RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DISP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040035

Ensembl transcript IDs: ENSMUST00000037547.9, ENSMUST00000063975.10, ENSMUST00000110843.2, ENSMUST00000110846.8

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGCAGCAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTaGCAGTGCTCGGCGGGGTCTCTCAGTCCCAGGCACTGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: PAAAANWSLRHFPCV*QCSAGSLSPRHCSP
Trigger: GGGGCTGCAGTGCCTGGGACTGAGAGACCCCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR CCA 90 bp GTGGCACAGAACCGTAGCAGGGCCAATGTGCGGTCTGTATCGGCTTaGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGA +
Preference number: 1 (lower is better)
Translates to: VAQNRSRANVRSVSA*VVSWQEERLDSTAR
Trigger: TCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGACCGCACATTGGCCCTGCTACGGTTCTGTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CCA 90 bp AAAATCAACAACACAGCCCTGCGTGGCACGTGGGCCTGGGACAGGTaGCAGGAAGCAGGCTCCATACCCCCTGCAAGGACCTTCAGCATC +
Preference number: 1 (lower is better)
Translates to: KINNTALRGTWAWDR*QEAGSIPPARTFSI
Trigger: GATGCTGAAGGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTGCCACGCAGGGCTGTGTTGTTGATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR TCA 90 bp GGTCAGGGTCGTGGAGAACCCCCAGCCCTTCTTTCCCTGGGTTACTaGAGGCCTCTTAAGGCCAGAACTTCCTCTTGCCACCGTGTGCCT +
Preference number: 1 (lower is better)
Translates to: GQGRGEPPALLSLGY*RPLKARTSSCHRVP
Trigger: AGGCACACGGTGGCAAGAGGAAGTTCTGGCCTTAAGAGGCCTTCAGTAACCCAGGGAAAGAAGGGCTGGGGGTTCTCCACGACCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 90 bp CACGTGGGCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTaGAAGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTCTCC +
Preference number: 1 (lower is better)
Translates to: HVGLGQVAGSRLHTP*KDLQHLDRKIPDLS
Trigger: GGAGAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR CCA 90 bp CCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTaGGTAACTGCCAGAAGCAAAGGACCAAGACAGCCAGGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PRGGRAHKERLKQRD*VTARSKGPRQPGAQ
Trigger: CTGGGCCCCTGGCTGTCTTGGTCCTTTGCTTCTGGCAGTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp GAGAGACTTGGTGCAAAGGCTGAAAATCAACAACACAGCCCTGCGTaGCACGTGGGCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACC +
Preference number: 1 (lower is better)
Translates to: ERLGAKAENQQHSPA*HVGLGQVAGSRLHT
Trigger: GGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTGCCACGCAGGGCTGTGTTGTTGATTTTCAGCCTTTGCACCAAGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR GCA 90 bp TTGTCACCCGGGAGACAGCTGATCAGCCTCCCCAATACCTGGAACTaGACATCTGGCCTCCCTCCTTTCCAGAGTAGGGGTCCTTGTTGG +
Preference number: 1 (lower is better)
Translates to: LSPGRQLISLPNTWN*TSGLPPFQSRGPCW
Trigger: CCAACAAGGACCCCTACTCTGGAAAGGAGGGAGGCCAGATGTGCAGTTCCAGGTATTGGGGAGGCTGATCAGCTGTCTCCCGGGTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp GGAGAGCTTCTAGTCACACTGGTGAGTGTGAGCAGAACAGGACAGTaGAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCC +
Preference number: 1 (lower is better)
Translates to: GELLVTLVSVSRTGQ*RTEARVHFQPREAS
Trigger: GGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCTCACACTCACCAGTGTGACTAGAAGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp CTCTCAGTCCCAGGCACTGCAGCCCCTGGGAAACCAGAGTATACCTaGAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTGGCATGAAGAG +
Preference number: 1 (lower is better)
Translates to: LSVPGTAAPGKPEYT*RKNLPLCREAWHEE
Trigger: CTCTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTTCCCAGGGGCTGCAGTGCCTGGGACTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR CCA 90 bp AACTTCTTGTCACCCGGGAGACAGCTGATCAGCCTCCCCAATACCTaGAACTGCACATCTGGCCTCCCTCCTTTCCAGAGTAGGGGTCCT +
Preference number: 1 (lower is better)
Translates to: NFLSPGRQLISLPNT*NCTSGLPPFQSRGP
Trigger: AGGACCCCTACTCTGGAAAGGAGGGAGGCCAGATGTGCAGTTCCAGGTATTGGGGAGGCTGATCAGCTGTCTCCCGGGTGACAAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp AAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTaGAGGTGGAGGCCCCAAGGGGAGGGAGGGCTCACAAAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: KEMRNSPVYSDYNSF*RWRPQGEGGLTKRG
Trigger: GCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp GCACTGCAGCCCCTGGGAAACCAGAGTATACCTGCAGGAAAAACCTaGCTCTGTGCAGAGAGGCTTGGCATGAAGAGAGACTTGGTGCAA +
Preference number: 1 (lower is better)
Translates to: ALQPLGNQSIPAGKT*LCAERLGMKRDLVQ
Trigger: TTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTTCCCAGGGGCTGCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR TCA 90 bp CCTCCTTTCCAGAGTAGGGGTCCTTGTTGGCACTGTGGGGACAGATaGGTCCTTAGTTGGTCACAGGGAGAGCCTGGTATTACCTTGCAA +
Preference number: 1 (lower is better)
Translates to: PPFQSRGPCWHCGDR*VLSWSQGEPGITLQ
Trigger: TTGCAAGGTAATACCAGGCTCTCCCTGTGACCAACTAAGGACTCATCTGTCCCCACAGTGCCAACAAGGACCCCTACTCTGGAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp CTTCATGCCAAGATCTATGGATATTCCCAGGGACCTGGAGACCCCTaGAGATCTGCACTAGAAAGGGAAGCTGAGCTAGCAGCACCCCTA +
Preference number: 1 (lower is better)
Translates to: LHAKIYGYSQGPGDP*RSALEREAELAAPL
Trigger: TAGGGGTGCTGCTAGCTCAGCTTCCCTTTCTAGTGCAGATCTCCAGGGGTCTCCAGGTCCCTGGGAATATCCATAGATCTTGGCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 90 bp AGCATAACTGAATTGCCACTGCTTGGATTGACAAGGCTGCAGTCTTaGAGCCTAGAGTCTCTACTTCCCGGGGCCAGCGTCTCTTCCACA +
Preference number: 1 (lower is better)
Translates to: SITELPLLGLTRLQS*SLESLLPGASVSST
Trigger: TGTGGAAGAGACGCTGGCCCCGGGAAGTAGAGACTCTAGGCTTCAAGACTGCAGCCTTGTCAATCCAAGCAGTGGCAATTCAGTTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 90 bp CGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCTCTGTCCTaGTTTTGGAGAGCTTCTAGTCACACTGGTGAGTGTGAGCAGAAC +
Preference number: 1 (lower is better)
Translates to: RPSCLLLLSCHPPLS*FWRASSHTGECEQN
Trigger: GTTCTGCTCACACTCACCAGTGTGACTAGAAGCTCTCCAAAAGCAGGACAGAGGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp CATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTaGAAAGGGCACCAGCAGCAGCTGCTAACTGGAGCCTCAGGCACT +
Preference number: 1 (lower is better)
Translates to: HGKASLRKKFLNALP*KGHQQQLLTGASGT
Trigger: AGTGCCTGAGGCTCCAGTTAGCAGCTGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR CCA 90 bp TCCTGTCTCCTGCTTCTCTCTTGTCATCCACCTCTGTCCTGCTTTTaGAGAGCTTCTAGTCACACTGGTGAGTGTGAGCAGAACAGGACA +
Preference number: 1 (lower is better)
Translates to: SCLLLLSCHPPLSCF*RASSHTGECEQNRT
Trigger: TGTCCTGTTCTGCTCACACTCACCAGTGTGACTAGAAGCTCTCCAAAAGCAGGACAGAGGTGGATGACAAGAGAGAAGCAGGAGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp CAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATaGAGGTGTTCAGTAAACTTGCAGATGGTGCCTGGTGTCTTGAGC +
Preference number: 1 (lower is better)
Translates to: QFSVPCLSPLQHPFQ*RCSVNLQMVPGVLS
Trigger: GCTCAAGACACCAGGCACCATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp ACTTACAGGGGAACATTCTGGAGTCAGCGTCCTATGGGGGAATCTTaGAATTTAGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: TYRGTFWSQRPMGES*NLGILQSRPSCLLL
Trigger: AAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCTAAATTCCAAGATTCCCCCATAGGACGCTGACTCCAGAATGTTCCCCTGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp ACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGGTGCCTaGTGTCTTGAGCTGTGTCACATGAGTGCTTTGGGTGGAGAAAGC +
Preference number: 1 (lower is better)
Translates to: TPFPMQVFSKLADGA*CLELCHMSALGGES
Trigger: GCTTTCTCCACCCAAAGCACTCATGTGACACAGCTCAAGACACCAGGCACCATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 90 bp CCAGAGTATACCTGCAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTaGCATGAAGAGAGACTTGGTGCAAAGGCTGAAAATCAACAACAC +
Preference number: 1 (lower is better)
Translates to: PEYTCRKNLPLCREA*HEERLGAKAENQQH
Trigger: GTGTTGTTGATTTTCAGCCTTTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR TCA 90 bp AGTAGGCATCTCAGAGAGTTTCAGAGCGGGGAAACTCAAAGGAAATaGGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGT +
Preference number: 1 (lower is better)
Translates to: SRHLREFQSGETQRK*GTLRSTQTTTLSGG
Trigger: ACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGAGTTTCCCCGCTCTGAAACTCTCTGAGATGCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 90 bp CTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTaGTCCACTTGTCCTGGGCTACTTGGGGTGGGAGATAGGTCTCAA +
Preference number: 1 (lower is better)
Translates to: LSSVFPTFLCSHLSF*STCPGLLGVGDRSQ
Trigger: TTGAGACCTATCTCCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 90 bp AGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTaGGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGAGATA +
Preference number: 1 (lower is better)
Translates to: RENCLLSFPHSYVLI*VSAPLVLGYLGWEI
Trigger: TATCTCCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 90 bp ATATGGGGCAGTGAGAGATTAAGAAGTTACATACCAAATGAACCCTaGGCTGGCCTTGAACTCAGGCATTTGAGGGCAGAACACATATTC +
Preference number: 1 (lower is better)
Translates to: IWGSERLRSYIPNEP*AGLELRHLRAEHIF
Trigger: GAATATGTGTTCTGCCCTCAAATGCCTGAGTTCAAGGCCAGCTCAGGGTTCATTTGGTATGTAACTTCTTAATCTCTCACTGCCCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 90 bp AGAGCACTTTGCATTACTGGTTTTAGCAGCAAACACTTCCACAGATaGCTCTGTATATGGTTCTCCAGCAGCATAACTGAATTGCCACTG +
Preference number: 1 (lower is better)
Translates to: RALCITGFSSKHFHR*LCIWFSSSITELPL
Trigger: CAGTGGCAATTCAGTTATGCTGCTGGAGAACCATATACAGAGGCATCTGTGGAAGTGTTTGCTGCTAAAACCAGTAATGCAAAGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 90 bp CCCTATAAAGGGCATACTATTGTCCCTATTTCATATTTACAGGGCTaGGGATGTAGCTCAGTAATAGAGCATGTACTTAGTCCATTCAAG +
Preference number: 1 (lower is better)
Translates to: PYKGHTIVPISYLQG*GCSSVIEHVLSPFK
Trigger: CTTGAATGGACTAAGTACATGCTCTATTACTGAGCTACATCCTCAGCCCTGTAAATATGAAATAGGGACAATAGTATGCCCTTTATAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATAAGCCTCCCCAATACCTaGAACTGCACATCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SQGPRALKLTLRRRQGAISLPNT*NCTSGL
Trigger: GAGGCCAGATGTGCAGTTCCAGGTATTGGGGAGGCT...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCGGCAAAGCTCCCACCTaGGAGTCAGATGCCCCACTC +
Preference number: 2 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSGKAPT*ESDAPL
Trigger: GAGTGGGGCATCTGACTCCCAGGTGGGAGCTTTGCC...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCAGGGGCCCAGGGCCCTaGAGCTCACACTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGRGPGP*SSHSGG
Trigger: TCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR GCA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGCTCAATGCACTTCCCTaGAAAGGGCACCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: QLLTGASGTSHVCDSARRLNALP*KGHQQQ
Trigger: CTGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAG...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR-3UTR TCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCGCAAGGCCCTCCCACTaGATCCTCCAGATGCAGGGG +
Preference number: 2 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVARPSH*ILQMQG
Trigger: CCCCTGCATCTGGAGGATTCAGTGGGAGGGCCTTGC...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp GCACGGCCAGATAGTTGCCCAAGGACCAGCTGGGGCAGCACTCATTGGCTGCTGACCTTAACCCTGTCTTaGGCTCTCTCACCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: ARPDSCPRTSWGSTHWLLTLTLS*ALSPLV
Trigger: GACAAGAGGTGAGAGAGCTCAAGACAGGGTTAAGGT...CAGCAGCCAATGAGTGCTGCCCCAGCTGGTCCTTGGGCAACTATCTGGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCAGCCCCAAAACTGATGTaGGAGCGGATCTGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPAPKLM*ERICRA
Trigger: TGCCCTACAGATCCGCTCTCACATCAGTTTTGGGGC...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCTTGGCTGCTGATCGCTaGCACAGAGCCCCAAAACTG +
Preference number: 2 (lower is better)
Translates to: SVSAWVVSWQEERLDSTALAADR*HRAPKL
Trigger: CAGTTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAA...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAAATACCAAATGAACCCTaGGCTGGCCTTGAACTCAGG +
Preference number: 2 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKIPNEP*AGLELR
Trigger: CCTGAGTTCAAGGCCAGCTCAGGGTTCATTTGGTAT...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR GCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAACCTCTTGCCACCGTGTaGCTCCTTTCCTTTTTAACC +
Preference number: 2 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKPLATV*LLSFLT
Trigger: GGTTAAAAAGGAAAGGAGGCACACGGTGGCAAGAGG...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCATATCAAAGGCAAGCCTaGGGAGGTTTCCCCAGACCT +
Preference number: 2 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPYQRQA*GGFPRP
Trigger: AGGTCTGGGGAAACCTCCCCAGGCTTGCCTTTGATA...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCATGCCACTGCTTGGATTaGCAAGGCTGCAGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPCHCLD*QGCSLE
Trigger: TTCAAGACTGCAGCCTTGTCAATCCAAGCAGTGGCA...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCACACCTCTTGTCATGCTaGAGGGCAGAGAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPHLLSC*RAESKY
Trigger: ATACTTGCTCTCTGCCCTTCAGCATGACAAGAGGTG...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCAACTCTTTCTGGAGGTaGAGGCCCCAAGGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVNSFWR*RPQGEG
Trigger: TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTT...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp ATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCAGGGGCAAGAGACCAGGGAGCTaGAAGCAAGCAGTAGAAGAC +
Preference number: 2 (lower is better)
Translates to: ICRAHRSGGVKLRGKSRGKRPGS*KQAVED
Trigger: GTCTTCTACTGCTTGCTTCCAGCTCCCTGGTCTCTT...GCCCCTGGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTCACTGTGGGGACAGATaGGTCCTTAGTTGGTCACAG +
Preference number: 2 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPHCGDR*VLSWSQ
Trigger: CTGTGACCAACTAAGGACTCATCTGTCCCCACAGTG...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCACAAGGCTGCAGTCTTaGAGCCTAGAGTCTCTACTT +
Preference number: 2 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSTRLQS*SLESLL
Trigger: AAGTAGAGACTCTAGGCTTCAAGACTGCAGCCTTGT...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCATGCTCTGGACATTGTaGTGTGACACAAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: SVSAWVVSWQEERLDSTAMLWTL*CDTRDL
Trigger: CAAGTCCCTTGTGTCACATCACAATGTCCAGAGCAT...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR GCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCAGCAGAACAGGACAGTaGAGGACAGAGGCCCGTGTT +
Preference number: 2 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGSRTGQ*RTEARV
Trigger: AACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR GCA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGAAACCAGAGTATACCTaGAGGAAAAACCTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QLLTGASGTSHVCDSARRKPEYT*RKNLPL
Trigger: CAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTT...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR CAA 90 bp CCAACTGGATCCCAAAGATGGAGTACCTTAGCGTCACTGAACTTCTaGTCACCCGGGAGACAGCTGATCAGCCTCCCCAATACCTGGAAC +
Preference number: 2 (lower is better)
Translates to: PTGSQRWSTLASLNF*SPGRQLISLPNTWN
Trigger: GTTCCAGGTATTGGGGAGGCTGATCAGCTGTCTCCCGGGTGACAAGAAGTTCAGTGACGCTAAGGTACTCCATCTTTGGGATCCAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 90 bp GGAAAAACCTGCCTCTGTGCAGAGAGGCTTGGCATGAAGAGAGACTaGGTGCAAAGGCTGAAAATCAACAACACAGCCCTGCGTGGCACG +
Preference number: 2 (lower is better)
Translates to: GKTCLCAERLGMKRD*VQRLKINNTALRGT
Trigger: CGTGCCACGCAGGGCTGTGTTGTTGATTTTCAGCCTTTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR-3UTR CCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGACTCAAGCAAAGAGACTaGGTAACTGCCAGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGLKQRD*VTARSK
Trigger: TTTGCTTCTGGCAGTTACCCAGTCTCTTTGCTTGAG...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGACTACAACTCTTTCTaGAGGTGGAGGCCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGDYNSF*RWRPQG
Trigger: CCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTC...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTCATGAGTGCTTTGGGTaGAGAAAGCTAATGGCCCTG +
Preference number: 2 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPHECFG*RKLMAL
Trigger: CAGGGCCATTAGCTTTCTCCACCCAAAGCACTCATG...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAAAGCCTCCAGCAGAATTaGAATAGTTTTCTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKSLQQN*NSFLSR
Trigger: CCTGCTTAGAAAACTATTCCAATTCTGCTGGAGGCT...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGCCAGGGTCAGGGTCGTaGAGAACCCCCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLPGSGS*RTPSPS
Trigger: AGAAGGGCTGGGGGTTCTCCACGACCCTGACCCTGG...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCTTAACCAGTGTCTTCTaGTGCTCTGGACATTGTGAT +
Preference number: 2 (lower is better)
Translates to: SVSAWVVSWQEERLDSTALTSVF*CSGHCD
Trigger: ATCACAATGTCCAGAGCATCAGAAGACACTGGTTAA...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CAA 90 bp CACTTACAGGGGAACATTCTGGAGTCAGCGTCCTATGGGGGAATCTaGGAATTTAGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: HLQGNILESASYGGI*EFRDTPKPTFLSPA
Trigger: AGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCTAAATTCCAAGATTCCCCCATAGGACGCTGACTCCAGAATGTTCCCCTGTAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 90 bp AATTGGAATAGTTTTCTAAGCAGGAAGAGCTCTCCTCAGTCCACCTaGGCAGTCCTGGCTAAGCAGTATCCCACGGGAACTGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: NWNSFLSRKSSPQST*AVLAKQYPTGTGSF
