Pregenerated sensors for DLAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000168Ensembl transcript IDs: ENSMUST00000034567.4
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCAGTTTTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATaGGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACA | + |
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Preference number: 1 (lower is better) Translates to: SAVFSTSVLKRQAPA*DCLYRNTAIGGLWT Trigger: TGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAAAACTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 90 bp | GTTGTTGAACTATCCTCCGGCTTTATCGTTTTGAGTAGCTGCGGATaGAGCACCAGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAA | + |
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Preference number: 1 (lower is better) Translates to: VVELSSGFIVLSSCG*STRCLFWALHVALQ Trigger: TTGCAGTGCTACATGCAATGCCCAGAACAGGCACCTGGTGCTGCATCCGCAGCTACTCAAAACGATAAAGCCGGAGGATAGTTCAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 90 bp | TTTTTCAATTTCACATTTGATCAGATTTGCCTCATGCTAATGATGTaGCCTTGTGGTAAGCAAGCATATTCTTTCTGCAGTTTTCAGTAC | + |
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Preference number: 1 (lower is better) Translates to: FFNFTFDQICLMLMM*PCGKQAYSFCSFQY Trigger: GTACTGAAAACTGCAGAAAGAATATGCTTGCTTACCACAAGGGCACATCATTAGCATGAGGCAAATCTGATCAAATGTGAAATTGAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 90 bp | TTAGCAAAGAAGGAGTCATTTTTCAATTTCACATTTGATCAGATTTaGCTCATGCTAATGATGTGCCCTTGTGGTAAGCAAGCATATTCT | + |
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Preference number: 1 (lower is better) Translates to: LAKKESFFNFTFDQI*LMLMMCPCGKQAYS Trigger: AGAATATGCTTGCTTACCACAAGGGCACATCATTAGCATGAGGCAAATCTGATCAAATGTGAAATTGAAAAATGACTCCTTCTTTGCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 90 bp | TATTCTGAGTCCAGATTTCGATTACAGGTGAGATTCAGTCTTACCTaGGAACATGTTTGTCAGATGACAACCTTTTATTTTTCTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: YSESRFRLQVRFSLT*EHVCQMTTFYFSFK Trigger: CTTGAAAGAAAAATAAAAGGTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGAAATCTGGACTCAGAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTCGGGATGCAGCACCAGGTaGCTGTTCTGGGCATTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TVFTETRPLEACGQFGVSGCSTR*LFWALH Trigger: ATGCAATGCCCAGAACAGGCACCTGGTGCTGCATCC...CGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTTCCAGGTTACTTTTATaGGCCTGCCCATCCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: GLSLQKHGHWRLVDSLECSRLLL*ACPSYA Trigger: GGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGA...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATGGGACTGTCTTTACAGAAGTTTTTCTGTCCAGTaGGATCTGAGGGCTCTTATT | + |
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Preference number: 2 (lower is better) Translates to: FSTSVLKRQAPAWDCLYRSFSVQ*DLRALI Trigger: AATAAGAGCCCTCAGATCCCACTGGACAGAAAAACT...TCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATGGGACTGTCTTTACAGAAAAGAGCACTCAGGCTaGAGGGAGTTAGAAAAACTA | + |
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Preference number: 2 (lower is better) Translates to: FSTSVLKRQAPAWDCLYRKEHSG*RELEKL Trigger: TAGTTTTTCTAACTCCCTCCAGCCTGAGTGCTCTTT...TCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR CAA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTaGGAGTGTCGTCGTGCACCATGTGATAATGAACACTTAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: GLSLQKHGHWRLVDS*ECRRAPCDNEHLET Trigger: TGTTTCTAAGTGTTCATTATCACATGGTGCACGACGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTCCTCCAACGGAAGGGTaGAACATAATAAAACAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLSLQKHGHWRLVDSLECPPTEG*NIIKQK Trigger: CTTTTGTTTTATTATGTTTCACCCTTCCGTTGGAGG...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGTTTTTCTGTCCAGTGGGATCTGAGGGCTCTTATTTCACACGGGATAGGTTAACAGTAATAACGTaGCACTCGGGTCCATGTACA | + |
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Preference number: 2 (lower is better) Translates to: SKFFCPVGSEGSYFTRDRLTVIT*HSGPCT Trigger: TGTACATGGACCCGAGTGTCACGTTATTACTGTTAA...CCTATCCCGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAGAAAAACTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAACACTGTTTCTAACGTCTTTAGTTACTATTCTGAGTCCAGATTTCGATCTGTCCAGTGGGATCTaGGGGCTCTTATTTCACACG | + |
