Pregenerated sensors for DLEU7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048281Ensembl transcript IDs: ENSMUST00000063169.10, ENSMUST00000225120.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCTGCCCAGTGGTCAATTACTAATGACAGAGCTGGACTCACAATaGCTGACACCGATAGTTCTACAACTAAAGATCACTGTCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: FLPSGQLLMTELDSQ*LTPIVLQLKITVTV Trigger: GACAGTGACAGTGATCTTTAGTTGTAGAACTATCGGTGTCAGTCATTGTGAGTCCAGCTCTGTCATTAGTAATTGACCACTGGGCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR CCA 90 bp | CAGTATGTGATAGTACAAAGTTTAGAAGCAGCTCTTCCTGCCCAGTaGTCAATTACTAATGACAGAGCTGGACTCACAATGACTGACACC | + |
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Preference number: 1 (lower is better) Translates to: QYVIVQSLEAALPAQ*SITNDRAGLTMTDT Trigger: GGTGTCAGTCATTGTGAGTCCAGCTCTGTCATTAGTAATTGACCACTGGGCAGGAAGAGCTGCTTCTAAACTTTGTACTATCACATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR GCA 90 bp | TTTAAAAATATACATACTACATGCTATCATGCTGTAGGCTACAGATaGTCTTGGTCAGACATAGACATGAACTATCAAGTTCTTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: FKNIHTTCYHAVGYR*SWSDIDMNYQVLLA Trigger: GGCCAAAAGAACTTGATAGTTCATGTCTATGTCTGACCAAGAGCATCTGTAGCCTACAGCATGATAGCATGTAGTATGTATATTTTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGGCTGCCTCTTCAACTTCTTCACTATaGTTTTCAGACACTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EGEGFCFLGRASCSLAASSTSSL*FSDTGE Trigger: CTCACCAGTGTCTGAAAACCATAGTGAAGAAGTTGA...AGAGGCAGCCAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACTGGATCAACTTCTTCACTATGGTTTTCAGACACTGGTGAGCGGCATTCAACTAATCACCATGGATaGGGTAGTGTCTTCTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VTGSTSSLWFSDTGERHSTNHHG*GSVFFE Trigger: TTCAAAGAAGACACTACCGCATCCATGGTGATTAGT...TGAATGCCGCTCACCAGTGTCTGAAAACCATAGTGAAGAAGTTGATCCAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGGGCTACAGATGCTCTTaGTCAGACATAGACATGAAC | + |
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Preference number: 2 (lower is better) Translates to: QLKITVTVYNEVPSKQTMGYRCS*SDIDMN Trigger: GTTCATGTCTATGTCTGACCAAGAGCATCTGTAGCC...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTCTGTCTACAATGAAGTaGCCAGTAAACAGACTATGT | + |
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Preference number: 2 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSLSTMK*PVNRLC Trigger: ACATAGTCTGTTTACTGGGCACTTCATTGTAGACAG...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR-3UTR TCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTCAGACTATGTCCCATTaGGTAAATGTTCCATTTACT | + |
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Preference number: 2 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSQTMSH*VNVPFT Trigger: AGTAAATGGAACATTTACTCAATGGGACATAGTCTG...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTAATATACATACTACATaGTATCATGCTGTAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSNIHTT*YHAVGY Trigger: GTAGCCTACAGCATGATAGCATGTAGTATGTATATT...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR CCA 72 bp | AAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTaGCTGCCTCTTGTACTCATACATCTGGGAGATTCT | + |
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Preference number: 3 (lower is better) Translates to: KDSVSLAGPAVV*LPLVLIHLGDS Trigger: AGAATCTCCCAGATGTATGAGTACAAGAGGCAGCCAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTACCCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTAAAGGATTCTGTTTCCTaGGCAGGGCCAGCTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: WYPIVHYHFKWAEQYVIVKDSVS*AGPAVV Trigger: GACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTT...TACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGGGTACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| 3UTR GCA 72 bp | ATACATACTACATGCTATCATGCTGTAGGCTACAGATaGTCTTGGTCAGACATAGACATGAACTATCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: IHTTCYHAVGYR*SWSDIDMNYQV Trigger: AACTTGATAGTTCATGTCTATGTCTGACCAAGAGCATCTGTAGCCTACAGCATGATAGCATGTAGTATGTAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGGCTGCCTCTTGTACTCCGGGTCCGCAGCTaGCCTGGGCGACGAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKDSVSLAGPAVVWLPLVLRVRS*PGRRAW Trigger: CCAGGCTCGTCGCCCAGGCCAGCTGCGGACCCGGAG...TACAAGAGGCAGCCAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GCTGCTGACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTCCCGAGCCAGAGCGCTaGGCATCGCCATCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: AADCLEGEGFCFLGRASCPEPER*ASPSAP Trigger: TGGCGCGGATGGCGATGCGCAGCGCTCTGGCTCGGG...ACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGGCTGCCTCTGGCCCAAGCAGAGTCTaGTCTACGCTGACCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EGEGFCFLGRASCSLAASGPSRV*STLTSS