RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031523

Ensembl transcript IDs: ENSMUST00000033923.14, ENSMUST00000098826.10, ENSMUST00000163663.3, ENSMUST00000179501.2

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCATCCGTaGCACTCAGCCAGCAACACACACATTCACACTCCCCTGTGCAAA +
Preference number: 1 (lower is better)
Translates to: GTSQCARHCIASLHP*HSASNTHIHTPLCK
Trigger: TTTGCACAGGGGAGTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 90 bp CATCCGTGCCACTCAGCCAGCAACACACACATTCACACTCCCCTGTaGAAACCCTTCTCTGCTCATCTCAGTGAGAAAACCTGTCCGAGA +
Preference number: 1 (lower is better)
Translates to: HPCHSASNTHIHTPL*KPFSAHLSEKTCPR
Trigger: TCTCGGACAGGTTTTCTCACTGAGATGAGCAGAGAAGGGTTTGCACAGGGGAGTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 90 bp TTCACCAGGCCTTCCTGTTGGTGGGTGAGTGGCTCAGTTGCAGCTTaGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTAAGC +
Preference number: 1 (lower is better)
Translates to: FTRPSCWWVSGSVAA*PWNDSSLSSDFSLS
Trigger: GCTTAAAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGCCACTCACCCACCAACAGGAAGGCCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 90 bp TTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTGTTCTTaGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAGACTCT +
Preference number: 1 (lower is better)
Translates to: FPLLLSIVPLLLLCS*NLWASFLTLVWGDS
Trigger: AGAGTCTCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR TCA 90 bp ACACATTCACACTCCCCTGTGCAAACCCTTCTCTGCTCATCTCAGTaGGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATC +
Preference number: 1 (lower is better)
Translates to: THSHSPVQTLLCSSQ*ENLSESTNYSSGYI
Trigger: GATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTCACTGAGATGAGCAGAGAAGGGTTTGCACAGGGGAGTGTGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR TCA 90 bp CACCCACCCCTGCCCCCAAGTGTTATATATTCCAGTCAAGGTCTATaGTATAGACCTAAGACAGACAGGAAGCAGCTTTATGAACGTGTC +
Preference number: 1 (lower is better)
Translates to: HPPLPPSVIYSSQGL*YRPKTDRKQLYERV
Trigger: GACACGTTCATAAAGCTGCTTCCTGTCTGTCTTAGGTCTATATCATAGACCTTGACTGGAATATATAACACTTGGGGGCAGGGGTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 90 bp GGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGACCTCTTaGGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCC +
Preference number: 1 (lower is better)
Translates to: GNLFNRKVKSGKETS*GLISDLSFASKHRS
Trigger: GGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 90 bp TTAACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTaGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGG +
Preference number: 1 (lower is better)
Translates to: LTPVLGKFRALNSLL*PDVGNLFNRKVKSG
Trigger: CCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 90 bp TACCATTACAGTAAAACCTGTATAAAGACCACCCTTCCAAGACCCTaGGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACT +
Preference number: 1 (lower is better)
Translates to: YHYSKTCIKTTLPRP*AVCFSLRLLSHITT
Trigger: AGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCTTGGAAGGGTGGTCTTTATACAGGTTTTACTGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 90 bp AATGATCAATTTATTAGGTGTCTACAAGTACAAAACACTGACAGCTaGTGTAGAGAAGTAGAAAGATGTGCAGGAGATGAGCCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: NDQFIRCLQVQNTDS*CREVERCAGDEPAL
Trigger: AAGGGCAGGCTCATCTCCTGCACATCTTTCTACTTCTCTACAGCAGCTGTCAGTGTTTTGTACTTGTAGACACCTAATAAATTGATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACCTGGAGGGGGCGGGTaGAGAAGGAAGCTGGATTCC +
Preference number: 2 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGPGGGG*RRKLDS
Trigger: GGAATCCAGCTTCCTTCTTCACCCGCCCCCTCCAGG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 90 bp TTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTaGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGGCC +
Preference number: 2 (lower is better)
Translates to: LLLLCSWNLWASFLT*VWGDSPDFLNLHQA
Trigger: GGCCTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 90 bp GCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTaGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACC +
Preference number: 2 (lower is better)
Translates to: ADSSVTFPLLLSIVP*LLLCSWNLWASFLT
Trigger: GGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGTCTTCTTCCAAGGACTaGCAAGGCTCTAGCAACAAC +
Preference number: 2 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQSSSKD*QGSSNN
Trigger: GTTGTTGCTAGAGCCTTGCCAGTCCTTGGAAGAAGA...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGCTGGATTCCCCATCTaGGTGGCTCCCTGGGTAGTC +
Preference number: 2 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTAGFPI*VAPWVV
Trigger: GACTACCCAGGGAGCCACCCAGATGGGGAATCCAGC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCACCAGGCCTTCCTGTTaGTGGGTGAGTGGCTCAGTT +
Preference number: 2 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLTRPSC*WVSGSV
Trigger: AACTGAGCCACTCACCCACCAACAGGAAGGCCTGGT...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCTACCAACTATTCCAGTaGATACATCGGTCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SASFAEHLSVPDTASHPFYQLFQ*IHRSLS
Trigger: ACTGAGGGACCGATGTATCCACTGGAATAGTTGGTA...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGGTGAAGAAGGAAGCTaGATTCCCCATCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEGEEGS*IPHLGG
Trigger: GCCACCCAGATGGGGAATCCAGCTTCCTTCTTCACC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAGGCTCAGTTGCAGCTTaGCCTTGGAATGATTCGTCA +
Preference number: 2 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVGSVAA*PWNDSS
Trigger: TGACGAATCATTCCAAGGCCAAGCTGCAACTGAGCC...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 90 bp TCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTaGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTC +
Preference number: 2 (lower is better)
Translates to: SSVTFPLLLSIVPLL*LCSWNLWASFLTLV
Trigger: GACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCCAGGAAGCAGCTTTATaGACGTGTCAAATCTCTACA +
Preference number: 2 (lower is better)
Translates to: SASFAEHLSVPDTASHPFQEAAL*TCQIST
Trigger: TGTAGAGATTTGACACGTTCATAAAGCTGCTTCCTG...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACAGGAAGCAGCTTTATaGACGTGTCAAATCTCTACA +
Preference number: 2 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGQEAAL*TCQIST
Trigger: TGTAGAGATTTGACACGTTCATAAAGCTGCTTCCTG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATTCACACTCCCCTGTaGAAACCCTTCTCTGCTCAT +
Preference number: 2 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSIHTPL*KPFSAH
Trigger: ATGAGCAGAGAAGGGTTTGCACAGGGGAGTGTGAAT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGCATCCCTTCATCCGTaGCACTCAGCCAGCAACACA +
Preference number: 2 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTASLHP*HSASNT
Trigger: TGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCACCCTTCCAAGACCCTaGGCTGTTTGCTTTTCACTG +
Preference number: 2 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLTLPRP*AVCFSL
Trigger: CAGTGAAAAGCAAACAGCGCAGGGTCTTGGAAGGGT...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTATCTTCTTCCAAGGACTaGCAAGGCTCTAGCAACAAC +
Preference number: 2 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVSSSKD*QGSSNN
Trigger: GTTGTTGCTAGAGCCTTGCCAGTCCTTGGAAGAAGA...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTAAGCTGATGCATCTTTaGTCTTTGCTTGGCACGGGG +
Preference number: 2 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLKLMHL*SLLGTG
Trigger: CCCCGTGCCAAGCAAAGACCAAAGATGCATCAGCTT...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 90 bp AAAGTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTaGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: KVGKRPLADSSVTFP*LLSIVPLLLLCSWN
Trigger: GTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACCTGGAGGGGGCGGGTaGAGAAGGAAGCTGGATTCC +
Preference number: 2 (lower is better)
Translates to: LLSHITTKIQFKGIMRERPGGGG*RRKLDS
Trigger: GGAATCCAGCTTCCTTCTTCACCCGCCCCCTCCAGG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAGCATCCCTTCATCCGTaGCACTCAGCCAGCAACACA +
Preference number: 2 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKASLHP*HSASNT
Trigger: TGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGC...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACTTGATACTTTGCTTATaGGTGGGGTGTGTCAGCATT +
Preference number: 2 (lower is better)
Translates to: HRSVAVALFLEPLGILSDLILCL*VGCVSI
Trigger: AATGCTGACACACCCCACCCATAAGCAAAGTATCAA...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCGTTGCAGCTTGGCCTTaGAATGATTCGTCATTGTCG +
Preference number: 2 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLVAAWP*NDSSLS
Trigger: CGACAATGACGAATCATTCCAAGGCCAAGCTGCAAC...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACTGTTTGCTTTTCACTaGGATTACTATCCCACATTA +
Preference number: 2 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGLFAFH*DYYPTL
Trigger: TAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAACAATTAACAGCCTCTaGTGTTTGGTTGGGTTAAAC +
Preference number: 2 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVTINSL*CLVGLN
Trigger: GTTTAACCCAACCAAACACCAGAGGCTGTTAATTGT...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGTTCGTCATTGTCGTCTaGCTTCTCTTTAAGCTGATG +
Preference number: 2 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEFVIVV*LLFKLM
Trigger: CATCAGCTTAAAGAGAAGTCAGACGACAATGACGAA...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCCGGAACATCTCAGTGTaGCAGACACTGCATCGCATC +
Preference number: 2 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEARNISV*QTLHRI
Trigger: GATGCGATGCAGTGTCTGGCACACTGAGATGTTCCG...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR TCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGAAATCAGAAAGCGTTaGTACTTTGCTTATGGGTGG +
Preference number: 2 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTEIRKR*YFAYGW
Trigger: CCACCCATAAGCAAAGTATCAACGCTTTCTGATTTC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR GCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAATTCACACTCCCCTGTaGAAACCCTTCTCTGCTCAT +
Preference number: 2 (lower is better)
Translates to: LLSHITTKIQFKGIMRERIHTPL*KPFSAH
Trigger: ATGAGCAGAGAAGGGTTTGCACAGGGGAGTGTGAAT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCTACCAACTATTCCAGTaGATACATCGGTCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAYQLFQ*IHRSLS
Trigger: ACTGAGGGACCGATGTATCCACTGGAATAGTTGGTA...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACTCCTTTGTGTATCTTaGAGTTCATGTCACAAACAA +
Preference number: 2 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKLLCVS*SSCHKQ
Trigger: TTGTTTGTGACATGAACTCCAAGATACACAAAGGAG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CCA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGGGAAGCTACAGTTTATaGGAAAGCAAAGGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKGSYSL*ESKGLQ
Trigger: CTGCAAACCTTTGCTTTCCCATAAACTGTAGCTTCC...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp AGGGGGCGGGTGAAGAAGGAAGCTGGATTCCCCATCTaGGTGGCTCCCTGGGTAGTCAGCTATTCCAGGTTG +
Preference number: 3 (lower is better)
Translates to: RGRVKKEAGFPI*VAPWVVSYSRL
Trigger: CAACCTGGAATAGCTGACTACCCAGGGAGCCACCCAGATGGGGAATCCAGCTTCCTTCTTCACCCGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp TTAATAACCCTGGAGGGGGCGGGTGAAGAAGGAAGCTaGATTCCCCATCTGGGTGGCTCCCTGGGTAGTCAG +
Preference number: 3 (lower is better)
Translates to: LITLEGAGEEGS*IPHLGGSLGSQ
Trigger: CTGACTACCCAGGGAGCCACCCAGATGGGGAATCCAGCTTCCTTCTTCACCCGCCCCCTCCAGGGTTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp CAGTGTGCCAGACACTGCATCGCATCCCTTCATCCGTaGCACTCAGCCAGCAACACACACATTCACACTCCC +
Preference number: 3 (lower is better)
Translates to: QCARHCIASLHP*HSASNTHIHTP
Trigger: GGGAGTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAGTGTCTGGCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp CTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTaGCAGACACTGCATCGCATCCCTTCATCCGTGCCA +
Preference number: 3 (lower is better)
Translates to: LVDQHPLRNISV*QTLHRIPSSVP
Trigger: TGGCACGGATGAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp GTCAATCAGACCCAGATGAACTCTTCTTCCAAGGACTaGCAAGGCTCTAGCAACAACCGCCCGGGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: VNQTQMNSSSKD*QGSSNNRPGCS
Trigger: ACTGCAACCCGGGCGGTTGTTGCTAGAGCCTTGCCAGTCCTTGGAAGAAGAGTTCATCTGGGTCTGATTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp CCTTCCTGTTGGTGGGTGAGTGGCTCAGTTGCAGCTTaGCCTTGGAATGATTCGTCATTGTCGTCTGACTTC +
Preference number: 3 (lower is better)
Translates to: PSCWWVSGSVAA*PWNDSSLSSDF
Trigger: GAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGCCACTCACCCACCAACAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp ATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTaGGCATCCTTTCTGACCTTGGTCTGGGGAGACTCT +
Preference number: 3 (lower is better)
Translates to: IVPLLLLCSWNL*ASFLTLVWGDS
Trigger: AGAGTCTCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCGCTGTTGCTCTGTTCTaGGAACCTCTGGGCATCCTT +
Preference number: 3 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSAVALF*EPLGIL
Trigger: AAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGC...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp CACTCAGCCAGCAACACACACATTCACACTCCCCTGTaGAAACCCTTCTCTGCTCATCTCAGTGAGAAAACC +
Preference number: 3 (lower is better)
Translates to: HSASNTHIHTPL*KPFSAHLSEKT
Trigger: GGTTTTCTCACTGAGATGAGCAGAGAAGGGTTTGCACAGGGGAGTGTGAATGTGTGTGTTGCTGGCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTATAGAGTGAGGCAGTaGTTCAAGACCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLYRVRQ*FKTSLG
Trigger: GCCCAGGCTGGTCTTGAACAACTGCCTCACTCTATA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAAAGACCCTGCGCTGTTaGCTTTTCACTGAGATTACT +
Preference number: 3 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGKTLRC*LFTEIT
Trigger: AGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCTT...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAGCTCCTTTGTGTATCTaGGAGTTCATGTCACAAACA +
Preference number: 3 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGAPLCI*EFMSQT
Trigger: TGTTTGTGACATGAACTCCAAGATACACAAAGGAGC...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTATCAGTGACCTTTCCTTaGCTTCTAAGCATCGTTCCG +
Preference number: 3 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVSVTFP*LLSIVP
