Pregenerated sensors for DLEC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038060Ensembl transcript IDs: ENSMUST00000055775.13, ENSMUST00000140326.8, ENSMUST00000165231.8
Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTaGTCCTCAACCCTGAGCCAGATTGATGGCCTCAGCTGGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RRASSPIARVPVRQP*SSTLSQIDGLSWGW Trigger: CCAGCCCCAGCTGAGGCCATCAATCTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR TCA 90 bp | CGGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTaGCCAGCGTGGTCCTTGACTTTGTGGACACGCCCAGGTAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: RSPFPSGTGWAGVCH*PAWSLTLWTRPGRG Trigger: ACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 90 bp | GTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCAGCGTGGTCCTTaGCTTTGTGGACACGCCCAGGTAGAGGTTGCTGAACTCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: VEPGGQECAIDQRGP*LCGHAQVEVAELQV Trigger: CACTTGGAGTTCAGCAACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR GCA 90 bp | AGGCTGAACGTTTATTCTGGAAGATGGCCATTCAGAGGGCGGGGCTaGACACATCTCGGTCACCTTTCCCCAGTGGAACCGGGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RLNVYSGRWPFRGRG*THLGHLSPVEPGGQ Trigger: CTGCCCACCCGGTTCCACTGGGGAAAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAATAAACGTTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 90 bp | GCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTaGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: ARQTGLSFKCHTADS*LTFRIWMEMEAFFP Trigger: GGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR GCA 90 bp | AGATCCTCATCTCTCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATaGCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: RSSSLSARQTGLSFK*HTADSWLTFRIWME Trigger: CTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 90 bp | CCAGCGTGGTCCTTGACTTTGTGGACACGCCCAGGTAGAGGTTGCTaGACTCCAAGTGGCTGTTCTTCAGGTACACGTGAGGCTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: PAWSLTLWTRPGRGC*TPSGCSSGTREAAA Trigger: TGCAGCAGCCTCACGTGTACCTGAAGAACAGCCACTTGGAGTTCAGCAACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCACGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 90 bp | TCCTTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTaGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAAAC | + |
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Preference number: 1 (lower is better) Translates to: SFKCHTADSWLTFRI*MEMEAFFPRRSRPN Trigger: GTTTGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 90 bp | GGCTCTATCACCCCAGTGCAGGGCTCCACTTCGATGATATGGCAGTaGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: GSITPVQGSTSMIWQ*LIFPHMYLMGDLLL Trigger: CAACAGCAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGAAGTGGAGCCCTGCACTGGGGTGATAGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 90 bp | TCATTGGGCTCTATCACCCCAGTGCAGGGCTCCACTTCGATGATATaGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTG | + |
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Preference number: 1 (lower is better) Translates to: SLGSITPVQGSTSMI*QWLIFPHMYLMGDL Trigger: CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGAAGTGGAGCCCTGCACTGGGGTGATAGAGCCCAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 90 bp | TGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAAACTaGAGGGCTGGGACATCAATGGTCAAGGCAGGTCCCTTAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: WMEMEAFFPRRSRPN*RAGTSMVKAGPLNE Trigger: CTCATTTAAGGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR GCA 90 bp | GCACTGGGGCATCCAATCCGGTTCTCTCGGTCGAACCAAAGACAGTaGATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: ALGHPIRFSRSNQRQ*MLCLTTGQHSFLWD Trigger: GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTTCGACCGAGAGAACCGGATTGGATGCCCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR TCA 90 bp | GGTGCCTTCATGAATGGTGGATGTGATGGGCACAGTAAACGTGGGTaGACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: GAFMNGGCDGHSKRG*TDLGCSHFIQGPAL Trigger: AAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTACTGTGCCCATCACATCCACCATTCATGAAGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CCA 90 bp | TGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTaGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: CSHFIQGPALALLEL*TVFVVTVIATLLVV Trigger: CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CCA 90 bp | AGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTaGGACGGTGCCTTCATGAATGGTGGATGTGATGGGCACAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: RQCMLCLTTGQHSFL*DGAFMNGGCDGHSK Trigger: TTTACTGTGCCCATCACATCCACCATTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGTCCCCCACATGTATCTaGTGGGTGACTTGCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SARQTGLSFKCHTADSWLSPTCI*WVTCCC Trigger: ACAACAGCAAGTCACCCATCAGATACATGTGGGGGA...CAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR TCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATACCTGCTCCTCAACCCTaGGCCAGATTGATGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TPHLRRRSFILRRASSPIPAPQP*ARLMAS Trigger: TGAGGCCATCAATCTGGCTCAGGGTTGAGGAGCAGG...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACCTTTCATCCTCATCTCTCTCTaGCAGGCAGACTGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FWKMAIQRAGLHTSRSPFILISL*QADWAL Trigger: GAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGAT...GAAAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CAA 90 bp | TTAAATGAGGCCTCAATGTGGAGTACCACCGGGCATGGTGAGTCTTaGATTTCACACTCCAGGTCCTGGCTGGTTGGGCCAGGCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: LNEASMWSTTGHGES*ISHSRSWLVGPGTP Trigger: TGGGGTGCCTGGCCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTACTCCACATTGAGGCCTCATTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR GCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCCCTGTTCGGCAGCCCTaGTCCTCAACCCTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VNVGELILVAVISSRVQLPVRQP*SSTLSQ Trigger: CTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGG...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGGGCAGGTCCCTTAAATaGGGCCTCAATGTGGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: DSWLTFRIWMEMEAFFPRGRSLK*GLNVEY Trigger: GTACTCCACATTGAGGCCTCATTTAAGGGACCTGCC...CCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTCTGGAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACAATCTCCGACCTCATTaGGCTCTATCACCCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VYSGRWPFRGRGCTHLGHNLRPH*ALSPQC Trigger: GCACTGGGGTGATAGAGCCCAATGAGGTCGGAGATT...GTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAATAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACCTTTCACCAAACTGAAGGGCTaGGACATCAATGGTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: FWKMAIQRAGLHTSRSPFTKLKG*DINGQG Trigger: GCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGT...GAAAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR CCA 90 bp | GCGAAGCAGACCAAACTGAAGGGCTGGGACATCAATGGTCAAGGCAGGTCCCTTTCGATGATATGGCAGTaGCTGATCTTCCCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: AKQTKLKGWDINGQGRSLSMIWQ*LIFPHM Trigger: CATGTGGGGGAAGATCAGCCACTGCCATATCATCGA...AAGGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACTGCTGGTGGTGGCCCTaGAAACTGTCACACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDCWWWP*KLSHRA Trigger: GGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCA...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 90 bp | GGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATaGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GCSHFIQGPALALLE*WTVFVVTVIATLLV Trigger: CACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 90 bp | GATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTaGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: DLGCSHFIQGPALAL*ELWTVFVVTVIATL Trigger: CAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 90 bp | ACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTaGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: TDLGCSHFIQGPALA*LELWTVFVVTVIAT Trigger: AGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR TCA 72 bp | CCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCTaGGCCAGATTGATGGCCTCAGCTGGGGCTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: PVYLFGSPAPQP*ARLMASAGAGG Trigger: ACCCCCAGCCCCAGCTGAGGCCATCAATCTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CCA 72 bp | GGCGGGGCTGCACACATCTCGGTCACCTTTCCCCAGTaGAACCGGGTGGGCAGGAGTGTGCCATTGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: GGAAHISVTFPQ*NRVGRSVPLTS Trigger: GCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACCGAGATGTGTGCAGCCCCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | TTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTaGCCAGCGTGGTCCTTGACTTTGTGGACACGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FPSGTGWAGVCH*PAWSLTLWTRP Trigger: TGGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | TGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTaGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGC | + |
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Preference number: 3 (lower is better) Translates to: CHTADSWLTFRI*MEMEAFFPRRS Trigger: GCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | GGTGGGCAGGAGTGTGCCATTGACCAGCGTGGTCCTTaGCTTTGTGGACACGCCCAGGTAGAGGTTGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: GGQECAIDQRGP*LCGHAQVEVAE Trigger: TTCAGCAACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | GGGCATGGTGAGTCTTTGATTTCACACTCCAGGTCCTaGCTGGTTGGGCCAGGCACCCCACCCGTTAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: GHGESLISHSRS*LVGPGTPPVRF Trigger: AAACCTAACGGGTGGGGTGCCTGGCCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | ACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTaGCTGACATTCCGGATCTGGATGGAGATGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TGLSFKCHTADS*LTFRIWMEMEA Trigger: GGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | CCTCAATGTGGAGTACCACCGGGCATGGTGAGTCTTTaGTTTCACACTCCAGGTCCTGGCTGGTTGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PQCGVPPGMVSL*FHTPGPGWLGQ Trigger: CTGGCCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTACTCCACATTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR GCA 72 bp | GTTTATTCTGGAAGATGGCCATTCAGAGGGCGGGGCTaGACACATCTCGGTCACCTTTCCCCAGTGGAACCG | + |
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Preference number: 3 (lower is better) Translates to: VYSGRWPFRGRG*THLGHLSPVEP Trigger: CGGTTCCACTGGGGAAAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAATAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | CCAGGGATGATGAGGGCGTACGGCTCTAAAAGGACCTaGAAGGGTTCCGCCAAGCCTTTCACCTCGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: PGMMRAYGSKRT*KGSAKPFTSIS Trigger: GGAAATCGAGGTGAAAGGCTTGGCGGAACCCTTCCAGGTCCTTTTAGAGCCGTACGCCCTCATCATCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | ATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAAACTaGAGGGCTGGGACATCAATGGTCAAGGCAGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: MEAFFPRRSRPN*RAGTSMVKAGP Trigger: GGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | ACCCCAGTGCAGGGCTCCACTTCGATGATATGGCAGTaGCTGATCTTCCCCCACATGTATCTGATGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: TPVQGSTSMIWQ*LIFPHMYLMGD Trigger: GTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGAAGTGGAGCCCTGCACTGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | TCCTTGACTTTGTGGACACGCCCAGGTAGAGGTTGCTaGACTCCAAGTGGCTGTTCTTCAGGTACACGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLTLWTRPGRGC*TPSGCSSGTRE Trigger: CTCACGTGTACCTGAAGAACAGCCACTTGGAGTTCAGCAACCTCTACCTGGGCGTGTCCACAAAGTCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR-3UTR CAA 90 bp | GCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGTATCTGATGGGTGACTaGCTGTTGTTCCACATCTTA | + |
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Preference number: 3 (lower is better) Translates to: ADIPDLDGDGSLLSQAKQYLMGD*LLFHIL Trigger: TAAGATGTGGAACAACAGCAAGTCACCCATCAGATA...CTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR CCA 72 bp | TTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTaGACGGTCTTTGTAGTGACTGTCATAGCCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: FIQGPALALLEL*TVFVVTVIATL Trigger: CAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CCA 72 bp | ATGCTATGCTTGACCACAGGACAACATTCATTTCTGTaGGACGGTGCCTTCATGAATGGTGGATGTGATGGG | + |
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Preference number: 3 (lower is better) Translates to: MLCLTTGQHSFL*DGAFMNGGCDG Trigger: CCCATCACATCCACCATTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR-3UTR CAA 90 bp | AGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAAACTGAAGGGCTGGGACATATGGGTGACTTGCTGTaGTTCCACATCTTAAAATCT | + |
