSC Trigger: ACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCA...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR TCA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACACCAGCCTCCTTGTTaGAAGTGGTCATGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAHQPPC*KWSCQS Trigger: AGATTGACATGACCACTTTCAACAAGGAGGCTGGTG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGATTCAGCCCCATAGGTaGTGTGGCCGAAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWIQPHR*CGRKPA Trigger: TGCTGGCTTTCGGCCACAGCACCTATGGGGCTGAAT...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCCAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTQGPAL*WQSFPE Trigger: CTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTG...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGAAGCATGCGAGGCCTaGCCCTCATCATCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPEACEA*PSSSTQ Trigger: CTGCGTGGATGATGAGGGCCAGGCCTCGCATGCTTC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATCACAGGCAGGAAGCATaGGAGGCCTGGCCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNHRQEA*EAWPSS Trigger: TGATGAGGGCCAGGCCTCGCATGCTTCCTGCCTGTG...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATTGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNCSPGG*RSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCA...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGGSSS*EACGCS Trigger: GCTACAACCACATGCTTCGCAAGAAGAAGAACCTCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRSQNPY*GSQGGS Trigger: CGACCCACCCTGTGACCCCCAGTATGGATTCTGCGA...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCACCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPPCRLH*HSQGQL Trigger: TAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGG...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCCCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTPCRLH*HSQGQL Trigger: TAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGG...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACCCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKSALVDISLTFWLQNYHPCRLH*HSQGQL Trigger: TAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGG...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGGAGGGGTACTCTTGTTaGGCTCTTTCATGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWEGYSC*ALSWTP Trigger: AGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTC...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR GCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGTCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWSLQMH*HGSLQT Trigger: AGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGA...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNSQNPY*GSQGGS Trigger: CGACCCACCCTGTGACCCCCAGTATGGATTCTGCGA...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGGCAGATGCACTGCCATaGTTCCTTGCAGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWADALP*FLADSI Trigger: AATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGC...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGCAGGAGCATTCGTACTaGCCTTTCTCCAGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRQEHSY*PFSRST Trigger: CGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTG...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATGGCCCAGCCTTGTGCTaGCAGTCCTTTCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNGPALC*QSFPEN Trigger: GTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCC...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACGGTTGTAGCGCAGGTTaGACACCCAGGTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RKSALVDISLTFWLQNYHGCSAG*TPRFRT Trigger: AGTGCGAAACCTGGGTGTCCAACCTGCGCTACAACC...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGGTTGTAGCGCAGGTTaGACACCCAGGTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPGCSAG*TPRFRT Trigger: AGTGCGAAACCTGGGTGTCCAACCTGCGCTACAACC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCGGTTGTAGCGCAGGTTaGACACCCAGGTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTGCSAG*TPRFRT Trigger: AGTGCGAAACCTGGGTGTCCAACCTGCGCTACAACC...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAAGGTTTCGCACTTGTTaGGAAAGACGATGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPRFRTC*ERRWPR Trigger: CCGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCT...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGGTTTCGCACTTGTTaGGAAAGACGATGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTRFRTC*ERRWPR Trigger: CCGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCT...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACCAGCCTCCTTGTTaGAAGTGGTCATGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWHQPPC*KWSCQS Trigger: AGATTGACATGACCACTTTCAACAAGGAGGCTGGTG...