Trigger: CGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGA...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp GTGAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTaGATACATCGGTCCCTCAGTACACCGCAAACAAAG +
Preference number: 3 (lower is better)
Translates to: VRKPVREYQLFQ*IHRSLSTPQTK
Trigger: CTTTGTTTGCGGTGTACTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp TGTTGGTGGGTGAGTGGCTCAGTTGCAGCTTGGCCTTaGAATGATTCGTCATTGTCGTCTGACTTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: CWWVSGSVAAWP*NDSSLSSDFSL
Trigger: TAAAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGCCACTCACCCACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTGCGCCGAAAAAGTTCTaGCTTCTCAGAAGCAATCTG +
Preference number: 3 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLAPKKF*LLRSNL
Trigger: CAGATTGCTTCTGAGAAGCAAGAACTTTTTCGGCGC...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR TCA 72 bp ACCCCATTAAAATACACACATAGCCGTCAGGAACACTaGCAGCACCACCCACAATTAACAGCCTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: TPLKYTHSRQEH*QHHPQLTASGV
Trigger: AACACCAGAGGCTGTTAATTGTGGGTGGTGCTGTCAGTGTTCCTGACGGCTATGTGTGTATTTTAATGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp GTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTaGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTC +
Preference number: 3 (lower is better)
Translates to: VLGKFRALNSLL*PDVGNLFNRKV
Trigger: GACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGCGCCGAAAAAGTTCTaGCTTCTCAGAAGCAATCTG +
Preference number: 3 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTAPKKF*LLRSNL
Trigger: CAGATTGCTTCTGAGAAGCAAGAACTTTTTCGGCGC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp ACACCCAGTACTGGAAATCAGAAAGCGTTGATACTTTaGTTATGGGTGGGGTGTGTCAGCATTCAGCTTTTC +
Preference number: 3 (lower is better)
Translates to: TPSTGNQKALIL*LWVGCVSIQLF
Trigger: GAAAAGCTGAATGCTGACACACCCCACCCATAAGCAAAGTATCAACGCTTTCTGATTTCCAGTACTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAGTAGATCAGCATCCTTaGCGGAACATCTCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIVDQHP*RNISVC
Trigger: GCACACTGAGATGTTCCGCAAAGGATGCTGATCTAC...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGCTCCTTTGTGTATCTaGGAGTTCATGTCACAAACA +
Preference number: 3 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEAPLCI*EFMSQT
Trigger: TGTTTGTGACATGAACTCCAAGATACACAAAGGAGC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR TCA 72 bp CCACCCTTCCAAGACCCTGCGCTGTTTGCTTTTCACTaGGATTACTATCCCACATTACCACTAAAATACAGT +
Preference number: 3 (lower is better)
Translates to: PPFQDPALFAFH*DYYPTLPLKYS
Trigger: ACTGTATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCTTGGAAGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp AGTAAAACCTGTATAAAGACCACCCTTCCAAGACCCTaGGCTGTTTGCTTTTCACTGAGATTACTATCCCAC +
Preference number: 3 (lower is better)
Translates to: SKTCIKTTLPRP*AVCFSLRLLSH
Trigger: GTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCTTGGAAGGGTGGTCTTTATACAGGTTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp TTCAACAGGAAAGTCAAAAGTGGGAAAGAGACCTCTTaGGGACTCATCAGTGACCTTTCCTTTGCTTCTAAG +
Preference number: 3 (lower is better)
Translates to: FNRKVKSGKETS*GLISDLSFASK
Trigger: CTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCACTTTTGACTTTCCTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CCA 72 bp AGTACTGGAAATCAGAAAGCGTTGATACTTTGCTTATaGGTGGGGTGTGTCAGCATTCAGCTTTTCCATCTC +
Preference number: 3 (lower is better)
Translates to: STGNQKALILCL*VGCVSIQLFHL
Trigger: GAGATGGAAAAGCTGAATGCTGACACACCCCACCCATAAGCAAAGTATCAACGCTTTCTGATTTCCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATATAGAGTGAGGCAGTaGTTCAAGACCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LLSHITTKIQFKGIMRERYRVRQ*FKTSLG
Trigger: GCCCAGGCTGGTCTTGAACAACTGCCTCACTCTATA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR GCA 72 bp TTTATTAGGTGTCTACAAGTACAAAACACTGACAGCTaGTGTAGAGAAGTAGAAAGATGTGCAGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: FIRCLQVQNTDS*CREVERCAGDE
Trigger: CTCATCTCCTGCACATCTTTCTACTTCTCTACAGCAGCTGTCAGTGTTTTGTACTTGTAGACACCTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACTGTGGGCTGCGTGGGTaGGGACGCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDCGLRG*GRCCWC
Trigger: GCACCAGCAGCAGCGTCCCCACCCACGCAGCCCACA...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACTGTGGTGGGAGCCCTTaGGCTTCAGGCTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHCGGSP*ASGSPC
Trigger: GCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACA...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACGCGCTGCTGGTCTCTaGTTGGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGRAAGL*LAAAAA
Trigger: AGCAGCAGCAGCAGCCAATCAGAGACCAGCAGCGCG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAGAGGCCACCTCCTGGTaGTCGCTGAGGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGEATSW*SLRSVS
Trigger: GCTGACAGACCTCAGCGAGCACCAGGAGGTGGCCTC...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCTGTGGGCTGCGTGGGTaGGGACGCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSCGLRG*GRCCWC
Trigger: GCACCAGCAGCAGCGTCCCCACCCACGCAGCCCACA...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACGCCTGCTGGATGCTCTaGGGCAGGGGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDACWML*GRGCPE
Trigger: CTCAGGACAGCCCCTGCCCCAGAGCATCCAGCAGGC...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACTCTCGGACCACTGGTTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHSRTTG*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGA...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCGCATGGCCTGCTGGATaGTCTGGGGCAGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSAWPAG*SGAGAV
Trigger: GACAGCCCCTGCCCCAGAGCATCCAGCAGGCCATGC...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGACAGAGGCCACCTCCTaGTGCTCGCTGAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQTEATS*CSLRSV
Trigger: GACAGACCTCAGCGAGCACCAGGAGGTGGCCTCTGT...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAACAGAGGCCACCTCCTaGTGCTCGCTGAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGTEATS*CSLRSV
Trigger: GACAGACCTCAGCGAGCACCAGGAGGTGGCCTCTGT...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACCTGCTGGTCTCTGATTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAATCAGAGACCAGCAG...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGATGTGCCTATTGCACCTaGTCAGGGAAGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGCAYCT*SGKPPP
Trigger: GGGTGGGGGCTTCCCTGACCAGGTGCAATAGGCACA...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGTTTCTCTCCGTAGGCTaGGATGGCCAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQFLSVG*DGQGHG
Trigger: TCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAA...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAGACAGAGTCCAGGGCTaGGTCCGAGTCTCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVDRVQG*VRVSLV
Trigger: GACGAGGGAGACTCGGACTCAGCCCTGGACTCTGTC...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGATGTGGGCCAGCCCTTaGGTCGCCGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQMWASP*VAARFS
Trigger: TGAAAACCTAGCGGCGACTCAAGGGCTGGCCCACAT...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCTCCACTGTGGGCTaGGTGGGTGGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSISTVG*VGGDAA
Trigger: AGCAGCGTCCCCACCCACGCAGCCCACAGTGGAGAT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCTCTCTGATTGGCTGCTaGTGCTGCTGGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SASFAEHLSVPDTASHPFSLIGC*CCWSGW
Trigger: CCACCCAGACCAGCAGCAGCAGCAGCCAATCAGAGA...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTGTGGCATCTCCACTGTaGGCTGCGTGGGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLVASPL*AAWVGT
Trigger: CGTCCCCACCCACGCAGCCCACAGTGGAGATGCCAC...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACGGACAGAAACTGCCATaGGAGAGGGCCTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHGQKLP*ERALGK
Trigger: CTTCCCTAAGGCCCTCTCCCATGGCAGTTTCTGTCC...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATGGCCGGTGGGAGCTCTaGAAGCTGTGCCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHGRWEL*KLCHLS
Trigger: ACTGAGGTGGCACAGCTTCCAGAGCTCCCACCGGCC...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGGGCCGGTGGGAGCTCTaGAAGCTGTGCCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQGRWEL*KLCHLS
Trigger: ACTGAGGTGGCACAGCTTCCAGAGCTCCCACCGGCC...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGTTGAGGCTCGGCCGGTaGGAGCTCTGGAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQLRLGR*ELWKLC
Trigger: GCACAGCTTCCAGAGCTCCCACCGGCCGAGCCTCAA...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCGACAGAGTCCAGGGCTaGGTCCGAGTCTCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLDRVQG*VRVSLV
Trigger: GACGAGGGAGACTCGGACTCAGCCCTGGACTCTGTC...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCACGGGGGTCCTTCGCTaGCCTTCTTATAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SASFAEHLSVPDTASHPFTGVLR*PSYRTA
Trigger: AGCTGTCCTATAAGAAGGTCAGCGAAGGACCCCCGT...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTGATTGGCTGCTGCTaGTGCTGGTCTGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDLIGCC*CWSGWS
Trigger: ACTCCACCCAGACCAGCAGCAGCAGCAGCCAATCAG...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGAGCTGGACAGTTCCTTaGGAGACGGCAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQSWTVP*ETAGWK
Trigger: TTTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCT...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTCCGTAGGCTGAGATaGCCAGGGCCATGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDLRRLR*PGPWKL
Trigger: AAGCTTCCATGGCCCTGGCCATCTCAGCCTACGGAG...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACGGTGTCCTTCGGTCATaGTCCACATCCAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHGVLRS*STSRCI
Trigger: GATACACCTGGATGTGGACCATGACCGAAGGACACC...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCTGTGCCTATTGCACCTaGTCAGGGAAGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSCAYCT*SGKPPP
Trigger: GGGTGGGGGCTTCCCTGACCAGGTGCAATAGGCACA...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCGCGCTTTCATTCATCTaGCGTAGAGCCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: SASFAEHLSVPDTASHPFALSFI*RRAWIR
Trigger: CCGGATCCAGGCTCTACGCCAGATGAATGAAAGCGC...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTATTTCTCTCCGTAGGCTaGGATGGCCAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVFLSVG*DGQGHG
Trigger: TCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAA...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGGCTCTTCGGGCTCATTaGGGGAGTTGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQALRAH*GSCLCC
Trigger: ACAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGC...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTACTGATTGGCTGCTGCTaGTGCTGGTCTGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVLIGCC*CWSGWS
Trigger: ACTCCACCCAGACCAGCAGCAGCAGCAGCCAATCAG...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACGTACGTTATCATAGATaGTCAGGCGGCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHVRYHR*SGGCSE
Trigger: CTCTGAGCAGCCGCCTGAGCATCTATGATAACGTAC...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACAAACGAGAGTTGTCTaGGGACCCAGGGATTGGATC +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGQTRVV*GPRDWI
Trigger: GATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGGCCTTGTGCTTGCTGTaGTGGGAGCCCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQALCLL*WEPLSF
Trigger: GAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGC...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAGGAGGCGCTGGTCCTTaGGAACATACTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGGGAGP*EHTGRS
Trigger: AGATCTACCAGTATGTTCCCAAGGACCAGCGCCTCC...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCGGAGGCGCTGGTCCTTaGGAACATACTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: SASFAEHLSVPDTASHPFGGAGP*EHTGRS
Trigger: AGATCTACCAGTATGTTCCCAAGGACCAGCGCCTCC...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGCCGCCTTGATGGCTTaGAGGCGCTGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEAALMA*RRWSLG
Trigger: TCCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 72 bp CTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTaGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: LCSWNLWASFLT*VWGDSPDFLNL
Trigger: AAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTATGTGGGCCAGCCCTTaGGTCGCCGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLMWASP*VAARFS
Trigger: TGAAAACCTAGCGGCGACTCAAGGGCTGGCCCACAT...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTCGTGATCCACAGAGGTaGGTAAGAGAGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLRDPQR*VREHRP
Trigger: GGGCCTGTGCTCTCTTACTCACCTCTGTGGATCACG...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTGGTCTCTGATTGGCTaGTGCTGCTGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLWSLIG*CCCWSG
Trigger: CCCAGACCAGCAGCAGCAGCAGCCAATCAGAGACCA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAGAGCTCTGGAAGCTGTaGCACCTCAGTCTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVELWKL*HLSLCL
Trigger: TAGGCACAGACTGAGGTGGCACAGCTTCCAGAGCTC...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGGACTGGCAGTTAATCTaGAGTGACACGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQDWQLI*SDTELR
Trigger: CCTCAACTCCGTGTCACTGCAGATTAACTGCCAGTC...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGATCCACTTGCCGCTTATaGCGCAAGGCTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGSTCRL*RKAHLH
Trigger: ATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGA...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACATGGGCACGTTGATGTaGTTGCCATTGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDMGTLM*LPLRAE
Trigger: CTCAGCCCTCAATGGCAACCACATCAACGTGCCCAT...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCCTGCTGGTCTCTGATTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAATCAGAGACCAGCAG...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCGGACAGAAACTGCCATaGGAGAGGGCCTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSGQKLP*ERALGK
Trigger: CTTCCCTAAGGCCCTCTCCCATGGCAGTTTCTGTCC...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGTGCTGTCCAGGTCACTaGGTGTCCTTCGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQCCPGH*VSFGHG