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Preference number: 2 (lower is better) Translates to: PKTLFLTSLVTILSPDFDLSSGI*GLLFHT Trigger: CGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAG...ATCGAAATCTGGACTCAGAATAGTAACTAAAGACGTTAGAAACAGTGTTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR GCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTGTGTTCACTTCAATATaGATGTTCTTTTATTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLSLQKHGHWRLVDSLECVFTSI*MFFYSE Trigger: CTCCGAATAAAAGAACATGCATATTGAAGTGAACAC...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR-3UTR GCA 90 bp | TCGATTACAGGTGAGATTCAGTCTTACCTGAGAACATGTTTGTCAGATGACAACTTATTCGGAGGAAACTaGAGAATTCTCAAGTTATAC | + |
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Preference number: 2 (lower is better) Translates to: SITGEIQSYLRTCLSDDNLFGGN*RILKLY Trigger: GTATAACTTGAGAATTCTGCAGTTTCCTCCGAATAA...GTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR CCA 72 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATaGGACTGTCTTTACAGAAACACGGCCATTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: FSTSVLKRQAPA*DCLYRNTAIGG Trigger: GCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 72 bp | CTATCCTCCGGCTTTATCGTTTTGAGTAGCTGCGGATaGAGCACCAGGTGCCTGTTCTGGGCATTGCATGTA | + |
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Preference number: 3 (lower is better) Translates to: LSSGFIVLSSCG*STRCLFWALHV Trigger: TACATGCAATGCCCAGAACAGGCACCTGGTGCTGCATCCGCAGCTACTCAAAACGATAAAGCCGGAGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 72 bp | AGTTTTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTaGATGGGACTGTCTTTACAGAAACACGGCCATTGG | + |
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Preference number: 3 (lower is better) Translates to: SFQYLSAEEAGP*MGLSLQKHGHW Trigger: CCAATGGCCGTGTTTCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | ATTCTAAACTCCAAGGTCTCATCCAGGTTACTTTTATaGGCCTGCCCATCCTATGCCCCTAGGAAGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: ILNSKVSSRLLL*ACPSYAPRKAF Trigger: GAAGGCCTTCCTAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGTTTAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | AGCATATTCTTTCTGCAGTTTTCAGTACCTCAGTGCTaGAGAGGCAGGCCCCTGCATGGGACTGTCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: SIFFLQFSVPQC*RGRPLHGTVFT Trigger: TGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAAAACTGCAGAAAGAATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR CCA 72 bp | TACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTaGAGTGTCGTCGTGCACCATGTGATAATGAACACT | + |
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Preference number: 3 (lower is better) Translates to: YRNTAIGGLWTV*SVVVHHVIMNT Trigger: AGTGTTCATTATCACATGGTGCACGACGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 72 bp | ATGATGTGCCCTTGTGGTAAGCAAGCATATTCTTTCTaGAGTTTTCAGTACCTCAGTGCTGAAGAGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: MMCPCGKQAYSF*SFQYLSAEEAG Trigger: GCCTGCCTCTTCAGCACTGAGGTACTGAAAACTGCAGAAAGAATATGCTTGCTTACCACAAGGGCACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | CTGAGGGCTCTTATTTCACACGGGATAGGACTGGGGTaGGAGAACACTCTTGAATATACACTTTTTCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: LRALISHGIGLG*ENTLEYTLFQK Trigger: TTTTTGAAAAAGTGTATATTCAAGAGTGTTCTCTCACCCCAGTCCTATCCCGTGTGAAATAAGAGCCCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 72 bp | GCAAAGCTCCACTTCTACAACGTGTTCACTTCAATATaGATGTTCTTTTATTCGGAGGAAACTGCAGAATTC | + |
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Preference number: 3 (lower is better) Translates to: AKLHFYNVFTSI*MFFYSEETAEF Trigger: GAATTCTGCAGTTTCCTCCGAATAAAAGAACATGCATATTGAAGTGAACACGTTGTAGAAGTGGAGCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR GCA 72 bp | TTCACATTTGATCAGATTTGCCTCATGCTAATGATGTaGCCTTGTGGTAAGCAAGCATATTCTTTCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: FTFDQICLMLMM*PCGKQAYSFCS Trigger: ACTGCAGAAAGAATATGCTTGCTTACCACAAGGGCACATCATTAGCATGAGGCAAATCTGATCAAATGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | TTAGTTACTATTCTGAGTCCAGATTTCGATTACAGGTaGGATTCAGTCTTACCTGAGAACATGTTTGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVTILSPDFDYR*DSVLPENMFVR Trigger: TCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGAAATCTGGACTCAGAATAGTAACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | ATTAGCAAAGAAGGAGTCATTTTTCAATTTCACATTTaGTCAGATTTGCCTCATGCTAATGATGTGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: ISKEGVIFQFHI*SDLPHANDVPL Trigger: CAAGGGCACATCATTAGCATGAGGCAAATCTGATCAAATGTGAAATTGAAAAATGACTCCTTCTTTGCTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | TCCAGATTTCGATTACAGGTGAGATTCAGTCTTACCTaGGAACATGTTTGTCAGATGACAACCTTTTATTTT | + |