Trigger: GAAGGACCCAGTTCCCGTGGGATACTGCTTAGCCAGGACTGCCAAGGTGGACTGAGGAGAGCTCTTCCTGCTTAGAAAACTATTCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCGGTTTTTCTAGTCAGTaGGATACTCCAACTGGATCC +
Preference number: 2 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCGFSSQ*DTPTGS
Trigger: GGATCCAGTTGGAGTATCTCACTGACTAGAAAAACC...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR GCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCGCTGTGTCACATGAGTaGTTTGGGTGGAGAAAGCTA +
Preference number: 2 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVAVSHE*FGWRKL
Trigger: TAGCTTTCTCCACCCAAAGCACTCATGTGACACAGC...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp CTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGTCACCAACAGGGTTGTaGACCCTGGTCTGGCCTTCC +
Preference number: 2 (lower is better)
Translates to: LSPLQHPFQCRCSVNLQMSPTGL*TLVWPS
Trigger: GGAAGGCCAGACCAGGGTCCACAACCCTGTTGGTGA...CATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCGCAGCAGCTGCTAACTaGAGCCTCAGGCACTTCCCA +
Preference number: 2 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGAAAAN*SLRHFP
Trigger: TGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTGCTGC...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR-3UTR CCA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCACTAGTAACTCTATCTTaGCTTTATCAAAGGCAAGCC +
Preference number: 2 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPLVTLS*LYQRQA
Trigger: GGCTTGCCTTTGATAAAGCCAAGATAGAGTTACTAG...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp TCAGTCCCAGGCACTGCAGCCCCTGGGAAACCAGAGTATACCTGCAGGAAAAACAGGACCTTCAGCATCTaGACAGAAAGATTCCTGATC +
Preference number: 2 (lower is better)
Translates to: SVPGTAAPGKPEYTCRKNRTFSI*TERFLI
Trigger: GATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCT...GTTTTTCCTGCAGGTATACTCTGGTTTCCCAGGGGCTGCAGTGCCTGGGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR-3UTR TCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTAAGCTTCCCAAGAACTaGAGTGTCCCGATTAAGAGC +
Preference number: 2 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGKLPKN*SVPIKS
Trigger: GCTCTTAATCGGGACACTTCAGTTCTTGGGAAGCTT...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp CAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTGGAGAACCCCCAGCCCTTCTACACATATGGGGCAGTaGGAGATTAAGAAGTTACAT +
Preference number: 2 (lower is better)
Translates to: QAVEDIPGSGSWRTPSPSTHMGQ*EIKKLH
Trigger: ATGTAACTTCTTAATCTCTCACTGCCCCATATGTGT...AGAAGGGCTGGGGGTTCTCCACGACCCTGACCCTGGAATGTCTTCTACTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR GCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGGCCAGAACTTCCTCTTaGCACCGTGTGCCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLARTSS*HRVPPF
Trigger: GAAAGGAGGCACACGGTGGCAAGAGGAAGTTCTGGC...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGTACTTTCCTTTGCCCTaGCCCAACCCAGAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLYFPLP*PNPEPP
Trigger: TGGAGGCTCTGGGTTGGGCCAGGGCAAAGGAAAGTA...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGGCTTGGGTAGTGTCTTaGCAGGAGGAGCGGTTAGAC +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLAWVVS*QEERLD
Trigger: GTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGC...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR TCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCCCGATTAAGAGCCAATaGGAAGGGATGAGATTCAAT +
Preference number: 2 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTPIKSQ*EGMRFN
Trigger: ATTGAATCTCATCCCTTCTCATTGGCTCTTAATCGG...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR GCA 90 bp TCCTGCAGCCCCTCCCTGCCAGCTTTGCAACTTCCTAAGTCAGGAATGGGAATAAAACACTTCCACAGATaGCTCTGTATATGGTTCTCC +
Preference number: 2 (lower is better)
Translates to: SCSPSLPALQLPKSGMGIKHFHR*LCIWFS
Trigger: GGAGAACCATATACAGAGGCATCTGTGGAAGTGTTT...TATTCCCATTCCTGACTTAGGAAGTTGCAAAGCTGGCAGGGAGGGGCTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGTGCTTCCGGTACACTTaGCAGGAACTTGGGCACAAA +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLCFRYT*QELGHK
Trigger: TTTGTGCCCAAGTTCCTGCCAAGTGTACCGGAAGCA...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CAA 90 bp AGTGACATGACTTTGGGGGACAATCAATCAACCATTCTCAGTGTCTaGACCAACTGCAGGCCACTGTGGAGTAACTTTGCAAAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: SDMTLGDNQSTILSV*TNCRPLWSNFAKVQ
Trigger: TTGGACCTTTGCAAAGTTACTCCACAGTGGCCTGCAGTTGGTCAAGACACTGAGAATGGTTGATTGATTGTCCCCCAAAGTCATGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp GCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGACTTGGTGCAAAGGCTaGAAATCAACAACACAGCCC +
Preference number: 2 (lower is better)
Translates to: AWESLSQKEISQCTSLQRTWCKG*KSTTQP
Trigger: GGGCTGTGTTGTTGATTTTCAGCCTTTGCACCAAGT...CCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR-3UTR GCA 90 bp GTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCATCCACCTCTGTCCTaGTTTTGGAGAGCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: VFPTFLCSHLSFCSTCPGHPPLS*FWRASS
Trigger: ACTAGAAGCTCTCCAAAAGCAGGACAGAGGTGGATG...CCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATAGAGCACTCTGCCACTaGTCAGTGACACCGTCAAGC +
Preference number: 2 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHRALCH*SVTPSS
Trigger: GCTTGACGGTGTCACTGATCAGTGGCAGAGTGCTCT...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR TCA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGTTGAACTCAGGCATTTaGGGGCAGAACACATATTCT +
Preference number: 2 (lower is better)
Translates to: MSRREEVFIMGRKSRANLLNSGI*GQNTYS
Trigger: AGAATATGTGTTCTGCCCTCAAATGCCTGAGTTCAA...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTCCTTCGTACCTCTTCTaGCAAAGCCTGTCTGTACTC +
Preference number: 2 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSPSYLF*QSLSVL
Trigger: GAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR GCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCAAAGAAATTTCTCAATaGACTTCCCTGCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGKEISQ*TSLQRA
Trigger: TGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTT...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR-3UTR CCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATGGCTCTAGGCTAGTGTaGCATCTGCCTTATCTTCAC +
Preference number: 2 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHGSRLV*HLPYLH
Trigger: GTGAAGATAAGGCAGATGCCACACTAGCCTAGAGCC...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGAGATTCAATAGGCTGTaGAGGTTCTTAAGGGTTTTT +
Preference number: 2 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWRRFNRL*RFLRVF
Trigger: AAAAACCCTTAAGAACCTCCACAGCCTATTGAATCT...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CCA 90 bp GTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGTACTCCTATATAAAATaGCCTAGATTGGTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: VFPTFLCSHLSFCSTCPGYSYIK*PRLVVF
Trigger: GAAGACCACCAATCTAGGCCATTTTATATAGGAGTA...CCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp AACACAGCCCTGCGTGGCACGTGGGCCTGGGACAGGTaGCAGGAAGCAGGCTCCATACCCCCTGCAAGGACC +
Preference number: 3 (lower is better)
Translates to: NTALRGTWAWDR*QEAGSIPPART
Trigger: GGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTGCCACGCAGGGCTGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR TCA 72 bp GCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTaGCAGTGCTCGGCGGGGTCTCTCAGTCCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: AANWSLRHFPCV*QCSAGSLSPRH
Trigger: GTGCCTGGGACTGAGAGACCCCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR TCA 72 bp GAGAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTaGAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACC +
Preference number: 3 (lower is better)
Translates to: ESGSVGHTGVGE*SSEGNPGAQVT
Trigger: GGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CCA 72 bp GGTGCAAAGGCTGAAAATCAACAACACAGCCCTGCGTaGCACGTGGGCCTGGGACAGGTGGCAGGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GAKAENQQHSPA*HVGLGQVAGSR
Trigger: CCTGCTTCCTGCCACCTGTCCCAGGCCCACGTGCCACGCAGGGCTGTGTTGTTGATTTTCAGCCTTTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR-3UTR CAA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCTTAGCCTACTTTCCTTaGCCCTGGCCCAACCCAGAG +
Preference number: 3 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSLAYFP*PWPNPE
Trigger: CTCTGGGTTGGGCCAGGGCAAAGGAAAGTAGGCTAA...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp CAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTGGAGAACCCCCAGCCCTTCTGGCCAGAACTTCCTCTaGCCACCGTGTGCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: QAVEDIPGSGSWRTPSPSGQNFL*PPCASF
Trigger: AAAGGAGGCACACGGTGGCAAGAGGAAGTTCTGGCC...AGAAGGGCTGGGGGTTCTCCACGACCCTGACCCTGGAATGTCTTCTACTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 72 bp GGGAGACAGCTGATCAGCCTCCCCAATACCTGGAACTaGACATCTGGCCTCCCTCCTTTCCAGAGTAGGGGT +
Preference number: 3 (lower is better)
Translates to: GRQLISLPNTWN*TSGLPPFQSRG
Trigger: ACCCCTACTCTGGAAAGGAGGGAGGCCAGATGTGCAGTTCCAGGTATTGGGGAGGCTGATCAGCTGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp TCACCCGGGAGACAGCTGATCAGCCTCCCCAATACCTaGAACTGCACATCTGGCCTCCCTCCTTTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: SPGRQLISLPNT*NCTSGLPPFQS
Trigger: ACTCTGGAAAGGAGGGAGGCCAGATGTGCAGTTCCAGGTATTGGGGAGGCTGATCAGCTGTCTCCCGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp AGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTaGAGGTGGAGGCCCCAAGGGGAGGGAGGGCTCACA +
Preference number: 3 (lower is better)
Translates to: RNSPVYSDYNSF*RWRPQGEGGLT
Trigger: TGTGAGCCCTCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp ATCCCTCTCCACGAGATCTTCCCGGTCACCTATTGCTaGGCACCTGAGCTCGGCAGTAACCCTGACCCACTA +
Preference number: 3 (lower is better)
Translates to: IPLHEIFPVTYC*APELGSNPDPL
Trigger: TAGTGGGTCAGGGTTACTGCCGAGCTCAGGTGCCCAGCAATAGGTGACCGGGAAGATCTCGTGGAGAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp GCAGGAAGAGCTCTCCTCAGTCCACCTTGGCAGTCCTaGCTAAGCAGTATCCCACGGGAACTGGGTCCTTCA +
Preference number: 3 (lower is better)
Translates to: AGRALLSPPWQS*LSSIPRELGPS
Trigger: TGAAGGACCCAGTTCCCGTGGGATACTGCTTAGCCAGGACTGCCAAGGTGGACTGAGGAGAGCTCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CCA 72 bp AACCGTAGCAGGGCCAATGTGCGGTCTGTATCGGCTTaGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGC +
Preference number: 3 (lower is better)
Translates to: NRSRANVRSVSA*VVSWQEERLDS
Trigger: GCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGACCGCACATTGGCCCTGCTACGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCTCTTCACCAACAGGGTaGTGGACCCTGGTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCSSPTG*WTLVWP
Trigger: AGGCCAGACCAGGGTCCACAACCCTGTTGGTGAAGA...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CAA 90 bp GGGGGAGTGAAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCCTCCTTATGCTCTGCTaGAGTTCTCGTTGCCACAGG +
Preference number: 3 (lower is better)
Translates to: GGVKLRGKSRGPGYLNPVLLMLC*SSRCHR
Trigger: CCTGTGGCAACGAGAACTCAAGCAGAGCATAAGGAG...GACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCACTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 72 bp CTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTaGAAGGACCTTCAGCATCTGGACAGAAAGATTCCT +
Preference number: 3 (lower is better)
Translates to: LGQVAGSRLHTP*KDLQHLDRKIP
Trigger: AGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR CCA 72 bp TCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGTaGAGGCCCCAAGGGGAGGGAGGGCTCACAAAGAGA +
Preference number: 3 (lower is better)
Translates to: SPVYSDYNSFWR*RPQGEGGLTKR
Trigger: TCTCTTTGTGAGCCCTCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 72 bp TGTCTGTACTCCTCAGCCATGAAAGAGGCACATCCTTaGAGCCTAAGCTTCAGCTCGGCTGCCTGTGACCCG +
Preference number: 3 (lower is better)
Translates to: CLYSSAMKEAHP*SLSFSSAACDP
Trigger: CGGGTCACAGGCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAGTACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 72 bp CAGGATGAGTCAGGAGAGCACTCTGCCACTGATCAGTaGCACCGTCAAGCAACCTTACTGGGAGGCCTAGTC +
Preference number: 3 (lower is better)
Translates to: QDESGEHSATDQ*HRQATLLGGLV
Trigger: GACTAGGCCTCCCAGTAAGGTTGCTTGACGGTGTCACTGATCAGTGGCAGAGTGCTCTCCTGACTCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp AAGCAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTaGAGAACCCCCAGCCCTTCTTTCCCTGGGTTACTG +
Preference number: 3 (lower is better)
Translates to: KQAVEDIPGSGS*RTPSPSFPGLL
Trigger: CAGTAACCCAGGGAAAGAAGGGCTGGGGGTTCTCCACGACCCTGACCCTGGAATGTCTTCTACTGCTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCTCTCCTGCTTCTCTCTaGTCATCCACCTCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCSPASL*SSTSVL
Trigger: CAGGACAGAGGTGGATGACAAGAGAGAAGCAGGAGA...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CAA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAACTTGAACTCAGGCATTaGAGGGCAGAACACATATTC +
Preference number: 3 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKLELRH*RAEHIF
Trigger: GAATATGTGTTCTGCCCTCAAATGCCTGAGTTCAAG...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 72 bp CAGAGTAGGGGTCCTTGTTGGCACTGTGGGGACAGATaGGTCCTTAGTTGGTCACAGGGAGAGCCTGGTATT +
Preference number: 3 (lower is better)
Translates to: QSRGPCWHCGDR*VLSWSQGEPGI
Trigger: AATACCAGGCTCTCCCTGTGACCAACTAAGGACTCATCTGTCCCCACAGTGCCAACAAGGACCCCTACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 72 bp ACACTCAGGAGGAGACAGGGAGCTATAGTGGCAGCATaGGTCAGGAGAGAATCCTGCTGCTACCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: TLRRRQGAIVAA*VRRESCCYPVT
Trigger: TGTCACTGGGTAGCAGCAGGATTCTCTCCTGACTCATGCTGCCACTATAGCTCCCTGTCTCCTCCTGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CAA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCTGTGACACAAGGGACTaGGTGTATAGAGCTATAGAG +
Preference number: 3 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSCDTRD*VYRAIE
Trigger: CTCTATAGCTCTATACACCAAGTCCCTTGTGTCACA...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 72 bp AGACTGGCAGGTGTGGCAATGGTAAGGGGTAACTACTaGTCACTTACAGGGGAACATTCTGGAGTCAGCGTC +
Preference number: 3 (lower is better)
Translates to: RLAGVAMVRGNY*SLTGEHSGVSV
Trigger: GACGCTGACTCCAGAATGTTCCCCTGTAAGTGAGCAGTAGTTACCCCTTACCATTGCCACACCTGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR GCA 72 bp GCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTaGAAAGGGCACCAGCAGCAGCTGCTAACTGGAGCC +
Preference number: 3 (lower is better)
Translates to: ASLRKKFLNALP*KGHQQQLLTGA
Trigger: GGCTCCAGTTAGCAGCTGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR CCA 72 bp CACGAGGGACTTGAGCATCCTCAGATTTTAGTATGCTaGAAGGTGCGGGGTGTGCTGGAACCAGTTCTCCAT +
Preference number: 3 (lower is better)
Translates to: HEGLEHPQILVC*KVRGVLEPVLH
Trigger: ATGGAGAACTGGTTCCAGCACACCCCGCACCTTCCAGCATACTAAAATCTGAGGATGCTCAAGTCCCTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp GCAGGAATTCATAGACCACGTTGCTTCCGGTACACTTaGCAGGAACTTGGGCACAAAACGGGGGTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: AGIHRPRCFRYT*QELGHKTGVCP
Trigger: AGGACAAACCCCCGTTTTGTGCCCAAGTTCCTGCCAAGTGTACCGGAAGCAACGTGGTCTATGAATTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACTCCTATGGGGGAATCTaGGAATTTAGGGATACTCCA +
Preference number: 3 (lower is better)
Translates to: PKGREGSQREAQAKRLGNSYGGI*EFRDTP
Trigger: TGGAGTATCCCTAAATTCCAAGATTCCCCCATAGGA...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CAA 90 bp ATGTCTAGAAGAGAGGAGGTCTTTATAATGGGCAGGAAGAGCAGGGCAAACTTGTCTCCTCAGTCCACCTaGGCAGTCCTGGCTAAGCAG +
Preference number: 3 (lower is better)
Translates to: MSRREEVFIMGRKSRANLSPQST*AVLAKQ
Trigger: CTGCTTAGCCAGGACTGCCAAGGTGGACTGAGGAGA...CAAGTTTGCCCTGCTCTTCCTGCCCATTATAAAGACCTCCTCTCTTCTAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCCAGAGAGCAAGTATTTaGACTACCCAAAGGAAATAC +
Preference number: 3 (lower is better)
Translates to: SVSAWVVSWQEERLDSTAQRASI*TTQRKY
Trigger: GTATTTCCTTTGGGTAGTCAAAATACTTGCTCTCTG...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CCA 72 bp CTGCTTCTCTCTTGTCATCCACCTCTGTCCTGCTTTTaGAGAGCTTCTAGTCACACTGGTGAGTGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: LLLSCHPPLSCF*RASSHTGECEQ
Trigger: CTGCTCACACTCACCAGTGTGACTAGAAGCTCTCCAAAAGCAGGACAGAGGTGGATGACAAGAGAGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp TCTTCATGCCAAGATCTATGGATATTCCCAGGGACCTaGAGACCCCTGGAGATCTGCACTAGAAAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: SSCQDLWIFPGT*RPLEICTRKGS
Trigger: GCTTCCCTTTCTAGTGCAGATCTCCAGGGGTCTCCAGGTCCCTGGGAATATCCATAGATCTTGGCATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp CTAGTAACTCTATCTTGGCTTTATCAAAGGCAAGCCTaGGGAGGTTTCCCCAGACCTTTCCCAGAGGCTACC +
Preference number: 3 (lower is better)
Translates to: LVTLSWLYQRQA*GGFPRPFPEAT
Trigger: GGTAGCCTCTGGGAAAGGTCTGGGGAAACCTCCCCAGGCTTGCCTTTGATAAAGCCAAGATAGAGTTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR-3UTR CAA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGGAGCCTGGTATTACCTaGCAAGGCCCTCCCACTGAA +
Preference number: 3 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWREPGIT*QGPPTE
Trigger: TTCAGTGGGAGGGCCTTGCAAGGTAATACCAGGCTC...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR-3UTR CAA 90 bp GAGACCAGGGAGCTGGAAGCAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTGCTCTTTTCAAACCTTTaGAAACTCCTTATGCTCTGC +