Trigger: ACCATGACCGAAGGACACCCAGTGACCTGGACAGCA...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACTGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDCSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCCACGTTCACAGTCAGTaGGACCCCAAACACACTCCG +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSHVHSQ*DPKHTP
Trigger: CGGAGTGTGTTTGGGGTCCCACTGACTGTGAACGTG...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATGGCTTGGAGGCGCTaGTCCTTGGGAACATACTGG +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSMAWRR*SLGTYW
Trigger: CCAGTATGTTCCCAAGGACCAGCGCCTCCAAGCCAT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTGTGGAGTCTCTGATGTaGTCGCTGAAGGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLVESLM*SLKDLR
Trigger: GCGGAGGTCCTTCAGCGACCACATCAGAGACTCCAC...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTCACTTCGCTTCCGGTaGGGACTGATCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLSLRFR*GLISSF
Trigger: GAAGCTGGAGATCAGTCCTCACCGGAAGCGAAGTGA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGAGCCCTCTAGATACATaGCCACCCGCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQSPLDT*PPACYR
Trigger: CCTGTAACAAGCGGGTGGGCATGTATCTAGAGGGCT...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCAGATGCTCAGGCGGCTaGTCAGAGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSRCSGG*SESWKN
Trigger: ATTCTTCCAGCTCTCTGAGCAGCCGCCTGAGCATCT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGAGGAGCGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQRSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCGCTCCT...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGTGGCATCTCCACTGTaGGCTGCGTGGGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYVASPL*AAWVGT
Trigger: CGTCCCCACCCACGCAGCCCACAGTGGAGATGCCAC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGCCTTGTGCTTGCTGTaGTGGGAGCCCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEALCLL*WEPLSF
Trigger: GAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATGGGCACGTTGATGTaGTTGCCATTGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSMGTLM*LPLRAE
Trigger: CTCAGCCCTCAATGGCAACCACATCAACGTGCCCAT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACGGCTGCTCAGAGAGCTaGAAGAATTGCGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRSVAVALFLEPLGILSDGCSES*KNCVSS
Trigger: TGAAGAGACGCAATTCTTCCAGCTCTCTGAGCAGCC...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATTGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHCSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACCAGGTCTTTCTGGTCTaGTTTGCCCAAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHQVFLV*FAQTLF
Trigger: AAACAGAGTTTGGGCAAACCAGACCAGAAAGACCTG...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTACTTTCACAGCCGCTGTaGCATCGCTCAGGAAATAGA +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVLSQPL*HRSGNR
Trigger: TCTATTTCCTGAGCGATGTCACAGCGGCTGTGAAAG...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACATGGTCTCTGATTGGCTaGTGCTGCTGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTWSLIG*CCCWSG
Trigger: CCCAGACCAGCAGCAGCAGCAGCCAATCAGAGACCA...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCAGCCCTCTAGATACATaGCCACCCGCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLSPLDT*PPACYR
Trigger: CCTGTAACAAGCGGGTGGGCATGTATCTAGAGGGCT...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAGACTGGCAGTTAATCTaGAGTGACACGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVDWQLI*SDTELR
Trigger: CCTCAACTCCGTGTCACTGCAGATTAACTGCCAGTC...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCAGGAGCGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLRSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCGCTCCT...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTGCAGAGAGCCTCGATaGCGTCTCTGTCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLCREPR*RLCPRS
Trigger: ACTTCTTGGACAGAGACGCCATCGAGGCTCTCTGCA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATTCCACTTGCCGCTTATaGCGCAAGGCTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHSTCRL*RKAHLH
Trigger: ATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGA...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATTGGGAGACGGCAGGCTaGAAAAAGAGTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHWETAG*KKSHHC
Trigger: GCAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCA...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCGTGTTCTTCTCGTGGTaGCCTTTCATGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: SASFAEHLSVPDTASHPFVFFSW*PFMLKL
Trigger: CAGTTTTAGCATGAAAGGCCACCACGAGAAGAACAC...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGTGCTGTCCAGGTCACTaGGTGTCCTTCGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKECCPGH*VSFGHG
Trigger: ACCATGACCGAAGGACACCCAGTGACCTGGACAGCA...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 72 bp TCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTaGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: SVTFPLLLSIVP*LLLCSWNLWAS
Trigger: GGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACATCACTTCGCTTCCGGTaGGGACTGATCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTSLRFR*GLISSF
Trigger: GAAGCTGGAGATCAGTCCTCACCGGAAGCGAAGTGA...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATTATCTGTTTTGGAGATaGCGGGCAAGGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHYLFWR*RARRDR
Trigger: TCTGTCTCTCCTTGCCCGTCATCTCCAAAACAGATA...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGGAAGCCCCCACCCCTaGGTCTCTTCTTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYGSPHP*VSSFRD
Trigger: ATCCCGGAAAGAAGAGACTCAGGGGTGGGGGCTTCC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAGGAAGCCCCCACCCCTaGGTCTCTTCTTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIGSPHP*VSSFRD
Trigger: ATCCCGGAAAGAAGAGACTCAGGGGTGGGGGCTTCC...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGTCTGGAAAGTCCACTTaGCGCTTATGGCGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKESGKST*RLWRKA
Trigger: AGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGA...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCATCTCCACTGTGGGCTaGGTGGGTGGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAISTVG*VGGDAA
Trigger: AGCAGCGTCCCCACCCACGCAGCCCACAGTGGAGAT...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAGCATGGCCTGCTGGATaGTCTGGGGCAGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERAWPAG*SGAGAV
Trigger: GACAGCCCCTGCCCCAGAGCATCCAGCAGGCCATGC...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACCTTTCTGGTCTGGTTTaGCCAAACTCTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHLSGLV*PNSVFF
Trigger: AAAGAAAACAGAGTTTGGGCAAACCAGACCAGAAAG...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGCTTTACCACTTCGGCTaGACACAAATGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQLYHFG*TQMSKR
Trigger: TCTTTTGGACATTTGTGTGCAGCCGAAGTGGTAAAG...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGCAAACGAGAGTTGTCTaGGGACCCAGGGATTGGATC +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEQTRVV*GPRDWI
Trigger: GATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTG...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCGCCGCCTTGATGGCTTaGAGGCGCTGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAAALMA*RRWSLG
Trigger: TCCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGC...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATTTGGTGGGAGTCATCTaGTTTTCTTTCACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHLVGVI*FSFTAA
Trigger: AGCGGCTGTGAAAGAAAACCAGATGACTCCCACCAA...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCGGATTTCAATCACCTTaGAGTCCAGCAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSGFQSP*SPAGPH
Trigger: ATGTGGACCTGCTGGACTCCAAGGTGATTGAAATCC...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAAGTCGCAAGCTTCCTTaGCTTCAATTTCTGCTAGCC +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVSRKLP*LQFLLA
Trigger: GGCTAGCAGAAATTGAAGCCAAGGAAGCTTGCGACT...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
3UTR CAA 72 bp ACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTaGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TFPLLLSIVPLL*LCSWNLWASFL
Trigger: CAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCTGTGGTGGGAGCCCTTaGGCTTCAGGCTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEACGGSP*ASGSPC
Trigger: GCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACA...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTATCTGTTTTGGAGATaGCGGGCAAGGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLYLFWR*RARRDR
Trigger: TCTGTCTCTCCTTGCCCGTCATCTCCAAAACAGATA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGCTCTTCGGGCTCATTaGGGGAGTTGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYALRAH*GSCLCC
Trigger: ACAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCTGGGCACAGCCCAGCTaGAGCCGTGCTTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAWAQPS*SRACWK
Trigger: CTTCCAACAAGCACGGCTTCAGCTGGGCTGTGCCCA...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCCTCGCTTCAGGGTGTTaGGGTGGAAGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEALASGC*GGRGTE
Trigger: CTCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAG...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAATGTCCAAAAGATTTTaGGTACCACTCCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVMSKRF*VPLRHV
Trigger: CACATGCCGGAGTGGTACTCAAAATCTTTTGGACAT...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGTTGCTTTCAGTGTTCTaGTTACTGAAGGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQLLSVF*LLKESR
Trigger: CCGAGACTCCTTCAGTAATCAGAACACTGAAAGCAA...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACATCTGGAAAGTCCACTTaGCGCTTATGGCGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTSGKST*RLWRKA
Trigger: AGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGA...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATATCTCTGATTGGCTGCTaGTGCTGCTGGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKISLIGC*CCWSGW
Trigger: CCACCCAGACCAGCAGCAGCAGCAGCCAATCAGAGA...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGTACAGCTGTGCATACTaGGGGAAACCAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEYSCAY*GKPVTL
Trigger: GAGAGTGACTGGTTTCCCCCAGTATGCACAGCTGTA...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACGCTTGCTGTCCCTCTaGAAAGTCCACTTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKRLLSL*KVHLPL
Trigger: AAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGGATTGGATCCTGCTTTaGGGAAAAGACGTCAAACTC +
Preference number: 4 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQDWILL*GKDVKL
Trigger: GAGTTTGACGTCTTTTCCCCAAAGCAGGATCCAATC...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAGTGTTCTTCTCGTGGTaGCCTTTCATGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVVFFSW*PFMLKL
Trigger: CAGTTTTAGCATGAAAGGCCACCACGAGAAGAACAC...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGAACACCGTGTCCTCTaGGTAGCTCTCACGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEEHRVL*VALTVF
Trigger: AAAAACCGTGAGAGCTACCCAGAGGACACGGTGTTC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTCCTTAGGACTGTCATaGCTGTTTTCTCTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLSLGLS*LFSLRR
Trigger: CCTACGGAGAGAAAACAGCCATGACAGTCCTAAGGA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGGTGTCCTTCGGTCATaGTCCACATCCAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTGVLRS*STSRCI
Trigger: GATACACCTGGATGTGGACCATGACCGAAGGACACC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATTGAGGCTCGGCCGGTaGGAGCTCTGGAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERLRLGR*ELWKLC
Trigger: GCACAGCTTCCAGAGCTCCCACCGGCCGAGCCTCAA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGGCCTGCTGGATGCTCTaGGGCAGGGGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKACWML*GRGCPE
Trigger: CTCAGGACAGCCCCTGCCCCAGAGCATCCAGCAGGC...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTACAGGTCTTTCTGGTCTaGTTTGCCCAAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVQVFLV*FAQTLF
Trigger: AAACAGAGTTTGGGCAAACCAGACCAGAAAGACCTG...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCTCATTCAGGTCTTTCTaGTCTGGTTTGCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSSFRSF*SGLPKL
Trigger: GAGTTTGGGCAAACCAGACCAGAAAGACCTGAATGA...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCTCTCGGACCACTGGTTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEASRTTG*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGA...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATGGGCACAGCCCAGCTaGAGCCGTGCTTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERWAQPS*SRACWK
Trigger: CTTCCAACAAGCACGGCTTCAGCTGGGCTGTGCCCA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAAGAGTTTGTTCGTCATaGGGGGCTCAGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTRVCSS*GAQEDL
Trigger: GAGATCTTCCTGAGCCCCTCATGACGAACAAACTCT...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAGAGCTCTGGAAGCTGTaGCACCTCAGTCTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIELWKL*HLSLCL
Trigger: TAGGCACAGACTGAGGTGGCACAGCTTCCAGAGCTC...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAACATCCCAGAGGTGTTaGTCCTTCAGAAGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTTSQRC*SFRRRF
Trigger: AAAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGT...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGTTTGTGTTAGGATCATaGTGTCCGGCTCGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEFVLGS*CPARLY
Trigger: GTAGAGACGAGCCGGACACCATGATCCTAACACAAA...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS-3UTR CCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACAGCTGGACAGTTCCTTaGGAGACGGCAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYSWTVP*ETAGWK
Trigger: TTTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCT...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAAACTTCTCGGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTNFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAACCAGTGGTCCGAGAAGTT...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACATGGCTTGGAGGCGCTaGTCCTTGGGAACATACTGG +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYMAWRR*SLGTYW
Trigger: CCAGTATGTTCCCAAGGACCAGCGCCTCCAAGCCAT...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTCATTCAGGTCTTTCTaGTCTGGTTTGCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLSFRSF*SGLPKL
