Pregenerated sensors for DKK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028031Ensembl transcript IDs: ENSMUST00000029665.7
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTaGTTCAGTCCTGCCCTCTTCTGCTCCACATTCTTACCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: HNGSTGSTLVVVDST*FSPALFCSTFLPHP Trigger: GGGATGTGGTAAGAATGTGGAGCAGAAGAGGGCAGGACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR CCA 90 bp | GCTCATCCCGTCATTCAGTTCTCCTCATGTGTCAGACAACTTCAGTaGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTATTGCAC | + |
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Preference number: 1 (lower is better) Translates to: AHPVIQFSSCVRQLQ*FCNLRQFCPVLVLH Trigger: GTGCAATACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGACACATGAGGAGAACTGAATGACGGGATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR GCA 90 bp | CCCGTCATTCAGTTCTCCTCATGTGTCAGACAACTTCAGTGGTTTTaGAATCTGAGACAATTCTGCCCTGTGCTTGTATTGCACATGATT | + |
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Preference number: 1 (lower is better) Translates to: PVIQFSSCVRQLQWF*NLRQFCPVLVLHMI Trigger: AATCATGTGCAATACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGACACATGAGGAGAACTGAATGACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR GCA 90 bp | GAAATGAGTGGCCTAAAGAGACACATTTATCCTTTTCTAGCCCATTaGCTTAACAACTTGGCCAGGACTACTGATTGTTTACCCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: EMSGLKRHIYPFLAH*LNNLARTTDCLPCS Trigger: AGAACAGGGTAAACAATCAGTAGTCCTGGCCAAGTTGTTAAGGCAATGGGCTAGAAAAGGATAAATGTGTCTCTTTAGGCCACTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR TCA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTAGTTGTCGACTCTACTTaGTTCAGTCCTGCCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVVVDST*FSPALF Trigger: GAAGAGGGCAGGACTGAATCAAGTAGAGTCGACAAC...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTCTTCAGCGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTAGTCCTGCCCTCTTCTaGTCCACATTCTTACCACAT | + |
|
Preference number: 2 (lower is better) Translates to: PVLQRSPCFRDPLRLRESSPALF*STFLPH Trigger: ATGTGGTAAGAATGTGGAGCAGAAGAGGGCAGGACT...ACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACGCTGAAGAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CCA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTATTGCCTTAACAACTTaGCCAGGACTACTGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: VTLKPAQMTRFHLLPCCAIALTT*PGLLIV Trigger: AACAATCAGTAGTCCTGGCCAAGTTGTTAAGGCAAT...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCCAACTTCAGTGGTTTTaGAATCTGAGACAATTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFQLQWF*NLRQFC Trigger: GCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTG...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR CAA 90 bp | ATTGCCAATCTGAAGGAAATGCCCCCTACAGCTCTAGCCAAACTCTaGGAAAATCACATGGTATTCGTCAGTAATTTCCATGGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IANLKEMPPTALAKL*ENHMVFVSNFHGVL Trigger: AAGCACACCATGGAAATTACTGACGAATACCATGTGATTTTCCAAGAGTTTGGCTAGAGCTGTAGGGGGCATTTCCTTCAGATTGGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR TCA 90 bp | CGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTGAGAGTAATTTAAAGCCATTGCCAATCTaGAGGAAATGCCCCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RSPCFRDPLRLRESESNLKPLPI*RKCPLQ Trigger: CTGTAGGGGGCATTTCCTTCAGATTGGCAATGGCTT...TAAATTACTCTCACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGATAAAGGTATTTATCAGTATATCACAGATAGGGTATGTGCTCATCCCGTACTTGATTCAGTCCTaGCCTCTTCTGCTCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: ARIKVFISISQIGYVLIPYLIQS*PLLLHI Trigger: AATGTGGAGCAGAAGAGGGCAGGACTGAATCAAGTA...CGGGATGAGCACATACCCTATCTGTGATATACTGATAAATACCTTTATCCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCTTTACCCTGTTCTTATaGCTAAATGACATACCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFFTLFL*LNDIPV Trigger: TACTGGTATGTCATTTAGGCATAAGAACAGGGTAAA...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAACTTGGCCAGGACTACTaGTTGTTTACCCTGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: KGTHFVKSPHIEIILQPQLGQDY*LFTLFL Trigger: TAAGAACAGGGTAAACAATCAGTAGTCCTGGCCAAG...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGATAAAGGTATTTATCAGTATATCACAGATAGGGTATGTGCTCATCCCGTTGGAAAATACTGACTaGCTTTTCCTCTTGTCTACC | + |