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYHALIGRKGFLDSVVAWGGSSS*EACGCS Trigger: GCTACAACCACATGCTTCGCAAGAAGAAGAACCTCC...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATCAGGAGCATTCGTACTaGCCTTTCTCCAGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNQEHSY*PFSRST Trigger: CGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTG...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPAIVLA*VRGTAV Trigger: AACAGCTGTACCCCTAACCCATGCGAGAACGATGGC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATGGTTGTAGCGCAGGTTaGACACCCAGGTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNGCSAG*TPRFRT Trigger: AGTGCGAAACCTGGGTGTCCAACCTGCGCTACAACC...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR TCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGAGGGGTACTCTTGTTaGGCTCTTTCATGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPEGYSC*ALSWTP Trigger: AGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR GCA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCAGGTACAGCTGTTGGTTaGGGCTACGATCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPGTAVG*GYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACC...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGGGTACAGCTGTTGGTTaGGGCTACGATCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRGTAVG*GYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACC...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNAIVLA*VRGTAV Trigger: AACAGCTGTACCCCTAACCCATGCGAGAACGATGGC...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATTCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNSLQMH*HGSLQT Trigger: AGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGA...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATAGGCTGTTTTGTCCAATTGTAGAATTCCAAATTGGGAAACCGAGGGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRNRLFCPIVEFQIGKPRGGSSS*EACGCS Trigger: GCTACAACCACATGCTTCGCAAGAAGAAGAACCTCC...CCTCGGTTTCCCAATTTGGAATTCTACAATTGGACAAAACAGCCTATTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTGGSSS*EACGCS Trigger: GCTACAACCACATGCTTCGCAAGAAGAAGAACCTCC...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR GCA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NICKHSVHSIPHNRANSTSPLLY*NRRFFF Trigger: GAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGA...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATCACCAGCCTCCTTGTTaGAAGTGGTCATGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNHQPPC*KWSCQS Trigger: AGATTGACATGACCACTTTCAACAAGGAGGCTGGTG...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR GCA 90 bp | ACAGCAACACAAGACAATATATGTAAGCATAGCGTTCACTCGATTCCACACAATTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TATQDNICKHSVHSIPHNSPLLY*NRRFFF Trigger: GAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGA...ATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATTGTCTTGTGTTGCTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS GCA 90 bp | CCCCGTTCTGGCACGGGCCACTGGCGCAGTTGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATCCAGCTGGGCAGCGGCAACGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRSGTGHWRSCSPGG*RSCRRIQLGSGNGS Trigger: ACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGAACGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS GCA 90 bp | GCTTGCACAGACACTCGAAGCTCACCTGGGTGTGCTGGAGGCAGGTaGCCCCGTTCTGGCACGGGCCACTGGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ACTDTRSSPGCAGGR*PRSGTGHWRSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTGCCTCCAGCACACCCAGGTGAGCTTCGAGTGTCTGTGCAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
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| CDS GCA 90 bp | ACACCTTCAGGATGTGTTGCTCGGGCTGGGTGTGCTGGAGGCAGGTaGCCCCGTTCTGGCACGGGCCACTGGCGCAGTTGCTCACCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSGCVARAGCAGGR*PRSGTGHWRSCSPG Trigger: GCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTGCCTCCAGCACACCCAGCCCGAGCAACACATCCTGAAGGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109846.11 |
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| CDS CCA 90 bp | GATGGCCTGTCCCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGTGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: DGLSRAAAGLVDESS*AAATEVTPDVGADA Trigger: GGCGTCTGCACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGGACAGGCCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109841.9 |