Trigger: GAGTTTGGGCAAACCAGACCAGAAAGACCTGAATGA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGATTTCCTCAGGGACCTaGAAGAGCTTCTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEISSGT*KSFLHS
Trigger: TGAGTGCAAGAAGCTCTTCCAGGTCCCTGAGGAAAT...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGCTCGCTTCAGGGTGTTaGGGTGGAAGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKLASGC*GGRGTE
Trigger: CTCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAG...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCACGGGGGTCCTTCGCTaGCCTTCTTATAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEATGVLR*PSYRTA
Trigger: AGCTGTCCTATAAGAAGGTCAGCGAAGGACCCCCGT...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACGTGATCCACAGAGGTaGGTAAGAGAGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERRDPQR*VREHRP
Trigger: GGGCCTGTGCTCTCTTACTCACCTCTGTGGATCACG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAGTACGTTATCATAGATaGTCAGGCGGCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKVRYHR*SGGCSE
Trigger: CTCTGAGCAGCCGCCTGAGCATCTATGATAACGTAC...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATATGGGGACCCAGGGATTaGATCCTGCTTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIWGPRD*ILLWGK
Trigger: TTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCA...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GCTCAGTTGCAGCTTGGCCTTGGAATGATTCGTCATTGTCGTCTGACTTCTCTTTTGGTGTTCTTCTCGTaGTGGCCTTTCATGCTAAAA +
Preference number: 4 (lower is better)
Translates to: AQLQLGLGMIRHCRLTSLLVFFS*WPFMLK
Trigger: TTTTAGCATGAAAGGCCACCACGAGAAGAACACCAA...AAGAGAAGTCAGACGACAATGACGAATCATTCCAAGGCCAAGCTGCAACTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACTCCGTAGGCTGAGATaGCCAGGGCCATGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERLRRLR*PGPWKL
Trigger: AAGCTTCCATGGCCCTGGCCATCTCAGCCTACGGAG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 72 bp CTGTATAAAGACCACCCTTCCAAGACCCTGCGCTGTTaGCTTTTCACTGAGATTACTATCCCACATTACCAC +
Preference number: 4 (lower is better)
Translates to: LYKDHPSKTLRC*LFTEITIPHYH
Trigger: GTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCTTGGAAGGGTGGTCTTTATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACAGAGTTTGTTCGTCATaGGGGGCTCAGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYRVCSS*GAQEDL
Trigger: GAGATCTTCCTGAGCCCCTCATGACGAACAAACTCT...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAAAGCTTGGATTTTCCTaGCCCGCAGGGTTCAATCAA +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKKLGFS*PAGFNQ
Trigger: TTGATTGAACCCTGCGGGTCAGGAAAATCCAAGCTT...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACGCTTGCTGTCCCTCTaGAAAGTCCACTTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERRLLSL*KVHLPL
Trigger: AAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCTGGGGACCCAGGGATTaGATCCTGCTTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAWGPRD*ILLWGK
Trigger: TTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCA...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACTGGGAGACGGCAGGCTaGAAAAAGAGTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYWETAG*KKSHHC
Trigger: GCAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCA...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAGAACACCGTGTCCTCTaGGTAGCTCTCACGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIEHRVL*VALTVF
Trigger: AAAAACCGTGAGAGCTACCCAGAGGACACGGTGTTC...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGGCTGCTCAGAGAGCTaGAAGAATTGCGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYGCSES*KNCVSS
Trigger: TGAAGAGACGCAATTCTTCCAGCTCTCTGAGCAGCC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACACGTTCACAGTCAGTaGGACCCCAAACACACTCCG +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERHVHSQ*DPKHTP
Trigger: CGGAGTGTGTTTGGGGTCCCACTGACTGTGAACGTG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATGTCCAAAAGATTTTaGGTACCACTCCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKMSKRF*VPLRHV
Trigger: CACATGCCGGAGTGGTACTCAAAATCTTTTGGACAT...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAATTGCTTTCAGTGTTCTaGTTACTGAAGGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKLLSVF*LLKESR
Trigger: CCGAGACTCCTTCAGTAATCAGAACACTGAAAGCAA...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAAGATGCTCAGGCGGCTaGTCAGAGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERRCSGG*SESWKN
Trigger: ATTCTTCCAGCTCTCTGAGCAGCCGCCTGAGCATCT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGCTTTCTGGTCTGGTTTaGCCAAACTCTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKELSGLV*PNSVFF
Trigger: AAAGAAAACAGAGTTTGGGCAAACCAGACCAGAAAG...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAGATTGGATCCTGCTTTaGGGAAAAGACGTCAAACTC +
Preference number: 4 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKDWILL*GKDVKL
Trigger: GAGTTTGACGTCTTTTCCCCAAAGCAGGATCCAATC...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACATTGGTGTTCTTCTCGTaGTGGCCTTTCATGCTAAAA +
Preference number: 4 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTLVFFS*WPFMLK
Trigger: TTTTAGCATGAAAGGCCACCACGAGAAGAACACCAA...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCAACTTCTCGGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEANFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAACCAGTGGTCCGAGAAGTT...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATATTGGTGGGAGTCATCTaGTTTTCTTTCACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKILVGVI*FSFTAA
Trigger: AGCGGCTGTGAAAGAAAACCAGATGACTCCCACCAA...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 72 bp GTTAAACCTACTGGGGACATAGTTCCCTGGGCTCCTTaGTGTATCTTGGAGTTCATGTCACAAACAACAATA +
Preference number: 4 (lower is better)
Translates to: VKPTGDIVPWAP*CILEFMSQTTI
Trigger: TATTGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTCCCCAGTAGGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACATCTTCATACAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYIFIQL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTGTATGAAGAT...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAATCTTCATACAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIIFIQL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTGTATGAAGAT...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATACAGCTGTGCATACTaGGGGAAACCAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERYSCAY*GKPVTL
Trigger: GAGAGTGACTGGTTTCCCCCAGTATGCACAGCTGTA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCATTTCCTCAGGGACCTaGAAGAGCTTCTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAISSGT*KSFLHS
Trigger: TGAGTGCAAGAAGCTCTTCCAGGTCCCTGAGGAAAT...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
3UTR CAA 72 bp ACTGGGGACATAGTTCCCTGGGCTCCTTTGTGTATCTaGGAGTTCATGTCACAAACAACAATATACTATGAA +
Preference number: 4 (lower is better)
Translates to: TGDIVPWAPLCI*EFMSQTTIYYE
Trigger: TTCATAGTATATTGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTCCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR TCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAAAGCTTGGATTTTCCTaGCCCGCAGGGTTCAATCAA +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERKLGFS*PAGFNQ
Trigger: TTGATTGAACCCTGCGGGTCAGGAAAATCCAAGCTT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGACATCCCAGAGGTGTTaGTCCTTCAGAAGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKTSQRC*SFRRRF
Trigger: AAAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGT...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAAGTCGCAAGCTTCCTTaGCTTCAATTTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKISRKLP*LQFVLG
Trigger: TCCTAACACAAATTGAAGCCAAGGAAGCTTGCGACT...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATCCTTAGGACTGTCATaGCTGTTTTCTCTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERSLGLS*LFSLRR
Trigger: CCTACGGAGAGAAAACAGCCATGACAGTCCTAAGGA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAGGATTTCAATCACCTTaGAGTCCAGCAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERGFQSP*SPAGPH
Trigger: ATGTGGACCTGCTGGACTCCAAGGTGATTGAAATCC...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGACTTTACCACTTCGGCTaGACACAAATGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERLYHFG*TQMSKR
Trigger: TCTTTTGGACATTTGTGTGCAGCCGAAGTGGTAAAG...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAAAACTCTGTTTTCTTTaGATTACCCTTGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIKLCFL*ITLGEE
Trigger: TTCTTCTCCAAGGGTAATGCAAAGAAAACAGAGTTT...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR GCA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAAAACTCTGTTTTCTTTaGATTACCCTTGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLSHITTKIQFKGIMRERKLCFL*ITLGEE
Trigger: TTCTTCTCCAAGGGTAATGCAAAGAAAACAGAGTTT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 90 bp GATGACGGAATTGGTTCGGGGCGTAGTGGCATCTCCACTGTGGGCTaGGTGGGTGGGGACGCTGCTGCTGGTGCTGCTGAGGCTTCGGAC +
Preference number: 5 (lower is better)
Translates to: DDGIGSGRSGISTVG*VGGDAAAGAAEASD
Trigger: GTCCGAAGCCTCAGCAGCACCAGCAGCAGCGTCCCCACCCACGCAGCCCACAGTGGAGATGCCACTACGCCCCGAACCAATTCCGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp TTTTTCCAGATAGCATCCAGCGCCCTGGCGGTGGAGTCTCTGATGTaGTCGCTGAAGGACCTCCGCAGCGGGCCTCTCAGGGGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: FFQIASSALAVESLM*SLKDLRSGPLRGRA
Trigger: GGCTCGGCCCCTGAGAGGCCCGCTGCGGAGGTCCTTCAGCGACCACATCAGAGACTCCACCGCCAGGGCGCTGGATGCTATCTGGAAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS CCA 90 bp ACGCTGATGACGGAATTGGTTCGGGGCGTAGTGGCATCTCCACTGTaGGCTGCGTGGGTGGGGACGCTGCTGCTGGTGCTGCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: TLMTELVRGVVASPL*AAWVGTLLLVLLRL
Trigger: AAGCCTCAGCAGCACCAGCAGCAGCGTCCCCACCCACGCAGCCCACAGTGGAGATGCCACTACGCCCCGAACCAATTCCGTCATCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp CTGCTGCTGGTGCTGCTGAGGCTTCGGACAGAGGCCACCTCCTGGTaGTCGCTGAGGTCTGTCAGCATGCTTTCGTGGCTTGTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: LLLVLLRLRTEATSW*SLRSVSMLSWLVAL
Trigger: AAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTCAGCGAGCACCAGGAGGTGGCCTCTGTCCGAAGCCTCAGCAGCACCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp GAGGCCACCTCCTGGTGCTCGCTGAGGTCTGTCAGCATGCTTTCGTaGCTTGTGGCGCTTTGCAAACGAGAGTTGTCTGGGGACCCAGGG +
Preference number: 5 (lower is better)
Translates to: EATSWCSLRSVSMLS*LVALCKRELSGDPG
Trigger: CCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTCAGCGAGCACCAGGAGGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp AGAATGGGAGCACTGATGATCAACCCCAGCTTGGAAGGCGCCTTGTaGTTGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTCTCCATGCGT +
Preference number: 5 (lower is better)
Translates to: RMGALMINPSLEGAL*LLWWEPLSFRLSMR
Trigger: ACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAGTGCTCCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp GGGACCACCGCTTGCTGTCCCTCTGGAAAGTCCACTTGCCGCTTATaGCGCAAGGCTCATCTTCATCCGAATCCTCACTTCGCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: GTTACCPSGKSTCRL*RKAHLHPNPHFASG
Trigger: ACCGGAAGCGAAGTGAGGATTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGAAGGCGGGACCACCGCTaGCTGTCCCTCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGRRDHR*LSLWKV
Trigger: GACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCT...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACCTGTGGTGGGAGCCCTaGAGCTTCAGGCTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHLWWEP*SFRLSM
Trigger: CATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAG...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACAGCTTGGAAGGCGCCTaGTGCTTGCTGTGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHSLEGA*CLLWWE
Trigger: CTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCT...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 90 bp CTTCAAGGCGGGACCACCGCTTGCTGTCCCTCTGGAAAGTCCACTTaGCGCTTATGGCGCAAGGCTCATCTTCATCCGAATCCTCACTTC +
Preference number: 5 (lower is better)
Translates to: LQGGTTACCPSGKST*RLWRKAHLHPNPHF
Trigger: GAAGTGAGGATTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp GCTTTGGGGAAAAGACGTCAAACTCTTCAAGGCGGGACCACCGCTTaGTGTCCCTCTGGAAAGTCCACTTGCCGCTTATGGCGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: ALGKRRQTLQGGTTA*CPSGKSTCRLWRKA
Trigger: AGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTTTTCCCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp TCCAGGTCCTCAATACGACGTAGTCCCGCGCAGGGTGGGGCGCCATaGTGTTTTGGACGTATTGGTAGATTTCAGTCTGGCTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SRSSIRRSPAQGGAP*CFGRIGRFQSGCPG
Trigger: TCCTGGACAGCCAGACTGAAATCTACCAATACGTCCAAAACAGCATGGCGCCCCACCCTGCGCGGGACTACGTCGTATTGAGGACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp CTGTCATGGCTGTTTTCTCTCCGTAGGCTGAGATGGCCAGGGCCATaGAAGCTTCCGGTCCTCCAGTTCACAGAACTGTTTCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: LSWLFSLRRLRWPGP*KLPVLQFTELFPEG
Trigger: TCCCTCGGGAAACAGTTCTGTGAACTGGAGGACCGGAAGCTTCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAAACAGCCATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACGGCTCATTGAGGGAGTaGCCTGTGCTGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHGSLRE*PVLSRS
Trigger: TGACCTGGACAGCACAGGCAACTCCCTCAATGAGCC...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCGGCTCTTCGGGCTCATaGAGGGAGTTGCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SASFAEHLSVPDTASHPFGSSGS*RELPVL
Trigger: CAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGCC...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 90 bp TGCTCGCTGAGGTCTGTCAGCATGCTTTCGTGGCTTGTGGCGCTTTaGAAACGAGAGTTGTCTGGGGACCCAGGGATTGGATCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CSLRSVSMLSWLVAL*KRELSGDPGIGSCF
Trigger: AAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTCAGCGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp TCCACACAGTTCAGCTGCTTCAGCTTTGCCTCATCCATACCCTCCTaGAGAATGGGAGCACTGATGATCAACCCCAGCTTGGAAGGCGCC +
Preference number: 5 (lower is better)
Translates to: STQFSCFSFASSIPS*RMGALMINPSLEGA
Trigger: GGCGCCTTCCAAGCTGGGGTTGATCATCAGTGCTCCCATTCTGCAGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGAACTGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp ATTTCAATCACCTTGGAGTCCAGCAGGTCCACATCCCAGAGGTGTTaGTCCTTCAGAAGGCGCTTTAAGATCTCCTCGGGTGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: ISITLESSRSTSQRC*SFRRRFKISSGAAG
