Pregenerated sensors for DKKL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030792Ensembl transcript IDs: ENSMUST00000033057.9, ENSMUST00000209466.2, ENSMUST00000210741.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACCTGTCGGTGACCTTCTaGACAGGCACCGGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHLSVTF*TGTGGS Trigger: AGAGCCCCCGGTGCCTGTGCAGAAGGTCACCGACAG...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACCTTTGGAGAAGCCTCTaGAGGCCCAGGAACCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHLWRSL*RPRNPE Trigger: CTCCGGGTTCCTGGGCCTTCAGAGGCTTCTCCAAAG...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033057.9 |
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| CDS-3UTR CCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACGCGTGTTGGGGGATATaGACCCCATCCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHACWGI*TPSSRL Trigger: CAGCCTGGAGGATGGGGTCCATATCCCCCAACACGC...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR GCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACCCATCCCGGATGGCCTaGATGCGATGTCGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHPSRMA*MRCRFS Trigger: AGAAAAGCGACATCGCATGCAGGCCATCCGGGATGG...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACTGGCTGGAGAGGGTATaGTTGCCCATTCTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHWLERV*LPILCS Trigger: GGAGCACAGAATGGGCAACCATACCCTCTCCAGCCA...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACGCTGTTGGGATGGCCTaGGGATGTAGAGAAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHAVGMA*GCRESV Trigger: CACACTTTCTCTACATCCTCAGGCCATCCCAACAGC...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACGGTCTCGGAAGTCCATaGGGGAGGAGAAGAAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHGLGSP*GRRRSC Trigger: ACAACTTCTTCTCCTCCCCCATGGACTTCCGAGACC...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACAGCACCTCCCCTGTCTaGTTGTCAGTCACCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHSTSPV*LSVTLS Trigger: AGACAAGGTGACTGACAACCAGACAGGGGAGGTGCT...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACTCCTGGTTCTCTTCCTaGTGGAAGTTCCTAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHSWFSS*WKFLGR Trigger: CCTTCCTAGGAACTTCCATCAGGAAGAGAACCAGGA...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR GCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACCACCGGGGGCTCTTTTaGTTCTACTTTGGGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHHRGLF*FYFGNL Trigger: AAGGTTCCCAAAGTAGAAGCAAAAGAGCCCCCGGTG...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACTTACAGCTGTTGGGATaGCCTGAGGATGTAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHLQLLG*PEDVEK Trigger: TTTCTCTACATCCTCAGGCCATCCCAACAGCTGTAA...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS CCA 90 bp | GGCCCAGGAACCCGGAGGTGTTCTGCTGAGAGTCGACATCATGGATaGGGAGAGCAGAGGAGGACACGAAGGCCAAGGGGAGCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GPGTRRCSAESRHHG*GEQRRTRRPRGAAA Trigger: TGCTGCTGCTCCCCTTGGCCTTCGTGTCCTCCTCTGCTCTCCCCATCCATGATGTCGACTCTCAGCAGAACACCTCCGGGTTCCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 |