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Preference number: 3 (lower is better) Translates to: SRFRLQVRFSLT*EHVCQMTTFYF Trigger: AAAATAAAAGGTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGAAATCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| 3UTR TCA 72 bp | GTTATTTTTAAAGTCACAAGTAACCCCAAACATTTATaGAAACACATCACATCAACAGGAAGTCTGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: VIFKVTSNPKHL*KHITSTGSLFP Trigger: TGGGAACAGACTTCCTGTTGATGTGATGTGTTTTCATAAATGTTTGGGGTTACTTGTGACTTTAAAAATAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCGGCTGCAGCTGGGGCTaGCTGTGGGGCAGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPGCSWG*LWGSCR Trigger: GCGGCAGCTGCCCCACAGGCAGCCCCAGCTGCAGCC...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTCGAGCTGCCACCGGGGGTaGGGCAGGTGGTGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TVFTETRPLEACGQFGVSSCHRG*GRWCCL Trigger: CAGGCAGCACCACCTGCCCCACCCCCGGTGGCAGCT...CGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | CACCAGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACAAGCGCTTGCAGAAGGTaGCGCTGGGGCAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HQVPVLGIACSTAKCPQTSACRR*RWGSSW Trigger: CCAGCTGCTGCCCCAGCGGCACCTTCTGCAAGCGCT...TGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | CTTCCCTCCAACGGAAGGGTGAAACATAATAAAACAAAAGAGCACTCAGGCTGGAGCTGGGGCTGCCTGTaGGGCAGCTGCCGCCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSNGRVKHNKTKEHSGWSWGCL*GSCRRQ Trigger: TTGGCGGCGGCAGCTGCCCCACAGGCAGCCCCAGCT...CCAGCCTGAGTGCTCTTTTGTTTTATTATGTTTCACCCTTCCGTTGGAGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTCCCACCTCTGGACCGTaGCCATGGTCATGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLSLQKHGHWRLVDSLECPTSGP*PWSWLG Trigger: CCCCAACCATGACCATGGGCACGGTCCAGAGGTGGG...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTGCGGGCTATGGTGCCTaGCTGCATTGTAGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GLSLQKHGHWRLVDSLECAGYGA*LHCRGK Trigger: CTTTCCCCTACAATGCAGGCAGGCACCATAGCCCGC...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | TCTAAGTTTTTCTGTCCAGTGGGATCTGAGGGCTCTTATTTCACACGGGATAGGGGGAGCCATGGCAGCTaGTGCAGCAGGAGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SKFFCPVGSEGSYFTRDRGSHGS*CSRSSL Trigger: AAGGCTGCTCCTGCTGCAGCAGCTGCCATGGCTCCC...CCTATCCCGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAGAAAAACTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | TCGATTACAGGTGAGATTCAGTCTTACCTGAGAACATGTTTGTCAGATGACAACGACCCGGGGGAGCCATaGCAGCTGCTGCAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SITGEIQSYLRTCLSDDNDPGEP*QLLQQE Trigger: CTCCTGCTGCAGCAGCTGCCATGGCTCCCCCGGGTC...GTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATGGGACTGTCTTTACAGAAATCCCTTTCTCTGCTaGCAACTTCTTCGCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FSTSVLKRQAPAWDCLYRNPFLC*QLLRKR Trigger: CCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATT...TCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | CTTCCCTCCAACGGAAGGGTGAAACATAATAAAACAAAAGAGCACTCAGGCTGGAGCCATGGCAGCTGCTaGAGCAGGAGCAGCCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LPSNGRVKHNKTKEHSGWSHGSC*SRSSLR Trigger: TCTAAGGCTGCTCCTGCTGCAGCAGCTGCCATGGCT...CCAGCCTGAGTGCTCTTTTGTTTTATTATGTTTCACCCTTCCGTTGGAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTAGACTGCATGAGCCTCTaGGCAATCACTCGACGAATG | + |
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Preference number: 4 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLDCMSL*AITRRM Trigger: CATTCGTCGAGTGATTGCGCAGAGGCTCATGCAGTC...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCCCACTGGGCTCCAACTaGTCCATCCACAACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPPLGSN*SIHNSM Trigger: CATCGAGTTGTGGATGGAGCAGTTGGAGCCCAGTGG...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 51% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTCGTTCTTTTCCCACCTCTaGACCGTGCCCATGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: TVFTETRPLEACGQFGVSFFSHL*TVPMVM Trigger: CATGACCATGGGCACGGTCCAGAGGTGGGAAAAGAA...CGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR TCA 90 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATGGGACTGTCTTTACAGACAGACAGGCCAAAGCTaGAGCCTTTATAATGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FSTSVLKRQAPAWDCLYRQTGQS*SLYNEV Trigger: GACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCTG...TCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCGCTATGGTGCCTGCCTaGATTGTAGGGGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPAMVPA*IVGERE Trigger: TTCCCTTTCCCCTACAATGCAGGCAGGCACCATAGC...