Trigger: CCCCGCTGCACCCGAGGAGATCTTAAAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGTGGACCTGCTGGACTCCAAGGTGATTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp AAGACGTCAAACTCTTCAAGGCGGGACCACCGCTTGCTGTCCCTCTaGAAAGTCCACTTGCCGCTTATGGCGCAAGGCTCATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: KTSNSSRRDHRLLSL*KVHLPLMAQGSSSS
Trigger: GGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp AGCTCCTTAGGACTGTCATGGCTGTTTTCTCTCCGTAGGCTGAGATaGCCAGGGCCATGGAAGCTTCCGGTCCTCCAGTTCACAGAACTG +
Preference number: 5 (lower is better)
Translates to: SSLGLSWLFSLRRLR*PGPWKLPVLQFTEL
Trigger: CAGTTCTGTGAACTGGAGGACCGGAAGCTTCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAAACAGCCATGACAGTCCTAAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp TGCATTACCCTTGGAGAAGAATTCTCTCGCTTCAGGGTGTTGAGGTaGAAGAGGGACGGAGCTAGGCACACAGCCAGGTTGGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: CITLGEEFSRFRVLR*KRDGARHTARLVGV
Trigger: GACTCCCACCAACCTGGCTGTGTGCCTAGCTCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAGAGAATTCTTCTCCAAGGGTAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCCTCTGGAAAGTCCACTaGCCGCTTATGGCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: SASFAEHLSVPDTASHPFLWKVH*PLMAQG
Trigger: GCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAG...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACGGCACGTTGATGTGGTaGCCATTGAGGGCTGAGATC +
Preference number: 5 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHGTLMW*PLRAEI
Trigger: GATCTCAGCCCTCAATGGCAACCACATCAACGTGCC...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGGGCCGCCTTGATGGCTaGGAGGCGCTGGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEGRLDG*EALVLG
Trigger: CCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGCC...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS TCA 90 bp CTGAGTCCGAGTCTCCCTCGTCGGAAAACTTCTCGGACCACTGGTTaGCTATCCGCTGCATCCCCTTCACGTGGTAGAGAATGTCATCCA +
Preference number: 5 (lower is better)
Translates to: LSPSLPRRKTSRTTG*LSAASPSRGRECHP
Trigger: TGGATGACATTCTCTACCACGTGAAGGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGAAGTTTTCCGACGAGGGAGACTCGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp TTGCAAACGAGAGTTGTCTGGGGACCCAGGGATTGGATCCTGCTTTaGGGAAAAGACGTCAAACTCTTCAAGGCGGGACCACCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LQTRVVWGPRDWILL*GKDVKLFKAGPPLA
Trigger: AGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATAGGCTCTCCATGCGTTaGAGCAGGCTCCGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHRLSMR*SRLRVF
Trigger: GAAGACGCGGAGCCTGCTCAAACGCATGGAGAGCCT...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS CCA 90 bp CAGCATGCTTTCGTGGCTTGTGGCGCTTTGCAAACGAGAGTTGTCTaGGGACCCAGGGATTGGATCCTGCTTTGGGGAAAAGACGTCAAA +
Preference number: 5 (lower is better)
Translates to: QHAFVACGALQTRVV*GPRDWILLWGKDVK
Trigger: TTTGACGTCTTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp CGTTTGAGCAGGCTCCGCGTCTTCGACTTGGTGTTCTTCTCGTGGTaGCCTTTCATGCTAAAACTGAAGCTGGACAGTTCCTTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RLSRLRVFDLVFFSW*PFMLKLKLDSSLGD
Trigger: GTCTCCCAAGGAACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp GTGGAGTTAGACACGCTCCTTTTCCGTACCATGGGCACGTTGATGTaGTTGCCATTGAGGGCTGAGATCTCCACACAGTTCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VELDTLLFRTMGTLM*LPLRAEISTQFSCF
Trigger: GAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGGAGCGTGTCTAACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp AGAGAGCTGGAAGAATTGCGTCTCTTCAGCTCCTTAGGACTGTCATaGCTGTTTTCTCTCCGTAGGCTGAGATGGCCAGGGCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: RELEELRLFSSLGLS*LFSLRRLRWPGPWK
Trigger: CTTCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAAACAGCCATGACAGTCCTAAGGAGCTGAAGAGACGCAATTCTTCCAGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACGGCACGTTGATGTGGTaGCCATTGAGGGCTGAGATC +
Preference number: 5 (lower is better)
Translates to: HRSVAVALFLEPLGILSDGTLMW*PLRAEI
Trigger: GATCTCAGCCCTCAATGGCAACCACATCAACGTGCC...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCTTGGTCTGGGGACCAGGTGTATCTGTTTaGGAGATGACGGGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LLLCSWNLWASFLTLVWGPGVSV*EMTGKE
Trigger: CTCCTTGCCCGTCATCTCCAAAACAGATACACCTGG...TCCCCAGACCAAGGTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS TCA 90 bp CCTTTTCCGTACCATGGGCACGTTGATGTGGTTGCCATTGAGGGCTaGGATCTCCACACAGTTCAGCTGCTTCAGCTTTGCCTCATCCAT +
Preference number: 5 (lower is better)
Translates to: PFPYHGHVDVVAIEG*DLHTVQLLQLCLIH
Trigger: ATGGATGAGGCAAAGCTGAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 90 bp ACCTGGAAGAGCTTCTTGCACTCAGCAATCATGTGGGCCAGCCCTTaGGTCGCCGCTAGGTTTTCATTCAGGTCTTTCTGGTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: TWKSFLHSAIMWASP*VAARFSFRSFWSGL
Trigger: CAAACCAGACCAGAAAGACCTGAATGAAAACCTAGCGGCGACTCAAGGGCTGGCCCACATGATTGCTGAGTGCAAGAAGCTCTTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp TTGATGTGGTTGCCATTGAGGGCTGAGATCTCCACACAGTTCAGCTaGTTCAGCTTTGCCTCATCCATACCCTCCTGCAGAATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LMWLPLRAEISTQFS*FSFASSIPSCRMGA
Trigger: TGCTCCCATTCTGCAGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp CATACTGGGGGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTTaGCTTCAATTTGTGTTAGGATCATGGTGTCCGGCTCGTCTCTAC +
Preference number: 5 (lower is better)
Translates to: HTGGNQSLSASRKLP*LQFVLGSWCPARLY
Trigger: GTAGAGACGAGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCCCCCAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS CCA 90 bp ATGCGTTTGAGCAGGCTCCGCGTCTTCGACTTGGTGTTCTTCTCGTaGTGGCCTTTCATGCTAAAACTGAAGCTGGACAGTTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: MRLSRLRVFDLVFFS*WPFMLKLKLDSSLG
Trigger: TCCCAAGGAACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp GGAGAGGAGGCAGTGCTGAGAGCATTCTCTATGTCTTGGTCTAGTTaGTCCAGTTTCATAATGAGCAGCACCATGGAGTCCAGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GEEAVLRAFSMSWSS*SSFIMSSTMESSRV
Trigger: GACACGGCTGGACTCCATGGTGCTGCTCATTATGAAACTGGACCAACTAGACCAAGACATAGAGAATGCTCTCAGCACTGCCTCCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGAAGGCGCCTTGTGCTaGCTGTGGTGGGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTEGALC*LWWEPL
Trigger: CAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTACATGCCCACCCGCTaGTTACAGGTGCTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLYMPTR*LQVLRL
Trigger: GAGCCTCAGCACCTGTAACAAGCGGGTGGGCATGTA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTTCTCGGACCACTGGTaGACTATCCGCTGCATCCCC +
Preference number: 5 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLFSDHW*TIRCIP
Trigger: GGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGAA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCCAGGTGTATCTGTTTaGGAGATGACGGGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: HRSVAVALFLEPLGILSDPGVSV*EMTGKE
Trigger: CTCCTTGCCCGTCATCTCCAAAACAGATACACCTGG...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTCTCGCTTCAGGGTGTaGAGGTGGAAGAGGGACGGA +
Preference number: 5 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLSRFRV*RWKRDG
Trigger: TCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAGA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGAAGGGGCTTCAGCTCTaGTTCAGTGTAGGAGTTACG +
Preference number: 5 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQKGLQL*FSVGVT
Trigger: CGTAACTCCTACACTGAACAAGAGCTGAAGCCCCTT...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCACATCCCAGAGGTGTaGCTCCTTCAGAAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHHIPEV*LLQKAL
Trigger: AAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGTG...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS CCA 90 bp CAGAATCAGTATCCTCATCCGAAATGTGCACTAGTGTTTCTGTGCTaGCCTCGAGCGATAGAAACCGCTCTTCCCCTTCTTGGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: QNQYPHPKCALVFLC*PRAIETALPLLGCH
Trigger: GTGACAGCCAAGAAGGGGAAGAGCGGTTTCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATACTGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp GAGAAAACCTGTCCGAGAGTACCAACTATTCCAGTGGATACATCGGTCCCTCAGCTTTGCAAACGAGAGTaGTCTGGGGACCCAGGGATT +
Preference number: 5 (lower is better)
Translates to: EKTCPRVPTIPVDTSVPQLCKRE*SGDPGI
Trigger: AATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAG...CTGAGGGACCGATGTATCCACTGGAATAGTTGGTACTCTCGGACAGGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGAAGCTGGACAGTTCCTaGGGAGACGGCAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKEKLDSS*GDGRLE
Trigger: TTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCTT...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATCGCATCCCTTCAGAGAGCTGGAAGAATaGCGTCTCTTCAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SASFAEHLSVPDTASHPFRELEE*RLFSSL
Trigger: TAAGGAGCTGAAGAGACGCAATTCTTCCAGCTCTCT...GAAGGGATGCGATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS TCA 90 bp ATGGCGCAAGGCTCATCTTCATCCGAATCCTCACTTCGCTTCCGGTaGGGACTGATCTCCAGCTTCATGACTGCACACTTGTTTAGAGTA +
Preference number: 5 (lower is better)
Translates to: MAQGSSSSESSLRFR*GLISSFMTAHLFRV
Trigger: TACTCTAAACAAGTGTGCAGTCATGAAGCTGGAGATCAGTCCTCACCGGAAGCGAAGTGAGGATTCGGATGAAGATGAGCCTTGCGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 90 bp TTCCATCCTTCCCTCCAAGCTGTCGGATGCCAGTCCGTGGTGACATaGTATGTCATACTCATCAGAAATAAAAGGCTGTTCGGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FHPSLQAVGCQSVVT*YVILIRNKRLFGLL
Trigger: CAGCAGACCGAACAGCCTTTTATTTCTGATGAGTATGACATAGCATGTCACCACGGACTGGCATCCGACAGCTTGGAGGGAAGGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 90 bp GATCAGAATCAGTATCCTCATCCGAAATGTGCACTAGTGTTTCTGTaGTGGCCTCGAGCGATAGAAACCGCTCTTCCCCTTCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: DQNQYPHPKCALVFL*WPRAIETALPLLGC
Trigger: ACAGCCAAGAAGGGGAAGAGCGGTTTCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATACTGATTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 90 bp CGTATTGGTAGATTTCAGTCTGGCTGTCCAGGATTTCAATCACCTTaGAGTCCAGCAGGTCCACATCCCAGAGGTGTTGCTCCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RIGRFQSGCPGFQSP*SPAGPHPRGVAPSE
Trigger: TTCTGAAGGAGCAACACCTCTGGGATGTGGACCTGCTGGACTCCAAGGTGATTGAAATCCTGGACAGCCAGACTGAAATCTACCAATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp TCTGACCCACAACAGCGGTCCGGTAGAGAGGCACACTTCTCTTTATaGTCCACATTTAAGGTCGCATCTTTTTCCATCCTTCCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SDPQQRSGREAHFSL*STFKVASFSILPSK
Trigger: CTTGGAGGGAAGGATGGAAAAAGATGCGACCTTAAATGTGGACCATAAAGAGAAGTGTGCCTCTCTACCGGACCGCTGTTGTGGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp CATCGTTCCGTTGCTGTTGCTCTGTTCTTGGAACCTCTGGGCATCCTTTCTGACCAGTCGCAAGCTTCCTaGGCTTCAATTTGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: HRSVAVALFLEPLGILSDQSQAS*ASICVR
Trigger: CCTAACACAAATTGAAGCCAAGGAAGCTTGCGACTG...GTCAGAAAGGATGCCCAGAGGTTCCAAGAACAGAGCAACAGCAACGGAACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS-3UTR CAA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGAAGGCGCCTTGTGCTaGCTGTGGTGGGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYEGALC*LWWEPL
Trigger: CAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCGTTCCGTTGCTGTTGCTCTCAGCTGCTTCAGCTTaGCCTCATCCATACCCTCCT +
Preference number: 5 (lower is better)
Translates to: DSSVTFPLLLSIVPLLLLSAASA*PHPYPP
Trigger: AGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGA...GAGCAACAGCAACGGAACGATGCTTAGAAGCAAAGGAAAGGTCACTGATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTATTGATGTGGTTGCCATaGAGGGCTGAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVLMWLP*RAEIST
Trigger: TGTGGAGATCTCAGCCCTCAATGGCAACCACATCAA...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp ACACCAGTTCTTGGAAAGTTCCGTGCTCTGAATTCTCTCCTCTGGCCAGACGTAATCCTTTTCATGAACTaGGGCACAGCCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TPVLGKFRALNSLLWPDVILFMN*GTAQLK
Trigger: CTTCAGCTGGGCTGTGCCCAAGTTCATGAAAAGGAT...TACGTCTGGCCAGAGGAGAGAATTCAGAGCACGGAACTTTCCAAGAACTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCATCCTTTTCATGAACTaGGGCACAGCCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSILFMN*GTAQLK
Trigger: CTTCAGCTGGGCTGTGCCCAAGTTCATGAAAAGGAT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCAAGGGGCTTCAGCTCTaGTTCAGTGTAGGAGTTACG +
Preference number: 5 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSKGLQL*FSVGVT
Trigger: CGTAACTCCTACACTGAACAAGAGCTGAAGCCCCTT...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GTGGGAAAGAGACCTCTTGCGGACTCATCAGTGACCTTTCCTTTGCTTCTAAGCGGGCGCCATGCTGTTTaGGACGTATTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: VGKRPLADSSVTFPLLLSGRHAV*DVLVDF
Trigger: GAAATCTACCAATACGTCCAAAACAGCATGGCGCCC...GCTTAGAAGCAAAGGAAAGGTCACTGATGAGTCCGCAAGAGGTCTCTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AACCTGGTAGATCAGCATCCTTTGCGGAACATCTCAGTGTGCCAGACACTGCATGGGCGCCATGCTGTTTaGGACGTATTGGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: NLVDQHPLRNISVCQTLHGRHAV*DVLVDF
Trigger: GAAATCTACCAATACGTCCAAAACAGCATGGCGCCC...ATGCAGTGTCTGGCACACTGAGATGTTCCGCAAAGGATGCTGATCTACCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 90 bp AAGACAGATTCACCTGTGTCTGATTTACTGCCATACTGTCTGTTCTaGTTTCAGATCCTGATTCCAGATCAGGGACATGCCGCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: KTDSPVSDLLPYCLF*FQILIPDQGHAAAG
Trigger: ACCTGCGGCGGCATGTCCCTGATCTGGAATCAGGATCTGAAAGCAGAACAGACAGTATGGCAGTAAATCAGACACAGGTGAATCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 90 bp GCAATATCAATAGGGAACAGTAGATCTTCATACAGCTGTGCATACTaGGGGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: AISIGNSRSSYSCAY*GKPVTLSQSQASLA
Trigger: AGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCCCCCAGTATGCACAGCTGTATGAAGATCTACTGTTCCCTATTGATATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 90 bp TGGGTTTGGTTCCAGAATTGCTCCCTGGAGTGGATGATGGATCGGTaGACTCTGAAGACAGATTCACCTGTGTCTGATTTACTGCCATAC +
Preference number: 5 (lower is better)
Translates to: WVWFQNCSLEWMMDR*TLKTDSPVSDLLPY
Trigger: GTATGGCAGTAAATCAGACACAGGTGAATCTGTCTTCAGAGTCCACCGATCCATCATCCACTCCAGGGAGCAATTCTGGAACCAAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAAAGCTGGACAGTTCCTaGGGAGACGGCAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKKLDSS*GDGRLE