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| CDS CCA 90 bp | AGAAAGTGTGTCTTTCTGACAGGCAGCTTGGCGTGTTGGGGGATATaGACCCCATCCTCCAGGCTGTCCTCACGGGCGCCTCCACGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RKCVFLTGSLACWGI*TPSSRLSSRAPPRS Trigger: GCTCCGTGGAGGCGCCCGTGAGGACAGCCTGGAGGATGGGGTCCATATCCCCCAACACGCCAAGCTGCCTGTCAGAAAGACACACTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS CCA 90 bp | GCCTGCATGCGATGTCGCTTTTCTATGAGCCAGCGGCCTCCATCCTaGACATCGGGCTGGGTCCTCCGCCTTGGCATCTTCATGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: ACMRCRFSMSQRPPS*TSGWVLRLGIFMIQ Trigger: CTGGATCATGAAGATGCCAAGGCGGAGGACCCAGCCCGATGTCCAGGATGGAGGCCGCTGGCTCATAGAAAAGCGACATCGCATGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS TCA 90 bp | CCGGGTTCCGTTCTGGCTCAATGGAGGCCTCGACTTTCTCCGAGATaGGCACCTCCCCTGTCTGGTTGTCAGTCACCTTGTCTATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: PGSVLAQWRPRLSPR*APPLSGCQSPCLSV Trigger: TACAGATAGACAAGGTGACTGACAACCAGACAGGGGAGGTGCTCATCTCGGAGAAAGTCGAGGCCTCCATTGAGCCAGAACGGAACCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACGGGGAGGAGAAGAAGTaGTCCAGGTCTCGTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHGEEKK*SRSRSR Trigger: CCTGCTACGAGACCTGGACAACTTCTTCTCCTCCCC...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACGCACCGGGGGCTCTTTaGCTTCTACTTTGGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHAPGAL*LLLWEP Trigger: AGGTTCCCAAAGTAGAAGCAAAAGAGCCCCCGGTGC...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTATTTCCATATGGTGTTGGGGTAGGGTGTGGGACATCTGGTCCCCACACCTCCCCTGTCTGGTaGTCAGTCACCTTGTCTATC | + |
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Preference number: 5 (lower is better) Translates to: KPLFPYGVGVGCGTSGPHTSPVW*SVTLSI Trigger: GATAGACAAGGTGACTGACAACCAGACAGGGGAGGT...GTGGGGACCAGATGTCCCACACCCTACCCCAACACCATATGGAAATAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000210741.2 |
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| CDS CCA 72 bp | GTCTTTCTGACAGGCAGCTTGGCGTGTTGGGGGATATaGACCCCATCCTCCAGGCTGTCCTCACGGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: VFLTGSLACWGI*TPSSRLSSRAP Trigger: AGGCGCCCGTGAGGACAGCCTGGAGGATGGGGTCCATATCCCCCAACACGCCAAGCTGCCTGTCAGAAAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS CCA 72 bp | CGATGTCGCTTTTCTATGAGCCAGCGGCCTCCATCCTaGACATCGGGCTGGGTCCTCCGCCTTGGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RCRFSMSQRPPS*TSGWVLRLGIF Trigger: GAAGATGCCAAGGCGGAGGACCCAGCCCGATGTCCAGGATGGAGGCCGCTGGCTCATAGAAAAGCGACATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS CCA 72 bp | ACCCGGAGGTGTTCTGCTGAGAGTCGACATCATGGATaGGGAGAGCAGAGGAGGACACGAAGGCCAAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TRRCSAESRHHG*GEQRRTRRPRG Trigger: TCCCCTTGGCCTTCGTGTCCTCCTCTGCTCTCCCCATCCATGATGTCGACTCTCAGCAGAACACCTCCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 |
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| CDS CCA 72 bp | TTTGGGAACCTTCCAGTCCCCTTCCGGGTTCCGTTCTaGCTCAATGGAGGCCTCGACTTTCTCCGAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: FGNLPVPFRVPF*LNGGLDFLRDE Trigger: CTCATCTCGGAGAAAGTCGAGGCCTCCATTGAGCCAGAACGGAACCCGGAAGGGGACTGGAAGGTTCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS TCA 72 bp | GTTCTGGCTCAATGGAGGCCTCGACTTTCTCCGAGATaGGCACCTCCCCTGTCTGGTTGTCAGTCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VLAQWRPRLSPR*APPLSGCQSPC Trigger: ACAAGGTGACTGACAACCAGACAGGGGAGGTGCTCATCTCGGAGAAAGTCGAGGCCTCCATTGAGCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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| CDS CCA 72 bp | GCCTCGACTTTCTCCGAGATGAGCACCTCCCCTGTCTaGTTGTCAGTCACCTTGTCTATCTGTAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASTFSEMSTSPV*LSVTLSICRWL Trigger: CAGCCACCTACAGATAGACAAGGTGACTGACAACCAGACAGGGGAGGTGCTCATCTCGGAGAAAGTCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033057.9 ENSMUST00000209466.2 ENSMUST00000210741.2 |
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