Preference number: 3 (lower is better)
Translates to: ETRELEASSRRHSRVRVVLFSNL*KLLMLC
Trigger: GCAGAGCATAAGGAGTTTCAAAAGGTTTGAAAAGAG...CACGACCCTGACCCTGGAATGTCTTCTACTGCTTGCTTCCAGCTCCCTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 72 bp TGTCTCCTGCTTCTCTCTTGTCATCCACCTCTGTCCTaGTTTTGGAGAGCTTCTAGTCACACTGGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: CLLLLSCHPPLS*FWRASSHTGEC
Trigger: ACACTCACCAGTGTGACTAGAAGCTCTCCAAAAGCAGGACAGAGGTGGATGACAAGAGAGAAGCAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp GGAACATTCTGGAGTCAGCGTCCTATGGGGGAATCTTaGAATTTAGGGATACTCCAAAGCCGACCTTCCTGT +
Preference number: 3 (lower is better)
Translates to: GTFWSQRPMGES*NLGILQSRPSC
Trigger: ACAGGAAGGTCGGCTTTGGAGTATCCCTAAATTCCAAGATTCCCCCATAGGACGCTGACTCCAGAATGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp CCAATGCAGGTGTTCAGTAAACTTGCAGATGGTGCCTaGTGTCTTGAGCTGTGTCACATGAGTGCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: PMQVFSKLADGA*CLELCHMSALG
Trigger: ACCCAAAGCACTCATGTGACACAGCTCAAGACACCAGGCACCATCTGCAAGTTTACTGAACACCTGCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CCA 72 bp ACCTGCAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTaGCATGAAGAGAGACTTGGTGCAAAGGCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: TCRKNLPLCREA*HEERLGAKAEN
Trigger: ATTTTCAGCCTTTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
3UTR-3UTR CAA 90 bp TCCTGCAGCCCCTCCCTGCCAGCTTTGCAACTTCCTAAGTCAGGAATGGGAATATTCAAGTATCTAAGTTaGATCCCCAGCACACACACA +
Preference number: 3 (lower is better)
Translates to: SCSPSLPALQLPKSGMGIFKYLS*IPSTHT
Trigger: TGTGTGTGTGCTGGGGATCAAACTTAGATACTTGAA...TATTCCCATTCCTGACTTAGGAAGTTGCAAAGCTGGCAGGGAGGGGCTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 72 bp CAGATGCCTCTGTATATGGTTCTCCAGCAGCATAACTaGATTGCCACTGCTTGGATTGACAAGGCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: QMPLYMVLQQHN*IATAWIDKAAV
Trigger: GACTGCAGCCTTGTCAATCCAAGCAGTGGCAATTCAGTTATGCTGCTGGAGAACCATATACAGAGGCATCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 72 bp CTCAGAGAGTTTCAGAGCGGGGAAACTCAAAGGAAATaGGGAACTCTCCGGTCTACTCAGACTACAACTCTT +
Preference number: 3 (lower is better)
Translates to: LREFQSGETQRK*GTLRSTQTTTL
Trigger: AAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGAGTTTCCCCGCTCTGAAACTCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 72 bp TTGAGGGCAGAACACATATTCTTAACCAGTGTCTTCTaGTGCTCTGGACATTGTGATGTGACACAAGGGACT +
Preference number: 3 (lower is better)
Translates to: LRAEHIFLTSVF*CSGHCDVTQGT
Trigger: AGTCCCTTGTGTCACATCACAATGTCCAGAGCATCAGAAGACACTGGTTAAGAATATGTGTTCTGCCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 72 bp AGTGAGAGATTAAGAAGTTACATACCAAATGAACCCTaGGCTGGCCTTGAACTCAGGCATTTGAGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: SERLRSYIPNEP*AGLELRHLRAE
Trigger: TTCTGCCCTCAAATGCCTGAGTTCAAGGCCAGCTCAGGGTTCATTTGGTATGTAACTTCTTAATCTCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR GCA 72 bp TGCATTACTGGTTTTAGCAGCAAACACTTCCACAGATaGCTCTGTATATGGTTCTCCAGCAGCATAACTGAA +
Preference number: 3 (lower is better)
Translates to: CITGFSSKHFHR*LCIWFSSSITE
Trigger: TTCAGTTATGCTGCTGGAGAACCATATACAGAGGCATCTGTGGAAGTGTTTGCTGCTAAAACCAGTAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CCA 72 bp AGGCTAGAACATCTGGCAGGGTTTAGAATCCATACTTaGAGGGTAAGACATCATGTCAATAGGGAGAAATAC +
Preference number: 3 (lower is better)
Translates to: RLEHLAGFRIHT*RVRHHVNREKY
Trigger: GTATTTCTCCCTATTGACATGATGTCTTACCCTCCAAGTATGGATTCTAAACCCTGCCAGATGTTCTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR TCA 72 bp ATTCTTAACCAGTGTCTTCTGATGCTCTGGACATTGTaGTGTGACACAAGGGACTTGGTGTATAGAGCTATA +
Preference number: 3 (lower is better)
Translates to: ILNQCLLMLWTL*CDTRDLVYRAI
Trigger: TATAGCTCTATACACCAAGTCCCTTGTGTCACATCACAATGTCCAGAGCATCAGAAGACACTGGTTAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR TCA 72 bp GGGCATACTATTGTCCCTATTTCATATTTACAGGGCTaGGGATGTAGCTCAGTAATAGAGCATGTACTTAGT +
Preference number: 3 (lower is better)
Translates to: GHTIVPISYLQG*GCSSVIEHVLS
Trigger: ACTAAGTACATGCTCTATTACTGAGCTACATCCTCAGCCCTGTAAATATGAAATAGGGACAATAGTATGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATACACTTTCCTCGGCCCTaGCCCAGGCTGCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SQGPRALKLTLRRRQGAIHFPRP*PRLQGS
Trigger: TGAGCCCTGCAGCCTGGGGCAGGGCCGAGGAAAGTG...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTCCCCCGGAAGGCACCTaGCCCCTGCTGAGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPPPEGT*PLLRRH
Trigger: GTGGCGCCTCAGCAGGGGTCAGGTGCCTTCCGGGGG...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp GTGACAGTGCTCGGCGGGGTCTCTCAGTCCCAGGCACTGCAGCCCCTGGGAAACCGCTGCACAGAAGGTTaGTTCCAGACCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: VTVLGGVSQSQALQPLGNRCTEG*FQTPSC
Trigger: GCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCG...GTTTCCCAGGGGCTGCAGTGCCTGGGACTGAGAGACCCCGCCGAGCACTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACGTGGGCAGGGCCTTCTaGCAGTGCCTGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PKGREGSQREAQAKRLGNVGRAF*QCLQGL
Trigger: GAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCAC...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GTGACAGTGCTCGGCGGGGTCTCTCAGTCCCAGGCACTGCAGCCCCTGGGAAACCGAGGAAAGGCAAAATaGCCAGCCGTTAACGGACTC +
Preference number: 4 (lower is better)
Translates to: VTVLGGVSQSQALQPLGNRGKAK*PAVNGL
Trigger: GAGTCCGTTAACGGCTGGTCATTTTGCCTTTCCTCG...GTTTCCCAGGGGCTGCAGTGCCTGGGACTGAGAGACCCCGCCGAGCACTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCGTTGCAGGCGAGGGCTaGCGCCGCCGATGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTVAGEG*RRRCRR
Trigger: GCGCCTACATCGGCGGCGTCAGCCCTCGCCTGCAAC...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATAGCCGATGGGAAAGCTTaGTGGTGGCTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SQGPRALKLTLRRRQGAIADGKA*WWLCWC
Trigger: ACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGC...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp ACGTGGGCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTGCAAGGACCAGAAAAGTCAAGTGGTaGGCTTCCCAACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TWAWDRWQEAGSIPPARTRKVKW*ASQQPS
Trigger: GCTGGGCTGTTGGGAAGCCCACCACTTGACTTTTCT...GGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAACAGGGCAGCAGGCGCTaGAAAAGCAGGCGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREQGSRR*KSRRER
Trigger: CCTCTCGCGCCTGCTTTTCCAGCGCCTGCTGCCCTG...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAAGCCAGGAGCCACTCCTaGGCCTCCGGGCTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: AGGQFSVPCLSPLQHPFQARSHS*ASGLLG
Trigger: GCCTAGCAGCCCGGAGGCCCAGGAGTGGCTCCTGGC...TTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCCAGGGCTCAGGGTGCTaGGGAGGCTTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SVSAWVVSWQEERLDSTAQGSGC*GGLSCS
Trigger: TGAACAGCTCAAGCCTCCTCAGCACCCTGAGCCCTG...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR TCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGGCTGCCAGGTTGCCATaGGTATCGAAGCGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKAARLP*VSKRSP
Trigger: GGGACTCCGCTTCGATACTCATGGCAACCTGGCAGC...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CAGAGTATACCTGCAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTGGCATGAAGGGCCCTGCCCCAGGCTaGAGGGCTCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QSIPAGKTCLCAERLGMKGPAPG*RAQGAE
Trigger: CTCAGCACCCTGAGCCCTGCAGCCTGGGGCAGGGCC...CTTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp GTGAAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCTTGAGCCACTTTCCTCGGCCCTaGCCCAGGCTGCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VKLRGKSRGPGYLNPVLSHFPRP*PRLQGS
Trigger: TGAGCCCTGCAGCCTGGGGCAGGGCCGAGGAAAGTG...GCTCAAGACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCGATGTAGGCGCCCCCTaGCGCCAACGCCGCGAACCA +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTDVGAP*RQRREP
Trigger: TGGTTCGCGGCGTTGGCGGCAGGGGGCGCCTACATC...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACACAGGGGCTTGGGCATaGTGGAGGCAGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PKGREGSQREAQAKRLGNTGAWA*WRQQLP
Trigger: TGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGT...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAAGCCCCACCATCCTCTTaGTCCGGACCACACTTTCCT +
Preference number: 4 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKAPPSS*SGPHFP
Trigger: AGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGC...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCTCGCTGCCACCCCTCTaGCCGTGCGCTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVSLPPL*PCAWAT
Trigger: TGTGGCCCAAGCGCACGGCCAGAGGGGTGGCAGCGA...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCGGGGAGACAGGGGCTTaGGCATGCTGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCGETGA*ACWRQQ
Trigger: CTGCTGCCTCCAGCATGCCCAAGCCCCTGTCTCCCC...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GGGGGAGTGAAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCGGGTACAGAGGAAGATaGAGGCCAGACACCCCACGA +
Preference number: 4 (lower is better)
Translates to: GGVKLRGKSRGPGYLNPVGYRGR*RPDTPR
Trigger: TCGTGGGGTGTCTGGCCTTCATCTTCCTCTGTACCC...GACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCACTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp CTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGGGTCGCTGCACAGAAGGTTaGTTCCAGACCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: LLTGASGTSHVCDSARRGRCTEG*FQTPSC
Trigger: GCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCG...ACCCCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp CCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCGGCCCTGCCCCAGGCTaGAGGGCTCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLSERNFSMHFPAKGTSSGPAPG*RAQGAE
Trigger: CTCAGCACCCTGAGCCCTGCAGCCTGGGGCAGGGCC...GCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp CCGCTGTCCCCATCACAACAGCTGGTGTGGGGCAAAGCTCCCACCTGGGAGTCAATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLSPSQQLVWGKAPTWESMEWMA*RFHRLP
Trigger: GGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCAT...TGACTCCCAGGTGGGAGCTTTGCCCCACACCAGCTGTTGTGATGGGGACAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp CTCGGCGGGGTCTCTCAGTCCCAGGCACTGCAGCCCCTGGGAAACCAGAGTATAATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGGVSQSQALQPLGNQSIMEWMA*RFHRLP
Trigger: GGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCAT...TATACTCTGGTTTCCCAGGGGCTGCAGTGCCTGGGACTGAGAGACCCCGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATATCCTCGAACAGGAACTaGTGGCGATACTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: SQGPRALKLTLRRRQGAISSNRN*WRYSAS
Trigger: TGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGA...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGAGGTGCCAGCCACAGCTaGCACAGAGAACAGACTGAG +
Preference number: 4 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGGASHS*HREQTE
Trigger: CTCAGTCTGTTCTCTGTGGCAGCTGTGGCTGGCACC...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACGCTTGCTGGTGGCTGTaGTGGTGTCGAAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKGREGSQREAQAKRLGNACWWL*WCRSWD
Trigger: GTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGC...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGGGGTGGGGCCAGCCTaGTTATATGGAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREGVGPA*LYGEEV
Trigger: GACCTCCTCTCCATATAAGCAGGCTGGCCCCACCCC...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp ATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCAGGGGCGGAGCAGCTTCTCTCTaGGCTTGCCTCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ICRAHRSGGVKLRGKSRGGAASL*ACLRSH
Trigger: ATGGCTCCTGAGGCAAGCCCAGAGAGAAGCTGCTCC...GCCCCTGGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAACTGACACTGACCACATaGCGCTGCACAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKLTLTT*RCTEGC
Trigger: GCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAG...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CCGCTGTCCCCATCACAACAGCTGGTGTGGGGCAAAGCTCCCACCTGGGAGTCAGACACATGGAATGGATaGCTTGCAGGTTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PLSPSQQLVWGKAPTWESDTWNG*LAGSTG
Trigger: GCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTC...TGACTCCCAGGTGGGAGCTTTGCCCCACACCAGCTGTTGTGATGGGGACAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGATGCTCAGCAGCAGTGTaGCAAAGGCTAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGCSAAV*QRLVPG
Trigger: CCCTGGCACTAGCCTTTGCCACACTGCTGCTGAGCA...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGACGCTGCACAGAAGGTTaGTTCCAGACCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGRCTEG*FQTPSC
Trigger: GCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCG...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGGAGCAGCTTCTCTCTaGGCTTGCCTCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREGAASL*ACLRSH
Trigger: ATGGCTCCTGAGGCAAGCCCAGAGAGAAGCTGCTCC...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGGACACATGGAATGGATaGCTTGCAGGTTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: QLLTGASGTSHVCDSARRDTWNG*LAGSTG
Trigger: GCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTC...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGAACGGGGGTTTGTCCTaGCTAGACCCCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKNGGLS*LDPTQA
Trigger: TGCTTGTGTGGGGTCTAGCCAGGACAAACCCCCGTT...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATATCGAACAGGAACTGCTaGCGATACTCTGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SQGPRALKLTLRRRQGAISNRNC*RYSASK
Trigger: CTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGA...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGGCATCCCACGGCAGATaGGCGCAGGGCCAGAGGATC +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGASHGR*AQGQRI
Trigger: GATCCTCTGGCCCTGCGCCCATCTGCCGTGGGATGC...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCGGGGCTTGGGCATGCTaGAGGCAGCAGCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTGAWAC*RQQLPS
Trigger: TGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCC...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTTGCCTGATCCAGGTTTaGGGGGTGGGGCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGCLIQV*GVGPAC
Trigger: GCAGGCTGGCCCCACCCCCCAAACCTGGATCAGGCA...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGCGAGGAAAGGCAAAATaGCCAGCCGTTAACGGACTC +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKRGKAK*PAVNGL
Trigger: GAGTCCGTTAACGGCTGGTCATTTTGCCTTTCCTCG...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGGAACGTGATGAAGAGTaGGCGCAGGTAGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKERDEE*AQVEGH
Trigger: ATGTCCCTCTACCTGCGCTCACTCTTCATCACGTTC...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTGTGGCCCGGCTGATCTaGCGTAAAGAGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPVARLI*RKEKAT
Trigger: TGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCAC...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGTCCAGTGCCATTCATaGCTTCTGGGGAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREVQCHS*LLGRYP
Trigger: TGGGTACCTCCCCAGAAGTCATGAATGGCACTGGAC...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGGGCCCTGCCCCAGGCTaGAGGGCTCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSPLQHPFQCRCSVNLQMGPAPG*RAQGAE
Trigger: CTCAGCACCCTGAGCCCTGCAGCCTGGGGCAGGGCC...CATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKMEWMA*RFHRLP
Trigger: GGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCAT...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACCCTTCTGGCAGTGCCTaGAGGGGCTCAGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PKGREGSQREAQAKRLGNPSGSA*RGSVFC
Trigger: ACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGG...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGGCACACGGACACTATaGTCAGAGGCACAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREGTRTL*SEAQVS
Trigger: TGACACCTGTGCCTCTGAGCATAGTGTCCGTGTGCC...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp ATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCAGGGGCAGAAAAGTCAAGTGGTaGGCTTCCCAACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ICRAHRSGGVKLRGKSRGRKVKW*ASQQPS
Trigger: GCTGGGCTGTTGGGAAGCCCACCACTTGACTTTTCT...GCCCCTGGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp GACCAGCTGGGGCAGCACTCATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAAATGCGACACATGGAATaGATGGCTTGCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: DQLGQHSLAADRWHRAPKMRHME*MACRFH
Trigger: GTGGAACCTGCAAGCCATCCATTCCATGTGTCGCAT...TTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CTCGGCGGGGTCTCTCAGTCCCAGGCACTGCAGCCCCTGGGAAACCAGAGTATAGTTCTATGCGACACATaGAATGGATGGCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGGVSQSQALQPLGNQSIVLCDT*NGWLAG
Trigger: ACCTGCAAGCCATCCATTCCATGTGTCGCATAGAAC...TATACTCTGGTTTCCCAGGGGCTGCAGTGCCTGGGACTGAGAGACCCCGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAACTGGTGAACCAACCCTaGTTGAGGCCAGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AGGQFSVPCLSPLQHPFQLVNQP*LRPGGA
Trigger: GGCACCTCCTGGCCTCAACCAGGGTTGGTTCACCAG...TTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTTTCGGAGAATCCTGGTaGCCCCGCTCGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGFGESW*PRSPLL