Trigger: TTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCTT...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAAGCTTGGAAGGCGCCTaGTGCTTGCTGTGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PCAVCFSLRLLSHITTKISLEGA*CLLWWE
Trigger: CTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCT...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAGGCTCATTGAGGGAGTaGCCTGTGCTGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKGSLRE*PVLSRS
Trigger: TGACCTGGACAGCACAGGCAACTCCCTCAATGAGCC...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGGCTCTTCGGGCTCATaGAGGGAGTTGCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYGSSGS*RELPVL
Trigger: CAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGCC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGGGCCGCCTTGATGGCTaGGAGGCGCTGGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKGRLDG*EALVLG
Trigger: CCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGCC...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTGCATCGCATCCCTTCATCCGTGCCACTCAGCCAGCAACACACACATTCACACCAAACTCTGTTTTCTTaGCATTACCCTTGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LHRIPSSVPLSQQHTHSHQTLFS*HYPWRR
Trigger: TCTTCTCCAAGGGTAATGCAAAGAAAACAGAGTTTG...GTGTGAATGTGTGTGTTGCTGGCTGAGTGGCACGGATGAAGGGATGCGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS TCA 90 bp TCTTTTTCCATCCTTCCCTCCAAGCTGTCGGATGCCAGTCCGTGGTaGCATGCTATGTCATACTCATCAGAAATAAAAGGCTGTTCGGTC +
Preference number: 5 (lower is better)
Translates to: SFSILPSKLSDASPW*HAMSYSSEIKGCSV
Trigger: GACCGAACAGCCTTTTATTTCTGATGAGTATGACATAGCATGTCACCACGGACTGGCATCCGACAGCTTGGAGGGAAGGATGGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 90 bp CATGCTATGTCATACTCATCAGAAATAAAAGGCTGTTCGGTCTGCTaGGTCACGTGCTCTTCCCAGCTCCTCTTTCTGATAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: HAMSYSSEIKGCSVC*VTCSSQLLFLIATD
Trigger: GTCTGTAGCTATCAGAAAGAGGAGCTGGGAAGAGCACGTGACCCAGCAGACCGAACAGCCTTTTATTTCTGATGAGTATGACATAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACCTCTGGAAAGTCCACTaGCCGCTTATGGCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYLWKVH*PLMAQG
Trigger: GCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAG...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAAGGCGGGACCACCGCTaGCTGTCCCTCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLSHITTKIQFKGIMRERRRDHR*LSLWKV
Trigger: GACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACATCAGCTGCTTCAGCTTaGCCTCATCCATACCCTCCT +
Preference number: 5 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTSAASA*PHPYPP
Trigger: AGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGA...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACGTACCATGGGCACGTaGATGTGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKRTMGT*MWLPLR
Trigger: CCTCAATGGCAACCACATCAACGTGCCCATGGTACG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACACTGAAGCCGTGCTTGTaGGAAGGCGTGTACTTTTCC +
Preference number: 5 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTLKPCL*EGVYFS
Trigger: GGAAAAGTACACGCCTTCCAACAAGCACGGCTTCAG...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATATCTCGCTTCAGGGTGTaGAGGTGGAAGAGGGACGGA +
Preference number: 5 (lower is better)
Translates to: PCAVCFSLRLLSHITTKISRFRV*RWKRDG
Trigger: TCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAGA...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TCCTTTCTGACCTTGGTCTGGGGAGACTCTCCAGACTTCCTGAACCTTCACCAGCAAACTCTGTTTTCTTaGCATTACCCTTGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SFLTLVWGDSPDFLNLHQQTLFS*HYPWRR
Trigger: TCTTCTCCAAGGGTAATGCAAAGAAAACAGAGTTTG...CTGGTGAAGGTTCAGGAAGTCTGGAGAGTCTCCCCAGACCAAGGTCAGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACACATCCCAGAGGTGTaGCTCCTTCAGAAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKHIPEV*LLQKAL
Trigger: AAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGTG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAAGGCTCTCCATGCGTTaGAGCAGGCTCCGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLSHITTKIQFKGIMRERRLSMR*SRLRVF
Trigger: GAAGACGCGGAGCCTGCTCAAACGCATGGAGAGCCT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATAATGATCAACCCCAGCTaGGAAGGCGCCTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PCAVCFSLRLLSHITTKIMINPS*EGALCL
Trigger: CAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCAT...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACCGTACCATGGGCACGTaGATGTGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYRTMGT*MWLPLR
Trigger: CCTCAATGGCAACCACATCAACGTGCCCATGGTACG...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CTCTGGCCAGACGTAGGTAATCTCTTCAACAGGAAAGTCAAAAGTGGGAAAGAGAGAGAGCTGGAAGAATaGCGTCTCTTCAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LWPDVGNLFNRKVKSGKERELEE*RLFSSL
Trigger: TAAGGAGCTGAAGAGACGCAATTCTTCCAGCTCTCT...CTCTTTCCCACTTTTGACTTTCCTGTTGAAGAGATTACCTACGTCTGGCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACTGAAGCCGTGCTTGTaGGAAGGCGTGTACTTTTCC +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKLKPCL*EGVYFS
Trigger: GGAAAAGTACACGCCTTCCAACAAGCACGGCTTCAG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp CCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAAATACTTTGCAAACGAGAGTaGTCTGGGGACCCAGGGATT +
Preference number: 5 (lower is better)
Translates to: PCAVCFSLRLLSHITTKILCKRE*SGDPGI
Trigger: AATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAG...TATTTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATTCTCGGACCACTGGTaGACTATCCGCTGCATCCCC +
Preference number: 5 (lower is better)
Translates to: LLSHITTKIQFKGIMRERFSDHW*TIRCIP
Trigger: GGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGAA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AGACCCTGCGCTGTTTGCTTTTCACTGAGATTACTATCCCACATTACCACTAAACAGTCGCAAGCTTCCTaGGCTTCAATTTCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: RPCAVCFSLRLLSHITTKQSQAS*ASISAS
Trigger: GCTAGCAGAAATTGAAGCCAAGGAAGCTTGCGACTG...TTTAGTGGTAATGTGGGATAGTAATCTCAGTGAAAAGCAAACAGCGCAGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS GCA 90 bp TCATTGATAAGGTTTAGATCAGAATCAGTATCCTCATCCGAAATGTaGACTAGTGTTTCTGTGCTGGCCTCGAGCGATAGAAACCGCTCT +
Preference number: 5 (lower is better)
Translates to: SLIRFRSESVSSSEM*TSVSVLASSDRNRS
Trigger: AGAGCGGTTTCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATACTGATTCTGATCTAAACCTTATCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 90 bp GCTTTTATTTATAGCCTCAACATCTTTCCTTTCTCCACTTCCTTCTaGTGGAGACATATCAGCCTTACCAGCCATCCTCCAGGTGTTATG +
Preference number: 5 (lower is better)
Translates to: AFIYSLNIFPFSTSF*WRHISLTSHPPGVM
Trigger: CATAACACCTGGAGGATGGCTGGTAAGGCTGATATGTCTCCAGCAGAAGGAAGTGGAGAAAGGAAAGATGTTGAGGCTATAAATAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGAATGATCAACCCCAGCTaGGAAGGCGCCTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LLSHITTKIQFKGIMRERMINPS*EGALCL
Trigger: CAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCAT...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGTACATGCCCACCCGCTaGTTACAGGTGCTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKYMPTR*LQVLRL
Trigger: GAGCCTCAGCACCTGTAACAAGCGGGTGGGCATGTA...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp GACATAGTTCCCTGGGCTCCTTTGTGTATCTTGGAGTTCATGTCACAAACAACAGCTGTTTTGGACGTATaGGTAGATTTCAGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: DIVPWAPLCILEFMSQTTAVLDV*VDFSLA
Trigger: AGCCAGACTGAAATCTACCAATACGTCCAAAACAGC...TGTTGTTTGTGACATGAACTCCAAGATACACAAAGGAGCCCAGGGAACTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS CCA 90 bp TTTATTTATAGCCTCAACATCTTTCCTTTCTCCACTTCCTTCTGCTaGAGACATATCAGCCTTACCAGCCATCCTCCAGGTGTTATGAGA +
Preference number: 5 (lower is better)
Translates to: FIYSLNIFPFSTSFC*RHISLTSHPPGVMR
Trigger: TCTCATAACACCTGGAGGATGGCTGGTAAGGCTGATATGTCTCCAGCAGAAGGAAGTGGAGAAAGGAAAGATGTTGAGGCTATAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp ATGTTTCTCAATAGAACGGTATATACAGCATACAATCTTACAGATCCGGAAGCCAAGGTTTCGGAGAGTTaGTTCGTCATGAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: MFLNRTVYTAYNLTDPEAKVSES*FVMRGS
Trigger: TGAGCCCCTCATGACGAACAAACTCTCCGAAACCTT...GGCTTCCGGATCTGTAAGATTGTATGCTGTATATACCGTTCTATTGAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS TCA 90 bp TTATTTTCCTGGTCATCTTTAGGGAAGTCAGATTTCCTGCATTGTTaGGTGATGACTGCAGAATCAAGCAGTTGTGTCTCAGGTGTGACA +
Preference number: 5 (lower is better)
Translates to: LFSWSSLGKSDFLHC*VMTAESSSCVSGVT
Trigger: TGTCACACCTGAGACACAACTGCTTGATTCTGCAGTCATCACTCAACAATGCAGGAAATCTGACTTCCCTAAAGATGACCAGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp TTACTATCCCACATTACCACTAAAATACAGTTCAAGGGCATAATGAGAGAGAGATTGATGTGGTTGCCATaGAGGGCTGAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: LLSHITTKIQFKGIMRERLMWLP*RAEIST
Trigger: TGTGGAGATCTCAGCCCTCAATGGCAACCACATCAA...TCTCTCTCTCATTATGCCCTTGAACTGTATTTTAGTGGTAATGTGGGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS-3UTR CAA 90 bp AACTGTATTCACTTAAAGTGTATTTACAATGTGGGGAGGGGAACCTTGAGGTACGCTGTTTTGGACGTATaGGTAGATTTCAGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: NCIHLKCIYNVGRGTLRYAVLDV*VDFSLA
Trigger: AGCCAGACTGAAATCTACCAATACGTCCAAAACAGC...GTACCTCAAGGTTCCCCTCCCCACATTGTAAATACACTTTAAGTGAATACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 90 bp GAGCCTGCTCCTTTGACACTATCTTGGCTGTCTCTTTCATGTCTTTaGGGAGTTAAAATCTGTGAGTCATTGATAAGGTTTAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: EPAPLTLSWLSLSCL*GVKICESLIRFRSE
Trigger: TTCTGATCTAAACCTTATCAATGACTCACAGATTTTAACTCCGCAAAGACATGAAAGAGACAGCCAAGATAGTGTCAAAGGAGCAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 90 bp AGTAGTAGTGTCTTAGGAGTGACGTCATCTTCCGTATTCAAAGACTaGAATGTATTTCCTATGGGCACATCTTTTGTTTCATCTGCACTC +
Preference number: 5 (lower is better)
Translates to: SSSVLGVTSSSVFKD*NVFPMGTSFVSSAL
Trigger: GAGTGCAGATGAAACAAAAGATGTGCCCATAGGAAATACATTCCAGTCTTTGAATACGGAAGATGACGTCACTCCTAAGACACTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS-3UTR CAA 90 bp TTACTAATACTGTCTCGAGTCGATCCTTACCATTACAGTAAAACCTGTATAAAGAAGGTTTCGGAGAGTTaGTTCGTCATGAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LLILSRVDPYHYSKTCIKKVSES*FVMRGS
Trigger: TGAGCCCCTCATGACGAACAAACTCTCCGAAACCTT...CTTTATACAGGTTTTACTGTAATGGTAAGGATCGACTCGAGACAGTATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
CDS GCA 72 bp ATTGGTTCGGGGCGTAGTGGCATCTCCACTGTGGGCTaGGTGGGTGGGGACGCTGCTGCTGGTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: IGSGRSGISTVG*VGGDAAAGAAE
Trigger: CTCAGCAGCACCAGCAGCAGCGTCCCCACCCACGCAGCCCACAGTGGAGATGCCACTACGCCCCGAACCAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp ATAGCATCCAGCGCCCTGGCGGTGGAGTCTCTGATGTaGTCGCTGAAGGACCTCCGCAGCGGGCCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: IASSALAVESLM*SLKDLRSGPLR
Trigger: CCTGAGAGGCCCGCTGCGGAGGTCCTTCAGCGACCACATCAGAGACTCCACCGCCAGGGCGCTGGATGCTAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS CCA 72 bp CTGGTGCTGCTGAGGCTTCGGACAGAGGCCACCTCCTaGTGCTCGCTGAGGTCTGTCAGCATGCTTTCGTGG +
Preference number: 6 (lower is better)
Translates to: LVLLRLRTEATS*CSLRSVSMLSW
Trigger: CCACGAAAGCATGCTGACAGACCTCAGCGAGCACCAGGAGGTGGCCTCTGTCCGAAGCCTCAGCAGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GCCACAGACTGGCAGTTAATCTGCAGTGACACGGAGTaGAGGCTCGGCCGGTGGGAGCTCTGGAAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: ATDWQLICSDTE*RLGRWELWKLC
Trigger: GCACAGCTTCCAGAGCTCCCACCGGCCGAGCCTCAACTCCGTGTCACTGCAGATTAACTGCCAGTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp TCCCGGTTCTCGTCGGGCAGGAGCATAATGGCCGCCTaGATGGCTTGGAGGCGCTGGTCCTTGGGAACATAC +
Preference number: 6 (lower is better)
Translates to: SRFSSGRSIMAA*MAWRRWSLGTY
Trigger: GTATGTTCCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGCCATTATGCTCCTGCCCGACGAGAACCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp GCACTGATGATCAACCCCAGCTTGGAAGGCGCCTTGTaGTTGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: ALMINPSLEGAL*LLWWEPLSFRL
Trigger: GAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp TTGGAAGGCGCCTTGTGCTTGCTGTGGTGGGAGCCCTaGAGCTTCAGGCTCTCCATGCGTTTGAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LEGALCLLWWEP*SFRLSMRLSRL
Trigger: GAGCCTGCTCAAACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CTGATGATCAACCCCAGCTTGGAAGGCGCCTTGTGCTaGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LMINPSLEGALC*LWWEPLSFRLS
Trigger: GGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp AATGGGTCGAAGCCCTCTAGATACATGCCCACCCGCTaGTTACAGGTGCTGAGGCTCCGGGTCCTGGTGACC +
Preference number: 6 (lower is better)
Translates to: NGSKPSRYMPTR*LQVLRLRVLVT
Trigger: GGTCACCAGGACCCGGAGCCTCAGCACCTGTAACAAGCGGGTGGGCATGTATCTAGAGGGCTTCGACCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GGGATATCAGTGGGCTCTTCGGGCTCATTGAGGGAGTaGCCTGTGCTGTCCAGGTCACTGGGTGTCCTTCGG +
Preference number: 6 (lower is better)
Translates to: GISVGSSGSLRE*PVLSRSLGVLR
Trigger: CCGAAGGACACCCAGTGACCTGGACAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGCCCACTGATATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TCATTGCCTACAAAGTGTCCGGAGGAGCAGACGCTGATGACGGAATaGGTTCGGGGCGTAGTGGCATCTCCACTGTGGGCTGCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: SLPTKCPEEQTLMTE*VRGVVASPLWAAWV
Trigger: CACCCACGCAGCCCACAGTGGAGATGCCACTACGCCCCGAACCAATTCCGTCATCAGCGTCTGCTCCTCCGGACACTTTGTAGGCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TGCTTGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTCTCCATGCGTTaGAGCAGGCTCCGCGTCTTCGACTTGGTGTTCTTCTCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CLLWWEPLSFRLSMR*SRLRVFDLVFFSWW
Trigger: CCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp CTCCCGGTTCTCGTCGGGCAGGAGCATAATGGCCGCCTTGATGGCTaGGAGGCGCTGGTCCTTGGGAACATACTGGTAGATCTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LPVLVGQEHNGRLDG*EALVLGNILVDLQE
Trigger: TTCCTGCAGATCTACCAGTATGTTCCCAAGGACCAGCGCCTCCAAGCCATCAAGGCGGCCATTATGCTCCTGCCCGACGAGAACCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp ATGGGAGCACTGATGATCAACCCCAGCTTGGAAGGCGCCTTGTGCTaGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTCTCCATGCGTTTG +
Preference number: 6 (lower is better)
Translates to: MGALMINPSLEGALC*LWWEPLSFRLSMRL
Trigger: CAAACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAGTGCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TGCAGAATGGGAGCACTGATGATCAACCCCAGCTTGGAAGGCGCCTaGTGCTTGCTGTGGTGGGAGCCCTTGAGCTTCAGGCTCTCCATG +