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Preference number: 2 (lower is better) Translates to: ARIKVFISISQIGYVLIPLENTD*LFLLST Trigger: GGTAGACAAGAGGAAAAGGCAGTCAGTATTTTCCAA...CGGGATGAGCACATACCCTATCTGTGATATACTGATAAATACCTTTATCCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR GCA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCTCCAGGTTTCCATCATaGCATAATGCATTAAATACA | + |
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Preference number: 2 (lower is better) Translates to: ITEALVVLWLLSTLLDSVSRFPS*HNALNT Trigger: TGTATTTAATGCATTATGGCATGATGGAAACCTGGA...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAATCTTGGAAAATCACATaGTATTCGTCAGTAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KGTHFVKSPHIEIILQPQSWKIT*YSSVIS Trigger: GGAAATTACTGACGAATACCATGTGATTTTCCAAGA...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR GCA 72 bp | CAGCCTCAAAAGCATGATGGGGAGGGCAGGCTGCATTaGACCCAGCTTACCTGCATGAGAGCAAATTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QPQKHDGEGRLH*TQLTCMRANFM Trigger: CATGAAATTTGCTCTCATGCAGGTAAGCTGGGTGCAATGCAGCCTGCCCTCCCCATCATGCTTTTGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTGCTGTGCTCCACGAAGTACAGATATCACTCACATCTCTAGTGCCTGCACGAGCGGGAATGACATaGGCAATGCCATTCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FPAVLHEVQISLTSLVPARAGMT*AMPFLH Trigger: GTGAAGGAATGGCATTGCCAATGTCATTCCCGCTCG...TGCAGGCACTAGAGATGTGAGTGATATCTGTACTTCGTGGAGCACAGCAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR GCA 72 bp | CCACGAAGTACAGATATCACTCACATCTCTAGTGCCTaGATCACCCTACTGGCCCCCAGCTATGCAAGGATA | + |
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Preference number: 3 (lower is better) Translates to: PRSTDITHISSA*ITLLAPSYARI Trigger: TATCCTTGCATAGCTGGGGGCCAGTAGGGTGATGCAGGCACTAGAGATGTGAGTGATATCTGTACTTCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAAGGAGGGCAGGCTGCATaGCACCCAGCTTACCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: KGTHFVKSPHIEIILQPQGGQAA*HPAYLH Trigger: ATGCAGGTAAGCTGGGTGCAATGCAGCCTGCCCTCC...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | AATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCACGAAGTACAGATATCACGACTGCCTTTTCCTCTaGTCTACCAAGGCCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: NDKVPPTSLLCSTKYRYHDCLFL*STKAFI Trigger: AATAAAGGCCTTGGTAGACAAGAGGAAAAGGCAGTC...GTGATATCTGTACTTCGTGGAGCACAGCAGGGAAGTAGGTGGAACCTTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | AATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCACGAAGTACAGATATCACCATTGCCTTAACAACTaGGCCAGGACTACTGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NDKVPPTSLLCSTKYRYHHCLNN*ARTTDC Trigger: ACAATCAGTAGTCCTGGCCAAGTTGTTAAGGCAATG...GTGATATCTGTACTTCGTGGAGCACAGCAGGGAAGTAGGTGGAACCTTGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | AATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCACGAAGTACAGATATCACGCTCTAGCCAAACTCTaGGAAAATCACATGGTATTC | + |
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Preference number: 3 (lower is better) Translates to: NDKVPPTSLLCSTKYRYHALAKL*ENHMVF Trigger: GAATACCATGTGATTTTCCAAGAGTTTGGCTAGAGC...GTGATATCTGTACTTCGTGGAGCACAGCAGGGAAGTAGGTGGAACCTTGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTACAACTTCAGTGGTTTaGCAATCTGAGACAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: VTLKPAQMTRFHLLPCCATTSVV*QSETIL Trigger: CAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGT...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR-3UTR CAA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTAAGCACTGGTAGTACTTaGGTTGTTGTCGACTCTACT | + |