Trigger: GAGAAGGGGCGAGCGGGGCCACCAGGATTCTCCGAA...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCCGCTTCCCATTCAGCTaGCCCCGCTCAAGTATGGGG +
Preference number: 4 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGRFPFS*PRSSMG
Trigger: CCCCATACTTGAGCGGGGCCAGCTGAATGGGAAGCG...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGAGGGCTGATATCGCCTaGCCCTCCACGGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGRADIA*PSTALP
Trigger: TGGAAGGGCCGTGGAGGGCCAGGCGATATCAGCCCT...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCGCCCTGCGTGGCACGTaGGCCTGGGACAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGALRGT*AWDRWQ
Trigger: CTGCCACCTGTCCCAGGCCCACGTGCCACGCAGGGC...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR TCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGTGTCATCTGAGACGCTaGGTCCCTCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGCHLRR*VPPGCW
Trigger: CCAGCACCCTGGAGGGACTCAGCGTCTCAGATGACA...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGACTTGGTGCAAAGGCTaGAAATCAACAACACAGCCC +
Preference number: 4 (lower is better)
Translates to: QLLTGASGTSHVCDSARRTWCKG*KSTTQP
Trigger: GGGCTGTGTTGTTGATTTTCAGCCTTTGCACCAAGT...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR GCA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCCTGACCACATGGCGCTaGACAGAAGGTTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCLTTWR*TEGCFQ
Trigger: CTGGAAGCAACCTTCTGTGCAGCGCCATGTGGTCAG...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp GTGAAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCTTGAGCGGGCCAGTGAGGGCCTaGATGGCTTTCCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VKLRGKSRGPGYLNPVLSGPVRA*MAFQTS
Trigger: AGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCC...GCTCAAGACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp CTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCACACTTTCCTCGGCCCTaGCCCAGGCTGCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSQKEISQCTSLQRAPAAHFPRP*PRLQGS
Trigger: TGAGCCCTGCAGCCTGGGGCAGGGCCGAGGAAAGTG...TGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGAGGGCTCTCCATCCACTaGTGTAAGGCTTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGGLSIH*CKASTK
Trigger: TTTAGTGGAAGCCTTACAGCAGTGGATGGAGAGCCC...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCTATGGAGAGGAGGTCTaGAGGGCTGGACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVYGEEV*RAGHWL
Trigger: CAGCCAGTGTCCAGCCCTGCAGACCTCCTCTCCATA...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTCAAGGGGACAGGTGTaGAGGGAGCAGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPSRGQV*REQLLS
Trigger: AGAGAGAAGCTGCTCCCTCCACACCTGTCCCCTTGA...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGCACGATCACAGCCACTaGCCAATCAGCAATCATATG +
Preference number: 4 (lower is better)
Translates to: QLLTGASGTSHVCDSARRHDHSH*PISNHM
Trigger: CATATGATTGCTGATTGGCCAGTGGCTGTGATCGTG...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GAGACCAGGGAGCTGGAAGCAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTGCTCAGAAAAGTCAAGTaGTGGGCTTCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: ETRELEASSRRHSRVRVVLRKVK*WASQQP
Trigger: GGGCTGTTGGGAAGCCCACCACTTGACTTTTCTGAG...CACGACCCTGACCCTGGAATGTCTTCTACTGCTTGCTTCCAGCTCCCTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp GGAAACCAGAGTATACCTGCAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTGGCGCCCCACCATCCTCTTaGTCCGGACCACACTTTCCT +
Preference number: 4 (lower is better)
Translates to: GNQSIPAGKTCLCAERLGAPPSS*SGPHFP
Trigger: AGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGC...GCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTAACACCAGCTTTGCATaGCTCTTCTCAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPNTSFA*LFSGRP
Trigger: TGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTT...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGCAGAACAGGACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGACACATGGAATGGATaGCTTGCAGGTTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SRTGQCRTEARVHFQPREDTWNG*LAGSTG
Trigger: GCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTC...TTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTCCTGTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGGGGCAGCACTCATTaGCTGCTGATCGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: AGGQFSVPCLSPLQHPFQWGSTH*LLIAGT
Trigger: TGTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCA...TTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTTGCCCAAGGACCAGCTaGGGCAGCACTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGCPRTS*GSTHWL
Trigger: CAGCCAATGAGTGCTGCCCCAGCTGGTCCTTGGGCA...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTGCTTGGGTAGTGTCTTaGCAGGAGGAGCGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPAWVVS*QEERLD
Trigger: GTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGC...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTCAGGGCCAGAGGATCTaGCCACAGTTCTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPQGQRI*PQFFSG
Trigger: GCCAGAAAAGAACTGTGGCCAGATCCTCTGGCCCTG...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCTGCAGGGCTGGACACTaGCTGAAGACTGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTCRAGH*LKTVWW
Trigger: CCACCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCA...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCTTGGACTTAGGGCAGTaGGCAGGGCCTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTLDLGQ*AGPSGS
Trigger: ACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAA...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGACGGAGCCAAACATCTaGGAGATCTGGCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKTEPNI*EIWLTV
Trigger: AACAGTCAGCCAGATCTCCCAGATGTTTGGCTCCGT...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp GGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCTaGAGCTCTCTCACCTCTTGTCATGCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKSRGPGYLNPV*SSLTSCHAEGQ
Trigger: CTGCCCTTCAGCATGACAAGAGGTGAGAGAGCTCAAGACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
3UTR CAA 72 bp ATAGACCACGTTGCTTCCGGTACACTTGGCAGGAACTaGGGCACAAAACGGGGGTTTGTCCTGGCTAGACCC +
Preference number: 4 (lower is better)
Translates to: IDHVASGTLGRN*GTKRGFVLARP
Trigger: GGGTCTAGCCAGGACAAACCCCCGTTTTGTGCCCAAGTTCCTGCCAAGTGTACCGGAAGCAACGTGGTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR TCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCTGTCTATGGAGGTGCTaGGGTTGGAGACATGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGCLWRC*GWRHGH
Trigger: GTGCCCATGTCTCCAACCTCAGCACCTCCATAGACA...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGAGGCTGCGCTGGTGGTaGGGCCTGAGACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VFPTFLCSHLSFCSTCPGRLRWW*GLRPGA
Trigger: TGCTCCTGGTCTCAGGCCTCACCACCAGCGCAGCCT...CCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp TCCTGCAGCCCCTCCCTGCCAGCTTTGCAACTTCCTAAGTCAGGAATGGGAATACGCTGCACAGAAGGTTaGTTCCAGACCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: SCSPSLPALQLPKSGMGIRCTEG*FQTPSC
Trigger: GCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCG...TATTCCCATTCCTGACTTAGGAAGTTGCAAAGCTGGCAGGGAGGGGCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CAAGCAGTAGAAGACATTCCAGGGTCAGGGTCGTGGAGAACCCCCAGCCCTTCTCTGAGGTTGGAGACATaGGCACATAGAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: QAVEDIPGSGSWRTPSPSLRLET*AHRDAW
Trigger: CCAAGCATCTCTATGTGCCCATGTCTCCAACCTCAG...AGAAGGGCTGGGGGTTCTCCACGACCCTGACCCTGGAATGTCTTCTACTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp TCTGTATCGGCTTGGGTAGTGTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCCACGATCACAGCCACTaGCCAATCAGCAATCATATG +
Preference number: 4 (lower is better)
Translates to: SVSAWVVSWQEERLDSTAHDHSH*PISNHM
Trigger: CATATGATTGCTGATTGGCCAGTGGCTGTGATCGTG...GGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGCCCCACCATCCTCTTaGTCCGGACCACACTTTCCT +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGAPPSS*SGPHFP
Trigger: AGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGC...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TCCTGCAGCCCCTCCCTGCCAGCTTTGCAACTTCCTAAGTCAGGAATGGGAATAAACACCAGCTTTGCATaGCTCTTCTCAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SCSPSLPALQLPKSGMGINTSFA*LFSGRP
Trigger: TGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTT...TATTCCCATTCCTGACTTAGGAAGTTGCAAAGCTGGCAGGGAGGGGCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGAGTTCTATGCGACACATaGAATGGATGGCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGVLCDT*NGWLAG
Trigger: ACCTGCAAGCCATCCATTCCATGTGTCGCATAGAAC...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCGTTCTATGCGACACATaGAATGGATGGCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSVLCDT*NGWLAG
Trigger: ACCTGCAAGCCATCCATTCCATGTGTCGCATAGAAC...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGCTAGAACGGAAGAACTaGCCTCCAAGTGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKLERKN*PPSGNR
Trigger: TCTATTGCCACTTGGAGGCCAGTTCTTCCGTTCTAG...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTCAGGCGGTCCGGGTGTaGGCACAAGTGATAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGQAVRV*AQVIGD
Trigger: ATCTCCTATCACTTGTGCCCACACCCGGACCGCCTG...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCGATGGGAAAGCTTGCTaGTGGCTGTGCTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVDGKAC*WLCWCR
Trigger: TCGACACCAGCACAGCCACCAGCAAGCTTTCCCATC...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTGGTACCCACAGAATCTaGCACACGGACACTATGCTC +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPGTHRI*HTDTML
Trigger: GAGCATAGTGTCCGTGTGCCAGATTCTGTGGGTACC...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp CCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCGGGTACAGAGGAAGATaGAGGCCAGACACCCCACGA +
Preference number: 4 (lower is better)
Translates to: PLSERNFSMHFPAKGTSSGYRGR*RPDTPR
Trigger: TCGTGGGGTGTCTGGCCTTCATCTTCCTCTGTACCC...GCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGCCCCAAAACTGATGTaGGAGCGGATCTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGAPKLM*ERICSC
Trigger: ACAGGAGCAGATCCGCTCTCACATCAGTTTTGGGGC...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGGGAGAGCCGCTAGATTaGCAAAGGGGAAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGGEPLD*QRGSRP
Trigger: TGGCCTACTTCCCCTTTGTCAATCTAGCGGCTCTCC...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGGGGCCAGTGAGGGCCTaGATGGCTTTCCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGGPVRA*MAFQTS
Trigger: AGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCC...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCACTTTCCTCGGCCCTaGCCCAGGCTGCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPKGMGKPLSERNFSMHFHFPRP*PRLQGS
Trigger: TGAGCCCTGCAGCCTGGGGCAGGGCCGAGGAAAGTG...GAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGGCACGGCCAGATAGTTaGCCAAGGACCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWRARPDS*PRTSWG
Trigger: GCCCCAGCTGGTCCTTGGGCAACTATCTGGCCGTGC...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp TTCCCAGCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTGTGCCATCAGGACTTTaGTCCAGAGCCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: FPAGGQFSVPCLSPLQHPVPSGL*SRAIIL
Trigger: CAAGATGATGGCTCTGGAGCAAAGTCCTGATGGCAC...AGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCCGACAGCTGGCTCTGTaGTTAGACTATGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTRQLAL*LDYAAS
Trigger: GCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCG...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGGCTGGAGGCAGCAGCTaGCATCATGTATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGAGGSS*HHVSAG
Trigger: ACCTGCAGATACATGATGGCAGCTGCTGCCTCCAGC...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp GGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGTCAACAACACAGCCCTaGGTGGCACGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GMGKPLSERNFSMHFPAKSTTQP*VARGPG
Trigger: CCCAGGCCCACGTGCCACGCAGGGCTGTGTTGTTGA...CTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR GCA 90 bp GTGAAGCTCAGAGGGAAATCCAGGGGCCCAGGTTACCTTAACCCTGTCTTGAGCCCTGCTCCTGTTCTATaGGACACATGGAATGGATGG +
Preference number: 4 (lower is better)
Translates to: VKLRGKSRGPGYLNPVLSPAPVL*DTWNGW
Trigger: CCATCCATTCCATGTGTCGCATAGAACAGGAGCAGG...GCTCAAGACAGGGTTAAGGTAACCTGGGCCCCTGGATTTCCCTCTGAGCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACCACGATCACAGCCACTaGCCAATCAGCAATCATATG +
Preference number: 4 (lower is better)
Translates to: PKGREGSQREAQAKRLGNHDHSH*PISNHM
Trigger: CATATGATTGCTGATTGGCCAGTGGCTGTGATCGTG...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCAGAAAAGTCAAGTGGTaGGCTTCCCAACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVRKVKW*ASQQPS
Trigger: GCTGGGCTGTTGGGAAGCCCACCACTTGACTTTTCT...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GCAGGAGGCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAACTCAGAAAAGTCAAGTaGTGGGCTTCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: AGGQFSVPCLSPLQHPFQLRKVK*WASQQP
Trigger: GGGCTGTTGGGAAGCCCACCACTTGACTTTTCTGAG...TTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGCCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCAGTATGGAAGGCCGATaGGAAAGCTTGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGSMEGR*ESLLVA
Trigger: AGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCTGGCTGAAGACTGTCTaGTGGTCTAGGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTWLKTV*WSRSRS
Trigger: GGATCTGCTCCTAGACCACCAGACAGTCTTCAGCCA...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp TCCCAAAGATGGAGTACCTTAGCGTCACTGAACTTCTaGTCACCCGGGAGACAGCTGATCAGCCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SQRWSTLASLNF*SPGRQLISLPN
Trigger: ATTGGGGAGGCTGATCAGCTGTCTCCCGGGTGACAAGAAGTTCAGTGACGCTAAGGTACTCCATCTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp AGTTTTCTAAGCAGGAAGAGCTCTCCTCAGTCCACCTaGGCAGTCCTGGCTAAGCAGTATCCCACGGGAACT +
Preference number: 4 (lower is better)
Translates to: SFLSRKSSPQST*AVLAKQYPTGT
Trigger: AGTTCCCGTGGGATACTGCTTAGCCAGGACTGCCAAGGTGGACTGAGGAGAGCTCTTCCTGCTTAGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR TCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCCAGGGCTCAGGGTGCTaGGGAGGCTTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGQGSGC*GGLSCS
Trigger: TGAACAGCTCAAGCCTCCTCAGCACCCTGAGCCCTG...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp AAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCACAGGGCTCAGGGTGCTaGGGAGGCTTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KGMGKPLSERNFSMHFPAQGSGC*GGLSCS
Trigger: TGAACAGCTCAAGCCTCCTCAGCACCCTGAGCCCTG...TGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCGTACAGCAGTGCCCATaGAAAGAGCAAAGCAACGCA +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVVQQCP*KEQSNA
Trigger: TGCGTTGCTTTGCTCTTTTCATGGGCACTGCTGTAC...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGCCACTGAGCTGTTGGTaGGAGGGTCCAGGGGATCAC +
Preference number: 4 (lower is better)
Translates to: LSPLQHPFQCRCSVNLQMPLSCW*EGPGDH
Trigger: GTGATCCCCTGGACCCTCGCACCAACAGCTCAGTGG...CATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCCCTTCCAGGATAAGCTaGTGTGGTGAGAATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVPSRIS*CGENWA
Trigger: TGCCCAATTCTCACCACAGCAGCTTATCCTGGAAGG...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCAACACCAGCTTTGCATaGCTCTTCTCAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PLSERNFSMHFPAKGTSSNTSFA*LFSGRP
Trigger: TGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTT...GCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GGAAACCAGAGTATACCTGCAGGAAAAACCTGCCTCTGTGCAGAGAGGCTTGGCATGCGACACATGGAATaGATGGCTTGCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GNQSIPAGKTCLCAERLGMRHME*MACRFH
Trigger: GTGGAACCTGCAAGCCATCCATTCCATGTGTCGCAT...GCCAAGCCTCTCTGCACAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp AAAGAACAGTCCTTAGGGGACCCTTGGAGTTGGATCACCAAGCTCCCTCCTGTCGCCACAGTTCTTTTCTaGCCCGAAGAAACAGCACAG +
Preference number: 4 (lower is better)
Translates to: KEQSLGDPWSWITKLPPVATVLF*PEETAQ
Trigger: CTGTGCTGTTTCTTCGGGCCAGAAAAGAACTGTGGC...GACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCCTGAAGACTGTCTGGTaGTCTAGGAGCAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTLKTVW*SRSRSL
Trigger: AAGGGATCTGCTCCTAGACCACCAGACAGTCTTCAG...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCTCAGTTTTCTGTCCCTaGGAATCTTGCCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCSVFCP*ESCLIQ
Trigger: CTGGATCAGGCAAGATTCCCAGGGACAGAAAACTGA...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCACATGCCAAAGAAGATaGCAACCAGGGCTATCAAGG +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTTCQRR*QPGLSR
Trigger: CCTTGATAGCCCTGGTTGTCATCTTCTTTGGCATGT...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp AGGGATACTCCAAAGCCGACCTTCCTGTCTCCTGCTTCTCTCTTGTCATCCACCAAACAGCACAGGGACTaGAAGAAGAAGCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RDTPKPTFLSPASLLSSTKQHRD*KKKLAK
Trigger: CTTTGCCAGCTTCTTCTTTCAGTCCCTGTGCTGTTT...GGTGGATGACAAGAGAGAAGCAGGAGACAGGAAGGTCGGCTTTGGAGTATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTCCAGGGTGCTGGCTaGGGAGCACAGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHLQGAG*GAQAIG