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| CDS CCA 90 bp | GCATGCGAGGCCTGGCCCTCATCATCCACGCAGGCGCCTCCGTGCTaGCAGGGAGAACCATTGATCACGCAGGGCCCAGCCTTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACEAWPSSSTQAPPC*QGEPLITQGPALCW Trigger: CCAGCACAAGGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCACGGAGGCGCCTGCGTGGATGATGAGGGCCAGGCCTCGCATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | GCAGTTGCTCACCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGTGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVAHRAAAGLVDESS*AAATEVTPDVGADA Trigger: GGCGTCTGCACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | GAAGCAGATGGCCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGTGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: EADGRAAAGLVDESS*AAATEVTPDVGADA Trigger: GGCGTCTGCACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGCCATCTGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109843.8 |
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| CDS GCA 90 bp | GAAGCATGCGAGGCCTGGCCCTCATCATCCACGCAGGCGCCTCCGTaGTGGCAGGGAGAACCATTGATCACGCAGGGCCCAGCCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EACEAWPSSSTQAPP*WQGEPLITQGPALC Trigger: GCACAAGGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCACGGAGGCGCCTGCGTGGATGATGAGGGCCAGGCCTCGCATGCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTGGCAGGGAGAACCATaGATCACGCAGGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAPFIRRDTETRLLSTTGWQGEP*ITQGPA Trigger: GGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACGGGCCACTGGCGCAGTaGCTCACCGGGCGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDGPLAQ*LTGRLQ Trigger: CTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCC...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS GCA 90 bp | CCGTGCTGGCAGGGAGAACCATTGATCACGCAGGGCCCAGCCTTGTaGTGGCAGTCCTTTCCAGAGAACCCAGGTGTGCAGGAGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PCWQGEPLITQGPAL*WQSFPENPGVQEHS Trigger: CGAATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPFCGREDQGETANAAPVGRLQV*STNPAG Trigger: CCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCC...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPFIRRDTETRLLSTTGSGKMI*TASSSP Trigger: CGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CACCCCACAAGCCATAGTGTCACTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCTGGCAGGGAGAACCATaGATCACGCAGGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPTSHSVTKACANLGGGCWQGEP*ITQGPA Trigger: GGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCA...GCAGCCCCCACCAAGGTTTGCACAGGCTTTAGTGACACTATGGCTTGTGGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGGGCCACTGGCGCAGTaGCTCACCGGGCGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAGPLAQ*LTGRLQ Trigger: CTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAGGGCCACTGGCGCAGTaGCTCACCGGGCGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRGPLAQ*LTGRLQ Trigger: CTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCC...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS GCA 90 bp | AGGGCCCAGCCTTGTGCTGGCAGTCCTTTCCAGAGAACCCAGGTGTaGAGGAGCATTCGTACTGGCCTTTCTCCAGGTCCACGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQPCAGSPFQRTQV*RSIRTGLSPGPRKF Trigger: GAACTTGCGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | GGGGCAGTTACACACTTGTCACAGAGGGGACCCTCCCAGCCAACATaGCACCTGCAGACATTGTCAGCCTCGCAGAATCCATACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAVTHLSQRGPSQPT*HLQTLSASQNPYWG Trigger: CCCCCAGTATGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCATGTTGGCTGGGAGGGTCCCCTCTGTGACAAGTGTGTAACTGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | TGCTGGCAGGGAGAACCATTGATCACGCAGGGCCCAGCCTTGTGCTaGCAGTCCTTTCCAGAGAACCCAGGTGTGCAGGAGCATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CWQGEPLITQGPALC*QSFPENPGVQEHSY Trigger: GTACGAATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | GACCCTTTCTGCGGACGTGAAGACCAGGGTGAGACTGCAAACGCTGCTCCTGTTCCGTCCCAGCCATCCTaGCAGATGCACTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: DPFCGREDQGETANAAPVPSQPS*QMHCHG Trigger: ACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGG...AACAGGAGCAGCGTTTGCAGTCTCACCCTGGTCTTCACGTCCGCAGAAAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGGGGCCACTGGCGCAGTaGCTCACCGGGCGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRGPLAQ*LTGRLQ Trigger: CTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCC...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | TGGCAGTCCTTTCCAGAGAACCCAGGTGTGCAGGAGCATTCGTACTaGCCTTTCTCCAGGTCCACGCAAGTTCCATTGTTGGCGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WQSFPENPGVQEHSY*PFSRSTQVPLLAQG Trigger: CCCCTGCGCCAACAATGGAACTTGCGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | ACGGAAGTCACCCCCGATGTCGGTGCAGACGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTTGGTTGCGGCTACGATCTCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEVTPDVGADAIVLA*VRGTAVGCGYDLTE Trigger: TTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACCCCTAACCCATGCGAGAACGATGGCGTCTGCACCGACATCGGGGGTGACTTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVQTLVGAALLTQILPSGKMI*TASSSP Trigger: CGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGA...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS GCA 90 bp | TTACACACTTGTCACAGAGGGGACCCTCCCAGCCAACATGGCACCTaGAGACATTGTCAGCCTCGCAGAATCCATACTGGGGGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHTCHRGDPPSQHGT*RHCQPRRIHTGGHR Trigger: CCTGTGACCCCCAGTATGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCATGTTGGCTGGGAGGGTCCCCTCTGTGACAAGTGTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 90 bp | CCAACATGGCACCTGCAGACATTGTCAGCCTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCGCATTCAGCCCCTGAGGAAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTWHLQTLSASQNPY*GSQGGSHSAPEEEK Trigger: TTTCTCTTCCTCAGGGGCTGAATGCGACCCACCCTGTGACCCCCAGTATGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCATGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124293.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACCCGTCCCAGCCATCCTaGCAGATGCACTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDPSQPS*QMHCHG Trigger: ACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGG...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGTGGCAGGGAGAACCATaGATCACGCAGGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGWQGEP*ITQGPA Trigger: GGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCA...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAGRLQV*STNPAG Trigger: CCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCC...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGAGGAGAGGGGTACTCTaGTTGAGCTCTTTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RAPFIRRDTETRLLSTTGRRGVL*LSSFMD Trigger: GTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCT...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
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| CDS GCA 90 bp | CCAGCTCCTCGCCGCTGTTATACTGCAACAGGAGGTTCTTCTTCTTaGGAAGCATGTGGTTGTAGCGCAGGTTGGACACCCAGGTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRRCYTATGGSSS*EACGCSAGWTPRFR Trigger: GCGAAACCTGGGTGTCCAACCTGCGCTACAACCACATGCTTCGCAAGAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGAGGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 ENSMUST00000173812.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCTGGCACCTGCAGACATaGTCAGCCTCGCAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LKPVQTLVGAALLTQILPWHLQT*SASQNP Trigger: TGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCA...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCATGGCAGGGAGAACCATaGATCACGCAGGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAWQGEP*ITQGPA Trigger: GGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCA...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGACTATGCCCCTCGGCCTGCACATCCCACAGCTCCAAGAACACTCACTGAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SQTMPLGLHIPQLQEHSLRGVLL*SSFMDT Trigger: GGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCT...CAGTGAGTGTTCTTGGAGCTGTGGGATGTGCAGGCCGAGGGGCATAGTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
||
| CDS-3UTR CAA 90 bp | CGGGCCCCCTTTATCAGGAGAGACACAGAGACACGGCTGCTCTCCACAACAGGGTCACCAGCCTCCTTGTaGAAAGTGGTCATGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RAPFIRRDTETRLLSTTGSPASL*KVVMSI Trigger: GATTGACATGACCACTTTCAACAAGGAGGCTGGTGA...CCCTGTTGTGGAGAGCAGCCGTGTCTCTGTGTCTCTCCTGATAAAGGGGGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACTGGCACCTGCAGACATaGTCAGCCTCGCAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDWHLQT*SASQNP Trigger: TGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCA...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAGGGGCAGTTACACACTaGTCACAGAGGGGACCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRGAVTH*SQRGPS Trigger: GGAGGGTCCCCTCTGTGACAAGTGTGTAACTGCCCC...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACCGTCCCAGCCATCCTaGCAGATGCACTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAPSQPS*QMHCHG Trigger: ACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CTAAAGCCTGTGCAAACCTTGGTGGGGGCTGCATTGCTCACTCAGATTCTGCCCCAGGTTTCGCACTTGTaGAGAAAGACGATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVQTLVGAALLTQILPQVSHL*RKTMAT Trigger: CGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTG...GGGCAGAATCTGAGTGAGCAATGCAGCCCCCACCAAGGTTTGCACAGGCTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS GCA 90 bp | TCTATTTCGCAGAATTTCCCGTCCCAGCCATCCTTGCAGATGCACTaGCATGGTTCCTTGCAGACTCCATTGACACAGCCAGGGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SISQNFPSQPSLQMH*HGSLQTPLTQPGAV Trigger: AACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGGGAAATTCTGCGAAATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWGRLQV*STNPAG Trigger: CCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCC...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGACACCTTCAGGATGTGTaGCTCGGGCTGCTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRHLQDV*LGLLNR Trigger: CCTGTTCAGCAGCCCGAGCAACACATCCTGAAGGTG...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056110.15 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACCAGGTTTCGCACTTGTaGAGAAAGACGATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDQVSHL*RKTMAT Trigger: CGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTG...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDRGVLL*SSFMDT Trigger: GGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCT...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR CAA 90 bp | TGGTGGATGATGGATCTTTTGGATGGAGGAGGAGTTGCTAAGAGAACAGCCGGGCAGGTTTCGCACTTGTaGAGAAAGACGATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: WWMMDLLDGGGVAKRTAGQVSHL*RKTMAT Trigger: CGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTG...CCCGGCTGTTCTCTTAGCAACTCCTCCTCCATCCAAAAGATCCATCATCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCCCATGAACGGGGGCTaGCACAGACACTCGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWPMNGG*HRHSKL Trigger: GAGCTTCGAGTGTCTGTGCAAGCCCCCGTTCATGGG...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR CAA 90 bp | GCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCACAGGTTTCGCACTTGTaGAGAAAGACGATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: ALIGRKGFLDSVVAWHTAQVSHL*RKTMAT Trigger: CGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTG...TGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWSGKMI*TASSSP Trigger: CGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGA...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACACAGCAACACAAGACTCACCAGCCTCCTTGTaGAAAGTGGTCATGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GRKGFLDSVVAWHTATQDSPASL*KVVMSI Trigger: GATTGACATGACCACTTTCAACAAGGAGGCTGGTGA...GTCTTGTGTTGCTGTGTGCCATGCTACCACGCTATCTAAGAACCCCTTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCATGGCAGGGAGAACCATaGATCACGCAGGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPWQGEP*ITQGPA Trigger: GGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCA...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGCACCTTCAGGATGTGTaGCTCGGGCTGCTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWHLQDV*LGLLNR Trigger: CCTGTTCAGCAGCCCGAGCAACACATCCTGAAGGTG...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS-3UTR CAA 90 bp | ACACAAAGGTACATCCATGGCTGTGGACAGCTGCTTTCCCGCTTTTGCTACAGAAGGAGAGGGGTACTCTaGTTGAGCTCTTTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TQRYIHGCGQLLSRFCYRRRGVL*LSSFMD Trigger: GTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCT...TCTGTAGCAAAAGCGGGAAAGCAGCTGTCCACAGCCATGGATGTACCTTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 |
||
| CDS-3UTR CAA 90 bp | CTCAAAATGAGATGGGATAATGAGGTGATTGTGATGGGGCTGGTTTGCCTCAGGCAGGTTTCGCACTTGTaGAGAAAGACGATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LKMRWDNEVIVMGLVCLRQVSHL*RKTMAT Trigger: CGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTG...CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCCCGTCCCAGCCATCCTaGCAGATGCACTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: NICKHSVHSIPHNRANSTPSQPS*QMHCHG Trigger: ACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGG...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCACCGTCCCAGCCATCCTaGCAGATGCACTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPPSQPS*QMHCHG Trigger: ACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGG...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | AATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NICKHSVHSIPHNRANSTSGKMI*TASSSP Trigger: CGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGA...GGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | TACTTAAGAAGCTGGCTAGGTGTTTGGGGATCTGAGGGTCCTAACTTCAGCCACTCACCAGCCTCCTTGTaGAAAGTGGTCATGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: YLRSWLGVWGSEGPNFSHSPASL*KVVMSI Trigger: GATTGACATGACCACTTTCAACAAGGAGGCTGGTGA...GTGGCTGAAGTTAGGACCCTCAGATCCCCAAACACCTAGCCAGCTTCTTAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCATGGCACCTGCAGACATaGTCAGCCTCGCAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPWHLQT*SASQNP Trigger: TGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCA...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGCGCCCTGGTGGACATTTCATTGACATTTTGGTTACAGAATTATCACTGGCACCTGCAGACATaGTCAGCCTCGCAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKSALVDISLTFWLQNYHWHLQT*SASQNP Trigger: TGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCA...GTGATAATTCTGTAACCAAAATGTCAATGAAATGTCCACCAGGGCGCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWRGVLL*SSFMDT Trigger: GGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCT...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR CAA 90 bp | CATTATCATGCATTAATAGGGAGGAAGGGGTTCTTAGATAGCGTGGTAGCATGGAGGAGAGGGGTACTCTaGTTGAGCTCTTTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HYHALIGRKGFLDSVVAWRRGVL*LSSFMD Trigger: GTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCT...CCATGCTACCACGCTATCTAAGAACCCCTTCCTCCCTATTAATGCATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 |