Trigger: GGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCC...AGAGGCAGCCAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGGCTGCCTCTTGTAGGCCCAAGCAGAGTCTaGTCTACGCTGACCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VKDSVSLAGPAVVWLPLVGPSRV*STLTSS Trigger: GGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCC...TACAAGAGGCAGCCAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR CCA 90 bp | GACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGAAGGGCCGCTCCTGCTaGAGAGGCCCAAGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DCLEGEGFCFLGRASCSLKGRSC*RGPSRV Trigger: GACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTT...CAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR TCA 90 bp | GCTGCTGACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTCCACCATTTGGTGGCTaGTGGAAGCCACTAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: AADCLEGEGFCFLGRASCPPFGG*WKPLRA Trigger: CGCCCTTAGTGGCTTCCATCAGCCACCAAATGGTGG...ACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | CTATCATGCTGTAGGCTACAGATGCTCTTGGTCAGACATAGACATGAACTATCACCCGAGCCAGAGCGCTaGGCATCGCCATCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSCCRLQMLLVRHRHELSPEPER*ASPSAP Trigger: TGGCGCGGATGGCGATGCGCAGCGCTCTGGCTCGGG...TGATAGTTCATGTCTATGTCTGACCAAGAGCATCTGTAGCCTACAGCATGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR CCA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGCTCCGGGTCCGCAGCTaGCCTGGGCGACGAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLKITVTVYNEVPSKQTMLRVRS*PGRRAW Trigger: CCAGGCTCGTCGCCCAGGCCAGCTGCGGACCCGGAG...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGTCCTGCTGTAGTAGCTaGAGGGTCTGCAGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DCLEGEGFCFLGRASCSLSCCSS*RVCRAT Trigger: GGTGGCTCTGCAGACCCTGCAGCTACTACAGCAGGA...CAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTAGTCTGAGTAGCTGCAGGGTCTaGAGAGCCACCATTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DCLEGEGFCFLGRASCSLSSCRV*RATIWW Trigger: CCACCAAATGGTGGCTCTGCAGACCCTGCAGCTACT...CAGACTACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR TCA 90 bp | GGGCCAGCTGTAGTCTGGCTGCCTCTTGTACTCATACATCTGGGAGATTCTGTATGTGTGCAAAGAATGTaGATATGGGAGGGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPAVVWLPLVLIHLGDSVCVQRM*IWEGGQ Trigger: CTGGCCTCCCTCCCATATTCACATTCTTTGCACACA...TACAGAATCTCCCAGATGTATGAGTACAAGAGGCAGCCAGACTACAGCTGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGCCCCAGCCCCACTCCTaGTGTAGTAGCTGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QLKITVTVYNEVPSKQTMPQPHS*CSSCRV Trigger: GACCCTGCAGCTACTACAGCAGGAGTGGGGCTGGGG...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | CTATCATGCTGTAGGCTACAGATGCTCTTGGTCAGACATAGACATGAACTATCAGTCAGCAGTGGGGGCTaGAGGTCTCACCTTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSCCRLQMLLVRHRHELSVSSGG*RSHLQV Trigger: CACCTGAAGGTGAGACCTGCAGCCCCCACTGCTGAC...TGATAGTTCATGTCTATGTCTGACCAAGAGCATCTGTAGCCTACAGCATGATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGTCCTGCTGTAGTAGCTaGAGGGTCTGCAGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QLKITVTVYNEVPSKQTMSCCSS*RVCRAT Trigger: GGTGGCTCTGCAGACCCTGCAGCTACTACAGCAGGA...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | GCTGCTGACTGTTTAGAAGGTGAAGGATTCTGTTTCCTTGGCAGGGCCAGCTGTGTCACACTTACTGTGTaGAAAGAATGTGAATATGGG | + |
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Preference number: 4 (lower is better) Translates to: AADCLEGEGFCFLGRASCVTLTV*KECEYG Trigger: CCCATATTCACATTCTTTGCACACAGTAAGTGTGAC...ACAGCTGGCCCTGCCAAGGAAACAGAATCCTTCACCTTCTAAACAGTCAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| CDS-3UTR CCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTAAGGGCCGCTCCTGCTaGAGAGGCCCAAGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSKGRSC*RGPSRV Trigger: GACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTT...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR TCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTCCACCATTTGGTGGCTaGTGGAAGCCACTAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSPPFGG*WKPLRA Trigger: CGCCCTTAGTGGCTTCCATCAGCCACCAAATGGTGG...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR GCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTAGTAGCTGCAGGGTCTaGAGAGCCACCATTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSSSCRV*RATIWW Trigger: CCACCAAATGGTGGCTCTGCAGACCCTGCAGCTACT...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR TCA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGTGGGAGATTAGCAAGTaGCTGGATCAACTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QLKITVTVYNEVPSKQTMWEISK*LDQLLH Trigger: GTGAAGAAGTTGATCCAGTCACTTGCTAATCTCCCA...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063169.10 |