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | GGACTGTCTTTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTTGGAGTGTGAGGAACATCCCTTGTaGCTTCAGGGACCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GLSLQKHGHWRLVDSLECEEHPL*LQGPGF Trigger: AAATCCTGGTCCCTGAAGGCACAAGGGATGTTCCTC...ACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAAAGACAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR GCA 90 bp | ATGTACAGTCACCATCCGGCTCATCTCAGAAGCAAAGCTCCACTTCTACAACGTGTCGGTCTCTATCTCTaGCAGCAAGTCTCCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: MYSHHPAHLRSKAPLLQRVGLYL*QQVSFT Trigger: AGTGAAGGAGACTTGCTGGCAGAGATAGAGACCGAC...ACGTTGTAGAAGTGGAGCTTTGCTTCTGAGATGAGCCGGATGGTGACTGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | CACATCACATCAACAGGAAGTCTGTTCCCAATTTATTTTTACTATCCTGCATGTTGCAGAAGGTGCCGCTaGGGCAGCAGCTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HITSTGSLFPIYFYYPACCRRCR*GSSWSW Trigger: CCAGCTCCAGCTGCTGCCCCAGCGGCACCTTCTGCA...ACATGCAGGATAGTAAAAATAAATTGGGAACAGACTTCCTGTTGATGTGATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCGCTGGTCACTTCTGTTaGCCTGTAGTCTGCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPAGHFC*PVVCKC Trigger: GCATTTGCAGACTACAGGCCAACAGAAGTGACCAGC...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | ATGTACAGTCACCATCCGGCTCATCTCAGAAGCAAAGCTCCACTTCTACAACGTCCTGTGGCTTTAAGCTaGTCACTTCTGTTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MYSHHPAHLRSKAPLLQRPVALS*SLLLAC Trigger: ACAGGCCAACAGAAGTGACCAGCTTAAAGCCACAGG...ACGTTGTAGAAGTGGAGCTTTGCTTCTGAGATGAGCCGGATGGTGACTGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCCCCGTCCCTTTAACTTaGGTGAGGTCAATCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPPVPLT*VRSIPF Trigger: GAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGG...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| 3UTR CAA 72 bp | TTACAGAAACACGGCCATTGGAGGCTTGTGGACAGTTaGGAGTGTCGTCGTGCACCATGTGATAATGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKHGHWRLVDS*ECRRAPCDNEH Trigger: GTGTTCATTATCACATGGTGCACGACGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR TCA 90 bp | CACCAGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACACTGACGTCAACCACATaGTTTTGCCTTATAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQVPVLGIACSTAKCPQTLTSTT*FCLITV Trigger: CACAGTTATAAGGCAAAATCATGTGGTTGACGTCAG...TGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACATCCTGATCAGTTTATCCTCTaGAGCACCGATTGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLFWALHVALQNAHKHPDQFIL*STDCQN Trigger: ATTCTGGCAATCGGTGCTTCAGAGGATAAACTGATC...AGGATGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTTTTTCTGTCCAGTGGGATCTGAGGGCTCTTATTTCACACGGGATAGGCCATCCACAACTCGATaGTCACAGCTGAGTGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: SKFFCPVGSEGSYFTRDRPSTTR*SQLSVT Trigger: CGTTACACTCAGCTGTGATCATCGAGTTGTGGATGG...CCTATCCCGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAGAAAAACTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACATCCTAAGGCCTCAATATCCTaGGGCTTTTCAACTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RCLFWALHVALQNAHKHPKASIS*GFSTVI Trigger: TATCACAGTTGAAAAGCCTCAGGATATTGAGGCCTT...AGGATGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACATCCTGCCTTTCTCATTATCTaGTGGGATCAGTTTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLFWALHVALQNAHKHPAFLII*WDQFIL Trigger: GAGGATAAACTGATCCCAGCAGATAATGAGAAAGGC...AGGATGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTATACCCTCTCTCGCTTTaGAGGCTAAAGAAACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLYPLSL*RLKKQH Trigger: ATGTTGTTTCTTTAGCCTCCAAAGCGAGAGAGGGTA...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR TCA 90 bp | ATGTACAGTCACCATCCGGCTCATCTCAGAAGCAAAGCTCCACTTCTACAACGTCCTGTTTTTCTACTATaGTACATAGTGGAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MYSHHPAHLRSKAPLLQRPVFLL*YIVELP Trigger: TGGGAGCTCCACTATGTATCATAGTAGAAAAACAGG...ACGTTGTAGAAGTGGAGCTTTGCTTCTGAGATGAGCCGGATGGTGACTGTACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCTGTTGGCCTGTAGTCTaGAAATGCTGCTATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LETDSTPMKHFKFQGVAPCWPVV*KCCYIF Trigger: GAAGATATAGCAGCATTTGCAGACTACAGGCCAACA...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTTTTTCTGTCCAGTGGGATCTGAGGGCTCTTATTTCACACGGGATAGGCATCCAAGACGAGTTTaGTTCGGGAACTTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKFFCPVGSEGSYFTRDRHPRRV*FGNFQT Trigger: TGTCTGAAAGTTCCCGAAGCAAACTCGTCTTGGATG...CCTATCCCGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAGAAAAACTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | TACAACGTGTTCACTTCAATATGCATGTTCTTTTATTCGGAGGAAACTGCAGAAGTAGGTGCTACAGGCTaGGGAGTGGGAGGAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNVFTSICMFFYSEETAEVGATG*GVGGTA Trigger: AGCTGTTCCTCCCACTCCCCAGCCTGTAGCACCTAC...TTCTGCAGTTTCCTCCGAATAAAAGAACATGCATATTGAAGTGAACACGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | CCCAAAACACTGTTTCTAACGTCTTTAGTTACTATTCTGAGTCCAGATTTCGATGTCTGTGAAGACACCTaGAGGAGCTGGTGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKTLFLTSLVTILSPDFDVCEDT*RSWCHS Trigger: AGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGAC...ATCGAAATCTGGACTCAGAATAGTAACTAAAGACGTTAGAAACAGTGTTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTACAGTCCTTTTATGTGTaGATTAAACACAATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLQSFYV*IKHNRG Trigger: ACCCCTATTGTGTTTAATGCACACATAAAAGGACTG...