||
| CDS-3UTR CAA 90 bp | ATATATGTAAGCATAGCGTTCACTCGATTCCACACAATAGAGCAAACTCCACCATCACCAGCCTCCTTGTaGAAAGTGGTCATGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: IYVSIAFTRFHTIEQTPPSPASL*KVVMSI Trigger: GATTGACATGACCACTTTCAACAAGGAGGCTGGTGA...TGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS GCA 72 bp | GGCACGGGCCACTGGCGCAGTTGCTCACCGGGCGGCTaGAGGTCTTGTCGACGAATCCAGCTGGGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGHWRSCSPGG*RSCRRIQLGSG Trigger: GCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS CAA 90 bp | TGGCACGGGCCACTGGCGCAGTTGCTCACCGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGGCAGCGGCAACGGAAGTCACCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: WHGPLAQLLTGRLQV*STNPAGQRQRKSPP Trigger: CGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS GCA 72 bp | AGGTGCCCCCGTTCTGGCACGGGCCACTGGCGCAGTTaGTCACCGGGCGGCTGCAGGTCTTGTCGACGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RCPRSGTGHWRS*SPGGCRSCRRI Trigger: GATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS CCA 72 bp | GGCCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRAAAGLVDESS*AAATEVTPDVG Trigger: ACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109843.8 |
||
| CDS CAA 72 bp | CAGGTGCCCCCGTTCTGGCACGGGCCACTGGCGCAGTaGCTCACCGGGCGGCTGCAGGTCTTGTCGACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QVPPFWHGPLAQ*LTGRLQVLSTN Trigger: ATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGGCCCGTGCCAGAACGGGGGCACCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS GCA 72 bp | GAGGCCTGGCCCTCATCATCCACGCAGGCGCCTCCGTaGTGGCAGGGAGAACCATTGATCACGCAGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EAWPSSSTQAPP*WQGEPLITQGP Trigger: TGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCACGGAGGCGCCTGCGTGGATGATGAGGGCCAGGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
||
| CDS CCA 72 bp | CACCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRAAAGLVDESS*AAATEVTPDVG Trigger: ACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS CCA 72 bp | TCCCGGGCGGCTGCAGGTCTTGTCGACGAATCCAGCTaGGCAGCGGCAACGGAAGTCACCCCCGATGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRAAAGLVDESS*AAATEVTPDVG Trigger: ACCGACATCGGGGGTGACTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109841.9 |
||
| CDS CAA 72 bp | CCACTGGCGCAGTTGCTCACCGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGGCAGCGGCAACGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLAQLLTGRLQV*STNPAGQRQRK Trigger: CTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGTGAGCAACTGCGCCAGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056110.15 ENSMUST00000109842.9 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
||
| CDS CAA 90 bp | CTAGCCCCGCGCTTCTTCGCGCACGTGGGACCCATGAACGGGGGCTaGCACAGACACTCGAAGCTCACCTGGGTGTGCTGGAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRFFAHVGPMNGG*HRHSKLTWVCWRQV Trigger: CACCTGCCTCCAGCACACCCAGGTGAGCTTCGAGTGTCTGTGCAAGCCCCCGTTCATGGGTCCCACGTGCGCGAAGAAGCGCGGGGCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS TCA 72 bp | TTCATGGACACCTTCAGGATGTGTTGCTCGGGCTGCTaGACAGGCAGCTCGTGCACCCCGGGGGTCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FMDTFRMCCSGC*TGSSCTPGVRR Trigger: CCGCCTGACCCCCGGGGTGCACGAGCTGCCTGTTCAGCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
||
| CDS CAA 72 bp | AGGATGGTGAAGCAGATGGCCGGGCGGCTGCAGGTCTaGTCGACGAATCCAGCTGGGCAGCGGCAACGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RMVKQMAGRLQV*STNPAGQRQRK Trigger: CTTCCGTTGCCGCTGCCCAGCTGGATTCGTCGACAAGACCTGCAGCCGCCCGGCCATCTGCTTCACCATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109843.8 |
||
| CDS CAA 90 bp | CCTCCGTGCTGGCAGGGAGAACCATTGATCACGCAGGGCCCAGCCTaGTGCTGGCAGTCCTTTCCAGAGAACCCAGGTGTGCAGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPCWQGEPLITQGPA*CWQSFPENPGVQEH Trigger: ATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCAGCACAAGGCTGGGCCCTGCGTGATCAATGGTTCTCCCTGCCAGCACGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
||
| CDS CCA 72 bp | GTCAGCCTCGCAGAATCCATACTGGGGGTCACAGGGTaGGTCGCATTCAGCCCCATAGGTGCTGTGGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSLAESILGVTG*VAFSPIGAVAE Trigger: TTCGGCCACAGCACCTATGGGGCTGAATGCGACCCACCCTGTGACCCCCAGTATGGATTCTGCGAGGCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS CCA 72 bp | ACCCCCGATGTCGGTGCAGACGCCATCGTTCTCGCATaGGTTAGGGGTACAGCTGTTGGTTGCGGCTACGAT | + |