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Preference number: 3 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVSTGST*VVVDST Trigger: AGTAGAGTCGACAACAACCAAAGTACTACCAGTGCT...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR CCA 72 bp | GTCATTCAGTTCTCCTCATGTGTCAGACAACTTCAGTaGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: VIQFSSCVRQLQ*FCNLRQFCPVL Trigger: AAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGACACATGAGGAGAACTGAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR CCA 72 bp | CCAAATGTGTGTCCGAAGCTGGAACTCTTGTTGGACTaGACTTTGAGATTGCAGATGGGATATAAGTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: PNVCPKLELLLD*TLRLQMGYKSN Trigger: GTTTGACTTATATCCCATCTGCAATCTCAAAGTCCAGTCCAACAAGAGTTCCAGCTTCGGACACACATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR GCA 72 bp | AGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTaGCCTGTGCTTGTATTGCACATGATTAATGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RQLQWFCNLRQF*PVLVLHMINGS Trigger: GGAGCCATTAATCATGTGCAATACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| 3UTR TCA 72 bp | TGTGTCCGAAGCTGGAACTCTTGTTGGACTGGACTTTaGGATTGCAGATGGGATATAAGTCAAACAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: CVRSWNSCWTGL*DCRWDISQTKM Trigger: CATTTTTGTTTGACTTATATCCCATCTGCAATCTCAAAGTCCAGTCCAACAAGAGTTCCAGCTTCGGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR TCA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTGTACAGACTTCCCCCTaGTGGAGCACTGGTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VTLKPAQMTRFHLLPCCAVQTSP*WSTGLQ Trigger: CTGCAAACCAGTGCTCCATCAGGGGGAAGTCTGTAC...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | TTCCCTGCTGTGCTCCACGAAGTACAGATATCACTCACATCTCTAGTGCCTGCATGGTTGCGATCTCTATaGCGGGTGCCATCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPAVLHEVQISLTSLVPAWLRSL*RVPSRA Trigger: AGCTCTGGATGGCACCCGGCATAGAGATCGCAACCA...TGCAGGCACTAGAGATGTGAGTGATATCTGTACTTCGTGGAGCACAGCAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR CCA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCGAAAGCCAGTCCTTaGTTCATGCCTGCAGATCGG | + |
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Preference number: 4 (lower is better) Translates to: VTLKPAQMTRFHLLPCCAPKASP*FMPADR Trigger: CCGATCTGCAGGCATGAACCAAGGACTGGCTTTCGG...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR TCA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTATGCAGATCGGTTGGCTaGCTGAGCAGGAGTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVCRSVG*LSRSLP Trigger: GGGGAGACTCCTGCTCAGTCAGCCAACCGATCTGCA...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCGTTTGGCCCGCGAGCTaGCTAGCTGTGAGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ITEALVVLWLLSTLLDSVVWPAS*LAVSSP Trigger: TGGAGAGCTCACAGCTAGGCAGCTCGCGGGCCAAAC...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCTTTTGCCCTTCTTACTaGCGCCGAAAGCCAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFFCPSY*RRKPVL Trigger: AAGGACTGGCTTTCGGCGGCAGTAAGAAGGGCAAAA...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | TTCCCTGCTGTGCTCCACGAAGTACAGATATCACTCACATCTCTAGTGCCTGCACGTGCGAACCCTTCTTaGGTTGTTTGGTACAGACTT | + |
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Preference number: 4 (lower is better) Translates to: FPAVLHEVQISLTSLVPARANPS*VVWYRL Trigger: AAGTCTGTACCAAACAACGCAAGAAGGGTTCGCACG...TGCAGGCACTAGAGATGTGAGTGATATCTGTACTTCGTGGAGCACAGCAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAACCTGCCCCAGGCTTTTaGCCTTCTTACTGCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: KGTHFVKSPHIEIILQPQPAPGF*PSYCRR Trigger: TCGGCGGCAGTAAGAAGGGCAAAAGCCTGGGGCAGG...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTAACAAAACCCATCAATaGAGTCTGATGACCGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VTLKPAQMTRFHLLPCCANKTHQ*SLMTVG Trigger: GCCTACGGTCATCAGACTGCATTGATGGGTTTTGTT...