Preference number: 6 (lower is better)
Translates to: CRMGALMINPSLEGA*CLLWWEPLSFRLSM
Trigger: CATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAGTGCTCCCATTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TCCATACCCTCCTGCAGAATGGGAGCACTGATGATCAACCCCAGCTaGGAAGGCGCCTTGTGCTTGCTGTGGTGGGAGCCCTTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SIPSCRMGALMINPS*EGALCLLWWEPLSF
Trigger: GAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGCGCCTTCCAAGCTGGGGTTGATCATCAGTGCTCCCATTCTGCAGGAGGGTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp CTTCTTTCCGGGATATCAGTGGGCTCTTCGGGCTCATTGAGGGAGTaGCCTGTGCTGTCCAGGTCACTGGGTGTCCTTCGGTCATGGTCC +
Preference number: 6 (lower is better)
Translates to: LLSGISVGSSGSLRE*PVLSRSLGVLRSWS
Trigger: GGACCATGACCGAAGGACACCCAGTGACCTGGACAGCACAGGCAACTCCCTCAATGAGCCCGAAGAGCCCACTGATATCCCGGAAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp AACTCTTCAAGGCGGGACCACCGCTTGCTGTCCCTCTaGAAAGTCCACTTGCCGCTTATGGCGCAAGGCTCA +
Preference number: 6 (lower is better)
Translates to: NSSRRDHRLLSL*KVHLPLMAQGS
Trigger: TGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CGGGACCACCGCTTGCTGTCCCTCTGGAAAGTCCACTaGCCGCTTATGGCGCAAGGCTCATCTTCATCCGAA +
Preference number: 6 (lower is better)
Translates to: RDHRLLSLWKVH*PLMAQGSSSSE
Trigger: TTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp ACAAAGTGTCCGGAGGAGCAGACGCTGATGACGGAATaGGTTCGGGGCGTAGTGGCATCTCCACTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: TKCPEEQTLMTE*VRGVVASPLWA
Trigger: AGCCCACAGTGGAGATGCCACTACGCCCCGAACCAATTCCGTCATCAGCGTCTGCTCCTCCGGACACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp TGGTGGGAGCCCTTGAGCTTCAGGCTCTCCATGCGTTaGAGCAGGCTCCGCGTCTTCGACTTGGTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: WWEPLSFRLSMR*SRLRVFDLVFF
Trigger: GAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TGCTTTGGGGAAAAGACGTCAAACTCTTCAAGGCGGGACCACCGCTaGCTGTCCCTCTGGAAAGTCCACTTGCCGCTTATGGCGCAAGGC +
Preference number: 6 (lower is better)
Translates to: CFGEKTSNSSRRDHR*LSLWKVHLPLMAQG
Trigger: GCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTTTTCCCCAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp GTGCTCGCTGAGGTCTGTCAGCATGCTTTCGTGGCTTGTGGCGCTTaGCAAACGAGAGTTGTCTGGGGACCCAGGGATTGGATCCTGCTT +
Preference number: 6 (lower is better)
Translates to: VLAEVCQHAFVACGA*QTRVVWGPRDWILL
Trigger: AAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTCAGCGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp CACTGGGTGTCCTTCGGTCATGGTCCACATCCAGGTGTATCTGTTTaGGAGATGACGGGCAAGGAGAGACAGAGTCCAGGGCTGAGTCCG +
Preference number: 6 (lower is better)
Translates to: HWVSFGHGPHPGVSV*EMTGKERQSPGLSP
Trigger: CGGACTCAGCCCTGGACTCTGTCTCTCCTTGCCCGTCATCTCCAAAACAGATACACCTGGATGTGGACCATGACCGAAGGACACCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp GGGACCACCGCTTGCTGTCCCTCTGGAAAGTCCACTTaGCGCTTATGGCGCAAGGCTCATCTTCATCCGAAT +
Preference number: 6 (lower is better)
Translates to: GTTACCPSGKST*RLWRKAHLHPN
Trigger: ATTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp GTTCTGCTTTCAGATCCTGATTCCAGATCAGGGACATaGCGCCGCAGGTTCGTTGGGGTGCTGGATGGAGAG +
Preference number: 6 (lower is better)
Translates to: VLLSDPDSRSGT*RRRFVGVLDGE
Trigger: CTCTCCATCCAGCACCCCAACGAACCTGCGGCGGCATGTCCCTGATCTGGAATCAGGATCTGAAAGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp TCCTGGTGCTCGCTGAGGTCTGTCAGCATGCTTTCGTaGCTTGTGGCGCTTTGCAAACGAGAGTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SWCSLRSVSMLS*LVALCKRELSG
Trigger: CCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTCAGCGAGCACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GGAGCTAGGCACACAGCCAGGTTGGTGGGAGTCATCTaGTTTTCTTTCACAGCCGCTGTGACATCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: GARHTARLVGVI*FSFTAAVTSLR
Trigger: CCTGAGCGATGTCACAGCGGCTGTGAAAGAAAACCAGATGACTCCCACCAACCTGGCTGTGTGCCTAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GAGGTCTGTCAGCATGCTTTCGTGGCTTGTGGCGCTTaGCAAACGAGAGTTGTCTGGGGACCCAGGGATTGG +
Preference number: 6 (lower is better)
Translates to: EVCQHAFVACGA*QTRVVWGPRDW
Trigger: CCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GTGTCCCAAGGCCTCCAGGGTAAGGGGCTTCAGCTCTaGTTCAGTGTAGGAGTTACGGCACCGGCTCATTTC +
Preference number: 6 (lower is better)
Translates to: VSQGLQGKGLQL*FSVGVTAPAHF
Trigger: GAAATGAGCCGGTGCCGTAACTCCTACACTGAACAAGAGCTGAAGCCCCTTACCCTGGAGGCCTTGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GTGCAATGTGACCCATTGGCCTCCCAGGAAAGTCTCTaGTCTCTGACCCACAACAGCGGTCCGGTAGAGAGG +
Preference number: 6 (lower is better)
Translates to: VQCDPLASQESL*SLTHNSGPVER
Trigger: CCTCTCTACCGGACCGCTGTTGTGGGTCAGAGACAAGAGACTTTCCTGGGAGGCCAATGGGTCACATTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp TCTTCAAGGCGGGACCACCGCTTGCTGTCCCTCTGGAAAGTCCACTaGCCGCTTATGGCGCAAGGCTCATCTTCATCCGAATCCTCACTT +
Preference number: 6 (lower is better)
Translates to: SSRRDHRLLSLWKVH*PLMAQGSSSSESSL
Trigger: AAGTGAGGATTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp TCTTCAGCGCTTTCATTCATCTGGCGTAGAGCCTGGATCCGGGATTaGACACCTGACTTCCTGAAGAGCCCGACCTGGTCCAGACAGTGG +
Preference number: 6 (lower is better)
Translates to: SSALSFIWRRAWIRD*TPDFLKSPTWSRQW
Trigger: CCACTGTCTGGACCAGGTCGGGCTCTTCAGGAAGTCAGGTGTCAAATCCCGGATCCAGGCTCTACGCCAGATGAATGAAAGCGCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp ACTATTCAGGTGTCCCAAGGCCTCCAGGGTAAGGGGCTTCAGCTCTaGTTCAGTGTAGGAGTTACGGCACCGGCTCATTTCCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: TIQVSQGLQGKGLQL*FSVGVTAPAHFLRD
Trigger: GTCCCTGAGGAAATGAGCCGGTGCCGTAACTCCTACACTGAACAAGAGCTGAAGCCCCTTACCCTGGAGGCCTTGGGACACCTGAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp CTACCTCCTGTGCAATGTGACCCATTGGCCTCCCAGGAAAGTCTCTaGTCTCTGACCCACAACAGCGGTCCGGTAGAGAGGCACACTTCT +
Preference number: 6 (lower is better)
Translates to: LPPVQCDPLASQESL*SLTHNSGPVERHTS
Trigger: AGAAGTGTGCCTCTCTACCGGACCGCTGTTGTGGGTCAGAGACAAGAGACTTTCCTGGGAGGCCAATGGGTCACATTGCACAGGAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp AGGTCTGTCAGCATGCTTTCGTGGCTTGTGGCGCTTTaGAAACGAGAGTTGTCTGGGGACCCAGGGATTGGA +
Preference number: 6 (lower is better)
Translates to: RSVSMLSWLVAL*KRELSGDPGIG
Trigger: TCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCATGCTGACAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp ACCTTGGAGTCCAGCAGGTCCACATCCCAGAGGTGTTaGTCCTTCAGAAGGCGCTTTAAGATCTCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: TLESSRSTSQRC*SFRRRFKISSG
Trigger: ACCCGAGGAGATCTTAAAGCGCCTTCTGAAGGAGCAACACCTCTGGGATGTGGACCTGCTGGACTCCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp CTTGGAGAAGAATTCTCTCGCTTCAGGGTGTTGAGGTaGAAGAGGGACGGAGCTAGGCACACAGCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LGEEFSRFRVLR*KRDGARHTARL
Trigger: CAACCTGGCTGTGTGCCTAGCTCCGTCCCTCTTCCACCTCAACACCCTGAAGCGAGAGAATTCTTCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp ATGCTTTCGTGGCTTGTGGCGCTTTGCAAACGAGAGTaGTCTGGGGACCCAGGGATTGGATCCTGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: MLSWLVALCKRE*SGDPGIGSCFG
Trigger: CCCAAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GGGCTGAGATCTCCACACAGTTCAGCTGCTTCAGCTTaGCCTCATCCATACCCTCCTGCAGAATGGGAGCAC +
Preference number: 6 (lower is better)
Translates to: GLRSPHSSAASA*PHPYPPAEWEH
Trigger: GTGCTCCCATTCTGCAGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGAACTGTGTGGAGATCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp ATGAACTTGGGCACAGCCCAGCTGAAGCCGTGCTTGTaGGAAGGCGTGTACTTTTCCAGCAGGGCCGTCAAT +
Preference number: 6 (lower is better)
Translates to: MNLGTAQLKPCL*EGVYFSSRAVN
Trigger: ATTGACGGCCCTGCTGGAAAAGTACACGCCTTCCAACAAGCACGGCTTCAGCTGGGCTGTGCCCAAGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CTTTCATTCATCTGGCGTAGAGCCTGGATCCGGGATTaGACACCTGACTTCCTGAAGAGCCCGACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSFIWRRAWIRD*TPDFLKSPTWS
Trigger: GGACCAGGTCGGGCTCTTCAGGAAGTCAGGTGTCAAATCCCGGATCCAGGCTCTACGCCAGATGAATGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CACGGAGCAGCCATGGCTTTGGGTTTGGTTCCAGAATaGCTCCCTGGAGTGGATGATGGATCGGTGGACTCT +
Preference number: 6 (lower is better)
Translates to: HGAAMALGLVPE*LPGVDDGSVDS
Trigger: AGAGTCCACCGATCCATCATCCACTCCAGGGAGCAATTCTGGAACCAAACCCAAAGCCATGGCTGCTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp GACACGCTCCTTTTCCGTACCATGGGCACGTTGATGTGGTTGCCATaGAGGGCTGAGATCTCCACACAGTTCAGCTGCTTCAGCTTTGCC +
Preference number: 6 (lower is better)
Translates to: DTLLFRTMGTLMWLP*RAEISTQFSCFSFA
Trigger: GGCAAAGCTGAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGGAGCGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 72 bp AGTCTCCCTCGTCGGAAAACTTCTCGGACCACTGGTTaGCTATCCGCTGCATCCCCTTCACGTGGTAGAGAA +
Preference number: 6 (lower is better)
Translates to: SLPRRKTSRTTG*LSAASPSRGRE
Trigger: TTCTCTACCACGTGAAGGGGATGCAGCGGATAGTCAACCAGTGGTCCGAGAAGTTTTCCGACGAGGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 72 bp TCTTCCCTTGTTTCCTTTCTCTTGCGCAGTCTGACTTaGTTGTCTACAGTCTCCTGGGTGGTCACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSLVSFLLRSLT*LSTVSWVVTGP
Trigger: GGGCCCCGTGACCACCCAGGAGACTGTAGACAATCAAGTCAGACTGCGCAAGAGAAAGGAAACAAGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp AAAAGACGTCAAACTCTTCAAGGCGGGACCACCGCTTaGTGTCCCTCTGGAAAGTCCACTTGCCGCTTATGG +
Preference number: 6 (lower is better)
Translates to: KRRQTLQGGTTA*CPSGKSTCRLW
Trigger: CCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp TCCAGCAGGGCCGTCAATTTCAGGAGCGAGTATTTCTaGAGCAGGTTCATCTGGGCCACAGACTGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: SSRAVNFRSEYF*SRFIWATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCAGAAATACTCGCTCCTGAAATTGACGGCCCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GCTTGCTGTCCCTCTGGAAAGTCCACTTGCCGCTTATaGCGCAAGGCTCATCTTCATCCGAATCCTCACTTC +
Preference number: 6 (lower is better)
Translates to: ACCPSGKSTCRL*RKAHLHPNPHF
Trigger: GAAGTGAGGATTCGGATGAAGATGAGCCTTGCGCCATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp AGAGTTGTCTGGGGACCCAGGGATTGGATCCTGCTTTaGGGAAAAGACGTCAAACTCTTCAAGGCGGGACCA +
Preference number: 6 (lower is better)
Translates to: RVVWGPRDWILL*GKDVKLFKAGP
Trigger: TGGTCCCGCCTTGAAGAGTTTGACGTCTTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp TTCGTGGCTTGTGGCGCTTTGCAAACGAGAGTTGTCTaGGGACCCAGGGATTGGATCCTGCTTTGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: FVACGALQTRVV*GPRDWILLWGK
Trigger: TTTTCCCCAAAGCAGGATCCAATCCCTGGGTCCCCAGACAACTCTCGTTTGCAAAGCGCCACAAGCCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GACACGCTCCTTTTCCGTACCATGGGCACGTTGATGTaGTTGCCATTGAGGGCTGAGATCTCCACACAGTTC +
Preference number: 6 (lower is better)
Translates to: DTLLFRTMGTLM*LPLRAEISTQF
Trigger: GAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGGAGCGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp CTGTTTTCTCTCCGTAGGCTGAGATGGCCAGGGCCATaGAAGCTTCCGGTCCTCCAGTTCACAGAACTGTTT +
Preference number: 6 (lower is better)
Translates to: LFSLRRLRWPGP*KLPVLQFTELF
Trigger: AAACAGTTCTGTGAACTGGAGGACCGGAAGCTTCCATGGCCCTGGCCATCTCAGCCTACGGAGAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GAAAAGACGTCAAACTCTTCAAGGCGGGACCACCGCTaGCTGTCCCTCTGGAAAGTCCACTTGCCGCTTATG +
Preference number: 6 (lower is better)
Translates to: EKTSNSSRRDHR*LSLWKVHLPLM
Trigger: CATAAGCGGCAAGTGGACTTTCCAGAGGGACAGCAAGCGGTGGTCCCGCCTTGAAGAGTTTGACGTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp TCCTTGGGAGACGGCAGGCTGGAAAAAGAGTCATCATaGCCTACAAAGTGTCCGGAGGAGCAGACGCTGATG +
Preference number: 6 (lower is better)
Translates to: SLGDGRLEKESS*PTKCPEEQTLM
Trigger: CATCAGCGTCTGCTCCTCCGGACACTTTGTAGGCAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp ACGCTCCTTTTCCGTACCATGGGCACGTTGATGTGGTaGCCATTGAGGGCTGAGATCTCCACACAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: TLLFRTMGTLMW*PLRAEISTQFS
Trigger: GCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp TCCTTCGGTCATGGTCCACATCCAGGTGTATCTGTTTaGGAGATGACGGGCAAGGAGAGACAGAGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SFGHGPHPGVSV*EMTGKERQSPG
Trigger: CCCTGGACTCTGTCTCTCCTTGCCCGTCATCTCCAAAACAGATACACCTGGATGTGGACCATGACCGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GGGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTaGGCTTCAATTTCTGCTAGCCGTCTCTCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: GKPVTLSQSQAS*ASISASRLSLV
Trigger: CACCAGAGAGAGACGGCTAGCAGAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS CAA 90 bp CTGGACAGTTCCTTGGGAGACGGCAGGCTGGAAAAAGAGTCATCATaGCCTACAAAGTGTCCGGAGGAGCAGACGCTGATGACGGAATTG +
Preference number: 6 (lower is better)
Translates to: LDSSLGDGRLEKESS*PTKCPEEQTLMTEL
Trigger: CAATTCCGTCATCAGCGTCTGCTCCTCCGGACACTTTGTAGGCAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp AGCTTCAGGCTCTCCATGCGTTTGAGCAGGCTCCGCGTCTTCGACTaGGTGTTCTTCTCGTGGTGGCCTTTCATGCTAAAACTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SFRLSMRLSRLRVFD*VFFSWWPFMLKLKL
Trigger: CAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACGCATGGAGAGCCTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp GAGTTAGACACGCTCCTTTTCCGTACCATGGGCACGTTGATGTGGTaGCCATTGAGGGCTGAGATCTCCACACAGTTCAGCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ELDTLLFRTMGTLMW*PLRAEISTQFSCFS
Trigger: GCTGAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAGGAGCGTGTCTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 72 bp AGCTTCTTGCACTCAGCAATCATGTGGGCCAGCCCTTaGGTCGCCGCTAGGTTTTCATTCAGGTCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: SFLHSAIMWASP*VAARFSFRSFW
Trigger: CCAGAAAGACCTGAATGAAAACCTAGCGGCGACTCAAGGGCTGGCCCACATGATTGCTGAGTGCAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp TTCAGCTGCTTCAGCTTTGCCTCATCCATACCCTCCTaGAGAATGGGAGCACTGATGATCAACCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: FSCFSFASSIPS*RMGALMINPSL
Trigger: CAAGCTGGGGTTGATCATCAGTGCTCCCATTCTGCAGGAGGGTATGGATGAGGCAAAGCTGAAGCAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp AGGCTCCGCGTCTTCGACTTGGTGTTCTTCTCGTGGTaGCCTTTCATGCTAAAACTGAAGCTGGACAGTTCC +
Preference number: 6 (lower is better)
Translates to: RLRVFDLVFFSW*PFMLKLKLDSS
Trigger: GGAACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp AGCAGGCTCCGCGTCTTCGACTTGGTGTTCTTCTCGTaGTGGCCTTTCATGCTAAAACTGAAGCTGGACAGT +
Preference number: 6 (lower is better)