Trigger: CCCGATGGCCTGTGCTCCTCAGCCAGCACCCTGGAG...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCTCTGCTCCTGTTCTATaGGACACATGGAATGGATGG +
Preference number: 4 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGSAPVL*DTWNGW
Trigger: CCATCCATTCCATGTGTCGCATAGAACAGGAGCAGA...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTGGCGGCTCAGGTAGCTaGCGTAGAAGGCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSGGSGS*RRRLRW
Trigger: CCAGCGCAGCCTTCTACGGCAGCTACCTGAGCCGCC...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTTATGTGGGGCATAGAAGAACCCAAACAACCTGAGAGAAGTTACCACACCAACGGAGCAGCTTCTCTCTaGGCTTGCCTCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LMWGIEEPKQPERSYHTNGAASL*ACLRSH
Trigger: ATGGCTCCTGAGGCAAGCCCAGAGAGAAGCTGCTCC...GTTGGTGTGGTAACTTCTCTCAGGTTGTTTGGGTTCTTCTATGCCCCACATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp AAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAGCCCCACCATCCTCTTaGTCCGGACCACACTTTCCT +
Preference number: 4 (lower is better)
Translates to: KGMGKPLSERNFSMHFPAAPPSS*SGPHFP
Trigger: AGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGC...TGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp CTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCTACTTGGGGTGGGATGCGACACATGGAATaGATGGCTTGCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LMFSSEFLLHLSWATWGGMRHME*MACRFH
Trigger: GTGGAACCTGCAAGCCATCCATTCCATGTGTCGCAT...CCCACCCCAAGTAGCCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp GTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCCACACCAGAACCACTaGCAAGTTGCCGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VFPTFLCSHLSFCSTCPGPHQNH*QVAALV
Trigger: AACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGG...CCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp TGCCTCTGTGCAGAGAGGCTTGGCATGAAGAGAGACTaGGTGCAAAGGCTGAAAATCAACAACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLCAERLGMKRD*VQRLKINNTAL
Trigger: CAGGGCTGTGTTGTTGATTTTCAGCCTTTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAGCACTCATTGGCTGCTaGTCGCTGGCACAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGALIGC*SLAQSP
Trigger: GGGGCTCTGTGCCAGCGATCAGCAGCCAATGAGTGC...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp GGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCCAGTGAGGGCCTaGATGGCTTTCCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: GHGKASLRKKFLNALPCKGPVRA*MAFQTS
Trigger: AGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCC...TTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp GGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGGCCAGTGAGGGCCTaGATGGCTTTCCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: GMGKPLSERNFSMHFPAKGPVRA*MAFQTS
Trigger: AGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCC...CTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp TCATTCCTAGTGCCAGAATTATGTCAGATTCTTCCAAATTCAATCTCATTTCACGGCCCTGCCCCAGGCTaGAGGGCTCAGGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFLVPELCQILPNSISFHGPAPG*RAQGAE
Trigger: CTCAGCACCCTGAGCCCTGCAGCCTGGGGCAGGGCC...GTGAAATGAGATTGAATTTGGAAGAATCTGACATAATTCTGGCACTAGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR GCA 90 bp CTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCAATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSQKEISQCTSLQRAPAAMEWMA*RFHRLP
Trigger: GGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCAT...TGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR GCA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTGCTTAGACTATGCTaGAAGCTGTACAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGVLRLC*KLYSSK
Trigger: CTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCAC...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGTCCCTGGGAATCTTaGCTGATCCAGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWRCPWES*LIQVWG
Trigger: CCCCCAAACCTGGATCAGGCAAGATTCCCAGGGACA...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCGGAGCAGCTTCTCTCTaGGCTTGCCTCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPKGMGKPLSERNFSMHFGAASL*ACLRSH
Trigger: ATGGCTCCTGAGGCAAGCCCAGAGAGAAGCTGCTCC...GAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GCAAGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTCTCCTCAGTTTCATCTGACACTGACCACATaGCGCTGCACAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: ARTFSIWTERFLISPQFHLTLTT*RCTEGC
Trigger: GCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAG...ATGAAACTGAGGAGAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp CTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCACTCAGAAAAGTCAAGTaGTGGGCTTCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: LSQKEISQCTSLQRAPAALRKVK*WASQQP
Trigger: GGGCTGTTGGGAAGCCCACCACTTGACTTTTCTGAG...TGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGAACACCAGCTTTGCATaGCTCTTCTCAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AWESLSQKEISQCTSLQRNTSFA*LFSGRP
Trigger: TGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTT...CCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTCTGCTCCACTTGTCCTGGGCGTAGGCCAGCCCTCTaGCTGATCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VFPTFLCSHLSFCSTCPGRRPAL*LISKEA
Trigger: AGCTTCTTTGGAGATCAGCCAGAGGGCTGGCCTACG...CCCAGGACAAGTGGAGCAGAAACTCAGATGAGAACATAAGAATGTGGGAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCCTGTGCAGAGAGGCTTaGCATGAAGAGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: PLSERNFSMHFPAKGTSSLCREA*HEERLG
Trigger: ACCAAGTCTCTCTTCATGCCAAGCCTCTCTGCACAG...GCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR CCA 90 bp CAGCCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCAGGCACTGCAGCCCCTaGGAAACCAGAGTATACCTG +
Preference number: 4 (lower is better)
Translates to: QPVSSPKGMGKPLSERNFRHCSP*ETRVYL
Trigger: CAGGTATACTCTGGTTTCCCAGGGGCTGCAGTGCCT...GAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
3UTR CAA 72 bp CTTATTGAAAGAACAGTCCTTAGGGGACCCTTGGAGTaGGATCACCAAGCTCCCTCCTGTCTGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LIERTVLRGPLE*DHQAPSCLICL
Trigger: CAAGCAGATCAGACAGGAGGGAGCTTGGTGATCCAACTCCAAGGGTCCCCTAAGGACTGTTCTTTCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAACGAGGAAAGGCAAAATaGCCAGCCGTTAACGGACTC +
Preference number: 4 (lower is better)
Translates to: GHGKASLRKKFLNALPCKRGKAK*PAVNGL
Trigger: GAGTCCGTTAACGGCTGGTCATTTTGCCTTTCCTCG...TTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR TCA 90 bp AGCATCTGGACAGAAAGATTCCTGATCTCTCCTCAGTTTCATATGTCTGACTTCGGGTACAGAGGAAGATaGAGGCCAGACACCCCACGA +
Preference number: 4 (lower is better)
Translates to: SIWTERFLISPQFHMSDFGYRGR*RPDTPR
Trigger: TCGTGGGGTGTCTGGCCTTCATCTTCCTCTGTACCC...GAAGTCAGACATATGAAACTGAGGAGAGATCAGGAATCTTTCTGTCCAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp AGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCTGACACTGACCACATaGCGCTGCACAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPKGMGKPLSERNFSMHFLTLTT*RCTEGC
Trigger: GCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAG...GAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCAGAAAAGTCAAGTGGTaGGCTTCCCAACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGRKVKW*ASQQPS
Trigger: GCTGGGCTGTTGGGAAGCCCACCACTTGACTTTTCT...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp CAGCCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCCTCAGAAAAGTCAAGTaGTGGGCTTCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: QPVSSPKGMGKPLSERNFLRKVK*WASQQP
Trigger: GGGCTGTTGGGAAGCCCACCACTTGACTTTTCTGAG...GAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGACACATGGAATGGATaGCTTGCAGGTTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: GMGKPLSERNFSMHFPAKDTWNG*LAGSTG
Trigger: GCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTC...CTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
3UTR CAA 72 bp GTCTTTGCACCTCACCTAGCTTCTAGTAACTCTATCTaGGCTTTATCAAAGGCAAGCCTGGGGAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VFAPHLASSNSI*ALSKASLGRFP
Trigger: GGGAAACCTCCCCAGGCTTGCCTTTGATAAAGCCAAGATAGAGTTACTAGAAGCTAGGTGAGGTGCAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR TCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAGGGTACAGAGGAAGATaGAGGCCAGACACCCCACGA +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGGYRGR*RPDTPR
Trigger: TCGTGGGGTGTCTGGCCTTCATCTTCCTCTGTACCC...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCAGGGCTCAGGGTGCTaGGGAGGCTTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHQGSGC*GGLSCS
Trigger: TGAACAGCTCAAGCCTCCTCAGCACCCTGAGCCCTG...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAGGGGGACATTCCAGGTaGTCAGCAGCAGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGGGHSR*SAAVWQ
Trigger: TTGCCACACTGCTGCTGAGCACCTGGAATGTCCCCC...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGTCGGCAGTGTTGAGTTaGCACTCAAGAAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWRSAVLS*HSRRTS
Trigger: GCTGGTTCTTCTTGAGTGGCAACTCAACACTGCCGA...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TCAAAGGAAATGAGGAACTCTCCGGTCTACTCAGACTACAACTCTTTCTGGAGGCTGAGGTTGGAGACATaGGCACATAGAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKEMRNSPVYSDYNSFWRLRLET*AHRDAW
Trigger: CCAAGCATCTCTATGTGCCCATGTCTCCAACCTCAG...CCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGGAGAGTTCCTCATTTCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp AAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCACTGAGGTTGGAGACATaGGCACATAGAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGMGKPLSERNFSMHFPALRLET*AHRDAW
Trigger: CCAAGCATCTCTATGTGCCCATGTCTCCAACCTCAG...TGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp TCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCAGCACGATCACAGCCACTaGCCAATCAGCAATCATATG +
Preference number: 4 (lower is better)
Translates to: SLRKKFLNALPCKGHQQQHDHSH*PISNHM
Trigger: CATATGATTGCTGATTGGCCAGTGGCTGTGATCGTG...CTGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp GCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGATGCGACACATGGAATaGATGGCTTGCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: AWESLSQKEISQCTSLQRMRHME*MACRFH
Trigger: GTGGAACCTGCAAGCCATCCATTCCATGTGTCGCAT...CCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAGCCAGCCTGCTTATATaGAGAGGAGGTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGASLLI*RGGLQG
Trigger: GCCCTGCAGACCTCCTCTCCATATAAGCAGGCTGGC...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp GCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGGACAGAAAGATTCCTaGTCTGCTCCTGTTCTATGC +
Preference number: 4 (lower is better)
Translates to: AWESLSQKEISQCTSLQRGQKDS*SAPVLC
Trigger: GCATAGAACAGGAGCAGATCAGGAATCTTTCTGTCC...CCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR TCA 90 bp AGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACCAGAGAGGCTTGGCATaGAGAGAGACTTGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSPKGMGKPLSERNFSMHQRGLA*RETWCK
Trigger: TTTGCACCAAGTCTCTCTTCATGCCAAGCCTCTCTG...GTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR GCA 90 bp CAGCCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCTGCTCCTGTTCTATaGGACACATGGAATGGATGG +
Preference number: 4 (lower is better)
Translates to: QPVSSPKGMGKPLSERNFSAPVL*DTWNGW
Trigger: CCATCCATTCCATGTGTCGCATAGAACAGGAGCAGA...GAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR GCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCAAAAACCTGCCTCTGTaGAGAGAGGCTTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGKNLPL*REAWHE
Trigger: TTCATGCCAAGCCTCTCTGCACAGAGGCAGGTTTTT...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR GCA 90 bp AGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCTCCTGTTCTATaGGACACATGGAATGGATGG +
Preference number: 4 (lower is better)
Translates to: SPKGMGKPLSERNFSMHFPAPVL*DTWNGW
Trigger: CCATCCATTCCATGTGTCGCATAGAACAGGAGCAGG...GAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp AGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACCTGAGGTTGGAGACATaGGCACATAGAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSPKGMGKPLSERNFSMHLRLET*AHRDAW
Trigger: CCAAGCATCTCTATGTGCCCATGTCTCCAACCTCAG...GTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTCTGACACTGACCACATaGCGCTGCACAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSLTLTT*RCTEGC
Trigger: GCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAG...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp ATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCGTTCTATGCGACACATaGAATGGATGGCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MGKPLSERNFSMHFPAKGVLCDT*NGWLAG
Trigger: ACCTGCAAGCCATCCATTCCATGTGTCGCATAGAAC...GCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTTTGGCTGCTGATCGCTaGCACAGAGCCCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSLAADR*HRAPKL
Trigger: CAGTTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAA...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAAGCCAAAGTGGTGCATaGTACGGCCTACACGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGSQSGA*YGLHGV
Trigger: CACACCGTGTAGGCCGTACCATGCACCACTTTGGCT...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp CTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCAAGGACCTTCAGCATCTaGACAGAAAGATTCCTGATC +
Preference number: 4 (lower is better)
Translates to: LSQKEISQCTSLQRAPAARTFSI*TERFLI
Trigger: GATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCT...TGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
3UTR CAA 72 bp TTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTaGCAGATGGTGCCTGGTGTCTTGAGCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: LQHPFQCRCSVN*QMVPGVLSCVT
Trigger: TGTGACACAGCTCAAGACACCAGGCACCATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGGTAGGCCATGCGGAATaGCACATGGTAAAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LSPLQHPFQCRCSVNLQMVGHAE*HMVKKV
Trigger: TACTTTCTTTACCATGTGGCATTCCGCATGGCCTAC...CATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATACAGAGCCCCAAAACTaGTGTGAGAGCGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHTEPQN*CESGSA
Trigger: AGCAGATCCGCTCTCACATCAGTTTTGGGGCTCTGT...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTCCAGAGCCATCATCTTaGGACAGTGCAGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSPEPSS*DSAGKA
Trigger: AGCTTTACCTGCACTGTCTCAAGATGATGGCTCTGG...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR TCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTGAGCTTCGGCAGTGTTaGGTTGCCACTCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSELRQC*VATQEE
Trigger: TTCTTCTTGAGTGGCAACTCAACACTGCCGAAGCTC...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGCTGGCGATACTCTaGGTCAAAGCGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHLLAIL*VKAFKG
Trigger: CCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAG...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR GCA 90 bp CCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAAAACCAGAGTATACCTaGAGGAAAAACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVSSPKGMGKPLSERNFSKPEYT*RKNLPL
Trigger: CAGAGGCAGGTTTTTCCTGCAGGTATACTCTGGTTT...TGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
3UTR CAA 72 bp CTCTTTTCAAACCTTTTGAAACTCCTTATGCTCTGCTaGAGTTCTCGTTGCCACAGGAGGTTGGAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LFSNLLKLLMLC*SSRCHRRLELL
Trigger: TAGAAGCTCCAACCTCCTGTGGCAACGAGAACTCAAGCAGAGCATAAGGAGTTTCAAAAGGTTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp ATGGATACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATTGCTTCCGGTACACTTaGCAGGAACTTGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: MDTEGKLSSVFPTFLCSHCFRYT*QELGHK
Trigger: TTTGTGCCCAAGTTCCTGCCAAGTGTACCGGAAGCA...ATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp ACCTCTTGTCATGCTGAAGGGCAGAGAGCAAGTATTTaGACTACCCAAAGGAAATACTTTGTCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSCHAEGQRASI*TTQRKYFVSKL
Trigger: CAGCTTTGAGACAAAGTATTTCCTTTGGGTAGTCAAAATACTTGCTCTCTGCCCTTCAGCATGACAAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR TCA 90 bp TCATTCCTAGTGCCAGAATTATGTCAGATTCTTCCAAATTCAATCTCATTTCACCGAGGAAAGGCAAAATaGCCAGCCGTTAACGGACTC +
Preference number: 4 (lower is better)
Translates to: SFLVPELCQILPNSISFHRGKAK*PAVNGL
Trigger: GAGTCCGTTAACGGCTGGTCATTTTGCCTTTCCTCG...GTGAAATGAGATTGAATTTGGAAGAATCTGACATAATTCTGGCACTAGGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CCA 90 bp ACTGAGGGAAAACTGTCTTCTGTCTTTCCCACATTCTTATGTTCTCATCTGAGTTGCTGTGGTGAGAATTaGGCATGTTTGGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: TEGKLSSVFPTFLCSHLSCCGEN*ACLGHR
Trigger: TCTATGACCCAAACATGCCCAATTCTCACCACAGCA...ACTCAGATGAGAACATAAGAATGTGGGAAAGACAGAAGACAGTTTTCCCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CCA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGATACTGTAGGGTAAGTTaGTCTGGAACTTTAGAACTA +
Preference number: 4 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGYCRVS*SGTLEL
Trigger: TAGTTCTAAAGTTCCAGACCAACTTACCCTACAGTA...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
3UTR CAA 72 bp TCTTCCACACACATTTTAGATCTCTTTTCAAACCTTTaGAAACTCCTTATGCTCTGCTTGAGTTCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSTHILDLFSNL*KLLMLCLSSRC
Trigger: GCAACGAGAACTCAAGCAGAGCATAAGGAGTTTCAAAAGGTTTGAAAAGAGATCTAAAATGTGTGTGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS TCA 90 bp ACTGGCCTCCAAGTGGCAATAGAATGGGCAGTTGCAGGCGAGGGCTaGCGCCGCCGATGTAGGCGCCCCCTGCCGCCAACGCCGCGAACC +