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR CCA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTACAGGCTGATGATCCTTaGTGGGGACTGTGGCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVQADDP*WGLWQY Trigger: ATACTGCCACAGTCCCCACCAAGGATCATCAGCCTG...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR CCA 90 bp | TTCCCTGCTGTGCTCCACGAAGTACAGATATCACTCACATCTCTAGTGCCTGCACACATCCCATCTCTGTaGCATCGTTTCTTTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FPAVLHEVQISLTSLVPAHIPSL*HRFFFL Trigger: GAGGAAAAAGAAACGATGCCACAGAGATGGGATGTG...TGCAGGCACTAGAGATGTGAGTGATATCTGTACTTCGTGGAGCACAGCAGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR CCA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCTTTGGAAGAGTAGGTaGCATCTTTCCACACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VTLKPAQMTRFHLLPCCALWKSR*HLSTLC Trigger: GCAAAGTGTGGAAAGATGCCACCTACTCTTCCAAAG...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR CCA 90 bp | AATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCACGAAGTACAGATATCACCATGGAGTCTGGCTTTaGAAGAGTAGGTGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: NDKVPPTSLLCSTKYRYHHGVWL*KSRWHL Trigger: AAGATGCCACCTACTCTTCCAAAGCCAGACTCCATG...GTGATATCTGTACTTCGTGGAGCACAGCAGGGAAGTAGGTGGAACCTTGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCATTCCTTATCACTGCTaGAAGGGTAGGCCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ITEALVVLWLLSTLLDSVIPYHC*KGRPAP Trigger: TGGGGCAGGCCTACCCTTGCAGCAGTGATAAGGAAT...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | TCATTCCCTGTTCTTCAGCGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGACACATTCCTTATCACTaGTGCAAGGGTAGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SFPVLQRSPCFRDPLRLRHIPYH*CKGRPA Trigger: GGCAGGCCTACCCTTGCAGCAGTGATAAGGAATGTG...TCTTAACCTAAGAGGATCTCTAAAACATGGGGAACGCTGAAGAACAGGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTATCCTCCTACAGAGCATaGAGGCTGATGATCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVSSYRA*RLMILG Trigger: ACCAAGGATCATCAGCCTGCATGCTCTGTAGGAGGA...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCGGCCTTCCTAGATTCTaGCATCCCAGGTCATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ITEALVVLWLLSTLLDSVGLPRF*HPRSWL Trigger: CAACCATGACCTGGGATGGCAGAATCTAGGAAGGCC...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS-3UTR GCA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCGATGGAGCACTGGTTTaGAGATTTTGGTCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFDGALV*RFWSRS Trigger: ACTTCTGGACCAAAATCTGCAAACCAGTGCTCCATC...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | GTCAGACAACTTCAGTGGTTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTACCTTGGTGGGGACTGTaGCAGTATCTTCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRQLQWFCNLRQFCPVLVPWWGL*QYLPTS Trigger: TGAAGTTGGAAGATACTGCCACAGTCCCCACCAAGG...TACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | AATGACAAGGTTCCACCTACTTCCCTGCTGTGCTCCACGAAGTACAGATATCACATCTTCTGGCATACATaGAGTCTGGCTTTGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDKVPPTSLLCSTKYRYHIFWHT*SLALEE Trigger: CTCTTCCAAAGCCAGACTCCATGTATGCCAGAAGAT...GTGATATCTGTACTTCGTGGAGCACAGCAGGGAAGTAGGTGGAACCTTGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | AGGCACATAACGGAAGCACTGGTAGTACTTTGGTTGTaGTCGACTCTACTTGATTCAGTCCTGCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHITEALVVLWL*STLLDSVLPSS Trigger: AGAAGAGGGCAGGACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTATGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | ATGAGGCACATAACGGAAGCACTGGTAGTACTTTGGTaGTTGTCGACTCTACTTGATTCAGTCCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRHITEALVVLW*LSTLLDSVLPS Trigger: AGAGGGCAGGACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTATGTGCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | CAGCTTACCTGCATGAGAGCAAATTTCATGGAGAGCTaGAACTTTGCTTCTGGAGCCTCTGATGGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLTCMRANFMES*NFASGASDGSH Trigger: ATGACTGCCATCAGAGGCTCCAGAAGCAAAGTTCAAGCTCTCCATGAAATTTGCTCTCATGCAGGTAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAACCAGTCCTTGGTTCATaGCTGCAGATCGGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGTHFVKSPHIEIILQPQPVLGS*LQIGWL Trigger: CAGCCAACCGATCTGCAGGCATGAACCAAGGACTGG...