Translates to: SRLRVFDLVFFS*WPFMLKLKLDS
Trigger: ACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GAAGAATTGCGTCTCTTCAGCTCCTTAGGACTGTCATaGCTGTTTTCTCTCCGTAGGCTGAGATGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: EELRLFSSLGLS*LFSLRRLRWPG
Trigger: CCCTGGCCATCTCAGCCTACGGAGAGAAAACAGCCATGACAGTCCTAAGGAGCTGAAGAGACGCAATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTTaGCTTCAATTTCTGCTAGCCGTCTCTCTCTGGTGT +
Preference number: 6 (lower is better)
Translates to: GNQSLSASRKLP*LQFLLAVSLWC
Trigger: ACACCAGAGAGAGACGGCTAGCAGAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098826.10
CDS CAA 72 bp GGGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTaGGCTTCAATTTGTGTTAGGATCATGGTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: GKPVTLSQSQAS*ASICVRIMVSG
Trigger: GCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS CAA 72 bp CTCTCCATGCGTTTGAGCAGGCTCCGCGTCTTCGACTaGGTGTTCTTCTCGTGGTGGCCTTTCATGCTAAAA +
Preference number: 6 (lower is better)
Translates to: LSMRLSRLRVFD*VFFSWWPFMLK
Trigger: TTTTAGCATGAAAGGCCACCACGAGAAGAACACCAAGTCGAAGACGCGGAGCCTGCTCAAACGCATGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CTTTTCCGTACCATGGGCACGTTGATGTGGTTGCCATaGAGGGCTGAGATCTCCACACAGTTCAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LFRTMGTLMWLP*RAEISTQFSCF
Trigger: GAAGCAGCTGAACTGTGTGGAGATCTCAGCCCTCAATGGCAACCACATCAACGTGCCCATGGTACGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp ATCTTCCCTTGTTTCCTTTCTCTTGCGCAGTCTGACTaGATTGTCTACAGTCTCCTGGGTGGTCACGGGGCC +
Preference number: 6 (lower is better)
Translates to: IFPCFLSLAQSD*IVYSLLGGHGA
Trigger: GGCCCCGTGACCACCCAGGAGACTGTAGACAATCAAGTCAGACTGCGCAAGAGAAAGGAAACAAGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp GCATACTGGGGGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTaGGCTTCAATTTGTGTTAGGATCATGGTGTCCGGCTCGTCTCTA +
Preference number: 6 (lower is better)
Translates to: AYWGKPVTLSQSQAS*ASICVRIMVSGSSL
Trigger: TAGAGACGAGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCCCCCAGTATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS CAA 90 bp CTTCTTGGCTGTCACTTTCATCTACCTCCTGTGCAATGTGACCCATaGGCCTCCCAGGAAAGTCTCTTGTCTCTGACCCACAACAGCGGT +
Preference number: 6 (lower is better)
Translates to: LLGCHFHLPPVQCDP*ASQESLLSLTHNSG
Trigger: ACCGCTGTTGTGGGTCAGAGACAAGAGACTTTCCTGGGAGGCCAATGGGTCACATTGCACAGGAGGTAGATGAAAGTGACAGCCAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS TCA 72 bp CTCGATCTTCCCTTGTTTCCTTTCTCTTGCGCAGTCTaGCTTGATTGTCTACAGTCTCCTGGGTGGTCACGG +
Preference number: 6 (lower is better)
Translates to: LDLPLFPFSCAV*LDCLQSPGWSR
Trigger: CCGTGACCACCCAGGAGACTGTAGACAATCAAGTCAGACTGCGCAAGAGAAAGGAAACAAGGGAAGATCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp CAGTATCCTCATCCGAAATGTGCACTAGTGTTTCTGTaGTGGCCTCGAGCGATAGAAACCGCTCTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: QYPHPKCALVFL*WPRAIETALPL
Trigger: AAGGGGAAGAGCGGTTTCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp GGAAACCAGTCACTCTCAGCCAGTCGCAAGCTTCCTTaGCTTCAATTTGTGTTAGGATCATGGTGTCCGGCT +
Preference number: 6 (lower is better)
Translates to: GNQSLSASRKLP*LQFVLGSWCPA
Trigger: AGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGCGACTGGCTGAGAGTGACTGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033923.14
CDS CCA 72 bp AGATTTCAGTCTGGCTGTCCAGGATTTCAATCACCTTaGAGTCCAGCAGGTCCACATCCCAGAGGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: RFQSGCPGFQSP*SPAGPHPRGVA
Trigger: AGCAACACCTCTGGGATGTGGACCTGCTGGACTCCAAGGTGATTGAAATCCTGGACAGCCAGACTGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp AGCCTTACCAGCCATCCTCCAGGTGTTATGAGAATCTTGGCTACTTaGCATGGTGGACAGTGTCTTCATGAAGGAGCCTGCTCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: SLTSHPPGVMRILAT*HGGQCLHEGACSFD
Trigger: GTCAAAGGAGCAGGCTCCTTCATGAAGACACTGTCCACCATGCAAAGTAGCCAAGATTCTCATAACACCTGGAGGATGGCTGGTAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp TCAGAAATAAAAGGCTGTTCGGTCTGCTGGGTCACGTaGTCTTCCCAGCTCCTCTTTCTGATAGCTACAGAC +
Preference number: 6 (lower is better)
Translates to: SEIKGCSVCWVT*SSQLLFLIATD
Trigger: GTCTGTAGCTATCAGAAAGAGGAGCTGGGAAGAGCACGTGACCCAGCAGACCGAACAGCCTTTTATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163663.3
ENSMUST00000179501.2
CDS CCA 72 bp ATAGGGAACAGTAGATCTTCATACAGCTGTGCATACTaGGGGAAACCAGTCACTCTCAGCCAGTCGCAAGCT +
Preference number: 6 (lower is better)
Translates to: IGNSRSSYSCAY*GKPVTLSQSQA
Trigger: AGCTTGCGACTGGCTGAGAGTGACTGGTTTCCCCCAGTATGCACAGCTGTATGAAGATCTACTGTTCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp TTATCTTCAGCGCTTTCATTCATCTGGCGTAGAGCCTaGATCCGGGATTTGACACCTGACTTCCTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LSSALSFIWRRA*IRDLTPDFLKS
Trigger: GCTCTTCAGGAAGTCAGGTGTCAAATCCCGGATCCAGGCTCTACGCCAGATGAATGAAAGCGCTGAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp TATCCTCATCCGAAATGTGCACTAGTGTTTCTGTGCTaGCCTCGAGCGATAGAAACCGCTCTTCCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: YPHPKCALVFLC*PRAIETALPLL
Trigger: AAGAAGGGGAAGAGCGGTTTCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp GGAGAGGAGGCAGTGCTGAGAGCATTCTCTATGTCTTaGTCTAGTTGGTCCAGTTTCATAATGAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: GEEAVLRAFSMS*SSWSSFIMSST
Trigger: GGTGCTGCTCATTATGAAACTGGACCAACTAGACCAAGACATAGAGAATGCTCTCAGCACTGCCTCCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp TGGCTTTGGGTTTGGTTCCAGAATTGCTCCCTGGAGTaGATGATGGATCGGTGGACTCTGAAGACAGATTCA +
Preference number: 6 (lower is better)
Translates to: WLWVWFQNCSLE*MMDRWTLKTDS
Trigger: TGAATCTGTCTTCAGAGTCCACCGATCCATCATCCACTCCAGGGAGCAATTCTGGAACCAAACCCAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp AGCCATCCTCCAGGTGTTATGAGAATCTTGGCTACTTaGCATGGTGGACAGTGTCTTCATGAAGGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SHPPGVMRILAT*HGGQCLHEGAC
Trigger: GCAGGCTCCTTCATGAAGACACTGTCCACCATGCAAAGTAGCCAAGATTCTCATAACACCTGGAGGATGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp TTCTCGTGGTGGCCTTTCATGCTAAAACTGAAGCTGGACAGTTCCTaGGGAGACGGCAGGCTGGAAAAAGAGTCATCATTGCCTACAAAG +
Preference number: 6 (lower is better)
Translates to: FSWWPFMLKLKLDSS*GDGRLEKESSLPTK
Trigger: CTTTGTAGGCAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCACCACGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 72 bp GACATATCAGCCTTACCAGCCATCCTCCAGGTGTTATaGGAATCTTGGCTACTTTGCATGGTGGACAGTGTC +
Preference number: 6 (lower is better)
Translates to: DISALPAILQVL*ESWLLCMVDSV
Trigger: GACACTGTCCACCATGCAAAGTAGCCAAGATTCTCATAACACCTGGAGGATGGCTGGTAAGGCTGATATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp TCCCTCCAAGCTGTCGGATGCCAGTCCGTGGTGACATaGTATGTCATACTCATCAGAAATAAAAGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SLQAVGCQSVVT*YVILIRNKRLF
Trigger: GAACAGCCTTTTATTTCTGATGAGTATGACATAGCATGTCACCACGGACTGGCATCCGACAGCTTGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp CTTGTGATCTTCGGGAATGTAGAACACCGTGTCCTCTaGGTAGCTCTCACGGTTTTTATAGTTCTGCTCCGT +
Preference number: 6 (lower is better)
Translates to: LVIFGNVEHRVL*VALTVFIVLLR
Trigger: ACGGAGCAGAACTATAAAAACCGTGAGAGCTACCCAGAGGACACGGTGTTCTACATTCCCGAAGATCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GCAGTGCTGAGAGCATTCTCTATGTCTTGGTCTAGTTaGTCCAGTTTCATAATGAGCAGCACCATGGAGTCC +
Preference number: 6 (lower is better)
Translates to: AVLRAFSMSWSS*SSFIMSSTMES
Trigger: GGACTCCATGGTGCTGCTCATTATGAAACTGGACCAACTAGACCAAGACATAGAGAATGCTCTCAGCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp TGGCCTTTCATGCTAAAACTGAAGCTGGACAGTTCCTaGGGAGACGGCAGGCTGGAAAAAGAGTCATCATTG +
Preference number: 6 (lower is better)
Translates to: WPFMLKLKLDSS*GDGRLEKESSL
Trigger: CAATGATGACTCTTTTTCCAGCCTGCCGTCTCCCAAGGAACTGTCCAGCTTCAGTTTTAGCATGAAAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 90 bp CAGAGAGCCTCGATGGCGTCTCTGTCCAAGAAGTCATGTTCTCTCTaGACCAGCGCAATATCAATAGGGAACAGTAGATCTTCATACAGC +
Preference number: 6 (lower is better)
Translates to: QRASMASLSKKSCSL*TSAISIGNSRSSYS
Trigger: GCTGTATGAAGATCTACTGTTCCCTATTGATATTGCGCTGGTCAAGAGAGAACATGACTTCTTGGACAGAGACGCCATCGAGGCTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS TCA 72 bp ATCAGCTCTGCACATGTAGGTAAGCTTGGATTTTCCTaGCCCGCAGGGTTCAATCAAATATCTGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: ISSAHVGKLGFS*PAGFNQISGQE
Trigger: CTCCTGTCCAGATATTTGATTGAACCCTGCGGGTCAGGAAAATCCAAGCTTACCTACATGTGCAGAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS GCA 72 bp TATAGCCTCAACATCTTTCCTTTCTCCACTTCCTTCTaGTGGAGACATATCAGCCTTACCAGCCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: YSLNIFPFSTSF*WRHISLTSHPP
Trigger: TGGAGGATGGCTGGTAAGGCTGATATGTCTCCAGCAGAAGGAAGTGGAGAAAGGAAAGATGTTGAGGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp TCACCTGTGTCTGATTTACTGCCATACTGTCTGTTCTaGTTTCAGATCCTGATTCCAGATCAGGGACATGCC +
Preference number: 6 (lower is better)
Translates to: SPVSDLLPYCLF*FQILIPDQGHA
Trigger: GGCATGTCCCTGATCTGGAATCAGGATCTGAAAGCAGAACAGACAGTATGGCAGTAAATCAGACACAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp TCATACTCATCAGAAATAAAAGGCTGTTCGGTCTGCTaGGTCACGTGCTCTTCCCAGCTCCTCTTTCTGATA +
Preference number: 6 (lower is better)
Translates to: SYSSEIKGCSVC*VTCSSQLLFLI
Trigger: TATCAGAAAGAGGAGCTGGGAAGAGCACGTGACCCAGCAGACCGAACAGCCTTTTATTTCTGATGAGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp CAACAGCGGTCCGGTAGAGAGGCACACTTCTCTTTATaGTCCACATTTAAGGTCGCATCTTTTTCCATCCTT +
Preference number: 6 (lower is better)
Translates to: QQRSGREAHFSL*STFKVASFSIL
Trigger: AAGGATGGAAAAAGATGCGACCTTAAATGTGGACCATAAAGAGAAGTGTGCCTCTCTACCGGACCGCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp AGCCTTACCAGCCATCCTCCAGGTGTTATGAGAATCTaGGCTACTTTGCATGGTGGACAGTGTCTTCATGAA +
Preference number: 6 (lower is better)
Translates to: SLTSHPPGVMRI*ATLHGGQCLHE
Trigger: TTCATGAAGACACTGTCCACCATGCAAAGTAGCCAAGATTCTCATAACACCTGGAGGATGGCTGGTAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS TCA 72 bp GGATCGGTGGACTCTGAAGACAGATTCACCTGTGTCTaGTTTACTGCCATACTGTCTGTTCTGCTTTCAGAT +
Preference number: 6 (lower is better)
Translates to: GSVDSEDRFTCV*FTAILSVLLSD
Trigger: ATCTGAAAGCAGAACAGACAGTATGGCAGTAAATCAGACACAGGTGAATCTGTCTTCAGAGTCCACCGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS GCA 72 bp AGGTTTAGATCAGAATCAGTATCCTCATCCGAAATGTaGACTAGTGTTTCTGTGCTGGCCTCGAGCGATAGA +
Preference number: 6 (lower is better)
Translates to: RFRSESVSSSEM*TSVSVLASSDR
Trigger: TCTATCGCTCGAGGCCAGCACAGAAACACTAGTGCACATTTCGGATGAGGATACTGATTCTGATCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp TCGATGGCGTCTCTGTCCAAGAAGTCATGTTCTCTCTaGACCAGCGCAATATCAATAGGGAACAGTAGATCT +
Preference number: 6 (lower is better)
Translates to: SMASLSKKSCSL*TSAISIGNSRS
Trigger: AGATCTACTGTTCCCTATTGATATTGCGCTGGTCAAGAGAGAACATGACTTCTTGGACAGAGACGCCATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp GCCGCTAGGTTTTCATTCAGGTCTTTCTGGTCTGGTTaGCCCAAACTCTGTTTTCTTTGCATTACCCTTGGA +
Preference number: 6 (lower is better)
Translates to: AARFSFRSFWSG*PKLCFLCITLG
Trigger: TCCAAGGGTAATGCAAAGAAAACAGAGTTTGGGCAAACCAGACCAGAAAGACCTGAATGAAAACCTAGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CAA 72 bp CCTGCATTGTTGAGTGATGACTGCAGAATCAAGCAGTaGTGTCTCAGGTGTGACATCTTCTATGAGTACCGA +
Preference number: 6 (lower is better)
Translates to: PALLSDDCRIKQ*CLRCDIFYEYR
Trigger: TCGGTACTCATAGAAGATGTCACACCTGAGACACAACTGCTTGATTCTGCAGTCATCACTCAACAATGCAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS TCA 72 bp AGATCTGCAGGAAGGTTTCGGAGAGTTTGTTCGTCATaGGGGGCTCAGGAAGATCTCGAAAATATTGCTTTA +
Preference number: 6 (lower is better)
Translates to: RSAGRFRRVCSS*GAQEDLENIAL
Trigger: TAAAGCAATATTTTCGAGATCTTCCTGAGCCCCTCATGACGAACAAACTCTCCGAAACCTTCCTGCAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033923.14
ENSMUST00000098826.10
ENSMUST00000163663.3
CDS CCA 72 bp GTCTTCATGAAGGAGCCTGCTCCTTTGACACTATCTTaGCTGTCTCTTTCATGTCTTTGCGGAGTTAAAATC +
Preference number: 6 (lower is better)
Translates to: VFMKEPAPLTLS*LSLSCLCGVKI
Trigger: GATTTTAACTCCGCAAAGACATGAAAGAGACAGCCAAGATAGTGTCAAAGGAGCAGGCTCCTTCATGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp CCGATTATTTTCCTGGTCATCTTTAGGGAAGTCAGATTTCCTGCATaGTTGAGTGATGACTGCAGAATCAAGCAGTTGTGTCTCAGGTGT +
Preference number: 6 (lower is better)
Translates to: PIIFLVIFREVRFPA*LSDDCRIKQLCLRC
Trigger: ACACCTGAGACACAACTGCTTGATTCTGCAGTCATCACTCAACAATGCAGGAAATCTGACTTCCCTAAAGATGACCAGGAAAATAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp TTCCTGGTCATCTTTAGGGAAGTCAGATTTCCTGCATaGTTGAGTGATGACTGCAGAATCAAGCAGTTGTGT +
Preference number: 6 (lower is better)
Translates to: FLVIFREVRFPA*LSDDCRIKQLC
Trigger: ACACAACTGCTTGATTCTGCAGTCATCACTCAACAATGCAGGAAATCTGACTTCCCTAAAGATGACCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp ATTATTTTCCTGGTCATCTTTAGGGAAGTCAGATTTCCTGCATTGTaGAGTGATGACTGCAGAATCAAGCAGTTGTGTCTCAGGTGTGAC +
Preference number: 6 (lower is better)
Translates to: IIFLVIFREVRFPAL*SDDCRIKQLCLRCD
Trigger: GTCACACCTGAGACACAACTGCTTGATTCTGCAGTCATCACTCAACAATGCAGGAAATCTGACTTCCCTAAAGATGACCAGGAAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 90 bp CTTCCGTATTCAAAGACTGGAATGTATTTCCTATGGGCACATCTTTaGTTTCATCTGCACTCGTATTCTTACAAAGCCCCAGGCTTTTAT +
Preference number: 6 (lower is better)
Translates to: LPYSKTGMYFLWAHL*FHLHSYSYKAPGFY
Trigger: ATAAAAGCCTGGGGCTTTGTAAGAATACGAGTGCAGATGAAACAAAAGATGTGCCCATAGGAAATACATTCCAGTCTTTGAATACGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CCA 72 bp GTCTTAGGAGTGACGTCATCTTCCGTATTCAAAGACTaGAATGTATTTCCTATGGGCACATCTTTTGTTTCA +
Preference number: 6 (lower is better)
Translates to: VLGVTSSSVFKD*NVFPMGTSFVS
Trigger: TGAAACAAAAGATGTGCCCATAGGAAATACATTCCAGTCTTTGAATACGGAAGATGACGTCACTCCTAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp TCAAAGACTGGAATGTATTTCCTATGGGCACATCTTTaGTTTCATCTGCACTCGTATTCTTACAAAGCCCCA +
Preference number: 6 (lower is better)
Translates to: SKTGMYFLWAHL*FHLHSYSYKAP
Trigger: TGGGGCTTTGTAAGAATACGAGTGCAGATGAAACAAAAGATGTGCCCATAGGAAATACATTCCAGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3
CDS CAA 72 bp CTTTCATGTCTTTGCGGAGTTAAAATCTGTGAGTCATaGATAAGGTTTAGATCAGAATCAGTATCCTCATCC +
Preference number: 6 (lower is better)
Translates to: LSCLCGVKICES*IRFRSESVSSS
Trigger: GGATGAGGATACTGATTCTGATCTAAACCTTATCAATGACTCACAGATTTTAACTCCGCAAAGACATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163663.3