Preference number: 5 (lower is better)
Translates to: TGLQVAIEWAVAGEG*RRRCRRPLPPTPRT
Trigger: GGTTCGCGGCGTTGGCGGCAGGGGGCGCCTACATCGGCGGCGTCAGCCCTCGCCTGCAACTGCCCATTCTATTGCCACTTGGAGGCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp GGGCAGTTGCAGGCGAGGGCTGACGCCGCCGATGTAGGCGCCCCCTaGCGCCAACGCCGCGAACCAGCAGATCCAGATGTACCGAAACTT +
Preference number: 5 (lower is better)
Translates to: GQLQARADAADVGAP*RQRREPADPDVPKL
Trigger: AAGTTTCGGTACATCTGGATCTGCTGGTTCGCGGCGTTGGCGGCAGGGGGCGCCTACATCGGCGGCGTCAGCCCTCGCCTGCAACTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp CGCCCCTTCTCGTCAGGATCCTCAGTCCCGGCATCCCACGGCAGATaGGCGCAGGGCCAGAGGATCTGGCCACAGTTCTTTTCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: RPFSSGSSVPASHGR*AQGQRIWPQFFSGP
Trigger: CGGGCCAGAAAAGAACTGTGGCCAGATCCTCTGGCCCTGCGCCCATCTGCCGTGGGATGCCGGGACTGAGGATCCTGACGAGAAGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CTTGCTGGTGGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCCGTaGCAGGGGCTGCAACTCATAGTGTTCGGAGAATCCTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LAGGCAGVEAGTPAP*QGLQLIVFGESWWP
Trigger: GGGCCACCAGGATTCTCCGAACACTATGAGTTGCAGCCCCTGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp CAGGAGCAGGTAGCCAAAGTGGTGCATGGTACGGCCTACACGGTGTaGCATGCCCCCGGAAGGCACCTGACCCCTGCTGAGGCGCCACAT +
Preference number: 5 (lower is better)
Translates to: QEQVAKVVHGTAYTV*HAPGRHLTPAEAPH
Trigger: ATGTGGCGCCTCAGCAGGGGTCAGGTGCCTTCCGGGGGCATGCCACACCGTGTAGGCCGTACCATGCACCACTTTGGCTACCTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 90 bp GCGGCTCAGGTAGCTGCCGTAGAAGGCTGCGCTGGTGGTGAGGCCTaGGACCAGGAGCAGGTAGCCAAAGTGGTGCATGGTACGGCCTAC +
Preference number: 5 (lower is better)
Translates to: AAQVAAVEGCAGGEA*DQEQVAKVVHGTAY
Trigger: GTAGGCCGTACCATGCACCACTTTGGCTACCTGCTCCTGGTCTCAGGCCTCACCACCAGCGCAGCCTTCTACGGCAGCTACCTGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 90 bp GAGGCAAACAACACTCCAGTCGTCATCGCCGTGGCCCGGCTGATCTaGCGTAAAGAGAAGGCCACACGGCTCAGGCGGTCCGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: EANNTPVVIAVARLI*RKEKATRLRRSGCG
Trigger: CCCACACCCGGACCGCCTGAGCCGTGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCACGGCGATGACGACTGGAGTGTTGTTTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTGGTGGCTGTaGTGGTGTCGAAGCTGGGACTCCGGCGCCGTGCCAGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LQRVWKADGKACWWL*WCRSWDSGAVPGAA
Trigger: TGCAGCCCCTGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp AAGGCCGATGGGAAAGCTTGCTGGTGGCTGTGCTGGTGTCGAAGCTaGGACTCCGGCGCCGTGCCAGGGGCTGCAACTCATAGTGTTCGG +
Preference number: 5 (lower is better)
Translates to: KADGKACWWLCWCRS*DSGAVPGAATHSVR
Trigger: CCGAACACTATGAGTTGCAGCCCCTGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp GCAGGTCTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTGGTaGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCCGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGLQRVWKADGKACW*LCWCRSWDSGAVPG
Trigger: CCCTGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp GCACGGCCAGATAGTTGCCCAAGGACCAGCTGGGGCAGCACTCATTGGCTGCTGGTACCGGAGCACCGGTaGGGTCTTCAAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: ARPDSCPRTSWGSTHWLLVPEHR*GLQGDR
Trigger: CCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGTAC...CAGCAGCCAATGAGTGCTGCCCCAGCTGGTCCTTGGGCAACTATCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS TCA 90 bp CACCAGAGGCAAACAACACTCCAGTCGTCATCGCCGTGGCCCGGCTaGTCTGACGTAAAGAGAAGGCCACACGGCTCAGGCGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: HQRQTTLQSSSPWPG*SDVKRRPHGSGGPG
Trigger: ACCCGGACCGCCTGAGCCGTGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCACGGCGATGACGACTGGAGTGTTGTTTGCCTCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp TGGCACGTGGGCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTGCAAGCATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: WHVGLGQVAGSRLHTPCKHGMDG*QVPQAS
Trigger: GGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATG...CTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS TCA 90 bp CTGGGCCTCCGGGCTGCTAGGCGAGAAGTCAGGATCACTTACCACTaGGCTGTTGGTGCGAGGGTCCAGGGGATCACTAGTGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: LGLRAARREVRITYH*AVGARVQGITSVHW
Trigger: CCAGTGGACACTAGTGATCCCCTGGACCCTCGCACCAACAGCTCAGTGGTAAGTGATCCTGACTTCTCGCCTAGCAGCCCGGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp TCTGCAGGTCTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTaGTGGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: SAGLQRVWKADGKAC*WLCWCRSWDSGAVP
Trigger: TGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGGTACCGGAGCACCGGTaGGGTCTTCAAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKVPEHR*GLQGDR
Trigger: CCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGTAC...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATAGGCTTGGGTAGTGTCTaGGCAGGAGGAGCGGTTAGA +
Preference number: 5 (lower is better)
Translates to: SQGPRALKLTLRRRQGAIGLGSV*AGGAVR
Trigger: TCTAACCGCTCCTCCTGCCAAGACACTACCCAAGCC...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CATAGATCAGGACCCAGGCGGCCACAGCTAGGGCTCTCCATCCACTaGTGTAAGGCTTCCACTAAACACAGCGTAGGCCAGCCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: HRSGPRRPQLGLSIH*CKASTKHSVGQPSG
Trigger: GCCAGAGGGCTGGCCTACGCTGTGTTTAGTGGAAGCCTTACAGCAGTGGATGGAGAGCCCTAGCTGTGGCCGCCTGGGTCCTGATCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp AAGAACCAGCAAGCCCACCGTGAGCAGTACGGTGCCAGCCACAGCTaGCACAGAGAACAGACTGAGGGGGACATTCCAGGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: KNQQAHREQYGASHS*HREQTEGDIPGAQQ
Trigger: CTGCTGAGCACCTGGAATGTCCCCCTCAGTCTGTTCTCTGTGGCAGCTGTGGCTGGCACCGTACTGCTCACGGTGGGCTTGCTGGTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp GTATCTGCAGGTCTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTaGTGGTGGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: VSAGLQRVWKADGKA*WWLCWCRSWDSGAV
Trigger: CACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp TATGGAGAGGAGGTCTGCAGGGCTGGACACTGGCTGAAGACTGTCTaGTGGTCTAGGAGCAGATCCCTTGGGGAGACAGGGGCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: YGEEVCRAGHWLKTV*WSRSRSLGETGAWA
Trigger: TGCCCAAGCCCCTGTCTCCCCAAGGGATCTGCTCCTAGACCACCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCAGACCTCCTCTCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp GGCATGTCCCCAGCCAGCTCACCTGCTCCTGTTCTATGCGACACATaGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GMSPASSPAPVLCDT*NGWLAGSTGFPQRW
Trigger: CCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGGCTGGGGACATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CAA 90 bp CAGCTGCTAACTGGAGCCTCAGGCACTTCCCATGTGTGTGACAGTGCTCGGCGGAGAGAAAGCAGATTCTaGGGGCCAGTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QLLTGASGTSHVCDSARRRESRF*GPVRAC
Trigger: GCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCT...CCGCCGAGCACTGTCACACACATGGGAAGTGCCTGAGGCTCCAGTTAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp GCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTGCAAGGACCTTCAGCACACAAACACCAGCTTaGCATGGCTCTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: AWDRWQEAGSIPPARTFSTQTPA*HGSSQG
Trigger: GCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGT...GCTGAAGGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp GCACGGCCAGATAGTTGCCCAAGGACCAGCTGGGGCAGCACTCATTGGCTGCTGCATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: ARPDSCPRTSWGSTHWLLHGMDG*QVPQAS
Trigger: GGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATG...CAGCAGCCAATGAGTGCTGCCCCAGCTGGTCCTTGGGCAACTATCTGGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS GCA 90 bp TGGTGGTCTAGGAGCAGATCCCTTGGGGAGACAGGGGCTTGGGCATaGTGGAGGCAGCAGCTGCCATCATGTATCTGCAGGTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: WWSRSRSLGETGAWA*WRQQLPSCICRSSE
Trigger: CTCTGAAGACCTGCAGATACATGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGTCTCCCCAAGGGATCTGCTCCTAGACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp TCCACTTTGGACTTAGGGCAGTGGGCAGGGCCTTCTGGCAGTGCCTaGAGGGGCTCAGTTTTCTGTCCCTGGGAATCTTGCCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: STLDLGQWAGPSGSA*RGSVFCPWESCLIQ
Trigger: CTGGATCAGGCAAGATTCCCAGGGACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAAAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CACGTGGGCCTGGGACAGGTGGCAGGAAGCAGGCTCCATACCCCCTaGAAGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: HVGLGQVAGSRLHTP*KDLQHLDRKIPDLL
Trigger: GAGCAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGCAGGGGGTATGGAGCCTGCTTCCTGCCACCTGTCCCAGGCCCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS GCA 90 bp CCATACCCTGGCATGTCCCCAGCCAGCTCACCTGCTCCTGTTCTATaGGACACATGGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: PYPGMSPASSPAPVL*DTWNGWLAGSTGFP
Trigger: GGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGGCTGGGGACATGCCAGGGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CCA 90 bp CAGGATTCCCCACACCAGAACCACTGGCAAGTTGCCGCCCTCGTTTaGAGGCAGATCCTCGAACAGGAACTGCTGGCGATACTCTGCGTC +
Preference number: 5 (lower is better)
Translates to: QDSPHQNHWQVAALV*RQILEQELLAILCV
Trigger: GACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGGGAATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp ACTGTCTGGTGGTCTAGGAGCAGATCCCTTGGGGAGACAGGGGCTTaGGCATGCTGGAGGCAGCAGCTGCCATCATGTATCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: TVWWSRSRSLGETGA*ACWRQQLPSCICRS
Trigger: AGACCTGCAGATACATGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGTCTCCCCAAGGGATCTGCTCCTAGACCACCAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp AGAGGTGTAGGTGCTGGGCCTACGGAGCCAAACATCTGGGAGATCTaGCTGACTGTTGGGAAGCATCACAGGGCTGATATCGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RGVGAGPTEPNIWEI*LTVGKHHRADIAWP
Trigger: GGGCCAGGCGATATCAGCCCTGTGATGCTTCCCAACAGTCAGCCAGATCTCCCAGATGTTTGGCTCCGTAGGCCCAGCACCTACACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp GTCCCCAGCCAGCTCACCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: VPSQLTCSCSMRHME*MACRFHRLPPEVDT
Trigger: TGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGGCTGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CCA 90 bp CAGGTACACGAACGGAGCCCTCCTGCTCCTGTTCTATGCGACACATaGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QVHERSPPAPVLCDT*NGWLAGSTGFPQRW
Trigger: CCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGTACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp CCGGTCTACTCAGACTACAACTCTTTCTGGAGGTGGAGGCCCCAAGGGGAGGGAAGAGAAAGCAGATTCTaGGGGCCAGTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PVYSDYNSFWRWRPQGEGRESRF*GPVRAC
Trigger: GCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCT...TCCCTCCCCTTGGGGCCTCCACCTCCAGAAAGAGTTGTAGTCTGAGTAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp GAGCGGATCTGTAGGGCACACAGGAGTGGGGGAGTGAAGCTCAGAGGGAAATCCAGAGAAAGCAGATTCTaGGGGCCAGTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ERICRAHRSGGVKLRGKSRESRF*GPVRAC
Trigger: GCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCT...GGATTTCCCTCTGAGCTTCACTCCCCCACTCCTGTGTGCCCTACAGATCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CAA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCCTGGGGCAGCACTCATaGGCTGCTGATCGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCLGQHS*AADRWH
Trigger: GTGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAG...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CCCAAGGGGAGGGAGGGCTCACAAAGAGAGGCTCAAGCAAAGAGACTGGGTAACGTGAACCAACCCTGGTaGAGGCCAGGAGGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: PKGREGSQREAQAKRLGNVNQPW*RPGGAL
Trigger: CAAGGCACCTCCTGGCCTCAACCAGGGTTGGTTCAC...GTTACCCAGTCTCTTTGCTTGAGCCTCTCTTTGTGAGCCCTCCCTCCCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 90 bp CAGCCTGCTTATATGGAGAGGAGGTCTGCAGGGCTGGACACTGGCTaGAGACTGTCTGGTGGTCTAGGAGCAGATCCCTTGGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: QPAYMERRSAGLDTG*RLSGGLGADPLGRQ
Trigger: CTGTCTCCCCAAGGGATCTGCTCCTAGACCACCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCAGACCTCCTCTCCATATAAGCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp TGGAGCACCACGGTGGCGGGAAGCCAGAGCAGTGTGAGCCCCATGTaGACTAGTACAGCAGTGCCCATGAAAAGAGCAAAGCAACGCACT +
Preference number: 5 (lower is better)
Translates to: WSTTVAGSQSSVSPM*TSTAVPMKRAKQRT
Trigger: AGTGCGTTGCTTTGCTCTTTTCATGGGCACTGCTGTACTAGTGCACATGGGGCTCACACTGCTCTGGCTTCCCGCCACCGTGGTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp GCCAGGGCCAGACCAAGCACGACAGCTGGCTCTGTGCTTAGACTATaGTGCAAGCTGTACAGCTCCAAGTTGCTGGTGAACCAACCCTGG +
Preference number: 5 (lower is better)
Translates to: ARARPSTTAGSVLRL*CKLYSSKLLVNQPW
Trigger: CCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGGTCTGGCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CTCTTCCACTTTGGACTTAGGGCAGTGGGCAGGGCCTTCTGGCAGTaGCTGCAGGGGCTCAGTTTTCTGTCCCTGGGAATCTTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: LFHFGLRAVGRAFWQ*LQGLSFLSLGILPD
Trigger: ATCAGGCAAGATTCCCAGGGACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAAAGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp GAGCCCTCCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: EPSCSCSMRHMEWMA*RFHRLPPEVDTNTS
Trigger: GCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 90 bp ACATGGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTaGACACAAACACCAGCTTTGCATGGCTCTTCTCAGGGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: TWNGWLAGSTGFPQR*TQTPALHGSSQGGH
Trigger: GTGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CCA 90 bp GGGATCACTAGTGTCCACTGGCAGGATTCCCCACACCAGAACCACTaGCAAGTTGCCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: GITSVHWQDSPHQNH*QVAALVWRQILEQE
Trigger: TTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGCCAGTGGACACTAGTGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp GTCTCCTTCAGTGCTAGCCAGAGGGTGTCGCGCTTCCCATTCAGCTaGCCCCGCTCAAGTATGGGGTGTCCAGTGCCATTCATGACTTCT +
Preference number: 5 (lower is better)
Translates to: VSFSASQRVSRFPFS*PRSSMGCPVPFMTS
Trigger: AGAAGTCATGAATGGCACTGGACACCCCATACTTGAGCGGGGCCAGCTGAATGGGAAGCGCGACACCCTCTGGCTAGCACTGAAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp ACACGAACGGAGCCCTCCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: TRTEPSCSCSMRHME*MACRFHRLPPEVDT
Trigger: TGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp AGCCAGGGGCCCAGGGCCCTGAAGCTCACACTCAGGAGGAGACAGGGAGCTATAAAGTTCTCTTCTTCTTaGACTTCCACAGGCCCCACC +
Preference number: 5 (lower is better)
Translates to: SQGPRALKLTLRRRQGAIKFSSS*TSTGPT
Trigger: GGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTT...TATAGCTCCCTGTCTCCTCCTGAGTGTGAGCTTCAGGGCCCTGGGCCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CCGCTGTCCCCATCACAACAGCTGGTGTGGGGCAAAGCTCCCACCTGGGAGTCAAAGTTCTCTTCTTCTTaGACTTCCACAGGCCCCACC +
Preference number: 5 (lower is better)
Translates to: PLSPSQQLVWGKAPTWESKFSSS*TSTGPT
Trigger: GGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTT...TGACTCCCAGGTGGGAGCTTTGCCCCACACCAGCTGTTGTGATGGGGACAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS-3UTR CAA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGCATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKHGMDG*QVPQAS
Trigger: GGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATG...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CTCCTCAGCCATGAAAGAGGCACATCCTTGAAGCCTAAGCTTCAGCTCGGCTGCCTTACCACTGAGCTGTaGGTGCGAGGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LLSHERGTSLKPKLQLGCLTTEL*VRGSRG
Trigger: TCCCCTGGACCCTCGCACCAACAGCTCAGTGGTAAG...GCAGCCGAGCTGAAGCTTAGGCTTCAAGGATGTGCCTCTTTCATGGCTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp GAGCGGATCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: ERICSCSMRHMEWMA*RFHRLPPEVDTNTS
Trigger: GCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp ACAGGGGCTTGGGCATGCTGGAGGCAGCAGCTGCCATCATGTATCTaGAGGTCTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGAWACWRQQLPSCI*RSSESMEGRWESLL
Trigger: CAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATACATGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp ATGACTTCTGGGGAGGTACCCACAGAATCTGGCACACGGACACTATaGTCAGAGGCACAGGTGTCATCTGAGACGCTGAGTCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: MTSGEVPTESGTRTL*SEAQVSSETLSPSR
Trigger: CCTGGAGGGACTCAGCGTCTCAGATGACACCTGTGCCTCTGAGCATAGTGTCCGTGTGCCAGATTCTGTGGGTACCTCCCCAGAAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CAGCTCACCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: QLTCSCSMRHMEWMA*RFHRLPPEVDTNTS
Trigger: GCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS GCA 90 bp CTGACACTACAGGTACACGAACGGAGCCCTCCTGCTCCTGTTCTATaGGACACATGGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LTLQVHERSPPAPVL*DTWNGWLAGSTGFP
Trigger: GGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGTACCTGTAGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 90 bp CGGCAGATGGGCGCAGGGCCAGAGGATCTGGCCACAGTTCTTTTCTaGCCCGAAGAAACAGCACAGGGACTGAAAGAAGAAGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: RQMGAGPEDLATVLF*PEETAQGLKEEAGK
Trigger: TTTGCCAGCTTCTTCTTTCAGTCCCTGTGCTGTTTCTTCGGGCCAGAAAAGAACTGTGGCCAGATCCTCTGGCCCTGCGCCCATCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp GGAGGCAGCAGCTGCCATCATGTATCTGCAGGTCTTCAGAGAGTATaGAAGGCCGATGGGAAAGCTTGCTGGTGGCTGTGCTGGTGTCGA +