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAAGGTGCCATCCAGAGCTaGGATATGTGGGGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGTHFVKSPHIEIILQPQGAIQS*DMWGED Trigger: ATCCTCACCCCACATATCCCAGCTCTGGATGGCACC...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCTTATATGAGGCATCTTaGAGTGTGGCCTTCCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFLYEAS*SVAFLD Trigger: ATCTAGGAAGGCCACACTCCAAGATGCCTCATATAA...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTCAGCGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTCCTTCTTGCGTTGTTTaGTACAGACTTCCCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVLQRSPCFRDPLRLRESPSCVV*YRLPPD Trigger: ATCAGGGGGAAGTCTGTACCAAACAACGCAAGAAGG...ACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACGCTGAAGAACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | TTTTGCAATCTGAGACAATTCTGCCCTGTGCTTGTATaGCACATGATTAATGGCTCCAGCTCGAGCGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCNLRQFCPVLV*HMINGSSSSGN Trigger: ATTCCCGCTCGAGCTGGAGCCATTAATCATGTGCAATACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAACAGAGCTGGGATATGTaGGGTGAGGATGCTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGTHFVKSPHIEIILQPQQSWDM*GEDALS Trigger: ACTGAGAGCATCCTCACCCCACATATCCCAGCTCTG...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | TCATTCCCTGTTCTTCAGCGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAATCCCAGGTCATGGTTaGAATAGTGACCATGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPVLQRSPCFRDPLRLRIPGHG*NSDHGC Trigger: GCAACCATGGTCACTATTCCAACCATGACCTGGGAT...TCTTAACCTAAGAGGATCTCTAAAACATGGGGAACGCTGAAGAACAGGGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATAAAGGTATTTATCAGTATATCACAGATAGGGTATGTGCTCATCCCGCTGGTTTGCAGATTTTaGTCCAGAAGTGGCGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARIKVFISISQIGYVLIPLVCRF*SRSGEH Trigger: GTGCTCGCCACTTCTGGACCAAAATCTGCAAACCAG...CGGGATGAGCACATACCCTATCTGTGATATACTGATAAATACCTTTATCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR GCA 90 bp | CGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTGAGAGTAATTTAAAAATCTCCAGCCCGTaGGAACCCTTCTTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPCFRDPLRLRESESNLKISSP*EPFLRC Trigger: ACAACGCAAGAAGGGTTCGCACGGGCTGGAGATTTT...TAAATTACTCTCACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAACATCTTTCCACACTTTaGAGGACAGGCCCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGTHFVKSPHIEIILQPQHLSTL*RTGPLH Trigger: GTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATG...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | CTGAAGGAAATGCCCCCTACAGCTCTAGCCAAACTCTaGGAAAATCACATGGTATTCGTCAGTAATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKEMPPTALAKL*ENHMVFVSNFH Trigger: ATGGAAATTACTGACGAATACCATGTGATTTTCCAAGAGTTTGGCTAGAGCTGTAGGGGGCATTTCCTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | TCAGTTCTCCTCATGTGTCAGACAACTTCAGTGGTTTaGCAATCTGAGACAATTCTGCCCTGTGCTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLMCQTTSVV*QSETILPCACI Trigger: AATACAAGCACAGGGCAGAATTGTCTCAGATTGCAAAACCACTGAAGTTGTCTGACACATGAGGAGAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | TCATTCCCTGTTCTTCAGCGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGATGCTCTCAGTGACTaGGATGCAGATTCCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: SFPVLQRSPCFRDPLRLRDALSD*DADSII Trigger: AATAATGGAATCTGCATCCCAGTCACTGAGAGCATC...TCTTAACCTAAGAGGATCTCTAAAACATGGGGAACGCTGAAGAACAGGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTGAGAGTAATTTATCATGTCCTTTTATATaGGGCATCTTGGAGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPCFRDPLRLRESESNLSCPFI*GILECG