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACATCCTGATTGCCAGAATACATaGCTGAGGTGGATTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLFWALHVALQNAHKHPDCQNT*LRWINN Trigger: ATTATTAATCCACCTCAGGCATGTATTCTGGCAATC...AGGATGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTAAATACATGCCTGAGGTaGATTAATAATTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLNTCLR*INNCRE Trigger: TTCTCTGCAATTATTAATCCACCTCAGGCATGTATT...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | CACATCACATCAACAGGAAGTCTGTTCCCAATTTATTTTTACTATCCTGCATGTAATTCAGCAAGCCACTaGGCTCCAACTGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HITSTGSLFPIYFYYPACNSASH*APTAPS Trigger: GGATGGAGCAGTTGGAGCCCAGTGGCTTGCTGAATT...ACATGCAGGATAGTAAAAATAAATTGGGAACAGACTTCCTGTTGATGTGATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | CACATCACATCAACAGGAAGTCTGTTCCCAATTTATTTTTACTATCCTGCATGTGTCAATCCCTTTCTCTaGTGCCAACTTCTTCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HITSTGSLFPIYFYYPACVNPFL*CQLLRK Trigger: CTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGAC...ACATGCAGGATAGTAAAAATAAATTGGGAACAGACTTCCTGTTGATGTGATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR GCA 90 bp | TACAACGTGTTCACTTCAATATGCATGTTCTTTTATTCGGAGGAAACTGCAGAACCTGTAGTCTGCAAATaGTGCTATATCTTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YNVFTSICMFFYSEETAEPVVCK*CYIFLF Trigger: AAACAGGAAGATATAGCAGCATTTGCAGACTACAGG...TTCTGCAGTTTCCTCCGAATAAAAGAACATGCATATTGAAGTGAACACGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CCA 90 bp | TACAACGTGTTCACTTCAATATGCATGTTCTTTTATTCGGAGGAAACTGCAGAATCTCAAACCCAACAGTaGCTTTATCAGTTTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YNVFTSICMFFYSEETAESQTQQ*LYQFQP Trigger: AGGTTGAAACTGATAAAGCCACTGTTGGGTTTGAGA...TTCTGCAGTTTCCTCCGAATAAAAGAACATGCATATTGAAGTGAACACGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| 3UTR CAA 72 bp | ATTACAGGTGAGATTCAGTCTTACCTGAGAACATGTTaGTCAGATGACAACCTTTTATTTTTCTTTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITGEIQSYLRTC*SDDNLLFFFQE Trigger: CTCTTGAAAGAAAAATAAAAGGTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | TGGGCGACCCCAGGAGTTGTCGCAGCAAGCGGTTACGCGGGACAGTaGCGGAGCCGGAGCTCCAGCCGCACAAGGAGCGGACCCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: WATPGVVAASGYAGQ*RSRSSSRTRSGPHS Trigger: GCTATGGGGTCCGCTCCTTGTGCGGCTGGAGCTCCGGCTCCGGCACTGTCCCGCGTAACCGCTTGCTGCGACAACTCCTGGGGTCGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS CCA 90 bp | GTAATGGAACCTTCTGATGCGGAGGGAGGCTGTAAGAGCGGCGGCTaGGCGACCCCAGGAGTTGTCGCAGCAAGCGGTTACGCGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VMEPSDAEGGCKSGG*ATPGVVAASGYAGQ Trigger: CTGTCCCGCGTAACCGCTTGCTGCGACAACTCCTGGGGTCGCCCAGCCGCCGCTCTTACAGCCTCCCTCCGCATCAGAAGGTTCCATTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | AATGTTGCTGATGGGGATGTCTGTGAAGACACCTGCAGGAGCTGGTaGCACTCTTGGACCCGGGGGAGCCATGGCAGCTGCTGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVADGDVCEDTCRSW*HSWTRGSHGSCCSR Trigger: CCTGCTGCAGCAGCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS CCA 90 bp | ACGAATGTTGCTGATGGGGATGTCTGTGAAGACACCTGCAGGAGCTaGTGCCACTCTTGGACCCGGGGGAGCCATGGCAGCTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TNVADGDVCEDTCRS*CHSWTRGSHGSCCS Trigger: GCTGCAGCAGCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | AAGAACAATCTGCATATGAGTAGGATAGGAGCTACCGGGAGCGCTTaGAGAAGGTGCCGCTGGGGCAGCAGCTGGAGCTGGGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNNLHMSRIGATGSA*RRCRWGSSWSWGCS Trigger: GCTGCAGCCCCAGCTCCAGCTGCTGCCCCAGCGGCACCTTCTGCAAGCGCTCCCGGTAGCTCCTATCCTACTCATATGCAGATTGTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | AATCACTCGACGAATGTTGCTGATGGGGATGTCTGTGAAGACACCTaGAGGAGCTGGTGCCACTCTTGGACCCGGGGGAGCCATGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NHSTNVADGDVCEDT*RSWCHSWTRGSHGS Trigger: GCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATTCGTCGAGTGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCGAGCTGGTGCCACTCTaGGACCCGGGGGAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LETDSTPMKHFKFQGVAPELVPL*DPGEPW Trigger: CCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTC...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | ATGTACAGTCACCATCCGGCTCATCTCAGAAGCAAAGCTCCACTTCTACAACGTCGAACACCCTTCCCTTaGGTCCAGCAGGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MYSHHPAHLRSKAPLLQRRTPFP*VQQEQL Trigger: CAGCTGCTCCTGCTGGACCAAAGGGAAGGGTGTTCG...ACGTTGTAGAAGTGGAGCTTTGCTTCTGAGATGAGCCGGATGGTGACTGTACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | TGGTCCCGTCCCTTTAACTTGGGTGAGGTCAATCCCTTTCTCTGCTaGCAACTTCTTCGCAAGAGGACTAACGAACACCCTTCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSRPFNLGEVNPFLC*QLLRKRTNEHPSLW Trigger: CCAAAGGGAAGGGTGTTCGTTAGTCCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGTACCTCAGTGCTGAAGAGGCAGGCCCCTGCATGGGACTGTCTTTACAGAATCACTCGACGAATGTaGCTGATGGGGATGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSTSVLKRQAPAWDCLYRITRRM*LMGMSV Trigger: CACAGACATCCCCATCAGCAACATTCGTCGAGTGAT...TCTGTAAAGACAGTCCCATGCAGGGGCCTGCCTCTTCAGCACTGAGGTACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | TTCTGGTCCCGTCCCTTTAACTTGGGTGAGGTCAATCCCTTTCTCTaGTGCCAACTTCTTCGCAAGAGGACTAACGAACACCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWSRPFNLGEVNPFL*CQLLRKRTNEHPSL Trigger: AAGGGAAGGGTGTTCGTTAGTCCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGGACCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAAACAGACTCAACACCGATGAAACACTTCAAATTTCAGGGGGTGGCCCCCAAGCCTATGGTGGCCTaGTCGGTCTCTATCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LETDSTPMKHFKFQGVAPKPMVA*SVSISA Trigger: GGCAGAGATAGAGACCGACAAGGCCACCATAGGCTT...GGGGGCCACCCCCTGAAATTTGAAGTGTTTCATCGGTGTTGAGTCTGTTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS TCA 90 bp | AATTCAGCAAGCCACTGGGCTCCAACTGCTCCATCCACAACTCGATaGTCACAGCTGAGTGTAACGGACATCACACTAGCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSASHWAPTAPSTTR*SQLSVTDITLATSK Trigger: CTTTGATGTGGCTAGTGTGATGTCCGTTACACTCAGCTGTGATCATCGAGTTGTGGATGGAGCAGTTGGAGCCCAGTGGCTTGCTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACACTGTTTCTAACGTCTTTAGTTACTATTCTGAGTCCAGATTTCGATAGCTACCGGGAGCGCTaGCAGAAGGTGCCGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKTLFLTSLVTILSPDFDSYRER*QKVPLG Trigger: CCCCAGCGGCACCTTCTGCAAGCGCTCCCGGTAGCT...ATCGAAATCTGGACTCAGAATAGTAACTAAAGACGTTAGAAACAGTGTTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | AGGTGCCTGTTCTGGGCATTGCATGTAGCACTGCAAAATGCCCACAAACATCCTCCATCCAAGACGAGTTaGCTTCGGGAACTTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLFWALHVALQNAHKHPPSKTS*LRELSD Trigger: GTCTGAAAGTTCCCGAAGCAAACTCGTCTTGGATGG...AGGATGTTTGTGGGCATTTTGCAGTGCTACATGCAATGCCCAGAACAGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS CCA 90 bp | ATGTCCTTCTTGATGATTCTGCCTTCTGGTCCCGTCCCTTTAACTTaGGTGAGGTCAATCCCTTTCTCTGCTGCCAACTTCTTCGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MSFLMILPSGPVPLT*VRSIPFSAANFFAR Trigger: TCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGGACCAGAAGGCAGAATCATCAAGAAGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | TCTAAGTTTTTCTGTCCAGTGGGATCTGAGGGCTCTTATTTCACACGGGATAGGCCTCTGAAGCACCGATaGCCAGAATACATGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKFFCPVGSEGSYFTRDRPLKHR*PEYMPE Trigger: CTCAGGCATGTATTCTGGCAATCGGTGCTTCAGAGG...CCTATCCCGTGTGAAATAAGAGCCCTCAGATCCCACTGGACAGAAAAACTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | TCGATTACAGGTGAGATTCAGTCTTACCTGAGAACATGTTTGTCAGATGACAACCCAGAGGAACATCCCTaGTGCCTTCAGGGACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SITGEIQSYLRTCLSDDNPEEHP*CLQGPG Trigger: TCCTGGTCCCTGAAGGCACAAGGGATGTTCCTCTGG...GTTGTCATCTGACAAACATGTTCTCAGGTAAGACTGAATCTCACCTGTAATCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTATTACCCTCTCTCGCTTaGGAGGCTAAAGAAACAACA | + |
|
Preference number: 5 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLLPSLA*EAKETT Trigger: TGTTGTTTCTTTAGCCTCCAAAGCGAGAGAGGGTAA...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS TCA 90 bp | CATCCAAGACGAGTTTGCTTCGGGAACTTTCAGACAGGCCAAAGCTaGAGCCTTTATAATGAAGTCGTTGACGGAGATTTTCCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPRRVCFGNFQTGQS*SLYNEVVDGDFPFP Trigger: GGGAAAGGGAAAATCTCCGTCAACGACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCTGAAAGTTCCCGAAGCAAACTCGTCTTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS GCA 90 bp | CTTTTCAAGGTACTTTTTGAATTCAGCAAGCCACTGGGCTCCAACTaGTCCATCCACAACTCGATGATCACAGCTGAGTGTAACGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLFEFSKPLGSN*SIHNSMITAECNGH Trigger: ATGTCCGTTACACTCAGCTGTGATCATCGAGTTGTGGATGGAGCAGTTGGAGCCCAGTGGCTTGCTGAATTCAAAAAGTACCTTGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS-3UTR CAA 90 bp | ACTCCAAGGTCTCATCCAGGTTACTTTTATGAGCCTGCCCATCCTATGCCCCTAGTCAACCACATGATTTaGCCTTATAACTGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TPRSHPGYFYEPAHPMPLVNHMI*PYNCVH Trigger: ATGGACACAGTTATAAGGCAAAATCATGTGGTTGAC...TAGGGGCATAGGATGGGCAGGCTCATAAAAGTAACCTGGATGAGACCTTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