Preference number: 5 (lower is better)
Translates to: GGSSCHHVSAGLQRV*KADGKACWWLCWCR
Trigger: TCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATACATGATGGCAGCTGCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp CCAGCCAGCTCACCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACA +
Preference number: 5 (lower is better)
Translates to: PASSPAPVLCDTWNG*LAGSTGFPQRWTQT
Trigger: TGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CCA 90 bp GAACGGAGCCCTCCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACA +
Preference number: 5 (lower is better)
Translates to: ERSPPAPVLCDTWNG*LAGSTGFPQRWTQT
Trigger: TGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp GTCTTGGCAGGAGGAGCGGTTAGACAGCACGGCCAGATAGTTGCCCAAGGACCAACACAAACACCAGCTTaGCATGGCTCTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VLAGGAVRQHGQIVAQGPTQTPA*HGSSQG
Trigger: GCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGT...TGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTAACCGCTCCTCCTGCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS GCA 90 bp GGCAAGTTGCCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGAACTaGTGGCGATACTCTGCGTCAAAGCGTTCAAAGGGATGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: GKLPPSFGGRSSNRN*WRYSASKRSKGWLE
Trigger: TTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp AGGGCCAGACCAAGCACGACAGCTGGCTCTGTGCTTAGACTATGCTaGAAGCTGTACAGCTCCAAGTTGCTGGTGAACCAACCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RARPSTTAGSVLRLC*KLYSSKLLVNQPWL
Trigger: CAACCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGGTCTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp AAGTTGCCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGAACTGCTaGCGATACTCTGCGTCAAAGCGTTCAAAGGGATGGCTAGAACGG +
Preference number: 5 (lower is better)
Translates to: KLPPSFGGRSSNRNC*RYSASKRSKGWLER
Trigger: CCGTTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp CTGCCATCATGTATCTGCAGGTCTTCAGAGAGTATGGAAGGCCGATaGGAAAGCTTGCTGGTGGCTGTGCTGGTGTCGAAGCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: LPSCICRSSESMEGR*ESLLVAVLVSKLGL
Trigger: GAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATACATGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp CTGGCCCTCCACGGCCCTTCCAGGATAAGCTGCTGTGGTGAGAATTaGGCATGTTTGGGTCATAGATGGTCTCCTTCAGTGCTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LALHGPSRISCCGEN*ACLGHRWSPSVLAR
Trigger: TCTGGCTAGCACTGAAGGAGACCATCTATGACCCAAACATGCCCAATTCTCACCACAGCAGCTTATCCTGGAAGGGCCGTGGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp GACAGTGCAGGACAGAGGCCCGTGTTCACTTCCAGCCCAGAGAAGCTTCCCAAGAGAGCTTCGGCAGTGTaGAGTTGCCACTCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: DSAGQRPVFTSSPEKLPKRASAV*SCHSRR
Trigger: TCTTCTTGAGTGGCAACTCAACACTGCCGAAGCTCT...CTTGGGAAGCTTCTCTGGGCTGGAAGTGAACACGGGCCTCTGTCCTGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CTCGTTTGGAGGCAGATCCTCGAACAGGAACTGCTGGCGATACTCTaGGTCAAAGCGTTCAAAGGGATGGCTAGAACGGAAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: LVWRQILEQELLAIL*VKAFKGMARTEELA
Trigger: GGCCAGTTCTTCCGTTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp TTCCTGATCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: FLICSCSMRHMEWMA*RFHRLPPEVDTNTS
Trigger: GCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS GCA 90 bp GCTTCCCACATAGCTGACACTACAGGTACACGAACGGAGCCCTCCTaGTCCTGTTCTATGCGACACATGGAATGGATGGCTTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASHIADTTGTRTEPS*SCSMRHMEWMACRF
Trigger: GAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGTACCTGTAGTGTCAGCTATGTGGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 90 bp TGTGAGAGCGGATCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACA +
Preference number: 5 (lower is better)
Translates to: CESGSAPVLCDTWNG*LAGSTGFPQRWTQT
Trigger: TGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp TGCAAGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTCTCCTCAGTTTCAGTACCGGAGCACCGGTaGGGTCTTCAAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: CKDLQHLDRKIPDLSSVSVPEHR*GLQGDR
Trigger: CCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGTAC...TGAAACTGAGGAGAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCATGGAGGTGCTGAGGTaGGAGACATGGGCACATAGA +
Preference number: 5 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGMEVLR*ETWAHR
Trigger: TCTATGTGCCCATGTCTCCAACCTCAGCACCTCCAT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCACACAAACACCAGCTTaGCATGGCTCTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGTQTPA*HGSSQG
Trigger: GCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CCTTCGTACCTCTTCTGGCAAAGCCTGTCTGTACTCCTCAGCCATGAAAGAGGCACACTTGGCAGGAACTaGGGCACAAAACGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: PSYLFWQSLSVLLSHERGTLGRN*GTKRGF
Trigger: AAACCCCCGTTTTGTGCCCAAGTTCCTGCCAAGTGT...GCCTCTTTCATGGCTGAGGAGTACAGACAGGCTTTGCCAGAAGAGGTACGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 90 bp GGTAAGTTGGTCTGGAACTTTAGAACTAGAGCTGCCAGGTTGCCATaGGTATCGAAGCGGAGTCCCAGGTCACGTGTGCCATCAGGACTT +
Preference number: 5 (lower is better)
Translates to: GKLVWNFRTRAARLP*VSKRSPRSRVPSGL
Trigger: AAGTCCTGATGGCACACGTGACCTGGGACTCCGCTTCGATACTCATGGCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGACCAACTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp TGTAGGGTAAGTTGGTCTGGAACTTTAGAACTAGAGCTGCCAGGTTaGCATGAGTATCGAAGCGGAGTCCCAGGTCACGTGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: CRVSWSGTLELELPG*HEYRSGVPGHVCHQ
Trigger: CTGATGGCACACGTGACCTGGGACTCCGCTTCGATACTCATGGCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGACCAACTTACCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 90 bp CCCCCTGCAAGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTaGTCCTGTTCTATGCGACACATGGAATGGATGGCTTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PPARTFSIWTERFLI*SCSMRHMEWMACRF
Trigger: GAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCTTGCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS CCA 90 bp AACAGGAACTGCTGGCGATACTCTGCGTCAAAGCGTTCAAAGGGATaGCTAGAACGGAAGAACTGGCCTCCAAGTGGCAATAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: NRNCWRYSASKRSKG*LERKNWPPSGNRMG
Trigger: GCCCATTCTATTGCCACTTGGAGGCCAGTTCTTCCGTTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp AGGATAAGCTGCTGTGGTGAGAATTGGGCATGTTTGGGTCATAGATaGTCTCCTTCAGTGCTAGCCAGAGGGTGTCGCGCTTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: RISCCGENWACLGHR*SPSVLARGCRASHS
Trigger: TGAATGGGAAGCGCGACACCCTCTGGCTAGCACTGAAGGAGACCATCTATGACCCAAACATGCCCAATTCTCACCACAGCAGCTTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 90 bp ACAGAAAGATTCCTGATCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: TERFLICSCSMRHME*MACRFHRLPPEVDT
Trigger: TGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAATCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR CAA 90 bp AGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCGTACCGGAGCACCGGTaGGGTCTTCAAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SPKGMGKPLSERNFSMHFVPEHR*GLQGDR
Trigger: CCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGTAC...GAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS TCA 90 bp ATCTGGCCACAGTTCTTTTCTGGCCCGAAGAAACAGCACAGGGACTaGAAGAAGAAGCTGGCAAAGCCACAGCCAAGGAACTTGACCATC +
Preference number: 5 (lower is better)
Translates to: IWPQFFSGPKKQHRD*KKKLAKPQPRNLTI
Trigger: GATGGTCAAGTTCCTTGGCTGTGGCTTTGCCAGCTTCTTCTTTCAGTCCCTGTGCTGTTTCTTCGGGCCAGAAAAGAACTGTGGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp GGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAAGAGAAAGCAGATTCTaGGGGCCAGTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GHGKASLRKKFLNALPCKRESRF*GPVRAC
Trigger: GCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCT...TTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp GCCAGTTCTCCGTTCCATGTCTCTCTCCCTTACAACACCCTTTCCAATGCAGGTTTCGGCAGTGTTGAGTaGCCACTCAAGAAGAACCAG +
Preference number: 5 (lower is better)
Translates to: ASSPFHVSLPYNTLSNAGFGSVE*PLKKNQ
Trigger: CTGGTTCTTCTTGAGTGGCAACTCAACACTGCCGAA...ACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAGACATGGAACGGAGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CTCTCTCCCTTACAACACCCTTTCCAATGCAGGTGTTCAGTAAACTTGCAGATGGGGAGCTCTTCCACTTaGGACTTAGGGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSPLQHPFQCRCSVNLQMGSSST*DLGQWA
Trigger: TGCCCACTGCCCTAAGTCCAAAGTGGAAGAGCTCCC...CATCTGCAAGTTTACTGAACACCTGCATTGGAAAGGGTGTTGTAAGGGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp AAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KASLRKKFLNALPCKGHQHGMDG*QVPQAS
Trigger: GGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATG...CTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp CAGCCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCACACAAACACCAGCTTaGCATGGCTCTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QPVSSPKGMGKPLSERNFTQTPA*HGSSQG
Trigger: GCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGT...GAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS CCA 90 bp ATCCAGATGTACCGAAACTTAATGACACCACAGGGCAGCAGGCGCTaGAAAAGCAGGCGCGAGAGGATGGAAATAATCTTGCGAAAAATA +
Preference number: 5 (lower is better)
Translates to: IQMYRNLMTPQGSRR*KSRRERMEIILRKI
Trigger: TATTTTTCGCAAGATTATTTCCATCCTCTCGCGCCTGCTTTTCCAGCGCCTGCTGCCCTGTGGTGTCATTAAGTTTCGGTACATCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp AAAGCCTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGAAGTTCTCTTCTTCTTaGACTTCCACAGGCCCCACC +
Preference number: 5 (lower is better)
Translates to: KASLRKKFLNALPCKGHQKFSSS*TSTGPT
Trigger: GGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTT...CTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGAAGTTGCCGCCCTCGTTaGGAGGCAGATCCTCGAACA +
Preference number: 5 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGSCRPR*EADPRT
Trigger: TGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACT...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS-3UTR CAA 90 bp CTCTCTCAGAAAGAAATTTCTCAATGCACTTCCCTGCAAAGGGCACCAGCAGCAGGCATGAAGAGAGACTaGGTGCAAAGGCTGAAAATC +
Preference number: 5 (lower is better)
Translates to: LSQKEISQCTSLQRAPAAGMKRD*VQRLKI
Trigger: GATTTTCAGCCTTTGCACCAAGTCTCTCTTCATGCC...TGCTGCTGGTGCCCTTTGCAGGGAAGTGCATTGAGAAATTTCTTTCTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS-3UTR CAA 90 bp CAGCCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTTGTCCAAGCTGTACTaGGTCTTCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QPVSSPKGMGKPLSERNFLSKLY*VFWAQA
Trigger: TGCTTGAGCCCAGAAGACCAAGTACAGCTTGGACAA...GAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp CCAGTAAGTAGTCCAAAGGGCATGGGAAAGCCTCTCTCAGAAAGAAATTTCTCAAAGTTCTCTTCTTCTTaGACTTCCACAGGCCCCACC +
Preference number: 5 (lower is better)
Translates to: PVSSPKGMGKPLSERNFSKFSSS*TSTGPT
Trigger: GGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTT...TGAGAAATTTCTTTCTGAGAGAGGCTTTCCCATGCCCTTTGGACTACTTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063975.10
ENSMUST00000110846.8
CDS-3UTR CAA 90 bp TTCTTAAGGGTTTTTCTAGTCAGTGAGATACTCCAACTGGATCCCAAAGATGGATGTGCCATCAGGACTTaGCTCCAGAGCCATCATCTT +
Preference number: 5 (lower is better)
Translates to: FLRVFLVSEILQLDPKDGCAIRT*LQSHHL
Trigger: AAGATGATGGCTCTGGAGCAAAGTCCTGATGGCACA...TCCATCTTTGGGATCCAGTTGGAGTATCTCACTGACTAGAAAAACCCTTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CAGGCGAGGGCTGACGCCGCCGATGTAGGCGCCCCCTaGCGCCAACGCCGCGAACCAGCAGATCCAGATGTA +
Preference number: 6 (lower is better)
Translates to: QARADAADVGAP*RQRREPADPDV
Trigger: TACATCTGGATCTGCTGGTTCGCGGCGTTGGCGGCAGGGGGCGCCTACATCGGCGGCGTCAGCCCTCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp CAAGTGGCAATAGAATGGGCAGTTGCAGGCGAGGGCTaGCGCCGCCGATGTAGGCGCCCCCTGCCGCCAACG +
Preference number: 6 (lower is better)
Translates to: QVAIEWAVAGEG*RRRCRRPLPPT
Trigger: CGTTGGCGGCAGGGGGCGCCTACATCGGCGGCGTCAGCCCTCGCCTGCAACTGCCCATTCTATTGCCACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp GCGTGGACACGGTTGGTGGTGGTACCGGAGCACCGGTaGGGTCTTCAAGGGGACAGGTGTGGAGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: AWTRLVVVPEHR*GLQGDRCGGSS
Trigger: GCTGCTCCCTCCACACCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGTACCACCACCAACCGTGTCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS TCA 72 bp CGGCCTACACGGTGTGGCATGCCCCCGGAAGGCACCTaGCCCCTGCTGAGGCGCCACATATCCAAGAAGATG +
Preference number: 6 (lower is better)
Translates to: RPTRCGMPPEGT*PLLRRHISKKM
Trigger: CATCTTCTTGGATATGTGGCGCCTCAGCAGGGGTCAGGTGCCTTCCGGGGGCATGCCACACCGTGTAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCCGTaGCAGGGGCTGCAACTCATAGTGTTCGGAGAATCC +
Preference number: 6 (lower is better)
Translates to: GCAGVEAGTPAP*QGLQLIVFGES
Trigger: GGATTCTCCGAACACTATGAGTTGCAGCCCCTGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GTATGGAAGGCCGATGGGAAAGCTTGCTGGTGGCTGTaGTGGTGTCGAAGCTGGGACTCCGGCGCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: VWKADGKACWWL*WCRSWDSGAVP
Trigger: TGGCACGGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GTAGCCAAAGTGGTGCATGGTACGGCCTACACGGTGTaGCATGCCCCCGGAAGGCACCTGACCCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: VAKVVHGTAYTV*HAPGRHLTPAE
Trigger: CTCAGCAGGGGTCAGGTGCCTTCCGGGGGCATGCCACACCGTGTAGGCCGTACCATGCACCACTTTGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GGCCTGAGACCAGGAGCAGGTAGCCAAAGTGGTGCATaGTACGGCCTACACGGTGTGGCATGCCCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: GLRPGAGSQSGA*YGLHGVACPRK
Trigger: CTTCCGGGGGCATGCCACACCGTGTAGGCCGTACCATGCACCACTTTGGCTACCTGCTCCTGGTCTCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CCATCGGGGAGCTCTTCCACTTTGGACTTAGGGCAGTaGGCAGGGCCTTCTGGCAGTGCCTGCAGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: PSGSSSTLDLGQ*AGPSGSACRGS
Trigger: TGAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAAAGTGGAAGAGCTCCCCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp AACACTCCAGTCGTCATCGCCGTGGCCCGGCTGATCTaGCGTAAAGAGAAGGCCACACGGCTCAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: NTPVVIAVARLI*RKEKATRLRRS
Trigger: GGACCGCCTGAGCCGTGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCACGGCGATGACGACTGGAGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GGGGTGGGGCCAGCCTGCTTATATGGAGAGGAGGTCTaGAGGGCTGGACACTGGCTGAAGACTGTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: GVGPACLYGEEV*RAGHWLKTVWW
Trigger: CCACCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCAGACCTCCTCTCCATATAAGCAGGCTGGCCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp ACCGGAGCACCGGTTGGGTCTTCAAGGGGACAGGTGTaGAGGGAGCAGCTTCTCTCTGGGCTTGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TGAPVGSSRGQV*REQLLSGLASG
Trigger: TCCTGAGGCAAGCCCAGAGAGAAGCTGCTCCCTCCACACCTGTCCCCTTGAAGACCCAACCGGTGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CCA 72 bp TCGTCAGGATCCTCAGTCCCGGCATCCCACGGCAGATaGGCGCAGGGCCAGAGGATCTGGCCACAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSGSSVPASHGR*AQGQRIWPQFF
Trigger: AAAGAACTGTGGCCAGATCCTCTGGCCCTGCGCCCATCTGCCGTGGGATGCCGGGACTGAGGATCCTGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTGGTaGCTGTGCTGGTGTCGAAGCTGGGACTCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: QRVWKADGKACW*LCWCRSWDSGA
Trigger: GGCGCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp GCTGAGGAGCACAGGCCATCGGGGAGCTCTTCCACTTaGGACTTAGGGCAGTGGGCAGGGCCTTCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: AEEHRPSGSSST*DLGQWAGPSGS
Trigger: ACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAAAGTGGAAGAGCTCCCCGATGGCCTGTGCTCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GGACCCAGGCGGCCACAGCTAGGGCTCTCCATCCACTaGTGTAAGGCTTCCACTAAACACAGCGTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GPRRPQLGLSIH*CKASTKHSVGQ
Trigger: CTGGCCTACGCTGTGTTTAGTGGAAGCCTTACAGCAGTGGATGGAGAGCCCTAGCTGTGGCCGCCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GACTTAGGGCAGTGGGCAGGGCCTTCTGGCAGTGCCTaGAGGGGCTCAGTTTTCTGTCCCTGGGAATCTTGC +
Preference number: 6 (lower is better)
Translates to: DLGQWAGPSGSA*RGSVFCPWESC
Trigger: GCAAGATTCCCAGGGACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GCATCCCACGGCAGATGGGCGCAGGGCCAGAGGATCTaGCCACAGTTCTTTTCTGGCCCGAAGAAACAGCAC +
Preference number: 6 (lower is better)
Translates to: ASHGRWAQGQRI*PQFFSGPKKQH
Trigger: GTGCTGTTTCTTCGGGCCAGAAAAGAACTGTGGCCAGATCCTCTGGCCCTGCGCCCATCTGCCGTGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GAGGTCTGCAGGGCTGGACACTGGCTGAAGACTGTCTaGTGGTCTAGGAGCAGATCCCTTGGGGAGACAGGG +
Preference number: 6 (lower is better)
Translates to: EVCRAGHWLKTV*WSRSRSLGETG
Trigger: CCCTGTCTCCCCAAGGGATCTGCTCCTAGACCACCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp AGTGCTAGCCAGAGGGTGTCGCGCTTCCCATTCAGCTaGCCCCGCTCAAGTATGGGGTGTCCAGTGCCATTC +
Preference number: 6 (lower is better)
Translates to: SASQRVSRFPFS*PRSSMGCPVPF
Trigger: GAATGGCACTGGACACCCCATACTTGAGCGGGGCCAGCTGAATGGGAAGCGCGACACCCTCTGGCTAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp CAAACAACACTCCAGTCGTCATCGCCGTGGCCCGGCTaGTCTGACGTAAAGAGAAGGCCACACGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: QTTLQSSSPWPG*SDVKRRPHGSG