Trigger: GCCACACTCCAAGATGCCTCATATAAAAGGACATGA...TAAATTACTCTCACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCCATGTTTTAGAGATCCTCTTAGGTTAAGAGAGAGTGAGAGTAATTTAATTTTGGTCCAGAAGTaGCGAGCACAACAAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPCFRDPLRLRESESNLILVQK*RAQQNP Trigger: TGGGTTTTGTTGTGCTCGCCACTTCTGGACCAAAAT...TAAATTACTCTCACTCTCTCTTAACCTAAGAGGATCTCTAAAACATGGGGAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| 3UTR CAA 72 bp | CACATTTATCCTTTTCTAGCCCATTGCCTTAACAACTaGGCCAGGACTACTGATTGTTTACCCTGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HIYPFLAHCLNN*ARTTDCLPCSY Trigger: ATAAGAACAGGGTAAACAATCAGTAGTCCTGGCCAAGTTGTTAAGGCAATGGGCTAGAAAAGGATAAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 90 bp | GGCTTTTGCCCTTCTTACTGCCGCCGAAAGCCAGTCCTTGGTTCATaGCTGCAGATCGGTTGGCTGACTGAGCAGGAGTCTCCCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GFCPSYCRRKPVLGS*LQIGWLTEQESPLL Trigger: TAGGAGGGGAGACTCCTGCTCAGTCAGCCAACCGATCTGCAGGCATGAACCAAGGACTGGCTTTCGGCGGCAGTAAGAAGGGCAAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS TCA 90 bp | AGCCCGTGCGAACCCTTCTTGCGTTGTTTGGTACAGACTTCCCCCTaGTGGAGCACTGGTTTGCAGATTTTGGTCCAGAAGTGGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCEPFLRCLVQTSP*WSTGLQILVQKWRA Trigger: TGCTCGCCACTTCTGGACCAAAATCTGCAAACCAGTGCTCCATCAGGGGGAAGTCTGTACCAAACAACGCAAGAAGGGTTCGCACGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 90 bp | CTAGATTCTGCCATCCCAGGTCATGGTTGGAATAGTGACCATGGTTaGGATCTCTATGCCGGGTGCCATCCAGAGCTGGGATATGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSAIPGHGWNSDHG*DLYAGCHPELGYVG Trigger: CCCCACATATCCCAGCTCTGGATGGCACCCGGCATAGAGATCGCAACCATGGTCACTATTCCAACCATGACCTGGGATGGCAGAATCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 90 bp | GGAAGAGTAGGTGGCATCTTTCCACACTTTGCAGGACAGGCCCTTTaGACAGTCACACCTCTGGAAAATCTCCAGCCCGTGCGAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRVGGIFPHFAGQAL*TVTPLENLQPVRTL Trigger: AAGGGTTCGCACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACCTACTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 90 bp | ATAGTGACCATGGTTGCGATCTCTATGCCGGGTGCCATCCAGAGCTaGGATATGTGGGGTGAGGATGCTCTCAGTGACTGGGATGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IVTMVAISMPGAIQS*DMWGEDALSDWDAD Trigger: ATCTGCATCCCAGTCACTGAGAGCATCCTCACCCCACATATCCCAGCTCTGGATGGCACCCGGCATAGAGATCGCAACCATGGTCACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 90 bp | TCTTGGAGTGTGGCCTTCCTAGATTCTGCCATCCCAGGTCATGGTTaGAATAGTGACCATGGTTGCGATCTCTATGCCGGGTGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSVAFLDSAIPGHG*NSDHGCDLYAGCHP Trigger: TGGATGGCACCCGGCATAGAGATCGCAACCATGGTCACTATTCCAACCATGACCTGGGATGGCAGAATCTAGGAAGGCCACACTCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | GTGACCTTAAAGCCTGCACAAATGACAAGGTTCCACCTACTTCCCTGCTGTGCTTTGATGGAGTTGAGTTaGGCCCGCGAGCTGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTLKPAQMTRFHLLPCCALMELS*ARELPS Trigger: GCTAGGCAGCTCGCGGGCCAAACTCAACTCCATCAA...AGCACAGCAGGGAAGTAGGTGGAACCTTGTCATTTGTGCAGGCTTTAAGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 90 bp | ATGGTTGCGATCTCTATGCCGGGTGCCATCCAGAGCTGGGATATGTaGGGTGAGGATGCTCTCAGTGACTGGGATGCAGATTCCATTATT | + |
|
Preference number: 5 (lower is better) Translates to: MVAISMPGAIQSWDM*GEDALSDWDADSII Trigger: AATAATGGAATCTGCATCCCAGTCACTGAGAGCATCCTCACCCCACATATCCCAGCTCTGGATGGCACCCGGCATAGAGATCGCAACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 90 bp | TCTTTCCACACTTTGCAGGACAGGCCCTTTGCACAGTCACACCTCTaGAAAATCTCCAGCCCGTGCGAACCCTTCTTGCGTTGTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFHTLQDRPFAQSHL*KISSPCEPFLRCLV Trigger: TACCAAACAACGCAAGAAGGGTTCGCACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCGAGGACTTGATGGAGTaGAGTTTGGCCCGCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFEDLME*SLAREL Trigger: CAGCTCGCGGGCCAAACTCAACTCCATCAAGTCCTC...