||
| CDS CCA 90 bp | AATATCCTGAGGCTTTTCAACTGTGATACAGATGATGGACCCAACTaGAACATCTCTGGTCCCTTCAGGAACAAGGATCTTGGCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: NILRLFNCDTDDGPN*NISGPFRNKDLGHI Trigger: TATATGGCCAAGATCCTTGTTCCTGAAGGGACCAGAGATGTTCCAGTTGGGTCCATCATCTGTATCACAGTTGAAAAGCCTCAGGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS TCA 90 bp | CACATCAAAGCCTTTCTCATTATCTGCTGGGATCAGTTTATCCTCTaGAGCACCGATTGCCAGAATACATGCCTGAGGTGGATTAATAAT | + |
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Preference number: 5 (lower is better) Translates to: HIKAFLIICWDQFIL*STDCQNTCLRWINN Trigger: ATTATTAATCCACCTCAGGCATGTATTCTGGCAATCGGTGCTTCAGAGGATAAACTGATCCCAGCAGATAATGAGAAAGGCTTTGATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS TCA 90 bp | GGGATCAGTTTATCCTCTGAAGCACCGATTGCCAGAATACATGCCTaGGGTGGATTAATAATTGCAGAGAAATTCTTAATTCCAAACATC | + |
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Preference number: 5 (lower is better) Translates to: GISLSSEAPIARIHA*GGLIIAEKFLIPNI Trigger: GATGTTTGGAATTAAGAATTTCTCTGCAATTATTAATCCACCTCAGGCATGTATTCTGGCAATCGGTGCTTCAGAGGATAAACTGATCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CAA 90 bp | CCCAAAACACTGTTTCTAACGTCTTTAGTTACTATTCTGAGTCCAGATTTCGATGAGTCAATGTCCTTCTaGATGATTCTGCCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PKTLFLTSLVTILSPDFDESMSF*MILPSG Trigger: ACCAGAAGGCAGAATCATCAAGAAGGACATTGACTC...ATCGAAATCTGGACTCAGAATAGTAACTAAAGACGTTAGAAACAGTGTTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS-3UTR CAA 90 bp | CCCAAAACACTGTTTCTAACGTCTTTAGTTACTATTCTGAGTCCAGATTTCGATCCAAACATCCCTAAGTaGGAGATTGTAAATGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PKTLFLTSLVTILSPDFDPNIPK*EIVNVP Trigger: TGGAACATTTACAATCTCCAACTTAGGGATGTTTGG...ATCGAAATCTGGACTCAGAATAGTAACTAAAGACGTTAGAAACAGTGTTTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 90 bp | ATGCGGAGGGAGGCTGTAAGAGCGGCGGCTGGGCGACCCCAGGAGTaGTCGCAGCAAGCGGTTACGCGGGACAGTGCCGGAGCCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: MRREAVRAAAGRPQE*SQQAVTRDSAGAGA Trigger: AGCTCCGGCTCCGGCACTGTCCCGCGTAACCGCTTGCTGCGACAACTCCTGGGGTCGCCCAGCCGCCGCTCTTACAGCCTCCCTCCGCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 72 bp | GAGGCTGTAAGAGCGGCGGCTGGGCGACCCCAGGAGTaGTCGCAGCAAGCGGTTACGCGGGACAGTGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: EAVRAAAGRPQE*SQQAVTRDSAG Trigger: TCCGGCACTGTCCCGCGTAACCGCTTGCTGCGACAACTCCTGGGGTCGCCCAGCCGCCGCTCTTACAGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | CCTTCTGATGCGGAGGGAGGCTGTAAGAGCGGCGGCTaGGCGACCCCAGGAGTTGTCGCAGCAAGCGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: PSDAEGGCKSGG*ATPGVVAASGY Trigger: GTAACCGCTTGCTGCGACAACTCCTGGGGTCGCCCAGCCGCCGCTCTTACAGCCTCCCTCCGCATCAGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | GTCTGTGAAGACACCTGCAGGAGCTGGTGCCACTCTTaGACCCGGGGGAGCCATGGCAGCTGCTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VCEDTCRSWCHS*TRGSHGSCCSR Trigger: CCTGCTGCAGCAGCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | GCTGATGGGGATGTCTGTGAAGACACCTGCAGGAGCTaGTGCCACTCTTGGACCCGGGGGAGCCATGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ADGDVCEDTCRS*CHSWTRGSHGS Trigger: GCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | TGGTGCCACTCTTGGACCCGGGGGAGCCATGGCAGCTaGTGCAGCAGGAGCAGCCTTAGAAGGCACAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: WCHSWTRGSHGS*CSRSSLRRHKR Trigger: TCTTTTGTGCCTTCTAAGGCTGCTCCTGCTGCAGCAGCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | ACGAATGTTGCTGATGGGGATGTCTGTGAAGACACCTaGAGGAGCTGGTGCCACTCTTGGACCCGGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TNVADGDVCEDT*RSWCHSWTRGS Trigger: GCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATTCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 90 bp | GTCTGCTTCGACTGCATGAGCCTCTGCGCAATCACTCGACGAATGTaGCTGATGGGGATGTCTGTGAAGACACCTGCAGGAGCTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VCFDCMSLCAITRRM*LMGMSVKTPAGAGA Trigger: GGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATTCGTCGAGTGATTGCGCAGAGGCTCATGCAGTCGAAGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS TCA 72 bp | AGCCACTGGGCTCCAACTGCTCCATCCACAACTCGATaGTCACAGCTGAGTGTAACGGACATCACACTAGCC | + |