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Preference number: 6 (lower is better) Translates to: TPDVGADAIVLA*VRGTAVGCGYD Trigger: ATCGTAGCCGCAACCAACAGCTGTACCCCTAACCCATGCGAGAACGATGGCGTCTGCACCGACATCGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS CCA 72 bp | CACCTGCAGACATTGTCAGCCTCGCAGAATCCATACTaGGGGTCACAGGGTGGGTCGCATTCAGCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HLQTLSASQNPY*GSQGGSHSAPE Trigger: CTCAGGGGCTGAATGCGACCCACCCTGTGACCCCCAGTATGGATTCTGCGAGGCTGACAATGTCTGCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124293.3 |
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| CDS CAA 90 bp | TCGGTGCAGACGCCATCGTTCTCGCATGGGTTAGGGGTACAGCTGTaGGTTGCGGCTACGATCTCACAGAAGTTGCCTGAGAAGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SVQTPSFSHGLGVQL*VAATISQKLPEKPG Trigger: CCCTGGCTTCTCAGGCAACTTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACCCCTAACCCATGCGAGAACGATGGCGTCTGCACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 |
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| CDS TCA 72 bp | TGTAGCGCAGGTTGGACACCCAGGTTTCGCACTTGTTaGGAAAGACGATGGCCACGGTGCCCAGCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: CSAGWTPRFRTC*ERRWPRCPAPP Trigger: TGGTGGTGCTGGGCACCGTGGCCATCGTCTTTCTCAACAAGTGCGAAACCTGGGTGTCCAACCTGCGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 ENSMUST00000173812.2 |
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| CDS GCA 72 bp | TGTCACAGAGGGGACCCTCCCAGCCAACATGGCACCTaGAGACATTGTCAGCCTCGCAGAATCCATACTGGG | + |
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Preference number: 6 (lower is better) Translates to: CHRGDPPSQHGT*RHCQPRRIHTG Trigger: CCCAGTATGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCATGTTGGCTGGGAGGGTCCCCTCTGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS GCA 72 bp | TTGTTGAGCTCTTTCATGGACACCTTCAGGATGTGTTaGTCGGGCTGCTGGGTGTGCTGGAGGCAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLSSFMDTFRMC*SGCWVCWRQVP Trigger: GGGCACCTGCCTCCAGCACACCCAGCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173812.2 |
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| CDS CCA 72 bp | ACTGGCCTTTCTCCAGGTCCACGCAAGTTCCATTGTTaGCGCAGGGGGTTGAGGTGCAAGCCCGAACGTCTA | + |
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Preference number: 6 (lower is better) Translates to: TGLSPGPRKFHC*RRGLRCKPERL Trigger: TAGACGTTCGGGCTTGCACCTCAACCCCCTGCGCCAACAATGGAACTTGCGTGGACCTGGAGAAAGGCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | CAGACTCCATTGACACAGCCAGGGGCAGTTACACACTaGTCACAGAGGGGACCCTCCCAGCCAACATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QTPLTQPGAVTH*SQRGPSQPTWH Trigger: GTGCCATGTTGGCTGGGAGGGTCCCCTCTGTGACAAGTGTGTAACTGCCCCTGGCTGTGTCAATGGAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | TACTGGCCTTTCTCCAGGTCCACGCAAGTTCCATTGTaGGCGCAGGGGGTTGAGGTGCAAGCCCGAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: YWPFSRSTQVPL*AQGVEVQARTS Trigger: AGACGTTCGGGCTTGCACCTCAACCCCCTGCGCCAACAATGGAACTTGCGTGGACCTGGAGAAAGGCCAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | CTTGTTGAGCTCTTTCATGGACACCTTCAGGATGTGTaGCTCGGGCTGCTGGGTGTGCTGGAGGCAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVELFHGHLQDV*LGLLGVLEAGA Trigger: GGCACCTGCCTCCAGCACACCCAGCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173812.2 |
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| CDS CAA 90 bp | CAGCCATCCTTGCAGATGCACTGCCATGGTTCCTTGCAGACTCCATaGACACAGCCAGGGGCAGTTACACACTTGTCACAGAGGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: QPSLQMHCHGSLQTP*TQPGAVTHLSQRGP Trigger: GGGTCCCCTCTGTGACAAGTGTGTAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGATGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 90 bp | CAGGAGCATTCGTACTGGCCTTTCTCCAGGTCCACGCAAGTTCCATaGTTGGCGCAGGGGGTTGAGGTGCAAGCCCGAACGTCTATTTCG | + |
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Preference number: 6 (lower is better) Translates to: QEHSYWPFSRSTQVP*LAQGVEVQARTSIS Trigger: CGAAATAGACGTTCGGGCTTGCACCTCAACCCCCTGCGCCAACAATGGAACTTGCGTGGACCTGGAGAAAGGCCAGTACGAATGCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 90 bp | GTGAAGCAGATGGCCTGTCCCTCGGTGAGGAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACCTTCAGGATGTGTTGCTCGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VKQMACPSVRRGVLL*SSFMDTFRMCCSGC Trigger: GCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCATCTGCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000173812.2 |
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| CDS CAA 90 bp | GTGAAGCAGATGGCCTGTCCCTCGGTGAGGAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACCTTCAGGATGTGTTGCTCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VKQMACPSVRRGVLL*SSFMDTFRMCCSGW Trigger: CCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCATCTGCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109846.11 |