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCGCCTGCCCCAGGCTTTaGCCCTTCTTACTGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ITEALVVLWLLSTLLDSVACPRL*PFLLPP Trigger: CGGCGGCAGTAAGAAGGGCAAAAGCCTGGGGCAGGC...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 90 bp | CATGGAGTCTGGCTTTGGAAGAGTAGGTGGCATCTTTCCACACTTTaGAGGACAGGCCCTTTGCACAGTCACACCTCTGGAAAATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGVWLWKSRWHLSTL*RTGPLHSHTSGKSP Trigger: TGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACCTACTCTTCCAAAGCCAGACTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 90 bp | ACATCCCATCTCTGTGGCATCGTTTCTTTTTCCTCCTACAGAGCATaGAGGCTGATGATCCTTGGTGGGGACTGTGGCAGTATCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TSHLCGIVSFSSYRA*RLMILGGDCGSIFQ Trigger: TTGGAAGATACTGCCACAGTCCCCACCAAGGATCATCAGCCTGCATGCTCTGTAGGAGGAAAAAGAAACGATGCCACAGAGATGGGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCCGAACCCTTCTTGCGTaGTTTGGTACAGACTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFRTLLA*FGTDFP Trigger: GGGGAAGTCTGTACCAAACAACGCAAGAAGGGTTCG...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCTGTGCTTCAGACATGTGACCTTAAAGCCTGCACAAATGACAAGGTTCCCGTGCGAACCCTTCTaGCGTTGTTTGGTACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSLCFRHVTLKPAQMTRFPCEPF*RCLVQT Trigger: AGTCTGTACCAAACAACGCAAGAAGGGTTCGCACGG...GAACCTTGTCATTTGTGCAGGCTTTAAGGTCACATGTCTGAAGCACAGGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCTGCAGGACAGGCCCTTaGCACAGTCACACCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITEALVVLWLLSTLLDSVCRTGP*HSHTSG Trigger: TCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCA...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCCCTCCTAGAGAGGACTaGATGGAGTTGAGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ITEALVVLWLLSTLLDSVPPRED*MELSLA Trigger: GGCCAAACTCAACTCCATCAAGTCCTCTCTAGGAGG...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | ATAACGGAAGCACTGGTAGTACTTTGGTTGTTGTCGACTCTACTTGATTCAGTCGCATCTTTCCACACTTaGCAGGACAGGCCCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITEALVVLWLLSTLLDSVASFHT*QDRPFA Trigger: TGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGC...GACTGAATCAAGTAGAGTCGACAACAACCAAAGTACTACCAGTGCTTCCGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS-3UTR CAA 90 bp | AAGGGAACCCACTTTGTAAAATCCCCTCATATTGAGATTATCTTACAGCCTCAAACTGGTTTGCAGATTTaGGTCCAGAAGTGGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KGTHFVKSPHIEIILQPQTGLQI*VQKWRA Trigger: TGCTCGCCACTTCTGGACCAAAATCTGCAAACCAGT...TTGAGGCTGTAAGATAATCTCAATATGAGGGGATTTTACAAAGTGGGTTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CAA 72 bp | GCAGGAGTCTCCCCTCCTAGAGAGGACTTGATGGAGTaGAGTTTGGCCCGCGAGCTGCCTAGCTGTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGVSPPREDLME*SLARELPSCEL Trigger: GAGCTCACAGCTAGGCAGCTCGCGGGCCAAACTCAACTCCATCAAGTCCTCTCTAGGAGGGGAGACTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 72 bp | TATCACTGCTGCAAGGGTAGGCCTGCCCCAGGCTTTTaGCCTTCTTACTGCCGCCGAAAGCCAGTCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: YHCCKGRPAPGF*PSYCRRKPVLG Trigger: ACCAAGGACTGGCTTTCGGCGGCAGTAAGAAGGGCAAAAGCCTGGGGCAGGCCTACCCTTGCAGCAGTGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 72 bp | CGAAAGCCAGTCCTTGGTTCATGCCTGCAGATCGGTTaGCTGACTGAGCAGGAGTCTCCCCTCCTAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKPVLGSCLQIG*LTEQESPLLER Trigger: CCTCTCTAGGAGGGGAGACTCCTGCTCAGTCAGCCAACCGATCTGCAGGCATGAACCAAGGACTGGCTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 72 bp | CCTTCTTACTGCCGCCGAAAGCCAGTCCTTGGTTCATaGCTGCAGATCGGTTGGCTGACTGAGCAGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSYCRRKPVLGS*LQIGWLTEQES Trigger: AGACTCCTGCTCAGTCAGCCAACCGATCTGCAGGCATGAACCAAGGACTGGCTTTCGGCGGCAGTAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 72 bp | GCCATCCCAGGTCATGGTTGGAATAGTGACCATGGTTaGGATCTCTATGCCGGGTGCCATCCAGAGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AIPGHGWNSDHG*DLYAGCHPELG Trigger: TCCCAGCTCTGGATGGCACCCGGCATAGAGATCGCAACCATGGTCACTATTCCAACCATGACCTGGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS CCA 72 bp | ATGGTTGCGATCTCTATGCCGGGTGCCATCCAGAGCTaGGATATGTGGGGTGAGGATGCTCTCAGTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: MVAISMPGAIQS*DMWGEDALSDW Trigger: CCAGTCACTGAGAGCATCCTCACCCCACATATCCCAGCTCTGGATGGCACCCGGCATAGAGATCGCAACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