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Preference number: 6 (lower is better) Translates to: SHWAPTAPSTTR*SQLSVTDITLA Trigger: GGCTAGTGTGATGTCCGTTACACTCAGCTGTGATCATCGAGTTGTGGATGGAGCAGTTGGAGCCCAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | TTCAAAGCCTATGGTGGCCTTGTCGGTCTCTATCTCTaGCAGCAAGTCTCCTTCACTCAGCTTCTCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: FKAYGGLVGLYL*QQVSFTQLLAH Trigger: GTGGGCGAGAAGCTGAGTGAAGGAGACTTGCTGGCAGAGATAGAGACCGACAAGGCCACCATAGGCTTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 72 bp | GACTGCATGAGCCTCTGCGCAATCACTCGACGAATGTaGCTGATGGGGATGTCTGTGAAGACACCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: DCMSLCAITRRM*LMGMSVKTPAG Trigger: TCCTGCAGGTGTCTTCACAGACATCCCCATCAGCAACATTCGTCGAGTGATTGCGCAGAGGCTCATGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | CTGGAACATCTCTGGTCCCTTCAGGAACAAGGATCTTaGCCATATAGCACTCCTCCAGGCTCTCAAACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LEHLWSLQEQGS*PYSTPPGSQTQ Trigger: TTGGGTTTGAGAGCCTGGAGGAGTGCTATATGGCCAAGATCCTTGTTCCTGAAGGGACCAGAGATGTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | CCCTTTAACTTGGGTGAGGTCAATCCCTTTCTCTGCTaGCAACTTCTTCGCAAGAGGACTAACGAACACCCT | + |
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Preference number: 6 (lower is better) Translates to: PFNLGEVNPFLC*QLLRKRTNEHP Trigger: AGGGTGTTCGTTAGTCCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | CGTCCCTTTAACTTGGGTGAGGTCAATCCCTTTCTCTaGTGCCAACTTCTTCGCAAGAGGACTAACGAACAC | + |
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Preference number: 6 (lower is better) Translates to: RPFNLGEVNPFL*CQLLRKRTNEH Trigger: GTGTTCGTTAGTCCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 72 bp | CTTGATGATTCTGCCTTCTGGTCCCGTCCCTTTAACTaGGGTGAGGTCAATCCCTTTCTCTGCTGCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: LDDSAFWSRPFN*GEVNPFLCCQL Trigger: AAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGGACCAGAAGGCAGAATCATCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 90 bp | AATGTCCTTCTTGATGATTCTGCCTTCTGGTCCCGTCCCTTTAACTaGGGTGAGGTCAATCCCTTTCTCTGCTGCCAACTTCTTCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: NVLLDDSAFWSRPFN*GEVNPFLCCQLLRK Trigger: CTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGGGACCAGAAGGCAGAATCATCAAGAAGGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS TCA 72 bp | GCCTTTCTCATTATCTGCTGGGATCAGTTTATCCTCTaGAGCACCGATTGCCAGAATACATGCCTGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AFLIICWDQFIL*STDCQNTCLRW Trigger: CCACCTCAGGCATGTATTCTGGCAATCGGTGCTTCAGAGGATAAACTGATCCCAGCAGATAATGAGAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS GCA 72 bp | TATGTGTGCATTAAACACAATAGGGGTGATAAGTCCTaGAGGGGTACTGACAGCAACACTGACGTCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: YVCIKHNRGDKS*RGTDSNTDVNH Trigger: GTGGTTGACGTCAGTGTTGCTGTCAGTACCCCTGCAGGACTTATCACCCCTATTGTGTTTAATGCACACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | AAAAGAGTCAATGTCCTTCTTGATGATTCTGCCTTCTaGTCCCGTCCCTTTAACTTGGGTGAGGTCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: KRVNVLLDDSAF*SRPFNLGEVNP Trigger: GGGATTGACCTCACCCAAGTTAAAGGGACGGGACCAGAAGGCAGAATCATCAAGAAGGACATTGACTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 72 bp | TTCAGGGACCAGGATTTTTGCCAGATAACCTTCTTCTaGTACTTCAAAGCCTATGGTGGCCTTGTCGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FRDQDFCQITFF*YFKAYGGLVGL Trigger: GAGACCGACAAGGCCACCATAGGCTTTGAAGTACAAGAAGAAGGTTATCTGGCAAAAATCCTGGTCCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CCA 72 bp | AGGCTTTTCAACTGTGATACAGATGATGGACCCAACTaGAACATCTCTGGTCCCTTCAGGAACAAGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: RLFNCDTDDGPN*NISGPFRNKDL Trigger: AAGATCCTTGTTCCTGAAGGGACCAGAGATGTTCCAGTTGGGTCCATCATCTGTATCACAGTTGAAAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS TCA 72 bp | CGAGTTTGCTTCGGGAACTTTCAGACAGGCCAAAGCTaGAGCCTTTATAATGAAGTCGTTGACGGAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: RVCFGNFQTGQS*SLYNEVVDGDF Trigger: AAAATCTCCGTCAACGACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCTGAAAGTTCCCGAAGCAAACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 72 bp | AGACAGGCCAAAGCTGAAGCCTTTATAATGAAGTCGTaGACGGAGATTTTCCCTTTCCCTTCAAGCATCTTA | + |
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Preference number: 6 (lower is better) Translates to: RQAKAEAFIMKS*TEIFPFPSSIL Trigger: TAAGATGCTTGAAGGGAAAGGGAAAATCTCCGTCAACGACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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| CDS CAA 90 bp | GGAACTTTCAGACAGGCCAAAGCTGAAGCCTTTATAATGAAGTCGTaGACGGAGATTTTCCCTTTCCCTTCAAGCATCTTATTAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GTFRQAKAEAFIMKS*TEIFPFPSSILLSS Trigger: GGAACTTAATAAGATGCTTGAAGGGAAAGGGAAAATCTCCGTCAACGACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCTGAAAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034567.4 |
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