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Preference number: 3 (lower is better) Translates to: RWKPSFPGEADQTEGLGHMGDLL*FHILKS Trigger: AGATTTTAAGATGTGGAACAACAGCAAGTCACCCAT...ATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| 3UTR TCA 72 bp | ATGAATGGTGGATGTGATGGGCACAGTAAACGTGGGTaGACTGATCTTGGTTGCAGTCATTTCATCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: MNGGCDGHSKRG*TDLGCSHFIQG Trigger: ACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTACTGTGCCCATCACATCCACCATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR GCA 72 bp | TCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTaGTTTGTTGGAATTGTGGACGGTCTTTGTAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SWLQSFHPGSSS*FVGIVDGLCSD Trigger: GTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR GCA 72 bp | CATCCAATCCGGTTCTCTCGGTCGAACCAAAGACAGTaGATGCTATGCTTGACCACAGGACAACATTCATTT | + |
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Preference number: 3 (lower is better) Translates to: HPIRFSRSNQRQ*MLCLTTGQHSF Trigger: AAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTTCGACCGAGAGAACCGGATTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCACCCCACCTTGTGCATaGCCCCTGGGTCGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLTPPCA*PLGRAP Trigger: CGGTGCTCGACCCAGGGGTCATGCACAAGGTGGGGT...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCCACGTGCTGCTGGATaGGTGCTGTCTTCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTPRAAG*VLSSAG Trigger: CCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGG...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCAGGTCCTGGCTGGTTaGGCCAGGCACCCCACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHQVLAG*ARHPTR Trigger: ACGGGTGGGGTGCCTGGCCCAACCAGCCAGGACCTG...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCTCACTGGGGGCAGTTTaGCAGGGGTCTCCACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTSLGAV*QGSPQP Trigger: AGGTTGTGGAGACCCCTGTCAAACTGCCCCCAGTGA...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCCCCACCTTGAGAAATaGAGAAGGGCCTGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTPHLEK*RRAWRP Trigger: GGGTCTCCAGGCCCTTCTTCATTTCTCAAGGTGGGG...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCGGCGGACAGCTGGCTaGCATTCCGGATCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHRRTAG*HSGSGW Trigger: CCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCG...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACACTGTCTGCAGCCGCTaGCACTGGGAGGCCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHTVCSR*HWEASR Trigger: CCTTGAGGCCTCCCAGTGTCAGCGGCTGCAGACAGT...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACACTGATGAGGGGCTCTaGTGTCCCAGCTGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHTDEGL*CPSWPH Trigger: GTGGGGCCAGCTGGGACAGCAGAGCCCCTCATCAGT...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCAGTCCGGGATGAACTaGACGATGTACTGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTQSGMN*TMYWQV Trigger: GACCTGCCAGTACATCGTCCAGTTCATCCCGGACTG...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | ATCTCGGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCCTCCCTGTCCAGCTCTaGCTTGCGCAGGAAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVTFPQWNRVGRSVPLTLPVQL*LAQETL Trigger: CAGCGTTTCCTGCGCAAGTCAGAGCTGGACAGGGAG...GGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACCGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCGCATTTGATGCTGTCTaGGCTGTGTGTCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTAFDAV*AVCLSR Trigger: CCTGGAGAGACACACAGCTCAGACAGCATCAAATGC...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCGGCAGGTCCCTTAAATaGGGCCTCAATGTGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTGRSLK*GLNVEY Trigger: GTACTCCACATTGAGGCCTCATTTAAGGGACCTGCC...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACACTGCAGCTGCCCGTTaGGGGGACAGTGTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHTAAAR*GDSVAR Trigger: TCTAGCCACACTGTCCCCTCAACGGGCAGCTGCAGT...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTCACACTCTGTGAGCTaGCTGCAGTGCTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGRLGSPSNATRRTAGSHSVS*LQCSSA Trigger: GGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGA...GCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCGTCTCCCTGTCAGGGTaGCATTTGATGCTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLVSLSG*HLMLSE Trigger: CTCAGACAGCATCAAATGCCACCCTGACAGGGAGAC...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCAATCTCCGACCTCATTaGGCTCTATCACCCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTNLRPH*ALSPQC Trigger: GCACTGGGGTGATAGAGCCCAATGAGGTCGGAGATT...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCTCGCAGTGGGAAGGGTaGCCCATAAAACACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLSQWEG*PIKHKQ Trigger: CTGCTTGTGTTTTATGGGCCACCCTTCCCACTGCGA...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 72 bp | TTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATaGACCAGCGTGGTCCTTGACTTTGTGGACACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPQWNRVGRSVP*TSVVLDFVDTP Trigger: GGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | TCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGTCTAGACACCACCTaGAGGCTGTCTTCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGRLGSPSNATRRTAGCLDTT*RLSSLG Trigger: CCCCAGTGAAGACAGCCTTCAGGTGGTGTCTAGACA...GCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGCGAGCACCGTGGGCGTaGAGGAGATGTAGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VALKTVTQGLAHTTPQKERAPWA*RRCRWS Trigger: GGACCATCTACATCTCCTTCACGCCCACGGTGCTCG...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTCGCCGCCGCCGCCACTaGAGCTGCCCGTTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGIVDGLCSDCHSHSAGGRRRRH*SCPLRG Trigger: TCCCCTCAACGGGCAGCTGCAGTGGCGGCGGCGGCG...ACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCGACGCTGTTTATAGATaGCTCGCGCCTGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPGRLGSPSNATRRTAGDAVYR*LAPAAA Trigger: AGCTGCAGCAGGCGCGAGCCATCTATAAACAGCGTC...GCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | AGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCTGAGCCAGCACGCAAGAATCGGCTaGTGGAGGTGGTGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPIARVPVRQPCSSTLSQHARIG*WRWCSV Trigger: TACAGAACACCACCTCCACCAGCCGATTCTTGCGTG...CTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCGGCGGCCAGCTCTTTTaGGGCATGATACAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTGGQLF*GMIQNL Trigger: CAAATTCTGTATCATGCCCCAAAAGAGCTGGCCGCC...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCTCCACTTCGATGATATaGCAGTGGCTGATCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLSTSMI*QWLIFP Trigger: GGGGAAGATCAGCCACTGCCATATCATCGAAGTGGA...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCAGAATTTGCCGACGCTaGAGCCCACATTTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTRICRR*SPHFCR Trigger: TCTGCAAAAATGTGGGCTTCAGCGTCGGCAAATTCT...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | CACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCCGGCCGAGGAAGCTGTaGATTGCTGCTCTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTADSWLTFRIWMEMEAFRPRKL*IAALPC Trigger: GCAAGGAAGAGCAGCAATGCACAGCTTCCTCGGCCG...GAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR GCA 90 bp | GAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACCTTTCCCCAGGGATTTGTCTTTGGGTaGTGGGCAAAACGGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGHSEGGAAHISVTFPQGFVFG*WAKRHG Trigger: CCCGTGCCGTTTTGCCCAGCACCCAAAGACAAATCC...CTGGGGAAAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR GCA 90 bp | GGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGATCACACTCTGTGAGCTaGCTGCAGTGCTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPENCHTGPGSHHTSEGSHSVS*LQCSSA Trigger: GGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGA...TCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGCTTTGGCCTTCGAGATaGAGCCCAAGCTGTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VALKTVTQGLAHTTPQKELWPSR*SPSCPR Trigger: CCGTGGACAGCTTGGGCTCCATCTCGAAGGCCAAAG...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCGCAAGAATCGGCTGGTaGAGGTGGTGTTCTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGRLGSPSNATRRTAGARIGW*RWCSVE Trigger: CTCTACAGAACACCACCTCCACCAGCCGATTCTTGC...GCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGACTCCAGGTCCTGGCTaGTTGGGCCAGGCACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQTPGPG*LGQAPH Trigger: GTGGGGTGCCTGGCCCAACCAGCCAGGACCTGGAGT...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCCGTCAGATTCCACTATaGAGATGGTCACCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLRQIPL*RWSPEV Trigger: GACTTCAGGTGACCATCTCCATAGTGGAATCTGACG...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACAGCTCAGGCAGCAGCTaGGGTTCATCAGGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHSSGSS*GSSGRS Trigger: AGATCTACCTGATGAACCTCAGCTGCTGCCTGAGCT...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCAGCGTCTCTGCATTCAGGGATaGTCTTCTCTCTGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLSPVEPGGQECAIDQRLCIQG*SSLWLA Trigger: AGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAG...ACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCGAGAGACTGTCATTGTaGACAAATCTGCTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASSPIARVPVRQPCSSTERLSL*TNLLEV Trigger: GACCTCAAGCAGATTTGTGCACAATGACAGTCTCTC...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGACCAGCGGCTTCTCCATaGCAGACACGTGACAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGPENCHTGPGSHHTSEGPAASP*QTRDKG Trigger: TCCTTTGTCACGTGTCTGGCATGGAGAAGCCGCTGG...TCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAGATGCGCGCCTGCTGCAGCTaGTCAAGGAACTCTTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKCHTADSWLTFRIWMEMRACCS*SRNSSW Trigger: CCACGAAGAGTTCCTTGACCAGCTGCAGCAGGCGCG...CATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATCTTTGGCCTTCGAGATaGAGCCCAAGCTGTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLQMPHGGQLADIPDLDLWPSR*SPSCPR Trigger: CCGTGGACAGCTTGGGCTCCATCTCGAAGGCCAAAG...ATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | AGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCTGAGCCAGAGACTTGCCTCCATGTaGTGTGTTAGGCGGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPIARVPVRQPCSSTLSQRLASM*CVRREK Trigger: TTTTTCCCGCCTAACACACCACATGGAGGCAAGTCT...CTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATATCTGCTCTTCGGCCCTaGTGCCGCCGCCGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVISALRP*CRRRRH Trigger: GTGGCGGCGGCGGCGGCACCAGGGCCGAAGAGCAGA...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGATGCGCGTGTCTCACGTaGCCATTCAGATCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPENCHTGPGSHHTSEGCACLT*PFRSSL Trigger: GAGACTGGATCTGAATGGCCACGTGAGACACGCGCA...TCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACATGATCCTCCCTGGCTaGTTCCTCTTGTCCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSAGGGPENCHTGPGSHMILPG*FLLSQQ Trigger: CTGTTGGGACAAGAGGAACCAGCCAGGGAGGATCAT...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGTTGGGCCAGGCACCCCACCCGTTAGGTTTAACTCAAAATCTCCGACCGTGCACGGGCCTGCATaGTATGTCTCTCCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLVGPGTPPVRFNSKSPTVHGPA*YVSPTW Trigger: CCATGTTGGAGAGACATATCATGCAGGCCCGTGCAC...GGTCGGAGATTTTGAGTTAAACCTAACGGGTGGGGTGCCTGGCCCAACCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGTACCACCGGGCATGGTGAGTCTTTGATTTCACACTCCAGGTCCTGGCTGTCACTGGGGGCAGTTTaGCAGGGGTCTCCACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WSTTGHGESLISHSRSWLSLGAV*QGSPQP Trigger: AGGTTGTGGAGACCCCTGTCAAACTGCCCCCAGTGA...CAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTACTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGCTCCCTGTCCAGCTCTaGCTTGCGCAGGAAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQLPVQL*LAQETL Trigger: CAGCGTTTCCTGCGCAAGTCAGAGCTGGACAGGGAG...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAGATGAGTCGTCACACTCTGTaGGCTGCCTGCAGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKCHTADSWLTFRIWMEMSRHTL*AACSAP Trigger: AGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACT...CATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCTTTCCACCAGAAATATaGATCAGATCCAAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KEGLQPHSPCTCSAALLLFPPEI*IRSKAT Trigger: GGTGGCTTTGGATCTGATTCATATTTCTGGTGGAAA...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | ATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGGTGGCCGGCGGGCACTaGCTCGTGCCTCTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MLCLTTGQHSFLWDGAFMVAGGH*LVPLQD Trigger: ATCCTGCAGAGGCACGAGGCAGTGCCCGCCGGCCAC...CATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCTGAGCCAGTTGAACATCCAAGGGTaGATTTGTCTTTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPIARVPVRQPCSSTLSQLNIQG*ICLWVL Trigger: CAGCACCCAAAGACAAATCCACCCTTGGATGTTCAA...CTGGCTCAGGGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGGCAAGAATCGGCTGGTaGAGGTGGTGTTCTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VALKTVTQGLAHTTPQKEARIGW*RWCSVE Trigger: CTCTACAGAACACCACCTCCACCAGCCGATTCTTGC...