||
| CDS GCA 72 bp | GGTGGCATCTTTCCACACTTTGCAGGACAGGCCCTTTaGACAGTCACACCTCTGGAAAATCTCCAGCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: GGIFPHFAGQAL*TVTPLENLQPV Trigger: CACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CCA 72 bp | ACTTTGCAGGACAGGCCCTTTGCACAGTCACACCTCTaGAAAATCTCCAGCCCGTGCGAACCCTTCTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: TLQDRPFAQSHL*KISSPCEPFLR Trigger: ACGCAAGAAGGGTTCGCACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CAA 72 bp | CTGGAAAATCTCCAGCCCGTGCGAACCCTTCTTGCGTaGTTTGGTACAGACTTCCCCCTGATGGAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LENLQPVRTLLA*FGTDFPLMEHW Trigger: CCAGTGCTCCATCAGGGGGAAGTCTGTACCAAACAACGCAAGAAGGGTTCGCACGGGCTGGAGATTTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CAA 90 bp | TGTGGGGTGAGGATGCTCTCAGTGACTGGGATGCAGATTCCATTATaGCAGCGGGTACCAGGGCAACACATCCCATCTCTGTGGCATCGT | + |
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Preference number: 6 (lower is better) Translates to: CGVRMLSVTGMQIPL*QRVPGQHIPSLWHR Trigger: ACGATGCCACAGAGATGGGATGTGTTGCCCTGGTACCCGCTGCAATAATGGAATCTGCATCCCAGTCACTGAGAGCATCCTCACCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CAA 90 bp | TGGAAGAGTAGGTGGCATCTTTCCACACTTTGCAGGACAGGCCCTTaGCACAGTCACACCTCTGGAAAATCTCCAGCCCGTGCGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: WKSRWHLSTLCRTGP*HSHTSGKSPARANP Trigger: AGGGTTCGCACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACCTACTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CCA 72 bp | GTGGCCTTCCTAGATTCTGCCATCCCAGGTCATGGTTaGAATAGTGACCATGGTTGCGATCTCTATGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VAFLDSAIPGHG*NSDHGCDLYAG Trigger: CCCGGCATAGAGATCGCAACCATGGTCACTATTCCAACCATGACCTGGGATGGCAGAATCTAGGAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS GCA 72 bp | TGGCTTTGGAAGAGTAGGTGGCATCTTTCCACACTTTaGAGGACAGGCCCTTTGCACAGTCACACCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: WLWKSRWHLSTL*RTGPLHSHTSG Trigger: TCCAGAGGTGTGACTGTGCAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACCTACTCTTCCAAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CAA 72 bp | AGGATGCTCTCAGTGACTGGGATGCAGATTCCATTATaGCAGCGGGTACCAGGGCAACACATCCCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RMLSVTGMQIPL*QRVPGQHIPSL Trigger: CAGAGATGGGATGTGTTGCCCTGGTACCCGCTGCAATAATGGAATCTGCATCCCAGTCACTGAGAGCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS GCA 72 bp | TTTGCACAGTCACACCTCTGGAAAATCTCCAGCCCGTaGGAACCCTTCTTGCGTTGTTTGGTACAGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: FAQSHLWKISSP*EPFLRCLVQTS Trigger: GGAAGTCTGTACCAAACAACGCAAGAAGGGTTCGCACGGGCTGGAGATTTTCCAGAGGTGTGACTGTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS CCA 72 bp | TCTGGCATACATGGAGTCTGGCTTTGGAAGAGTAGGTaGCATCTTTCCACACTTTGCAGGACAGGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGIHGVWLWKSR*HLSTLCRTGPL Trigger: CAAAGGGCCTGTCCTGCAAAGTGTGGAAAGATGCCACCTACTCTTCCAAAGCCAGACTCCATGTATGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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| CDS TCA 72 bp | GAACCCTTCTTGCGTTGTTTGGTACAGACTTCCCCCTaGTGGAGCACTGGTTTGCAGATTTTGGTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: EPFLRCLVQTSP*WSTGLQILVQK Trigger: CTTCTGGACCAAAATCTGCAAACCAGTGCTCCATCAGGGGGAAGTCTGTACCAAACAACGCAAGAAGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029665.7 |
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