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| CDS-3UTR CCA 90 bp | CCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACAAAGTTCAACTTCTTCACTATaGTTTTCAGACACTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PIVHYHFKWAEQYVIVQSSTSSL*FSDTGE Trigger: CTCACCAGTGTCTGAAAACCATAGTGAAGAAGTTGA...ACTTTGTACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063169.10 |
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| CDS TCA 90 bp | AGGGCCGCTCCTGCTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTaGCCAGCTCCGAGGTCGAGTCCACCACCCGAGCCAGAGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RAAPAGEAQAESALR*PAPRSSPPPEPERC Trigger: GCAGCGCTCTGGCTCGGGTGGTGGACTCGACCTCGGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS GCA 90 bp | GGGGCTGCAGGTCTCACCTTCAGGTGGACAGGGAAGGGCCGCTCCTaGTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTGACCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GAAGLTFRWTGKGRS*WRGPSRVCSTLTSS Trigger: GGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTTCCCTGTCCACCTGAAGGTGAGACCTGCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| CDS GCA 90 bp | CTAAATTCCACGCTATCCTTCAGGTGGACAGGGAAGGGCCGCTCCTaGTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTGACCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LNSTLSFRWTGKGRS*WRGPSRVCSTLTSS Trigger: GGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTTCCCTGTCCACCTGAAGGATAGCGTGGAATTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063169.10 |
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| CDS-3UTR CAA 90 bp | CAACTAAAGATCACTGTCACTGTCTACAATGAAGTGCCCAGTAAACAGACTATGCTGCAGAGCCACCATTaGGTGGCTGATGGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QLKITVTVYNEVPSKQTMLQSHH*VADGSH Trigger: GTGGCTTCCATCAGCCACCAAATGGTGGCTCTGCAG...CATAGTCTGTTTACTGGGCACTTCATTGTAGACAGTGACAGTGATCTTTAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS-3UTR CAA 90 bp | TGGTACCCCATAGTTCATTATCATTTTAAATGGGCAGAGCAGTATGTGATAGTACTGCAGAGCCACCATTaGGTGGCTGATGGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WYPIVHYHFKWAEQYVIVLQSHH*VADGSH Trigger: GTGGCTTCCATCAGCCACCAAATGGTGGCTCTGCAG...TACTATCACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGGGTACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS CCA 72 bp | GGCGATGGGCACGTGGTCCGGGCCGCGCGGGCTCCCTaGGGCGCTAGGACCGTCGCCCCAGCCCCACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GDGHVVRAARAP*GARTVAPAPLL Trigger: CAGGAGTGGGGCTGGGGCGACGGTCCTAGCGCCCCAGGGAGCCCGCGCGGCCCGGACCACGTGCCCATCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS GCA 72 bp | GCTCCGAGGTCGAGTCCACCACCCGAGCCAGAGCGCTaGGCATCGCCATCCGCGCCAAGGTACAGGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: APRSSPPPEPER*ASPSAPRYRAR Trigger: GCGGGCCCTGTACCTTGGCGCGGATGGCGATGCGCAGCGCTCTGGCTCGGGTGGTGGACTCGACCTCGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS TCA 72 bp | CCTGCTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTaGCCAGCTCCGAGGTCGAGTCCACCACCCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PAGEAQAESALR*PAPRSSPPPEP Trigger: TGGCTCGGGTGGTGGACTCGACCTCGGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS GCA 72 bp | AAGGGCCGCTCCTGCTGGAGAGGCCCAAGCAGAGTCTaGTCTACGCTGACCAGCTCCGAGGTCGAGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: KGRSCWRGPSRV*STLTSSEVEST Trigger: GGTGGACTCGACCTCGGAGCTGGTCAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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| CDS GCA 72 bp | GGTCTCACCTTCAGGTGGACAGGGAAGGGCCGCTCCTaGTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLTFRWTGKGRS*WRGPSRVCSTL Trigger: CAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTTCCCTGTCCACCTGAAGGTGAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225120.2 |
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| CDS GCA 72 bp | ACGCTATCCTTCAGGTGGACAGGGAAGGGCCGCTCCTaGTGGAGAGGCCCAAGCAGAGTCTGCTCTACGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLSFRWTGKGRS*WRGPSRVCSTL Trigger: CAGCGTAGAGCAGACTCTGCTTGGGCCTCTCCAGCAGGAGCGGCCCTTCCCTGTCCACCTGAAGGATAGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063169.10 |
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| CDS CCA 72 bp | TGCTGTAGTAGCTGCAGGGTCTGCAGAGCCACCATTTaGTGGCTGATGGAAGCCACTAAGGGCGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CCSSCRVCRATI*WLMEATKGAGL Trigger: CAGCCCTGCGCCCTTAGTGGCTTCCATCAGCCACCAAATGGTGGCTCTGCAGACCCTGCAGCTACTACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063169.10 ENSMUST00000225120.2 |
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