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCCCTCCAATGAGGCAGTaGCCGCAGTCCAACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DIPDLDGDGSLLSQAKQTPPMRQ*PQSNTG Trigger: ACCAGTGTTGGACTGCGGCCACTGCCTCATTGGAGG...GGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | ATCTCGGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCGGCGGCCAGCTCTTTTaGGGCATGATACAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVTFPQWNRVGRSVPLTGGQLF*GMIQNL Trigger: CAAATTCTGTATCATGCCCCAAAAGAGCTGGCCGCC...GGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACCGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGGGATCTGGATGGAGATaGAAGCCTTCTTTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VALKTVTQGLAHTTPQKEGSGWR*KPSFPG Trigger: GCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCC...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATAGAAGAACACCTGAAGTaGGCTGGAGGTAGGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPIEEHLK*AGGRGC Trigger: GCACCCCCTACCTCCAGCCCACTTCAGGTGTTCTTC...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 72 bp | GCCTCAATGTGGAGTACCACCGGGCATGGTGAGTCTTaGATTTCACACTCCAGGTCCTGGCTGGTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASMWSTTGHGES*ISHSRSWLVGP Trigger: TGGCCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTACTCCACATTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGATGGAGATGGTCACCTaGAGTCCCAGGGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQMEMVT*SPRGFP Trigger: TGGGAAGCCCCTGGGACTTCAGGTGACCATCTCCAT...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGTTGGGCCAGGCACCCCACCCGTTAGGTTTAACTCAAAATCTCCGACCGAGGAAGCTGTGCATTaGTGCTCTTCCTTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLVGPGTPPVRFNSKSPTEEAVH*CSSLLS Trigger: CGAGAGCAAGGAAGAGCAGCAATGCACAGCTTCCTC...GGTCGGAGATTTTGAGTTAAACCTAACGGGTGGGGTGCCTGGCCCAACCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGTCCCGTGCACGGGCCTaGATGATATGTCTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWLTFRIWMEMEAFFPRSRARA*MICLSN Trigger: GTTGGAGAGACATATCATGCAGGCCCGTGCACGGGA...CCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR GCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGGGGCTTCCCAGAGATaGCCAGGACCAGCGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVGASQR*PGPAAS Trigger: AGAAGCCGCTGGTCCTGGGCATCTCTGGGAAGCCCC...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAATGACAGACATGATCTaGTCTTCGGCCCTGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VDGLCSDCHSHSAGGGPEMTDMI*SSALVP Trigger: CGGCACCAGGGCCGAAGAGCAGATCATGTCTGTCAT...TTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCGTTGGAGCTCTTCACTaGGGCCCAGCAGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLVGALH*GPAGPV Trigger: CACAGGGCCTGCTGGGCCCCAGTGAAGAGCTCCAAC...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAATTCCACTATGGAGATaGTCACCTGAAGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGPENCHTGPGSHHTSEGIPLWR*SPEVPG Trigger: CCCTGGGACTTCAGGTGACCATCTCCATAGTGGAAT...TCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATAGCGTCGCATTCGGCCTaGAATCTGTCTGTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPIASHSA*NLSVCL Trigger: GAGACAGACAGACAGATTCCAGGCCGAATGCGACGC...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGTGCACGGGCCTGCATaGTATGTCTCTCCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQVHGPA*YVSPTW Trigger: CCATGTTGGAGAGACATATCATGCAGGCCCGTGCAC...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTACCACCGGGCATGGTGAGTCTTTGATTTCACACTCCAGGTCCTGGCTGTGCTCAAAGGGACGATaGGAGACTTGCCTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSTTGHGESLISHSRSWLCSKGR*ETCLHV Trigger: CACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCA...CAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | CTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTATGCTCAAAGGGACGATaGGAGACTTGCCTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHRAWLTPHLRRRSFILCSKGR*ETCLHV Trigger: CACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCA...TAGGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATAGCTCTTTTGGGGCATaGTACAGAATTTGCCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLQMPHGGQLADIPDLDSSFGA*YRICRR Trigger: GCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCT...ATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | GGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCAGCGTTTTCCACCAGAAATATaGATCAGATCCAAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GHLSPVEPGGQECAIDQRFPPEI*IRSKAT Trigger: GGTGGCTTTGGATCTGATTCATATTTCTGGTGGAAA...ACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGTCCATGCCAGACACGTaGCAAAGGAGAACCAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VALKTVTQGLAHTTPQKESMPDT*QRRTKL Trigger: CAATTTGGTTCTCCTTTGTCACGTGTCTGGCATGGA...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | CTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGCGGATGTCACAGTaGCTGGAGTTATACAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHRAWLTPHLRRRSFILRRMSQ*LELYRR Trigger: CCGTCTGTATAACTCCAGTCACTGTGACATCCGCCT...TAGGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCGAGACCCCAAACGCATaGTCCTCCCTGGCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLETPNA*SSLAGS Trigger: GGAACCAGCCAGGGAGGATCATGCGTTTGGGGTCTC...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | ATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGCCTCCAGCAGTCCACTaGCTGGGGAGACCCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: MLCLTTGQHSFLWDGAFMPPAVH*LGRPQT Trigger: CGTTTGGGGTCTCCCCAGGCAGTGGACTGCTGGAGG...CATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAGGACTCGAGCTGGTGTaGGACAGACAAAAACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDGLCSDCHSHSAGGGPEGLELV*DRQKLG Trigger: ACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCC...TTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ATCTCGGTCACCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTGACCTTGAACATCCAAGGGTaGATTTGTCTTTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVTFPQWNRVGRSVPLTLNIQG*ICLWVL Trigger: CAGCACCCAAAGACAAATCCACCCTTGGATGTTCAA...GGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGGTGACCGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | AACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCGCCTGCTTGTCTTCTTaGCAGAATCTGTGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCHTGPGSHHTSEGDPSSACLSS*QNLWSS Trigger: AGAGGACCACAGATTCTGTCAAGAAGACAAGCAGGC...GGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | TCTGCCAGGCAGACTGGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGGTGTCTCCACCAAAATaGAATCATCAAAATCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SARQTGLSFKCHTADSWLVSPPK*NHQNRQ Trigger: TTGGCGATTTTGATGATTTCATTTTGGTGGAGACAC...CAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATATCCCCCACATGTATCTaGTGGGTGACTTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPISPTCI*WVTCCC Trigger: ACAACAGCAAGTCACCCATCAGATACATGTGGGGGA...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATATACCACCGGGCATGGTaGGTCTTTGATTTCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPIYHRAW*VFDFTL Trigger: GAGTGTGAAATCAAAGACTCACCATGCCCGGTGGTA...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATAGCAGCTCCTTTCCTGTaGGATAACATGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPIAAPFL*DNMLST Trigger: TGTGGAGAGCATGTTATCTCACAGGAAAGGAGCTGC...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | AGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAAACTGAAGGGCTGGGACATGCTCCACTCAGGCTCTaGATTCAGGGATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWKPSFPGEADQTEGLGHAPLRL*IQGCSS Trigger: AGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGC...ATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR GCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTCGCCGCCACTGCAGCTaGCCGTTGAGGGGACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCRRHCS*PLRGQC Trigger: ACACTGTCCCCTCAACGGGCAGCTGCAGTGGCGGCG...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCGGGCACTGCCTCGTaGCTCTGCAGGATGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIAGTAS*LCRMTD Trigger: GTCTGTCATCCTGCAGAGGCACGAGGCAGTGCCCGC...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGCGCGCCTGCTGCAGCTaGTCAAGGAACTCTTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLCLTTGQHSFLWDGAFMRACCS*SRNSSW Trigger: CCACGAAGAGTTCCTTGACCAGCTGCAGCAGGCGCG...CATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | CCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTGTCTGCTCTGTTTGGTaGTGTGTTCTGTTTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHGGQLADIPDLDGDGSLVCSVW*CVLFLQ Trigger: TTGCAGAAACAGAACACACCACCAAACAGAGCAGAC...AAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGGGATGCTCTTCTCTCTaGCTTGCTCAAAGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSWLTFRIWMEMEAFFPRGCSSL*LAQRDD Trigger: ATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCC...CCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCCCTCCAATGAGGCAGTaGCCGCAGTCCAACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLPPMRQ*PQSNTG Trigger: ACCAGTGTTGGACTGCGGCCACTGCCTCATTGGAGG...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | ACCACCGGGCATGGTGAGTCTTTGATTTCACACTCCAGGTCCTGGCTGGTTGGGTTCTTTGCGGTGGACTaGACGTTTTCAGGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTGHGESLISHSRSWLVGFFAVD*TFSGSN Trigger: GTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAA...CCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTACTGACATTCCGGATCTaGATGGAGATGGAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHRAWLTPHLRRRSFILLTFRI*MEMEAF Trigger: GAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAG...TAGGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTCCAGCAGGCCCTGTGTaGGAGAGACTGTCATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGIVDGLCSDCHSHSAGGPAGPV*ERLSLC Trigger: GCACAATGACAGTCTCTCCCACACAGGGCCTGCTGG...ACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | ACACCACACCTCAGAAGGAGATCCTTCATCCTAAGGAGGGCCTCCAGCCCCATATCTCCTCCAGAGATCTaGGTCCCAAACCTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TPHLRRRSFILRRASSPISPPEI*VPNLVI Trigger: TATCACCAGGTTTGGGACCCAGATCTCTGGAGGAGA...TATGGGGCTGGAGGCCCTCCTTAGGATGAAGGATCTCCTTCTGAGGTGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAATTGGTCAGTTTCAGATaGCGGGTGGTAATCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDGLCSDCHSHSAGGGPELVSFR*RVVIRS Trigger: TGACCGGATTACCACCCGCCATCTGAAACTGACCAA...TTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCAGCCTGCTTGTCTTCTTaGCAGAATCTGTGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFRIWMEMEAFFPRRSRPACLSS*QNLWSS Trigger: AGAGGACCACAGATTCTGTCAAGAAGACAAGCAGGC...TGGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | ATGATGAGGGCGTACGGCTCTAAAAGGACCTGGAAGGGTTCCGCCAAGCCTTTCGGGTTTTTCAGGAAGTaGTTCCTGTTCTCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MMRAYGSKRTWKGSAKPFGFFRK*FLFSML Trigger: CAGCATGGAGAACAGGAATCACTTCCTGAAAAACCC...GAAAGGCTTGGCGGAACCCTTCCAGGTCCTTTTAGAGCCGTACGCCCTCATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACTGCCCTTCTCGGGGATaGTGGAGAAGGCTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDCPSRG*WRRLSP Trigger: GGGAGACAGCCTTCTCCATCATCCCCGAGAAGGGCA...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGTGAAAAACTCAGGATaGACTCTTGGTCCGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQVKNSG*TLGPSG Trigger: CCCACTCGGACCAAGAGTTCATCCTGAGTTTTTCAC...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | AACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTGTTGGCACAGCCTGTaGTGTCAATACATAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NCHTGPGSHHTSEGDPSSCWHSL*CQYIAP Trigger: AGGAGCTATGTATTGACATCACAGGCTGTGCCAACA...GGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAACCAACTGCTTGGGGCTaGTACGGTATATGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AMLDHRTTFISVGRCLHEPTAWG*YGICGR Trigger: CCGGCCACATATACCGTATCAGCCCCAAGCAGTTGG...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGCTTCTAGAACCATTTaGAGTACACTGTGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGPENCHTGPGSHHTSEGASRTI*STLWKH Trigger: GTGTTTCCACAGTGTACTGCAAATGGTTCTAGAAGC...TCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTAGGCTCCCAGCATaGCCTGGGAGATGTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDGRLPA*PGRCGE Trigger: TTCCCCACATCTCCCAGGGCATGCTGGGAGCCTACC...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGCAGTCCGGGATGAACTaGACGATGTACTGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMIWQWLIFPHMYLMGDLQSGMN*TMYWQV Trigger: GACCTGCCAGTACATCGTCCAGTTCATCCCGGACTG...CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | AACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCCATTCCGGATCTGGATaGAGATGGAAGCCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCHTGPGSHHTSEGDPSSHSGSG*RWKPSF Trigger: GAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATG...GGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACCACACGGCGGACAGCTaGCTGACATTCCGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDHTADS*LTFRIW Trigger: CCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTG...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAAGTCGTCACACTCTGTaGGCTGCCTGCAGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVISRHTL*AACSAP Trigger: AGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACT...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCGACGGAGAGATCTGGTaGCTGTATCTCCTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLDGEIW*LYLLQR Trigger: TCTCTGGAGGAGATACAGTCACCAGATCTCTCCGTC...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGGGTTGAAGAACACCTaGAGTGGGCTGGAGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIGLKNT*SGLEVG Trigger: CCCTACCTCCAGCCCACTTCAGGTGTTCTTCAACCC...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGAGGAAGCTGTGCATTaGTGCTCTTCCTTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVEEAVH*CSSLLS Trigger: CGAGAGCAAGGAAGAGCAGCAATGCACAGCTTCCTC...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | CACCCGTTAGGTTTAACTCAAAATCTCCGACCTCATTGGGCTCTATCACCCCAGGGACTCGAGCTGGTGTaGGACAGACAAAAACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPLGLTQNLRPHWALSPQGLELV*DRQKLG Trigger: ACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCC...CTGGGGTGATAGAGCCCAATGAGGTCGGAGATTTTGAGTTAAACCTAACGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | TCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGCACGCAAGAATCGGCTaGTGGAGGTGGTGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SMIWQWLIFPHMYLMGDLHARIG*WRWCSV Trigger: TACAGAACACCACCTCCACCAGCCGATTCTTGCGTG...CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTGGTCCTTGACTTTGTaGACACGCCCAGGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLWSLTL*TRPGRG Trigger: ACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCA...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAAGAAGCTTTCCCCAGTaGAACCGGGTGGGCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIRSFPQ*NRVGRS Trigger: ACTCCTGCCCACCCGGTTCCACTGGGGAAAGCTTCT...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGATGTCACAGTGACTaGAGTTATACAGACGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVTVIATLLVVALKTVTQGCHSD*SYTDGE Trigger: CTCTCCGTCTGTATAACTCCAGTCACTGTGACATCC...CTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCACTTCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGACCACCTCCTTTATCTaGCAGTTGTCACACACGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSTSMIWQWLIFPHMYLMTTSFI*QLSHTM Trigger: CATCGTGTGTGACAACTGTCAGATAAAGGAGGTGGT...CATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGAAGTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGGCATGGTGAGTCTTTaGTTTCACACTCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVGMVSL*FHTPGP Trigger: AGGACCTGGAGTGTGAAATCAAAGACTCACCATGCC...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATACCTTATCCAAGCTCATaGAGCCCAGGGCATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIPYPSS*SPGHSQ Trigger: CTGGCTATGCCCTGGGCTTCATGAGCTTGGATAAGG...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTCGGCCGAGGAAGCTGTaGATTGCTGCTCTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCRPRKL*IAALPC Trigger: GCAAGGAAGAGCAGCAATGCACAGCTTCCTCGGCCG...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGATTTGTCTTTGGGTaGTGGGCAAAACGGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDGFVFG*WAKRHG Trigger: CCCGTGCCGTTTTGCCCAGCACCCAAAGACAAATCC...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAAGCTCCACTCAGGCTCTaGATTCAGGGATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMLDHRTTFISVGRCLHEAPLRL*IQGCSS Trigger: AGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGC...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACATCCTCATCTCTCTCTaGCAGGCAGACTGGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDILISL*QADWAL Trigger: GAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGAT...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TATTCTGGAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACCTTCCACTTCTTATTCTTTaGCCTGCTTGTCTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWPFRGRGCTHLGHLPLLIL*PACLLD Trigger: GTCAAGAAGACAAGCAGGCCAAAGAATAAGAAGTGG...AAGGTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | GGCTCCACTTCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGAGACTTGCCTCCATGTaGTGTGTTAGGCGGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSTSMIWQWLIFPHMYLMRLASM*CVRREK Trigger: TTTTTCCCGCCTAACACACCACATGGAGGCAAGTCT...CATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGAAGTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGACCAAACTGAAGGGCTaGGACATCAATGGTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVTKLKG*DINGQG Trigger: GCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGT...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACCTCTGCCAGGCAGACTaGGCTCTCCTTCAAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDLCQAD*ALLQMP Trigger: TGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAG...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGTCTTGATCTCGCAGTaGGAAGGGTGGCCCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVVLISQ*EGWPIK Trigger: TTTTATGGGCCACCCTTCCCACTGCGAGATCAAGAC...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| 3UTR CAA 72 bp | GATGTGATGGGCACAGTAAACGTGGGTGAACTGATCTaGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVMGTVNVGELI*VAVISSRVQLL Trigger: CAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTACTGTGCCCATCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | CTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTAGTGTCTCCACCAAAATaGAATCATCAAAATCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHRAWLTPHLRRRSFILVSPPK*NHQNRQ Trigger: TTGGCGATTTTGATGATTTCATTTTGGTGGAGACAC...TAGGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGACCCCACATTTTTGCAGATaGATTTGGTTATCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: DIPDLDGDGSLLSQAKQTPHFCR*IWLSSP Trigger: GGGTGAAGATAACCAAATTCATCTGCAAAAATGTGG...GGTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR TCA 90 bp | AACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCCCACATTTTTGCAGATaGATTTGGTTATCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: NCHTGPGSHHTSEGDPSSPHFCR*IWLSSP Trigger: GGGTGAAGATAACCAAATTCATCTGCAAAAATGTGG...GGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | TCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGAGAATTTGCCGACGCTaGAGCCCACATTTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMIWQWLIFPHMYLMGDLRICRR*SPHFCR Trigger: TCTGCAAAAATGTGGGCTTCAGCGTCGGCAAATTCT...CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR TCA 90 bp | ATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAGCTCTTTTGGGGCATaGTACAGAATTTGCCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLTTGQHSFLWDGAFMSSFGA*YRICRR Trigger: GCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCT...CATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTACCACCTCCTTTATCTaGCAGTTGTCACACACGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGIVDGLCSDCHSHSAGGTTSFI*QLSHTM Trigger: CATCGTGTGTGACAACTGTCAGATAAAGGAGGTGGT...ACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATACGAAGCAGACCAAACTaGAGGGCTGGGACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIRSRPN*RAGTSM Trigger: CATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCG...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR GCA 90 bp | TCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGTTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMIWQWLIFPHMYLMGDLFLMMS*FFAVDW Trigger: CCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAA...CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATACCAGGCATCAGAGGCTaGAGGTTGGGTTTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIPGIRG*RLGFMI Trigger: GATCATGAAACCCAACCTGCAGCCTCTGATGCCTGG...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CCA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAATCGATGATATGGCAGTaGCTGATCTTCCCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: AMLDHRTTFISVGRCLHESMIWQ*LIFPHM Trigger: CATGTGGGGGAAGATCAGCCACTGCCATATCATCGA...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| 3UTR CAA 72 bp | GGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTaGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSHFIQGPALA*LELWTVFVVTV Trigger: GACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAAGGGTTTTTCAGGAAGTaGTTCCTGTTCTCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AMLDHRTTFISVGRCLHEGFFRK*FLFSML Trigger: CAGCATGGAGAACAGGAATCACTTCCTGAAAAACCC...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTCCGCCAAGCCTTTCACCTCGATTTCCAGGACGATCATGTCATCCACTCACTGTGGAAACACTTaGGGTAGCATTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSAKPFTSISRTIMSSTHCGNT*GSISDD Trigger: ATCATCAGAAATGCTACCTCAAGTGTTTCCACAGTG...AGTGGATGACATGATCGTCCTGGAAATCGAGGTGAAAGGCTTGGCGGAACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACCTCTGCATTCAGGGATaGTCTTCTCTCTGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDLCIQG*SSLWLA Trigger: AGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAG...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTTTGGGTTTCATGATCTaGCAGTGGAAGGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCLGFMI*QWKASS Trigger: GGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAA...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | CCGTTAGGTTTAACTCAAAATCTCCGACCTCATTGGGCTCTATCACCCCAGTGCGTAGTCTGCTCTGTTTaGTGGTGTGTTCTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGLTQNLRPHWALSPQCVVCSV*WCVLFL Trigger: CAGAAACAGAACACACCACCAAACAGAGCAGACTAC...GCACTGGGGTGATAGAGCCCAATGAGGTCGGAGATTTTGAGTTAAACCTAACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CCA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCGTAGTCTGCTCTGTTTaGTGGTGTGTTCTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNVGELILVAVISSRVQLVVCSV*WCVLFL Trigger: CAGAAACAGAACACACCACCAAACAGAGCAGACTAC...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTTTCATGATCTGCCAGTaGAAGGCCAGCTCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCFMICQ*KASSTC Trigger: ACACGTGGAGCTGGCCTTCCACTGGCAGATCATGAA...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | GTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTCTTGAGCTTGTAAGGTaGAAAACTCAGGATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VGIVDGLCSDCHSHSAGGLELVR*KTQDEL Trigger: GAGTTCATCCTGAGTTTTTCACCTTACAAGCTCAAG...ACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR GCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATATTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIFLMMS*FFAVDW Trigger: CCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAA...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTGGATGCTCTTCTCTCTaGCTTGCTCAAAGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCGCSSL*LAQRDD Trigger: ATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCC...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATATTCTTTGCGGTGGACTaGACGTTTTCAGGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIFFAVD*TFSGSN Trigger: GTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAA...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | ATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATTGTGTTGAGGGGACAGTGTaGCTAGACACTGAGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: ILVAVISSRVQLLLCWNCVEGTV*LDTETL Trigger: CAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAAC...ACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATGACTGCAACCAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| 3UTR CAA 72 bp | CATTTCATCCAGGGTCCAGCTCTTGCTTTGTTGGAATaGTGGACGGTCTTTGTAGTGACTGTCATAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HFIQGPALALLE*WTVFVVTVIAT Trigger: AGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACCCTGGATGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR TCA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACCATGTATCTGATGGGTaGCTTGCTGTTGTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDHVSDG*LAVVPH Trigger: ATGTGGAACAACAGCAAGTCACCCATCAGATACATG...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGTCTGCTCTGTTTGGTaGTGTGTTCTGTTTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIVCSVW*CVLFLQ Trigger: TTGCAGAAACAGAACACACCACCAAACAGAGCAGAC...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGCATACAGGATTTCAGTaGTGTTGGTCAGTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LELWTVFVVTVIATLLVVHTGFQ*CWSVSD Trigger: ATCTGAAACTGACCAACACCACTGAAATCCTGTATG...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGCTCTTGCTTTGTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATACCACTTCTTATTCTTTaGCCTGCTTGTCTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPALALLELWTVFVVTVIPLLIL*PACLLD Trigger: GTCAAGAAGACAAGCAGGCCAAAGAATAAGAAGTGG...TATGACAGTCACTACAAAGACCGTCCACAATTCCAACAAAGCAAGAGCTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS TCA 90 bp | CCGGACCCGTTCTCCACTTCCAGCTCCAGGACTGTCTGCAGCCGCTaGCACTGGGAGGCCTCAAGGGTGATGGTCACTCTGCACTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDPFSTSSSRTVCSR*HWEASRVMVTLHSP Trigger: GGGGGAGTGCAGAGTGACCATCACCCTTGAGGCCTCCCAGTGTCAGCGGCTGCAGACAGTCCTGGAGCTGGAAGTGGAGAACGGGTCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS-3UTR CAA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACGAGGTAGGGGGTGCATaGGTGGCTCGGGCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHSAGGGPENCHTGPGSHEVGGA*VARASS Trigger: GCTGGAGGCCCGAGCCACCAATGCACCCCCTACCTC...