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| CDS GCA 72 bp | CCTTGTGCTGGCAGTCCTTTCCAGAGAACCCAGGTGTaGAGGAGCATTCGTACTGGCCTTTCTCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCAGSPFQRTQV*RSIRTGLSPGP Trigger: TGGACCTGGAGAAAGGCCAGTACGAATGCTCCTGCACACCTGGGTTCTCTGGAAAGGACTGCCAGCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CCA 72 bp | ACACACTTGTCACAGAGGGGACCCTCCCAGCCAACATaGCACCTGCAGACATTGTCAGCCTCGCAGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: THLSQRGPSQPT*HLQTLSASQNP Trigger: TGGATTCTGCGAGGCTGACAATGTCTGCAGGTGCCATGTTGGCTGGGAGGGTCCCCTCTGTGACAAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | CTTGTTGAGCTCTTTCATGGACACCTTCAGGATGTGTaGCTCGGGCTGCTGAACAGGCAGCTCGTGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: LVELFHGHLQDV*LGLLNRQLVHP Trigger: GGGGTGCACGAGCTGCCTGTTCAGCAGCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 |
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| CDS CAA 90 bp | ATGGTGAAGCAGATGGCCTGTCCCTCGGTGAGGAGAGGGGTACTCTaGTTGAGCTCTTTCATGGACACCTTCAGGATGTGTTGCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: MVKQMACPSVRRGVL*LSSFMDTFRMCCSG Trigger: GCCCGAGCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCATCTGCTTCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173812.2 |
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| CDS GCA 72 bp | CCACGCAAGTTCCATTGTTGGCGCAGGGGGTTGAGGTaGAAGCCCGAACGTCTATTTCGCAGAATTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PRKFHCWRRGLR*KPERLFRRISR Trigger: ACGGGAAATTCTGCGAAATAGACGTTCGGGCTTGCACCTCAACCCCCTGCGCCAACAATGGAACTTGCGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | ACGCCATCGTTCTCGCATGGGTTAGGGGTACAGCTGTaGGTTGCGGCTACGATCTCACAGAAGTTGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TPSFSHGLGVQL*VAATISQKLPE Trigger: CTCAGGCAACTTCTGTGAGATCGTAGCCGCAACCAACAGCTGTACCCCTAACCCATGCGAGAACGATGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS CAA 72 bp | ATGGCCTGTCCCTCGGTGAGGAGAGGGGTACTCTTGTaGAGCTCTTTCATGGACACCTTCAGGATGTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: MACPSVRRGVLL*SSFMDTFRMCC Trigger: GCAACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173812.2 |
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| CDS CAA 72 bp | CAGATGGCCTGTCCCTCGGTGAGGAGAGGGGTACTCTaGTTGAGCTCTTTCATGGACACCTTCAGGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: QMACPSVRRGVL*LSSFMDTFRMC Trigger: ACACATCCTGAAGGTGTCCATGAAAGAGCTCAACAAGAGTACCCCTCTCCTCACCGAGGGACAGGCCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056110.15 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173812.2 |
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| CDS TCA 72 bp | TGCAGATGCACTGCCATGGTTCCTTGCAGACTCCATTaGCACAGCCAGGGGCAGTTACACACTTGTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: CRCTAMVPCRLH*HSQGQLHTCHR Trigger: TCTGTGACAAGTGTGTAACTGCCCCTGGCTGTGTCAATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS GCA 72 bp | CGTCTATTTCGCAGAATTTCCCGTCCCAGCCATCCTTaGAGATGCACTGCCATGGTTCCTTGCAGACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RLFRRISRPSHP*RCTAMVPCRLH Trigger: ATGGAGTCTGCAAGGAACCATGGCAGTGCATCTGCAAGGATGGCTGGGACGGGAAATTCTGCGAAATAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000124293.3 ENSMUST00000173539.8 |
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| CDS GCA 72 bp | ATGATATTGACCGCCAGCTCCTCGCCGCTGTTATACTaGAACAGGAGGTTCTTCTTCTTGCGAAGCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: MILTASSSPLLY*NRRFFFLRSMW Trigger: CCACATGCTTCGCAAGAAGAAGAACCTCCTGTTGCAGTATAACAGCGGCGAGGAGCTGGCGGTCAATATCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 ENSMUST00000173812.2 |
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| CDS CAA 90 bp | TCCTTGTTGAAAGTGGTCATGTCAATCTTCTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCGCTGTTATACTGCAACAGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLKVVMSIFSGKMI*TASSSPLLYCNRRF Trigger: GAACCTCCTGTTGCAGTATAACAGCGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGAGAAGATTGACATGACCACTTTCAACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 ENSMUST00000173812.2 |
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| CDS CAA 72 bp | AAAGTGGTCATGTCAATCTTCTCGGGGAAGATGATATaGACCGCCAGCTCCTCGCCGCTGTTATACTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: KVVMSIFSGKMI*TASSSPLLYCN Trigger: GTTGCAGTATAACAGCGGCGAGGAGCTGGCGGTCAATATCATCTTCCCCGAGAAGATTGACATGACCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000056110.15 ENSMUST00000109841.9 ENSMUST00000109842.9 ENSMUST00000109843.8 ENSMUST00000109844.11 ENSMUST00000109846.11 ENSMUST00000173539.8 ENSMUST00000173812.2 |
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