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CAA 90 bp | AAGGAGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCCGAGGAAGCTGTGCATaGCTGCTCTTCCTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KEGLQPHSPCTCSAALLLRGSCA*LLFLAL Trigger: GAGAGCAAGGAAGAGCAGCAATGCACAGCTTCCTCG...GAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS GCA 90 bp | TCTCCACAAAGTCCAGCCTTTCCTTCTTGGCCACGTGCTGCTGGATaGGTGCTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPQSPAFPSWPRAAG*VLSSAGQEARQGRW Trigger: CCAGCGTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | TGCTTGGGGCTGATACGGTATATGTGGCCGGCGGGCACTGCCTCGTaGCTCTGCAGGATGACAGACATGATCTGCTCTTCGGCCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLGLIRYMWPAGTAS*LCRMTDMICSSALV Trigger: CACCAGGGCCGAAGAGCAGATCATGTCTGTCATCCTGCAGAGGCACGAGGCAGTGCCCGCCGGCCACATATACCGTATCAGCCCCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | GGATGCGTGCTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGACGCTaGTCTTCTTGTACAGGCTGTCCTGGGAGCTCCCGAAGTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCVLSSAGQEARQGR*SSCTGCPGSSRSTP Trigger: TGGAGTACTTCGGGAGCTCCCAGGACAGCCTGTACAAGAAGACCAGCGTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | CCACCAGCATGTTGTCCTGAGGACGGATCATCAGCCACTGGCCTGTaGAGGCCGTCCCTTCTTCACACTGATGAGGGGCTCTGCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPACCPEDGSSATGL*RPSLLHTDEGLCCP Trigger: GGGACAGCAGAGCCCCTCATCAGTGTGAAGAAGGGACGGCCTCCACAGGCCAGTGGCTGATGATCCGTCCTCAGGACAACATGCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | GGTCAAGGAACTCTTCGTGGCGCGCATCCTCACTGCCGCGGGCCTTaGTCAAACTGTCGCTCAAGTCATCTCCGATCACCTGGGCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GQGTLRGAHPHCRGP*SNCRSSHLRSPGRC Trigger: ACACCGCCCAGGTGATCGGAGATGACTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGTTCCTTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | CCAGAAGCTTTCCCCAGTGGAACCGGGTGGGCAGGAGTGTGCCATTaGCCAGCGTGGTCCTTGACTTTGTGGACACGCCCAGGTAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEAFPSGTGWAGVCH*PAWSLTLWTRPGRG Trigger: ACCTCTACCTGGGCGTGTCCACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGCTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | CCCAAGCTGTCCACGGTGTACTCAAAGTCGTCACACTCTGTGAGCTaGCTGCAGTGCTCCTCAGCCTCCCTGTCCAGCTCTGACTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PKLSTVYSKSSHSVS*LQCSSASLSSSDLR Trigger: GCGCAAGTCAGAGCTGGACAGGGAGGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACTTTGAGTACACCGTGGACAGCTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | CACAAAGTCCAGCCTTTCCTTCTTGGCCACGTGCTGCTGGATGCGTaGTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGACGCTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HKVQPFLLGHVLLDA*CLQQGRRHVRDAGL Trigger: AAGACCAGCGTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | GCCTCAAGGGTGATGGTCACTCTGCACTCCCCCAGAGGGAGAAGCTaGCCGCAGAAAGGCTCGATGTCGAAGGGGGACACATCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ASRVMVTLHSPRGRS*PQKGSMSKGDTSSS Trigger: AGATGAGGATGTGTCCCCCTTCGACATCGAGCCTTTCTGCGGCCAGCTTCTCCCTCTGGGGGAGTGCAGAGTGACCATCACCCTTGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | ATGCTCTCCACAAAGTCCAGCCTTTCCTTCTTGGCCACGTGCTGCTaGATGCGTGCTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: MLSTKSSLSFLATCC*MRAVFSRAGGTSGT Trigger: CGTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | GAAGCCCAGGGCATAGCCAGTATACCCCACCTTGTGCATGACCCCTaGGTCGAGCACCGTGGGCGTGAAGGAGATGTAGATGGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAQGIASIPHLVHDP*VEHRGREGDVDGPV Trigger: CACAGGACCATCTACATCTCCTTCACGCCCACGGTGCTCGACCCAGGGGTCATGCACAAGGTGGGGTATACTGGCTATGCCCTGGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS-3UTR CAA 90 bp | AGCCACTCTGCTGGTGGTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACTTCACTGGGGGCAGTTaGACAGGGGTCTCCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: SHSAGGGPENCHTGPGSHFTGGS*TGVSTT Trigger: GGTTGTGGAGACCCCTGTCAAACTGCCCCCAGTGAA...GTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCACCACCAGCAGAGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS TCA 90 bp | TGGAGCCCAAGCTGTCCACGGTGTACTCAAAGTCGTCACACTCTGTaGGCTGCCTGCAGTGCTCCTCAGCCTCCCTGTCCAGCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: WSPSCPRCTQSRHTL*AACSAPQPPCPALT Trigger: AGTCAGAGCTGGACAGGGAGGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACTTTGAGTACACCGTGGACAGCTTGGGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | TTCCTGTTCTCCATGCTGGCGAGCAGCCGCCTGTCCAGGGCTCTCTaGGGCACCTGCAGGTGTTCCATCCACTTCTTATTCTTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSMLASSRLSRAL*GTCRCSIHFLFFGL Trigger: CAGGCCAAAGAATAAGAAGTGGATGGAACACCTGCAGGTGCCGCAGAGAGCCCTGGACAGGCGGCTGCTCGCCAGCATGGAGAACAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | CCACTATGGAGATGGTCACCTGAAGTCCCAGGGGCTTCCCAGAGATaGCCAGGACCAGCGGCTTCTCCATGCCAGACACGTGACAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLWRWSPEVPGASQR*PGPAASPCQTRDKG Trigger: TCCTTTGTCACGTGTCTGGCATGGAGAAGCCGCTGGTCCTGGGCATCTCTGGGAAGCCCCTGGGACTTCAGGTGACCATCTCCATAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | AACATGCTCTCCACAAAGTCCAGCCTTTCCTTCTTGGCCACGTGCTaGTGGATGCGTGCTGTCTTCAGCAGGGCAGGAGGCACGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NMLSTKSSLSFLATC*WMRAVFSRAGGTSG Trigger: CCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | AGAGGAGCTCATCCCAGTACTCGCCCCACATGTTGGCACAGCCTGTaGTGTCAATACATAGCTCCTGGTAGGCTCCCAGCATGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGAHPSTRPTCWHSL*CQYIAPGRLPACPG Trigger: CCCAGGGCATGCTGGGAGCCTACCAGGAGCTATGTATTGACATCACAGGCTGTGCCAACATGTGGGGCGAGTACTGGGATGAGCTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | ACTGATGAGGGGCTCTGCTGTCCCAGCTGGCCCCACCTTGAGAAATaGAGAAGGGCCTGGAGACCCGGGCCTGGAAGTCATACAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TDEGLCCPSWPHLEK*RRAWRPGPGSHTGF Trigger: AAATCCTGTATGACTTCCAGGCCCGGGTCTCCAGGCCCTTCTTCATTTCTCAAGGTGGGGCCAGCTGGGACAGCAGAGCCCCTCATCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | AGTTCCAGGGACAGTGAGAAGGACACATCCACCAGCATGTTGTCCTaGGGACGGATCATCAGCCACTGGCCTGTGGAGGCCGTCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRDSEKDTSTSMLS*GRIISHWPVEAVPS Trigger: AGAAGGGACGGCCTCCACAGGCCAGTGGCTGATGATCCGTCCTCAGGACAACATGCTGGTGGATGTGTCCTTCTCACTGTCCCTGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | GTTCCTCTTGTCCCAACAGCACCGTCCAGTAGCTCAGGCAGCAGCTaGGGTTCATCAGGTAGATCTGCCGGGTGTGCTGCTGGTTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: VPLVPTAPSSSSGSS*GSSGRSAGCAAGSR Trigger: TCGTGAACCAGCAGCACACCCGGCAGATCTACCTGATGAACCTCAGCTGCTGCCTGAGCTACTGGACGGTGCTGTTGGGACAAGAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | ACATCCTCATCTCTCTCTGCCAGGCAGACTGGGCTCTCCTTCAAATaGCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSLSARQTGLSFK*HTADSWLTFRIWME Trigger: CTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | GGACTTCCTGATGGACCAGCTGAGACTGGCGGACTCGAGCTGGTGTaGGACAGACAAAAACTGGGTCTCCAAGGACGACATAACGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLPDGPAETGGLELV*DRQKLGLQGRHNGR Trigger: TCGGCCGTTATGTCGTCCTTGGAGACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCCGCCAGTCTCAGCTGGTCCATCAGGAAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | CGAAGTACGGAGAGGACGGTGGGAGGACACGCAAGAATCGGCTGGTaGAGGTGGTGTTCTGTAGAGCGATCACCATCTCGTAAACGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTERTVGGHARIGW*RWCSVERSPSRKRV Trigger: GACCCGTTTACGAGATGGTGATCGCTCTACAGAACACCACCTCCACCAGCCGATTCTTGCGTGTCCTCCCACCGTCCTCTCCGTACTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | GATGTCGAAGGGGGACACATCCTCATCTCTCTCTGCCAGGCAGACTaGGCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGACATT | + |
|
Preference number: 5 (lower is better) Translates to: DVEGGHILISLCQAD*ALLQMPHGGQLADI Trigger: AATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGATGTGTCCCCCTTCGACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | TTGGTCAGCTTTTCCTCTGTGTGGGTCGTCAACTCCAAGGTGAGTTaGAGCTCTTCACTGGGGCCCAGCAGGCCCTGTGTGGGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFSSVWVVNSKVS*SSSLGPSRPCVGET Trigger: AGTCTCTCCCACACAGGGCCTGCTGGGCCCCAGTGAAGAGCTCCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAAGCTGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | AGGGTGAATGGGGTCTGTATCGGGGAGCAGTTTGTCAGGATGATATaGCGAATCACGGGCGTCCTCAGTGGCACCTTCGAGCCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVNGVCIGEQFVRMI*RITGVLSGTFEPKS Trigger: GGACTTCGGCTCGAAGGTGCCACTGAGGACGCCCGTGATTCGCCATATCATCCTGACAAACTGCTCCCCGATACAGACCCCATTCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCCAGCCCCATAGCCCGTGTACCTGTTCGGCAGCCCTGCTCCTCAACCCAAAGGAGAACCAAATaGGTCAGCTTTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RASSPIARVPVRQPCSSTQRRTK*VSFSSV Trigger: CACAGAGGAAAAGCTGACCAATTTGGTTCTCCTTTG...GGTTGAGGAGCAGGGCTGCCGAACAGGTACACGGGCTATGGGGCTGGAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS TCA 90 bp | CCATGTGGTGTGTTAGGCGGGAAAAACCGAGGGTTTTTCAGGAAGTaGTTCCTGTTCTCCATGCTGGCGAGCAGCCGCCTGTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCGVLGGKNRGFFRK*FLFSMLASSRLSRA Trigger: AGCCCTGGACAGGCGGCTGCTCGCCAGCATGGAGAACAGGAATCACTTCCTGAAAAACCCTCGGTTTTTCCCGCCTAACACACCACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 90 bp | CACGGGGGCATCTGTACAGCTCCACTCAGGCTCTGCATTCAGGGATaGTCTTCTCTCTGGCTTGCTCAAAGGGACGATGAGAGACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGGICTAPLRLCIQG*SSLWLAQRDDERLA Trigger: GGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGCTGTACAGATGCCCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 90 bp | CCTGGGGCCAGCTCAAACACGGAAGGCATTACTCCAAAAGGAGGCTaGTCTACAAAGCCAGTAGTTGCAACAGCCCGGAAACTCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGASSNTEGITPKGG*STKPVVATARKLGG Trigger: GCCACCGAGTTTCCGGGCTGTTGCAACTACTGGCTTTGTAGAGCAGCCTCCTTTTGGAGTAATGCCTTCCGTGTTTGAGCTGGCCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 90 bp | GATAACATGCTCTCCACAAAGTCCAGCCTTTCCTTCTTGGCCACGTaGTGCTGGATGCGTGCTGTCTTCAGCAGGGCAGGAGGCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DNMLSTKSSLSFLAT*CWMRAVFSRAGGTS Trigger: TGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCATGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | ACCCTGGTAAGCTGGCCTCCGAGGTCTCAGGGCACACAATCTCACTaGCGTCTTGATCTCGCAGTGGGAAGGGTGGCCCATAAAACACAA | + |
|
Preference number: 5 (lower is better) Translates to: TLVSWPPRSQGTQSH*RLDLAVGRVAHKTQ Trigger: TTGTGTTTTATGGGCCACCCTTCCCACTGCGAGATCAAGACGGCAGTGAGATTGTGTGCCCTGAGACCTCGGAGGCCAGCTTACCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | CCGCGGGCCTTGATCAAACTGTCGCTCAAGTCATCTCCGATCACCTaGGCGGTGTACAAGTTTCGGAAGACTCGGGCAAGCAGATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRALIKLSLKSSPIT*AVYKFRKTRASRCE Trigger: CTCACATCTGCTTGCCCGAGTCTTCCGAAACTTGTACACCGCCCAGGTGATCGGAGATGACTTGAGCGACAGTTTGATCAAGGCCCGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGCGAAGCAGCTGTCCAGCTCTGACTaGCGCAGGAAACGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ADIPDLDGDGSLLSQAKQLSSSD*RRKRCS Trigger: TGAGCAGCGTTTCCTGCGCAAGTCAGAGCTGGACAG...CTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | AACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCCTCCAGCCTTTCCTTCTaGGCCACGTGCTGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NCHTGPGSHHTSEGDPSSSSLSF*ATCCWM Trigger: CATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGA...GGATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS GCA 90 bp | CATTTGATGCTGTCTGAGCTGTGTGTCTCTCCAGGCATCAGAGGCTaGAGGTTGGGTTTCATGATCTGCCAGTGGAAGGCCAGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: HLMLSELCVSPGIRG*RLGFMICQWKASST Trigger: CGTGGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGATGCCTGGAGAGACACACAGCTCAGACAGCATCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | ATGCCCTTCTCGGGGATGATGGAGAAGGCTGTCTCCCTGTCAGGGTaGCATTTGATGCTGTCTGAGCTGTGTGTCTCTCCAGGCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MPFSGMMEKAVSLSG*HLMLSELCVSPGIR Trigger: TCTGATGCCTGGAGAGACACACAGCTCAGACAGCATCAAATGCCACCCTGACAGGGAGACAGCCTTCTCCATCATCCCCGAGAAGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | TCCTGTGAGATAACATGCTCTCCACAAAGTCCAGCCTTTCCTTCTTaGCCACGTGCTGCTGGATGCGTGCTGTCTTCAGCAGGGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCEITCSPQSPAFPS*PRAAGCVLSSAGQE Trigger: CTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCATGTTATCTCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | TCCAGAGATCTGGGTCCCAAACCTGGTGATAGGCTCCTTCTGGAATaGGGCCACACTGTAGCACGTATTCCTCAGGGAGCTGATAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRDLGPKPGDRLLLE*GHTVARIPQGADRA Trigger: TGCCCTATCAGCTCCCTGAGGAATACGTGCTACAGTGTGGCCCCATTCCAGAAGGAGCCTATCACCAGGTTTGGGACCCAGATCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | GCGAAGCAGACCAAACTGAAGGGCTGGGACATCAATGGTCAAGGCAGGTCCCTTCGAGGAAGCTGTGCATaGCTGCTCTTCCTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTKLKGWDINGQGRSLRGSCA*LLFLAL Trigger: GAGAGCAAGGAAGAGCAGCAATGCACAGCTTCCTCG...AAGGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | GTAGAGGTTGCTGAACTCCAAGTGGCTGTTCTTCAGGTACACGTGAGGCTGCTGTTCACTGGGGGCAGTTaGACAGGGGTCTCCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: VEVAELQVAVLQVHVRLLFTGGS*TGVSTT Trigger: GGTTGTGGAGACCCCTGTCAAACTGCCCCCAGTGAA...CAGCAGCCTCACGTGTACCTGAAGAACAGCCACTTGGAGTTCAGCAACCTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTTCAAATGCCACACGGCGGACAGCTGGCTGACATTCCGGATCTGGATGGCCTGCTTGTCTTCTaGACAGAATCTGTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLQMPHGGQLADIPDLDGLLVF*TESVVL Trigger: GAGGACCACAGATTCTGTCAAGAAGACAAGCAGGCC...ATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGTGTGGCATTTGAAGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | GTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGCCCTGAACTAGACACTGAGACATaGGAGGGGCATGGAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: VDGLCSDCHSHSAGGGPELDTET*EGHGDP Trigger: AGGGTCTCCATGCCCCTCCAATGTCTCAGTGTCTAG...TTCAGGGCCACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS CCA 90 bp | TCATCAAAATCGCCAAGACAGTCCGGGATGAACTGGACGATGTACTaGCAGGTCATCCCGGGAGCCACTATTCCGCCTTTTCCTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSKSPRQSGMNWTMY*QVIPGATIPPFPGN Trigger: GTTCCCAGGAAAAGGCGGAATAGTGGCTCCCGGGATGACCTGCCAGTACATCGTCCAGTTCATCCCGGACTGTCTTGGCGATTTTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | CCAGTAGTTGCAACAGCCCGGAAACTCGGTGGCGGCCAGCTCTTTTaGGGCATGATACAGAATTTGCCGACGCTGAAGCCCACATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVVATARKLGGGQLF*GMIQNLPTLKPTFL Trigger: CAAAAATGTGGGCTTCAGCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCTGGCCGCCACCGAGTTTCCGGGCTGTTGCAACTACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATCCTTCATCTGTCCAGCTCTGACTaGCGCAGGAAACGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTVTQGLAHTTPQKEILHLSSSD*RRKRCS Trigger: TGAGCAGCGTTTCCTGCGCAAGTCAGAGCTGGACAG...ATGAAGGATCTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTCTGGAAGATGGCCATTCAGAGGGCGGGGCTGCACACATCTCGGTCACGCTCTTCTCTCTGGCTaGCTCAAAGGGACGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VYSGRWPFRGRGCTHLGHALLSG*LKGTMR Trigger: TCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGC...GTGACCGAGATGTGTGCAGCCCCGCCCTCTGAATGGCCATCTTCCAGAATAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCGGGACGCTGGTCTTCTaGTACAGGCTGTCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNVGELILVAVISSRVQLGTLVF*YRLSWE Trigger: CTCCCAGGACAGCCTGTACAAGAAGACCAGCGTCCC...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS TCA 90 bp | AAAGCCACCAGCTGCCCTGTCCCTACGACGACCACCTCCTTTATCTaGCAGTTGTCACACACGATGATGAAGGTCTCTTCTGCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KATSCPVPTTTTSFI*QLSHTMMKVSSACP Trigger: AGGACAGGCAGAAGAGACCTTCATCATCGTGTGTGACAACTGTCAGATAAAGGAGGTGGTCGTCGTAGGGACAGGGCAGCTGGTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | TGTACAGCTCCACTCAGGCTCTGCATTCAGGGATGCTCTTCTCTCTaGCTTGCTCAAAGGGACGATGAGAGACTTGCCTCCATGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTAPLRLCIQGCSSL*LAQRDDERLASMWC Trigger: ACACCACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGCTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | TTTTTGCAGATGAATTTGGTTATCTTCACCCCTCCAATGAGGCAGTaGCCGCAGTCCAACACTGGTGACAAGGTCAGCACTGGCGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLQMNLVIFTPPMRQ*PQSNTGDKVSTGGG Trigger: ACCGCCGCCAGTGCTGACCTTGTCACCAGTGTTGGACTGCGGCCACTGCCTCATTGGAGGGGTGAAGATAACCAAATTCATCTGCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS-3UTR CAA 90 bp | TCGATGATATGGCAGTGGCTGATCTTCCCCCACATGTATCTGATGGGTGACTTGTCACTGCCGCGGGCCTaGATCAAACTGTCGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMIWQWLIFPHMYLMGDLSLPRA*IKLSLK Trigger: CTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGA...CAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACTGCCATATCATCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CAA 90 bp | GTTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTTCACTGCCGCGGGCCTaGATCAAACTGTCGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGIVDGLCSDCHSHSAGGSLPRA*IKLSLK Trigger: CTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGA...ACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CAA 90 bp | ATTTCACACTCCAGGTCCTGGCTGGTTGGGCCAGGCACCCCACCCGTTAGGTTTTGTAGTCTGCTCTGTTaGGTGGTGTGTTCTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISHSRSWLVGPGTPPVRFCSLLC*VVCSVS Trigger: AGAAACAGAACACACCACCAAACAGAGCAGACTACA...AAACCTAACGGGTGGGGTGCCTGGCCCAACCAGCCAGGACCTGGAGTGTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS-3UTR CAA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGCCAGCTGGCCCCACCTaGAGAAATGAAGAAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LELWTVFVVTVIATLLVVPAGPT*RNEEGP Trigger: AGGCCCTTCTTCATTTCTCAAGGTGGGGCCAGCTGG...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS GCA 90 bp | TGTTTGGTGGTGTGTTCTGTTTCTGCAATATCCCGTGCACGGGCCTaGATGATATGTCTCTCCAACATGGCGGCTTCATCCAGACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLVVCSVSAISRARA*MICLSNMAASSRRC Trigger: ACAGCGTCTGGATGAAGCCGCCATGTTGGAGAGACATATCATGCAGGCCCGTGCACGGGATATTGCAGAAACAGAACACACCACCAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 90 bp | CAGTGGAAGGCCAGCTCCACGTGTGTAGCATTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGGACGTTTTCAGGCTCAAACCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QWKASSTCVAFLMMS*FFAVDWTFSGSNRI Trigger: TATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACACACGTGGAGCTGGCCTTCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | TTATACAGACGGAGAGATCTGGTGACTGTATCTCCTCCAGAGATCTaGGTCCCAAACCTGGTGATAGGCTCCTTCTGGAATGGGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LYRRRDLVTVSPPEI*VPNLVIGSFWNGAT Trigger: TGTGGCCCCATTCCAGAAGGAGCCTATCACCAGGTTTGGGACCCAGATCTCTGGAGGAGATACAGTCACCAGATCTCTCCGTCTGTATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | GCCTGGAAGTCATACAGGATTTCAGTGGTGTTGGTCAGTTTCAGATaGCGGGTGGTAATCCGGTCACTTAGCACCCCACTGCAGGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: AWKSYRISVVLVSFR*RVVIRSLSTPLQGF Trigger: AAATCCCTGCAGTGGGGTGCTAAGTGACCGGATTACCACCCGCCATCTGAAACTGACCAACACCACTGAAATCCTGTATGACTTCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 90 bp | TGGTGGTGTGTTCTGTTTCTGCAATATCCCGTGCACGGGCCTGCATaGTATGTCTCTCCAACATGGCGGCTTCATCCAGACGCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WWCVLFLQYPVHGPA*YVSPTWRLHPDAVY Trigger: ATAAACAGCGTCTGGATGAAGCCGCCATGTTGGAGAGACATATCATGCAGGCCCGTGCACGGGATATTGCAGAAACAGAACACACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 90 bp | GGCCAGCTCCACGTGTGTAGCATTTCTGATGATGAGCTGCTTCTTTaGGGTGGACTGGACGTTTTCAGGCTCAAACCGGATAAAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLHVCSISDDELLL*GGLDVFRLKPDKVL Trigger: CAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACACACGTGGAGCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 90 bp | ACCAAAATGAAATCATCAAAATCGCCAAGACAGTCCGGGATGAACTaGACGATGTACTGGCAGGTCATCCCGGGAGCCACTATTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TKMKSSKSPRQSGMN*TMYWQVIPGATIPP Trigger: AGGCGGAATAGTGGCTCCCGGGATGACCTGCCAGTACATCGTCCAGTTCATCCCGGACTGTCTTGGCGATTTTGATGATTTCATTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCTGGCTGACATTCCGGATCTGGATGGAGATGGAAGCCTTCTTTCCCAGGTGTTTTCGCATTAACTaGCTGTCTAGACACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSWLTFRIWMEMEAFFPRCFRIN*LSRHHL Trigger: CAGGTGGTGTCTAGACAGCAAGTTAATGCGAAAACA...CCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTGTGGACGGTCTTTGTAGTGACTGTCATAGCCACTCTGCTGGTGGTGGGCCTGCTTGTCTTCTaGACAGAATCTGTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LELWTVFVVTVIATLLVVGLLVF*TESVVL Trigger: GAGGACCACAGATTCTGTCAAGAAGACAAGCAGGCC...CACCACCAGCAGAGTGGCTATGACAGTCACTACAAAGACCGTCCACAATTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCCTGAAAACTGTCACACAGGGCCTGGCTCACACCACACCTCAGAAGGAGATGGGTGACTTGCTGTaGTTCCACATCTTAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VALKTVTQGLAHTTPQKEMGDLL*FHILKS Trigger: AGATTTTAAGATGTGGAACAACAGCAAGTCACCCAT...CTCCTTCTGAGGTGTGGTGTGAGCCAGGCCCTGTGTGACAGTTTTCAGGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS TCA 90 bp | CATCTCGTAAACGGGTCCAATTTCGTAATCTGTGAAAAATCCAACTaGTGGCTTCGCCAGGAACACGGGGGCATCTGTACAGCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: HLVNGSNFVICEKSN*WLRQEHGGICTAPL Trigger: GAGTGGAGCTGTACAGATGCCCCCGTGTTCCTGGCGAAGCCATCAGTTGGATTTTTCACAGATTACGAAATTGGACCCGTTTACGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 90 bp | TCTCTCTGGCTTGCTCAAAGGGACGATGAGAGACTTGCCTCCATGTaGTGTGTTAGGCGGGAAAAACCGAGGGTTTTTCAGGAAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLWLAQRDDERLASM*CVRREKPRVFQEVI Trigger: AATCACTTCCTGAAAAACCCTCGGTTTTTCCCGCCTAACACACCACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS-3UTR CAA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAACTGTCAGGGTGGCATTaGATGCTGTCTGAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AMLDHRTTFISVGRCLHELSGWH*MLSELC Trigger: ACACAGCTCAGACAGCATCAAATGCCACCCTGACAG...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGCTCTTCTCTCTGGCTaGCTCAAAGGGACGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDALLSG*LKGTMR Trigger: TCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGC...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS-3UTR CAA 90 bp | GCGAAGCAGACCAAACTGAAGGGCTGGGACATCAATGGTCAAGGCAGGTCCCTTTTTTTGCAGATGAATTaGGTTATCTTCACCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKQTKLKGWDINGQGRSLFLQMN*VIFTPP Trigger: TGGAGGGGTGAAGATAACCAAATTCATCTGCAAAAA...AAGGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTGGTCTGCTTCGC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS GCA 90 bp | CAGTACACTGTGGAAACACTTGAGGTAGCATTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGGACGTTTTCAGGCTCAAACCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QYTVETLEVAFLMMS*FFAVDWTFSGSNRI Trigger: TATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACCTCAAGTGTTTCCACAGTGTACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS CCA 90 bp | CTTGAGGTAGCATTTCTGATGATGAGCTGCTTCTTTGCGGTGGACTaGACGTTTTCAGGCTCAAACCGGATAAAGTACTGGGCTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LEVAFLMMSCFFAVD*TFSGSNRIKYWAVK Trigger: TTTAACAGCCCAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
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| CDS CCA 90 bp | ACGTGTGTAGCATTTCTGATGATGAGCTGCTTCTTTGCGGTGGACTaGACGTTTTCAGGCTCAAACCGGATAAAGTACTGGGCTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCVAFLMMSCFFAVD*TFSGSNRIKYWAVK Trigger: TTTAACAGCCCAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACACACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS-3UTR CAA 90 bp | CAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACTGTTTTCGCATTAACTaGCTGTCTAGACACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRQCMLCLTTGQHSFLWDCFRIN*LSRHHL Trigger: CAGGTGGTGTCTAGACAGCAAGTTAATGCGAAAACA...GTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CAA 90 bp | GTAAACGTGGGTGAACTGATCTTGGTTGCAGTCATTTCATCCAGGGTCCAGCTCTTTTTGCAGATGAATTaGGTTATCTTCACCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VNVGELILVAVISSRVQLFLQMN*VIFTPP Trigger: TGGAGGGGTGAAGATAACCAAATTCATCTGCAAAAA...GAGCTGGACCCTGGATGAAATGACTGCAACCAAGATCAGTTCACCCACGTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS-3UTR CAA 90 bp | GCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTGCCTTCATGAATATCTGATGGGTGACTaGCTGTTGTTCCACATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AMLDHRTTFISVGRCLHEYLMGD*LLFHIL Trigger: TAAGATGTGGAACAACAGCAAGTCACCCATCAGATA...TTCATGAAGGCACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS CCA 72 bp | CGCAGCGTCTGCGGCTCCGGGAGTGGAGGGAGCGCGTaGAACCCGGCGCGGAGGGACCGCGTAGGGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVCGSGSGGSA*NPARRDRVGKP Trigger: CGGCTTCCCTACGCGGTCCCTCCGCGCCGGGTTCCACGCGCTCCCTCCACTCCCGGAGCCGCAGACGCTGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | TGCATTGGTGGCTCGGGCCTCCAGCAGTCCACTGCCTaGGGAGACCCCAAACGCATGATCCTCCCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CIGGSGLQQSTA*GDPKRMILPGW Trigger: CCAGCCAGGGAGGATCATGCGTTTGGGGTCTCCCCAGGCAGTGGACTGCTGGAGGCCCGAGCCACCAATGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GCTCGCGCCTGCTGCAGCTGGTCAAGGAACTCTTCGTaGCGCGCATCCTCACTGCCGCGGGCCTTGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ARACCSWSRNSS*RASSLPRALIK Trigger: TTTGATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGTTCCTTGACCAGCTGCAGCAGGCGCGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | GGGCTCTGCTGTCCCAGCTGGCCCCACCTTGAGAAATaGAGAAGGGCCTGGAGACCCGGGCCTGGAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLCCPSWPHLEK*RRAWRPGPGSH Trigger: ATGACTTCCAGGCCCGGGTCTCCAGGCCCTTCTTCATTTCTCAAGGTGGGGCCAGCTGGGACAGCAGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | CAGCCTTTCCTTCTTGGCCACGTGCTGCTGGATGCGTaGTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QPFLLGHVLLDA*CLQQGRRHVRD Trigger: GTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | CGGTATATGTGGCCGGCGGGCACTGCCTCGTGCCTCTaGAGGATGACAGACATGATCTGCTCTTCGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RYMWPAGTASCL*RMTDMICSSAL Trigger: CAGGGCCGAAGAGCAGATCATGTCTGTCATCCTGCAGAGGCACGAGGCAGTGCCCGCCGGCCACATATACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 72 bp | AGCAGGGCAGGAGGCACGTCAGGGACGCTGGTCTTCTaGTACAGGCTGTCCTGGGAGCTCCCGAAGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRAGGTSGTLVF*YRLSWELPKYS Trigger: GGAGTACTTCGGGAGCTCCCAGGACAGCCTGTACAAGAAGACCAGCGTCCCTGACGTGCCTCCTGCCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | GCTGTCTTCAGCAGGGCAGGAGGCACGTCAGGGACGCTGGTCTTCTaGTACAGGCTGTCCTGGGAGCTCCCGAAGTACTCCAGTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVFSRAGGTSGTLVF*YRLSWELPKYSSVR Trigger: CCTCACACTGGAGTACTTCGGGAGCTCCCAGGACAGCCTGTACAAGAAGACCAGCGTCCCTGACGTGCCTCCTGCCCTGCTGAAGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 90 bp | CTGCAGCTGCCCGTTGAGGGGACAGTGTGGCTAGACACTGAGACATaGGAGGGGCATGGAGACCCTGGTAAGCTGGCCTCCGAGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLPVEGTVWLDTET*EGHGDPGKLASEVS Trigger: TGAGACCTCGGAGGCCAGCTTACCAGGGTCTCCATGCCCCTCCAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAACGGGCAGCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS CAA 90 bp | GCCTGGGGAGACCCCAAACGCATGATCCTCCCTGGCTGGTTCCTCTaGTCCCAACAGCACCGTCCAGTAGCTCAGGCAGCAGCTGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AWGDPKRMILPGWFL*SQQHRPVAQAAAEV Trigger: AACCTCAGCTGCTGCCTGAGCTACTGGACGGTGCTGTTGGGACAAGAGGAACCAGCCAGGGAGGATCATGCGTTTGGGGTCTCCCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | GGTCCGAGTGGGACTCGAGGATGCCCTTCTCGGGGATaGTGGAGAAGGCTGTCTCCCTGTCAGGGTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GPSGTRGCPSRG*WRRLSPCQGGI Trigger: AATGCCACCCTGACAGGGAGACAGCCTTCTCCATCATCCCCGAGAAGGGCATCCTCGAGTCCCACTCGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | GCGAGCAGCCGCCTGTCCAGGGCTCTCTGCGGCACCTaGAGGTGTTCCATCCACTTCTTATTCTTTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSRLSRALCGT*RCSIHFLFFGL Trigger: CAGGCCAAAGAATAAGAAGTGGATGGAACACCTGCAGGTGCCGCAGAGAGCCCTGGACAGGCGGCTGCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | AGCTGGCCTCCGAGGTCTCAGGGCACACAATCTCACTaGCGTCTTGATCTCGCAGTGGGAAGGGTGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SWPPRSQGTQSH*RLDLAVGRVAH Trigger: ATGGGCCACCCTTCCCACTGCGAGATCAAGACGGCAGTGAGATTGTGTGCCCTGAGACCTCGGAGGCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CATCCCAAGTCCCAGAGCGAAGTACGGAGAGGACGGTaGGAGGACACGCAAGAATCGGCTGGTGGAGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPKSQSEVRRGR*EDTQESAGGGG Trigger: ACCACCTCCACCAGCCGATTCTTGCGTGTCCTCCCACCGTCCTCTCCGTACTTCGCTCTGGGACTTGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GTGATGGTCACTCTGCACTCCCCCAGAGGGAGAAGCTaGCCGCAGAAAGGCTCGATGTCGAAGGGGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: VMVTLHSPRGRS*PQKGSMSKGDT Trigger: TGTGTCCCCCTTCGACATCGAGCCTTTCTGCGGCCAGCTTCTCCCTCTGGGGGAGTGCAGAGTGACCATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | CCCGTTGAGGGGACAGTGTGGCTAGACACTGAGACATaGGAGGGGCATGGAGACCCTGGTAAGCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVEGTVWLDTET*EGHGDPGKLAS Trigger: GGAGGCCAGCTTACCAGGGTCTCCATGCCCCTCCAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
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| CDS CAA 90 bp | TGGTCAAGGAACTCTTCGTGGCGCGCATCCTCACTGCCGCGGGCCTaGATCAAACTGTCGCTCAAGTCATCTCCGATCACCTGGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WSRNSSWRASSLPRA*IKLSLKSSPITWAV Trigger: CACCGCCCAGGTGATCGGAGATGACTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGTTCCTTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | CCACTGCTCACCGTTGAGGGGACAGTGTGGCTAGACACTGAGACATaGGAGGGGCATGGAGACCCTGGTAAGCTGGCCTCCGAGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLLTVEGTVWLDTET*EGHGDPGKLASEVS Trigger: TGAGACCTCGGAGGCCAGCTTACCAGGGTCTCCATGCCCCTCCAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAACGGTGAGCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165231.8 |
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| CDS TCA 72 bp | GTCCCAACAGCACCGTCCAGTAGCTCAGGCAGCAGCTaGGGTTCATCAGGTAGATCTGCCGGGTGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPTAPSSSSGSS*GSSGRSAGCAA Trigger: AGCAGCACACCCGGCAGATCTACCTGATGAACCTCAGCTGCTGCCTGAGCTACTGGACGGTGCTGTTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | ACCGAGGGTTTTTCAGGAAGTGATTCCTGTTCTCCATaGTGGCGAGCAGCCGCCTGTCCAGGGCTCTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TEGFSGSDSCSP*WRAAACPGLSA Trigger: CGCAGAGAGCCCTGGACAGGCGGCTGCTCGCCAGCATGGAGAACAGGAATCACTTCCTGAAAAACCCTCGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GCAACAGCCCGGAAACTCGGTGGCGGCCAGCTCTTTTaGGGCATGATACAGAATTTGCCGACGCTGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATARKLGGGQLF*GMIQNLPTLKP Trigger: GGGCTTCAGCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCTGGCCGCCACCGAGTTTCCGGGCTGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | CTGAGACATTGGAGGGGCATGGAGACCCTGGTAAGCTaGCCTCCGAGGTCTCAGGGCACACAATCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRHWRGMETLVS*PPRSQGTQSHC Trigger: GCAGTGAGATTGTGTGCCCTGAGACCTCGGAGGCCAGCTTACCAGGGTCTCCATGCCCCTCCAATGTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | TGTTGTCCTGAGGACGGATCATCAGCCACTGGCCTGTaGAGGCCGTCCCTTCTTCACACTGATGAGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCPEDGSSATGL*RPSLLHTDEGL Trigger: GAGCCCCTCATCAGTGTGAAGAAGGGACGGCCTCCACAGGCCAGTGGCTGATGATCCGTCCTCAGGACAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 72 bp | ACCGTTGAGGGGACAGTGTGGCTAGACACTGAGACATaGGAGGGGCATGGAGACCCTGGTAAGCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVEGTVWLDTET*EGHGDPGKLAS Trigger: GGAGGCCAGCTTACCAGGGTCTCCATGCCCCTCCAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165231.8 |
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| CDS CAA 90 bp | ATTGGTCAGCTTTTCCTCTGTGTGGGTCGTCAACTCCAAGGTGAGTaGGAGCTCTTCACTGGGGCCCAGCAGGCCCTGTGTGGGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IGQLFLCVGRQLQGE*ELFTGAQQALCGRD Trigger: GTCTCTCCCACACAGGGCCTGCTGGGCCCCAGTGAAGAGCTCCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAAGCTGACCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | TTCTTCACACTGATGAGGGGCTCTGCTGTCCCAGCTGGCCCCACCTaGAGAAATGAAGAAGGGCCTGGAGACCCGGGCCTGGAAGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: FFTLMRGSAVPAGPT*RNEEGPGDPGLEVI Trigger: TATGACTTCCAGGCCCGGGTCTCCAGGCCCTTCTTCATTTCTCAAGGTGGGGCCAGCTGGGACAGCAGAGCCCCTCATCAGTGTGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | ACTCTTCGTGGCGCGCATCCTCACTGCCGCGGGCCTTaGTCAAACTGTCGCTCAAGTCATCTCCGATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TLRGAHPHCRGP*SNCRSSHLRSP Trigger: AGGTGATCGGAGATGACTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | AGCTGTCCACGGTGTACTCAAAGTCGTCACACTCTGTaGGCTGCCTGCAGTGCTCCTCAGCCTCCCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCPRCTQSRHTL*AACSAPQPPCP Trigger: TGGACAGGGAGGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACTTTGAGTACACCGTGGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | GGCTGTCTCCCTGTCAGGGTGGCATTTGATGCTGTCTaGGCTGTGTGTCTCTCCAGGCATCAGAGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCLPVRVAFDAV*AVCLSRHQRLQ Trigger: CTGCAGCCTCTGATGCCTGGAGAGACACACAGCTCAGACAGCATCAAATGCCACCCTGACAGGGAGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | TCCACGGTGTACTCAAAGTCGTCACACTCTGTGAGCTaGCTGCAGTGCTCCTCAGCCTCCCTGTCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STVYSKSSHSVS*LQCSSASLSSS Trigger: AGAGCTGGACAGGGAGGCTGAGGAGCACTGCAGGCAGCTCACAGAGTGTGACGACTTTGAGTACACCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | CTGGCGGACTCGAGCTGGTGTGGGACAGACAAAAACTaGGTCTCCAAGGACGACATAACGGCCGAGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LADSSWCGTDKN*VSKDDITAEEA Trigger: AGCTTCCTCGGCCGTTATGTCGTCCTTGGAGACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCCGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GAGAGGACGGTGGGAGGACACGCAAGAATCGGCTGGTaGAGGTGGTGTTCTGTAGAGCGATCACCATCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ERTVGGHARIGW*RWCSVERSPSR Trigger: ACGAGATGGTGATCGCTCTACAGAACACCACCTCCACCAGCCGATTCTTGCGTGTCCTCCCACCGTCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GCAGGTCATCCCGGGAGCCACTATTCCGCCTTTTCCTaGGAACATCCCAAGTCCCAGAGCGAAGTACGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGHPGSHYSAFS*EHPKSQSEVRR Trigger: TCTCCGTACTTCGCTCTGGGACTTGGGATGTTCCCAGGAAAAGGCGGAATAGTGGCTCCCGGGATGACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GGCGGTCTCCGGGCCTGCAGGGGGATTACCAGCGTGTaGGGAGACTGTGTCTCCACCAAAATGAAATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLRACRGITSV*GDCVSTKMKSS Trigger: TGATGATTTCATTTTGGTGGAGACACAGTCTCCCCACACGCTGGTAATCCCCCTGCAGGCCCGGAGACCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | TTTTCCTCTGTGTGGGTCGTCAACTCCAAGGTGAGTTaGAGCTCTTCACTGGGGCCCAGCAGGCCCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSVWVVNSKVS*SSSLGPSRPCV Trigger: CACACAGGGCCTGCTGGGCCCCAGTGAAGAGCTCCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GGGGTCTGTATCGGGGAGCAGTTTGTCAGGATGATATaGCGAATCACGGGCGTCCTCAGTGGCACCTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVCIGEQFVRMI*RITGVLSGTFE Trigger: CTCGAAGGTGCCACTGAGGACGCCCGTGATTCGCCATATCATCCTGACAAACTGCTCCCCGATACAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | GGCATAGCCAGTATACCCCACCTTGTGCATGACCCCTaGGTCGAGCACCGTGGGCGTGAAGGAGATGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GIASIPHLVHDP*VEHRGREGDVD Trigger: ATCTACATCTCCTTCACGCCCACGGTGCTCGACCCAGGGGTCATGCACAAGGTGGGGTATACTGGCTATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | AACTCTTCGTGGCGCGCATCCTCACTGCCGCGGGCCTaGATCAAACTGTCGCTCAAGTCATCTCCGATCACC | + |
|
Preference number: 6 (lower is better) Translates to: NSSWRASSLPRA*IKLSLKSSPIT Trigger: GGTGATCGGAGATGACTTGAGCGACAGTTTGATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | CTTTTCCTCTGTGTGGGTCGTCAACTCCAAGGTGAGTaGGAGCTCTTCACTGGGGCCCAGCAGGCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LFLCVGRQLQGE*ELFTGAQQALC Trigger: ACACAGGGCCTGCTGGGCCCCAGTGAAGAGCTCCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 90 bp | GGGGGCAGTTTGACAGGGGTCTCCACAACCTGTAGTCTGCTCTGTTaGGTGGTGTGTTCTGTTTCTGCAATATCCCGTGCACGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSLTGVSTTCSLLC*VVCSVSAISRARAC Trigger: GCAGGCCCGTGCACGGGATATTGCAGAAACAGAACACACCACCAAACAGAGCAGACTACAGGTTGTGGAGACCCCTGTCAAACTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | GGCCTGGAGACCCGGGCCTGGAAGTCATACAGGATTTCAGTGGTGTaGGTCAGTTTCAGATGGCGGGTGGTAATCCGGTCACTTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLETRAWKSYRISVV*VSFRWRVVIRSLST Trigger: GGTGCTAAGTGACCGGATTACCACCCGCCATCTGAAACTGACCAACACCACTGAAATCCTGTATGACTTCCAGGCCCGGGTCTCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | TTCAGATCCAGTCTCAGGGGGCTCACGGCAAAGTCCTaGAGGCGTCGCATTCGGCCTGGAATCTGTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FRSSLRGLTAKS*RRRIRPGICLS Trigger: AGACAGACAGATTCCAGGCCGAATGCGACGCCTTCAGGACTTTGCCGTGAGCCCCCTGAGACTGGATCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | CTGTCTGAGCTGTGTGTCTCTCCAGGCATCAGAGGCTaGAGGTTGGGTTTCATGATCTGCCAGTGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSELCVSPGIRG*RLGFMICQWKA Trigger: GGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGATGCCTGGAGAGACACACAGCTCAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | GATGGACCAGCTGAGACTGGCGGACTCGAGCTGGTGTaGGACAGACAAAAACTGGGTCTCCAAGGACGACAT | + |
|
Preference number: 6 (lower is better) Translates to: DGPAETGGLELV*DRQKLGLQGRH Trigger: ATGTCGTCCTTGGAGACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCCGCCAGTCTCAGCTGGTCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | TTCCTGATGGACCAGCTGAGACTGGCGGACTCGAGCTaGTGTGGGACAGACAAAAACTGGGTCTCCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FLMDQLRLADSS*CGTDKNWVSKD Trigger: GTCCTTGGAGACCCAGTTTTTGTCTGTCCCACACCAGCTCGAGTCCGCCAGTCTCAGCTGGTCCATCAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | TGCTGGTGGTGCTTCCGTCAGATTCCACTATGGAGATaGTCACCTGAAGTCCCAGGGGCTTCCCAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: CWWCFRQIPLWR*SPEVPGASQRC Trigger: GCATCTCTGGGAAGCCCCTGGGACTTCAGGTGACCATCTCCATAGTGGAATCTGACGGAAGCACCACCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140326.8 |
||
| CDS CCA 72 bp | TGGTGGTGCTGCTTCCGTCAGATTCCACTATGGAGATaGTCACCTGAAGTCCCAGGGGCTTCCCAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: WWCCFRQIPLWR*SPEVPGASQRC Trigger: GCATCTCTGGGAAGCCCCTGGGACTTCAGGTGACCATCTCCATAGTGGAATCTGACGGAAGCAGCACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | CTCCGAGGTCTCAGGGCACACAATCTCACTGCCGTCTaGATCTCGCAGTGGGAAGGGTGGCCCATAAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LRGLRAHNLTAV*ISQWEGWPIKH Trigger: GTGTTTTATGGGCCACCCTTCCCACTGCGAGATCAAGACGGCAGTGAGATTGTGTGCCCTGAGACCTCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | ATGCTGTCTGAGCTGTGTGTCTCTCCAGGCATCAGAGGCTGCAGGTaGGGTTTCATGATCTGCCAGTGGAAGGCCAGCTCCACGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: MLSELCVSPGIRGCR*GFMICQWKASSTCV Trigger: TACACACGTGGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGATGCCTGGAGAGACACACAGCTCAGACAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | GTGTTAGGCGGGAAAAACCGAGGGTTTTTCAGGAAGTaGTTCCTGTTCTCCATGCTGGCGAGCAGCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLGGKNRGFFRK*FLFSMLASSRL Trigger: CAGGCGGCTGCTCGCCAGCATGGAGAACAGGAATCACTTCCTGAAAAACCCTCGGTTTTTCCCGCCTAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | CATCCCAGTACTCGCCCCACATGTTGGCACAGCCTGTaGTGTCAATACATAGCTCCTGGTAGGCTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPSTRPTCWHSL*CQYIAPGRLPA Trigger: TGCTGGGAGCCTACCAGGAGCTATGTATTGACATCACAGGCTGTGCCAACATGTGGGGCGAGTACTGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | GTGAACACCATCTTTCTCTCTCCGTTCTCGCTCTCCTaGATATCCACTCCGGGCAACATCTGGTCGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VNTIFLSPFSLS*ISTPGNIWSAE Trigger: CTCGGCCGACCAGATGTTGCCCGGAGTGGATATTCAGGAGAGCGAGAACGGAGAGAGAAAGATGGTGTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | GCCTCCCTGTCCAGCTCTGACTTGCGCAGGAAACGCTaGTCACAGCTAAACGTCAGCTTTGAACATCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLSSSDLRRKR*SQLNVSFEHPR Trigger: CCTTGGATGTTCAAAGCTGACGTTTAGCTGTGAGCAGCGTTTCCTGCGCAAGTCAGAGCTGGACAGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | TACTCCAAAAGGAGGCTGCTCTACAAAGCCAGTAGTTaGAACAGCCCGGAAACTCGGTGGCGGCCAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YSKRRLLYKASS*NSPETRWRPAL Trigger: AAGAGCTGGCCGCCACCGAGTTTCCGGGCTGTTGCAACTACTGGCTTTGTAGAGCAGCCTCCTTTTGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | CCAGGCATCAGAGGCTGCAGGTTGGGTTTCATGATCTaGCAGTGGAAGGCCAGCTCCACGTGTGTAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PGIRGCRLGFMI*QWKASSTCVAF Trigger: AAATGCTACACACGTGGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGATGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | GCCCTGTGTGGGAGAGACTGTCATTGTGCACAAATCTaGTTGAGGTCCCAGAAGCTTTCCCCAGTGGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: ALCGRDCHCAQI*LRSQKLSPVEP Trigger: CGGTTCCACTGGGGAAAGCTTCTGGGACCTCAAGCAGATTTGTGCACAATGACAGTCTCTCCCACACAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CCAACATGGCGGCTTCATCCAGACGCTGTTTATAGATaGCTCGCGCCTGCTGCAGCTGGTCAAGGAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTWRLHPDAVYR*LAPAAAGQGTL Trigger: AAGAGTTCCTTGACCAGCTGCAGCAGGCGCGAGCCATCTATAAACAGCGTCTGGATGAAGCCGCCATGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CCACTCAGGCTCTGCATTCAGGGATGCTCTTCTCTCTaGCTTGCTCAAAGGGACGATGAGAGACTTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLRLCIQGCSSL*LAQRDDERLAS Trigger: GGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | TCGGGGATGATGGAGAAGGCTGTCTCCCTGTCAGGGTaGCATTTGATGCTGTCTGAGCTGTGTGTCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGMMEKAVSLSG*HLMLSELCVSP Trigger: TGGAGAGACACACAGCTCAGACAGCATCAAATGCCACCCTGACAGGGAGACAGCCTTCTCCATCATCCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | AGGGCACACAATCTCACTGCCGTCTTGATCTCGCAGTaGGAAGGGTGGCCCATAAAACACAAGCAGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAHNLTAVLISQ*EGWPIKHKQLQ Trigger: CTGGAGCTGCTTGTGTTTTATGGGCCACCCTTCCCACTGCGAGATCAAGACGGCAGTGAGATTGTGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | AGACACCACCTGAAGGCTGTCTTCACTGGGGGCAGTTaGACAGGGGTCTCCACAACCTGTAGTCTGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHHLKAVFTGGS*TGVSTTCSLLC Trigger: ACAGAGCAGACTACAGGTTGTGGAGACCCCTGTCAAACTGCCCCCAGTGAAGACAGCCTTCAGGTGGTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 90 bp | GCCAGTAGTTGCAACAGCCCGGAAACTCGGTGGCGGCCAGCTCTTTaGGGGCATGATACAGAATTTGCCGACGCTGAAGCCCACATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSCNSPETRWRPAL*GHDTEFADAEAHIF Trigger: AAAAATGTGGGCTTCAGCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCTGGCCGCCACCGAGTTTCCGGGCTGTTGCAACTACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | TGTGTGGGAGAGACTGTCATTGTGCACAAATCTGCTTaGGGTCCCAGAAGCTTTCCCCAGTGGAACCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CVGETVIVHKSA*GPRSFPQWNRV Trigger: CACCCGGTTCCACTGGGGAAAGCTTCTGGGACCTCAAGCAGATTTGTGCACAATGACAGTCTCTCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CAGGGGTCTCCACAACCTGTAGTCTGCTCTGTTTGGTaGTGTGTTCTGTTTCTGCAATATCCCGTGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSPQPVVCSVW*CVLFLQYPVHG Trigger: CCCGTGCACGGGATATTGCAGAAACAGAACACACCACCAAACAGAGCAGACTACAGGTTGTGGAGACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | AGGGAGGAACAAGACCTCCAACAGTATGGCGTACCCTaGGGCCAGCTCAAACACGGAAGGCATTACTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: REEQDLQQYGVP*GQLKHGRHYSK Trigger: TTTGGAGTAATGCCTTCCGTGTTTGAGCTGGCCCCAGGGTACGCCATACTGTTGGAGGTCTTGTTCCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | GCTCACGGCAAAGTCCTGAAGGCGTCGCATTCGGCCTaGAATCTGTCTGTCTGTCTCCTTATCCAAGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AHGKVLKASHSA*NLSVCLLIQAH Trigger: ATGAGCTTGGATAAGGAGACAGACAGACAGATTCCAGGCCGAATGCGACGCCTTCAGGACTTTGCCGTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 72 bp | GATAACATGCTCTCCACAAAGTCCAGCCTTTCCTTCTaGGCCACGTGCTGCTGGATGCGTGCTGTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DNMLSTKSSLSF*ATCCWMRAVFS Trigger: GCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCATGTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 90 bp | CAGCTCCACTCAGGCTCTGCATTCAGGGATGCTCTTCTCTCTGGCTaGCTCAAAGGGACGATGAGAGACTTGCCTCCATGTGGTGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: QLHSGSAFRDALLSG*LKGTMRDLPPCGVL Trigger: TAACACACCACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | GTTCTGTTTCTGCAATATCCCGTGCACGGGCCTGCATaGTATGTCTCTCCAACATGGCGGCTTCATCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLFLQYPVHGPA*YVSPTWRLHPD Trigger: GTCTGGATGAAGCCGCCATGTTGGAGAGACATATCATGCAGGCCCGTGCACGGGATATTGCAGAAACAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | GTGTGTTCTGTTTCTGCAATATCCCGTGCACGGGCCTaGATGATATGTCTCTCCAACATGGCGGCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VCSVSAISRARA*MICLSNMAASS Trigger: GGATGAAGCCGCCATGTTGGAGAGACATATCATGCAGGCCCGTGCACGGGATATTGCAGAAACAGAACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | ATCTGTACAGCTCCACTCAGGCTCTGCATTCAGGGATaGTCTTCTCTCTGGCTTGCTCAAAGGGACGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: ICTAPLRLCIQG*SSLWLAQRDDE Trigger: CTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGAGTGGAGCTGTACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS GCA 72 bp | GCCAGCTCCACGTGTGTAGCATTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGGACGTTTTCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSTCVAFLMMS*FFAVDWTFSGS Trigger: TGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACACACGTGGAGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | AAATCATCAAAATCGCCAAGACAGTCCGGGATGAACTaGACGATGTACTGGCAGGTCATCCCGGGAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KSSKSPRQSGMN*TMYWQVIPGAT Trigger: AGTGGCTCCCGGGATGACCTGCCAGTACATCGTCCAGTTCATCCCGGACTGTCTTGGCGATTTTGATGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | ATCAGAGGCTGCAGGTTGGGTTTCATGATCTGCCAGTaGAAGGCCAGCTCCACGTGTGTAGCATTTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: IRGCRLGFMICQ*KASSTCVAFLM Trigger: CATCAGAAATGCTACACACGTGGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CCA 72 bp | ATAACATGCTCTCCACAAAGTCCAGCCTTTCCTTCTTaGCCACGTGCTGCTGGATGCGTGCTGTCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ITCSPQSPAFPS*PRAAGCVLSSA Trigger: TGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGAGAGCATGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CGGAGAGATCTGGTGACTGTATCTCCTCCAGAGATCTaGGTCCCAAACCTGGTGATAGGCTCCTTCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RRDLVTVSPPEI*VPNLVIGSFWN Trigger: ATTCCAGAAGGAGCCTATCACCAGGTTTGGGACCCAGATCTCTGGAGGAGATACAGTCACCAGATCTCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CGTGAAGGAGATGTAGATGGTCCTGTGGTCTCCAGCTaGGATGACCAACTGCTTGGGGCTGATACGGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: REGDVDGPVVSS*DDQLLGADTVY Trigger: ATATACCGTATCAGCCCCAAGCAGTTGGTCATCCCAGCTGGAGACCACAGGACCATCTACATCTCCTTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | TCAGGCTCTGCATTCAGGGATGCTCTTCTCTCTGGCTaGCTCAAAGGGACGATGAGAGACTTGCCTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SGSAFRDALLSG*LKGTMRDLPPC Trigger: ACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGAGCATCCCTGAATGCAGAGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | AGCTGCCCTGTCCCTACGACGACCACCTCCTTTATCTaGCAGTTGTCACACACGATGATGAAGGTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCPVPTTTTSFI*QLSHTMMKVSS Trigger: AGAAGAGACCTTCATCATCGTGTGTGACAACTGTCAGATAAAGGAGGTGGTCGTCGTAGGGACAGGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS TCA 72 bp | CACAGTGACTGGAGTTATACAGACGGAGAGATCTGGTaGCTGTATCTCCTCCAGAGATCTGGGTCCCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: HSDWSYTDGEIW*LYLLQRSGSQT Trigger: GGTTTGGGACCCAGATCTCTGGAGGAGATACAGTCACCAGATCTCTCCGTCTGTATAACTCCAGTCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | ATGAATTTGGTTATCTTCACCCCTCCAATGAGGCAGTaGCCGCAGTCCAACACTGGTGACAAGGTCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: MNLVIFTPPMRQ*PQSNTGDKVST Trigger: AGTGCTGACCTTGTCACCAGTGTTGGACTGCGGCCACTGCCTCATTGGAGGGGTGAAGATAACCAAATTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | TCATACAGGATTTCAGTGGTGTTGGTCAGTTTCAGATaGCGGGTGGTAATCCGGTCACTTAGCACCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SYRISVVLVSFR*RVVIRSLSTPL Trigger: CAGTGGGGTGCTAAGTGACCGGATTACCACCCGCCATCTGAAACTGACCAACACCACTGAAATCCTGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | CAGCTAAACGTCAGCTTTGAACATCCAAGGGTGGATTaGTCTTTGGGTGCTGGGCAAAACGGCACGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: QLNVSFEHPRVD*SLGAGQNGTGS Trigger: TGATCCCGTGCCGTTTTGCCCAGCACCCAAAGACAAATCCACCCTTGGATGTTCAAAGCTGACGTTTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 72 bp | TTGCCGACGCTGAAGCCCACATTTTTGCAGATGAATTaGGTTATCTTCACCCCTCCAATGAGGCAGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPTLKPTFLQMN*VIFTPPMRQWP Trigger: CGGCCACTGCCTCATTGGAGGGGTGAAGATAACCAAATTCATCTGCAAAAATGTGGGCTTCAGCGTCGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | AGCTCAAACACGGAAGGCATTACTCCAAAAGGAGGCTaGTCTACAAAGCCAGTAGTTGCAACAGCCCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSNTEGITPKGG*STKPVVATARK Trigger: TTTCCGGGCTGTTGCAACTACTGGCTTTGTAGAGCAGCCTCCTTTTGGAGTAATGCCTTCCGTGTTTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | CACGTGTGTAGCATTTCTGATGATGAGCTGCTTCTTTaGGGTGGACTGGACGTTTTCAGGCTCAAACCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HVCSISDDELLL*GGLDVFRLKPD Trigger: ATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACACACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CGGCACCTGCAGGTGTTCCATCCACTTCTTATTCTTTaGCCTGCTTGTCTTCTTGACAGAATCTGTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RHLQVFHPLLIL*PACLLDRICGP Trigger: AGGACCACAGATTCTGTCAAGAAGACAAGCAGGCCAAAGAATAAGAAGTGGATGGAACACCTGCAGGTGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | GACTGGACGTTTTCAGGCTCAAACCGGATAAAGTACTaGGCTGTTAAATCTTTCAGCTCTCCTGGGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DWTFSGSNRIKY*AVKSFSSPGSG Trigger: GCCAGACCCAGGAGAGCTGAAAGATTTAACAGCCCAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CAA 90 bp | ATACAGAATTTGCCGACGCTGAAGCCCACATTTTTGCAGATGAATTaGGTTATCTTCACCCCTCCAATGAGGCAGTGGCCGCAGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IQNLPTLKPTFLQMN*VIFTPPMRQWPQSN Trigger: GTTGGACTGCGGCCACTGCCTCATTGGAGGGGTGAAGATAACCAAATTCATCTGCAAAAATGTGGGCTTCAGCGTCGGCAAATTCTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS GCA 72 bp | GTGGAAACACTTGAGGTAGCATTTCTGATGATGAGCTaGTTCTTTGCGGTGGACTGGACGTTTTCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VETLEVAFLMMS*FFAVDWTFSGS Trigger: TGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGCTACCTCAAGTGTTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055775.13 |
||
| CDS CCA 72 bp | GCATTTCTGATGATGAGCTGCTTCTTTGCGGTGGACTaGACGTTTTCAGGCTCAAACCGGATAAAGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFLMMSCFFAVD*TFSGSNRIKYW Trigger: CCAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATCATCAGAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
||
| CDS CCA 72 bp | CAAAGGAGAACCAAATTGGTCAGCTTTTCCTCTGTGTaGGTCGTCAACTCCAAGGTGAGTTGGAGCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QRRTKLVSFSSV*VVNSKVSWSSS Trigger: TGAAGAGCTCCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAAGCTGACCAATTTGGTTCTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS CAA 72 bp | TCCATCCACTTCTTATTCTTTGGCCTGCTTGTCTTCTaGACAGAATCTGTGGTCCTCTCTTTGGCCTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SIHFLFFGLLVF*TESVVLSLAFE Trigger: CTCGAAGGCCAAAGAGAGGACCACAGATTCTGTCAAGAAGACAAGCAGGCCAAAGAATAAGAAGTGGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055775.13 ENSMUST00000140326.8 ENSMUST00000165231.8 |
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| CDS TCA 72 bp | TTGCAGTACACTGTGGAAACACTTGAGCTTGTAAGGTaGAAAACTCAGGATGAACTCTTGGTCCGAGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LQYTVETLELVR*KTQDELLVRVG Trigger: TCCCACTCGGACCAAGAGTTCATCCTGAGTTTTTCACCTTACAAGCTCAAGTGTTTCCACAGTGTACTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140326.8 ENSMUST00000165231.8 |
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