Trigger: GCCTGAGCCGTGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCACGGCGATGACGACTGGAGTGTTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp TACAGCAGTGCCCATGAAAAGAGCAAAGCAACGCACTaGGGGCAGGCGGCTCAGGTAGCTGCCGTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: YSSAHEKSKATH*GQAAQVAAVEG
Trigger: GCCTTCTACGGCAGCTACCTGAGCCGCCTGCCCGCAGTGCGTTGCTTTGCTCTTTTCATGGGCACTGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CTGGCAGGATTCCCCACACCAGAACCACTGGCAAGTTaGCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGA +
Preference number: 6 (lower is better)
Translates to: LAGFPTPEPLAS*RPRLEADPRTG
Trigger: TCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp TTTGGACTTAGGGCAGTGGGCAGGGCCTTCTGGCAGTaGCTGCAGGGGCTCAGTTTTCTGTCCCTGGGAATC +
Preference number: 6 (lower is better)
Translates to: FGLRAVGRAFWQ*LQGLSFLSLGI
Trigger: GATTCCCAGGGACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGGCCCTGCCCACTGCCCTAAGTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTGCTaGTGGCTGTGCTGGTGTCGAAGCTGGGACTCCGGC +
Preference number: 6 (lower is better)
Translates to: LQRVWKADGKAC*WLCWCRSWDSG
Trigger: GCCGGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp TGGTCTAGGAGCAGATCCCTTGGGGAGACAGGGGCTTaGGCATGCTGGAGGCAGCAGCTGCCATCATGTATC +
Preference number: 6 (lower is better)
Translates to: WSRSRSLGETGA*ACWRQQLPSCI
Trigger: GATACATGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGTCTCCCCAAGGGATCTGCTCCTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp TCTTCTTCTTTGACTTCCACAGGCCCCACCATCCTCTaGGTCCGGACCACACTTTCCTCGGCCCTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SSSLTSTGPTIL*VRTTLSSALPQ
Trigger: CTGGGGCAGGGCCGAGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGCCTGTGGAAGTCAAAGAAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CAA 72 bp CCCACACCAGAACCACTGGCAAGTTGCCGCCCTCGTTaGGAGGCAGATCCTCGAACAGGAACTGCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: PTPEPLASCRPR*EADPRTGTAGD
Trigger: ATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp GCAGGATTCCCCACACCAGAACCACTGGCAAGTTGCCGCCCTCGTTaGGAGGCAGATCCTCGAACAGGAACTGCTGGCGATACTCTGCGT +
Preference number: 6 (lower is better)
Translates to: AGFPTPEPLASCRPR*EADPRTGTAGDTLR
Trigger: ACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp CTAGTGTCCACTGGCAGGATTCCCCACACCAGAACCACTGGCAAGTaGCCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: LVSTGRIPHTRTTGK*PPSFGGRSSNRNCW
Trigger: CCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGCCAGTGGACACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp TCCGGGCTGCTAGGCGAGAAGTCAGGATCACTTACCACTGAGCTGTaGGTGCGAGGGTCCAGGGGATCACTAGTGTCCACTGGCAGGATT +
Preference number: 6 (lower is better)
Translates to: SGLLGEKSGSLTTEL*VRGSRGSLVSTGRI
Trigger: AATCCTGCCAGTGGACACTAGTGATCCCCTGGACCCTCGCACCAACAGCTCAGTGGTAAGTGATCCTGACTTCTCGCCTAGCAGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp TGCTGCAAGCTGTACAGCTCCAAGTTGCTGGTGAACCAACCCTGGTaGAGGCCAGGAGGTGCCTTGCTCATCTCGGTTGACAACCAGCGG +
Preference number: 6 (lower is better)
Translates to: CCKLYSSKLLVNQPW*RPGGALLISVDNQR
Trigger: CCGCTGGTTGTCAACCGAGATGAGCAAGGCACCTCCTGGCCTCAACCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp GGAGCCCTCCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAG +
Preference number: 6 (lower is better)
Translates to: GALLLLFYATHGMDG*QVPQASPRGGHKHQ
Trigger: CTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS TCA 72 bp CGGGCTGCTAGGCGAGAAGTCAGGATCACTTACCACTaGGCTGTTGGTGCGAGGGTCCAGGGGATCACTAGT +
Preference number: 6 (lower is better)
Translates to: RAARREVRITYH*AVGARVQGITS
Trigger: ACTAGTGATCCCCTGGACCCTCGCACCAACAGCTCAGTGGTAAGTGATCCTGACTTCTCGCCTAGCAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GGTCTTCAGAGAGTATGGAAGGCCGATGGGAAAGCTTaGTGGTGGCTGTGCTGGTGTCGAAGCTGGGACTCC +
Preference number: 6 (lower is better)
Translates to: GLQRVWKADGKA*WWLCWCRSWDS
Trigger: GGAGTCCCAGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CCACACCAGAACCACTGGCAAGTTGCCGCCCTCGTTTaGAGGCAGATCCTCGAACAGGAACTGCTGGCGATA +
Preference number: 6 (lower is better)
Translates to: PHQNHWQVAALV*RQILEQELLAI
Trigger: TATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCAACTTGCCAGTGGTTCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GTTGGTGCGAGGGTCCAGGGGATCACTAGTGTCCACTaGCAGGATTCCCCACACCAGAACCACTGGCAAGTT +
Preference number: 6 (lower is better)
Translates to: VGARVQGITSVH*QDSPHQNHWQV
Trigger: AACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGCCAGTGGACACTAGTGATCCCCTGGACCCTCGCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CCTCCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PPAPVLCDTWNG*LAGSTGFPQRW
Trigger: CCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 72 bp GAGCCCTCCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: EPSCSCSMRHME*MACRFHRLPPE
Trigger: CTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 72 bp GAACGGAGCCCTCCTGCTCCTGTTCTATGCGACACATaGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: ERSPPAPVLCDT*NGWLAGSTGFP
Trigger: GGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CAA 90 bp AGTGCGTTCCTGCCTGACACTGACCACATGGCGCTGCACAGAAGGTaGCTTCCAGACCCCATCATGCTGAGAGGTGTCTATGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SAFLPDTDHMALHRR*LPDPIMLRGVYGGA
Trigger: AGCACCTCCATAGACACCTCTCAGCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAGGCAGGAACGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CAA 90 bp GCTGGCTCTGTGCTTAGACTATGCTGCAAGCTGTACAGCTCCAAGTaGCTGGTGAACCAACCCTGGTTGAGGCCAGGAGGTGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: AGSVLRLCCKLYSSK*LVNQPWLRPGGALL
Trigger: GAGCAAGGCACCTCCTGGCCTCAACCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp CCAGCTCACCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAG +
Preference number: 6 (lower is better)
Translates to: PAHLLLFYATHGMDG*QVPQASPRGGHKHQ
Trigger: CTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS TCA 72 bp CTGGGCCTACGGAGCCAAACATCTGGGAGATCTGGCTaGCTGTTGGGAAGCATCACAGGGCTGATATCGCCT +
Preference number: 6 (lower is better)
Translates to: LGLRSQTSGRSG*LLGSITGLISP
Trigger: AGGCGATATCAGCCCTGTGATGCTTCCCAACAGTCAGCCAGATCTCCCAGATGTTTGGCTCCGTAGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp ACGGTGGCGGGAAGCCAGAGCAGTGTGAGCCCCATGTaGACTAGTACAGCAGTGCCCATGAAAAGAGCAAAG +
Preference number: 6 (lower is better)
Translates to: TVAGSQSSVSPM*TSTAVPMKRAK
Trigger: CTTTGCTCTTTTCATGGGCACTGCTGTACTAGTGCACATGGGGCTCACACTGCTCTGGCTTCCCGCCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CCGCCCTCGTTTGGAGGCAGATCCTCGAACAGGAACTaGTGGCGATACTCTGCGTCAAAGCGTTCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: PPSFGGRSSNRN*WRYSASKRSKG
Trigger: TCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GTGCCAGGGCCAGACCAAGCACGACAGCTGGCTCTGTaGTTAGACTATGCTGCAAGCTGTACAGCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: VPGPDQARQLAL*LDYAASCTAPS
Trigger: ACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGGTCTGGCCCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GGCATGTCCCCAGCCAGCTCACCTGCTCCTGTTCTATaGGACACATGGAATGGATGGCTTGCAGGTTCCACA +
Preference number: 6 (lower is better)
Translates to: GMSPASSPAPVL*DTWNGWLAGST
Trigger: TGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTGGCTGGGGACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CCA 72 bp GGATCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GSAPVLCDTWNG*LAGSTGFPQRW
Trigger: CCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GAGCGGATCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: ERICSCSMRHME*MACRFHRLPPE
Trigger: CTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GGTGCTGGGCCTACGGAGCCAAACATCTGGGAGATCTaGCTGACTGTTGGGAAGCATCACAGGGCTGATATC +
Preference number: 6 (lower is better)
Translates to: GAGPTEPNIWEI*LTVGKHHRADI
Trigger: GATATCAGCCCTGTGATGCTTCCCAACAGTCAGCCAGATCTCCCAGATGTTTGGCTCCGTAGGCCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp TCACCTGCTCCTGTTCTATGCGACACATGGAATGGATaGCTTGCAGGTTCCACAGGCTTCCCCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SPAPVLCDTWNG*LAGSTGFPQRW
Trigger: CCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CCA 72 bp CAGCTCACCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: QLTCSCSMRHME*MACRFHRLPPE
Trigger: CTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110843.2
CDS CAA 72 bp CTGGTGAACCAACCCTGGTTGAGGCCAGGAGGTGCCTaGCTCATCTCGGTTGACAACCAGCGGCTGATTTCA +
Preference number: 6 (lower is better)
Translates to: LVNQPWLRPGGA*LISVDNQRLIS
Trigger: TGAAATCAGCCGCTGGTTGTCAACCGAGATGAGCAAGGCACCTCCTGGCCTCAACCAGGGTTGGTTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp AGAGCGGATCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAG +
Preference number: 6 (lower is better)
Translates to: RADLLLFYATHGMDG*QVPQASPRGGHKHQ
Trigger: CTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp GGCAGCAGGCGCTGGAAAAGCAGGCGCGAGAGGATGGAAATAATCTaGCGAAAAATACGGATCCGTCTGTGCAACGCCAGCAACAGCCTC +
Preference number: 6 (lower is better)
Translates to: GSRRWKSRRERMEII*RKIRIRLCNASNSL
Trigger: GAGGCTGTTGCTGGCGTTGCACAGACGGATCCGTATTTTTCGCAAGATTATTTCCATCCTCTCGCGCCTGCTTTTCCAGCGCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp CGCTGCACAGAAGGTTGCTTCCAGACCCCATCATGCTaGGAGGTGTCTATGGAGGTGCTGAGGTTGGAGACA +
Preference number: 6 (lower is better)
Translates to: RCTEGCFQTPSC*EVSMEVLRLET
Trigger: TGTCTCCAACCTCAGCACCTCCATAGACACCTCTCAGCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS TCA 72 bp GCTGCTGATCGCTGGCACAGAGCCCCAAAACTGATGTaGGAGCGGATCTGCTCCTGTTCTATGCGACACATG +
Preference number: 6 (lower is better)
Translates to: AADRWHRAPKLM*ERICSCSMRHM
Trigger: CATGTGTCGCATAGAACAGGAGCAGATCCGCTCTCACATCAGTTTTGGGGCTCTGTGCCAGCGATCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp CATTGGCTGCTGATCGCTGGCACAGAGCCCCAAAACTaGTGTGAGAGCGGATCTGCTCCTGTTCTATGCGAC +
Preference number: 6 (lower is better)
Translates to: HWLLIAGTEPQN*CESGSAPVLCD
Trigger: GTCGCATAGAACAGGAGCAGATCCGCTCTCACATCAGTTTTGGGGCTCTGTGCCAGCGATCAGCAGCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp CTGGTTGAGGCCAGGAGGTGCCTTGCTCATCTCGGTTaGCAACCAGCGGCTGATTTCAGTGTAGAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: LVEARRCLAHLG*QPAADFSVEVV
Trigger: CACCACTTCTACACTGAAATCAGCCGCTGGTTGTCAACCGAGATGAGCAAGGCACCTCCTGGCCTCAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CAGGCTTCCCCCAGAGGTGGACACAAACACCAGCTTTaGATGGCTCTTCTCAGGGCGGCCACAAAAGAAGTT +
Preference number: 6 (lower is better)
Translates to: QASPRGGHKHQL*MALLRAATKEV
Trigger: AACTTCTTTTGTGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS GCA 72 bp TGCTCCTGTTCTATGCGACACATGGAATGGATGGCTTaGAGGTTCCACAGGCTTCCCCCAGAGGTGGACACA +
Preference number: 6 (lower is better)
Translates to: CSCSMRHMEWMA*RFHRLPPEVDT
Trigger: TGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS GCA 72 bp GAGGCAGAGAGAAAGAGAGCTTCGGCAGTGTTGAGTTaGCACTCAAGAAGAACCAGCAAGCCCACCGTGAGC +
Preference number: 6 (lower is better)
Translates to: EAERKRASAVLS*HSRRTSKPTVS
Trigger: GCTCACGGTGGGCTTGCTGGTTCTTCTTGAGTGGCAACTCAACACTGCCGAAGCTCTCTTTCTCTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp TGGGCATGCTGGAGGCAGCAGCTGCCATCATGTATCTaGAGGTCTTCAGAGAGTATGGAAGGCCGATGGGAA +
Preference number: 6 (lower is better)
Translates to: WACWRQQLPSCI*RSSESMEGRWE
Trigger: TTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATACATGATGGCAGCTGCTGCCTCCAGCATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp TATCGCCTGGCCCTCCACGGCCCTTCCAGGATAAGCTaGTGTGGTGAGAATTGGGCATGTTTGGGTCATAGA +
Preference number: 6 (lower is better)
Translates to: YRLALHGPSRIS*CGENWACLGHR
Trigger: TCTATGACCCAAACATGCCCAATTCTCACCACAGCAGCTTATCCTGGAAGGGCCGTGGAGGGCCAGGCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CAGGTACACGAACGGAGCCCTCCTGCTCCTGTTCTATaGGACACATGGAATGGATGGCTTGCAGGTTCCACA +
Preference number: 6 (lower is better)
Translates to: QVHERSPPAPVL*DTWNGWLAGST
Trigger: TGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 72 bp TGTGAGAGCGGATCTGCTCCTGTTCTATGCGACACATaGAATGGATGGCTTGCAGGTTCCACAGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: CESGSAPVLCDT*NGWLAGSTGFP
Trigger: GGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CCCTCGTTTGGAGGCAGATCCTCGAACAGGAACTGCTaGCGATACTCTGCGTCAAAGCGTTCAAAGGGATGG +
Preference number: 6 (lower is better)
Translates to: PSFGGRSSNRNC*RYSASKRSKGW
Trigger: CCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp GGCGCAGGGCCAGAGGATCTGGCCACAGTTCTTTTCTaGCCCGAAGAAACAGCACAGGGACTGAAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: GAGPEDLATVLF*PEETAQGLKEE
Trigger: TTCTTCTTTCAGTCCCTGTGCTGTTTCTTCGGGCCAGAAAAGAACTGTGGCCAGATCCTCTGGCCCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp CTGCCTGACACTGACCACATGGCGCTGCACAGAAGGTaGCTTCCAGACCCCATCATGCTGAGAGGTGTCTAT +
Preference number: 6 (lower is better)
Translates to: LPDTDHMALHRR*LPDPIMLRGVY
Trigger: ATAGACACCTCTCAGCATGATGGGGTCTGGAAGCAACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CAA 72 bp CTAGGCGAGAAGTCAGGATCACTTACCACTGAGCTGTaGGTGCGAGGGTCCAGGGGATCACTAGTGTCCACT +
Preference number: 6 (lower is better)
Translates to: LGEKSGSLTTEL*VRGSRGSLVST
Trigger: AGTGGACACTAGTGATCCCCTGGACCCTCGCACCAACAGCTCAGTGGTAAGTGATCCTGACTTCTCGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp GAAGCGGAGTCCCAGGTCACGTGTGCCATCAGGACTTaGCTCCAGAGCCATCATCTTGAGACAGTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: EAESQVTCAIRT*LQSHHLETVQV
Trigger: TACCTGCACTGTCTCAAGATGATGGCTCTGGAGCAAAGTCCTGATGGCACACGTGACCTGGGACTCCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp GCATGGCTCTTCTCAGGGCGGCCACAAAAGAAGTTCTCTTCTTCTTaGACTTCCACAGGCCCCACCATCCTCTTGGTCCGGACCACACTT +
Preference number: 6 (lower is better)
Translates to: AWLFSGRPQKKFSSS*TSTGPTILLVRTTL
Trigger: AAGTGTGGTCCGGACCAAGAGGATGGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTTCTTTTGTGGCCGCCCTGAGAAGAGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CAA 90 bp ATGAGTATCGAAGCGGAGTCCCAGGTCACGTGTGCCATCAGGACTTaGCTCCAGAGCCATCATCTTGAGACAGTGCAGGTAAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: MSIEAESQVTCAIRT*LQSHHLETVQVKLG
Trigger: CCCCAGCTTTACCTGCACTGTCTCAAGATGATGGCTCTGGAGCAAAGTCCTGATGGCACACGTGACCTGGGACTCCGCTTCGATACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS TCA 72 bp GTCTGGAACTTTAGAACTAGAGCTGCCAGGTTGCCATaGGTATCGAAGCGGAGTCCCAGGTCACGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: VWNFRTRAARLP*VSKRSPRSRVP
Trigger: TGGCACACGTGACCTGGGACTCCGCTTCGATACTCATGGCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CTTCCCCCAGAGGTGGACACAAACACCAGCTTTGCATaGCTCTTCTCAGGGCGGCCACAAAAGAAGTTCTCT +
Preference number: 6 (lower is better)
Translates to: LPPEVDTNTSFA*LFSGRPQKKFS
Trigger: AGAGAACTTCTTTTGTGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGTCCACCTCTGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CCA 72 bp GGTGGACCGGGCCGTACTCTGTACTGTAGGGTAAGTTaGTCTGGAACTTTAGAACTAGAGCTGCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: GGPGRTLYCRVS*SGTLELELPGC
Trigger: GCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGACCAACTTACCCTACAGTACAGAGTACGGCCCGGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp TGTATCTGCAGGTCTTCAGAGAGTATGGAAGGCCGATaGGAAAGCTTGCTGGTGGCTGTGCTGGTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: CICRSSESMEGR*ESLLVAVLVSK
Trigger: CTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp TGCTGTGGTGAGAATTGGGCATGTTTGGGTCATAGATaGTCTCCTTCAGTGCTAGCCAGAGGGTGTCGCGCT +
Preference number: 6 (lower is better)
Translates to: CCGENWACLGHR*SPSVLARGCRA
Trigger: AGCGCGACACCCTCTGGCTAGCACTGAAGGAGACCATCTATGACCCAAACATGCCCAATTCTCACCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp TTCCTGATCTGCTCCTGTTCTATGCGACACATGGAATaGATGGCTTGCAGGTTCCACAGGCTTCCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: FLICSCSMRHME*MACRFHRLPPE
Trigger: CTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS CAA 72 bp GTGCTTAGACTATGCTGCAAGCTGTACAGCTCCAAGTaGCTGGTGAACCAACCCTGGTTGAGGCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: VLRLCCKLYSSK*LVNQPWLRPGG
Trigger: ACCTCCTGGCCTCAACCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 72 bp AGAGGCAGAGAGAAAGAGAGCTTCGGCAGTGTTGAGTaGCCACTCAAGAAGAACCAGCAAGCCCACCGTGAG +
Preference number: 6 (lower is better)
Translates to: RGREKESFGSVE*PLKKNQQAHRE
Trigger: CTCACGGTGGGCTTGCTGGTTCTTCTTGAGTGGCAACTCAACACTGCCGAAGCTCTCTTTCTCTCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CAA 90 bp ATTCCTGATCTGCTCCTGTTCTATGCGACACATGGAATGGATGGCTaGCAGGTTCCACAGGCTTCCCCCAGAGGTGGACACAAACACCAG +
Preference number: 6 (lower is better)
Translates to: IPDLLLFYATHGMDG*QVPQASPRGGHKHQ
Trigger: CTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCTGCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10
CDS TCA 72 bp AGACCCCATCATGCTGAGAGGTGTCTATGGAGGTGCTaGGGTTGGAGACATGGGCACATAGAGATGCTTGGT +
Preference number: 6 (lower is better)
Translates to: RPHHAERCLWRC*GWRHGHIEMLG
Trigger: ACCAAGCATCTCTATGTGCCCATGTCTCCAACCTCAGCACCTCCATAGACACCTCTCAGCATGATGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS GCA 72 bp ATGGAAATAATCTTGCGAAAAATACGGATCCGTCTGTaGAACGCCAGCAACAGCCTCAGGGGGTCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: MEIILRKIRIRL*NASNSLRGSLP
Trigger: TGGCAGCGACCCCCTGAGGCTGTTGCTGGCGTTGCACAGACGGATCCGTATTTTTCGCAAGATTATTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp AGGCAGATCCTCGAACAGGAACTGCTGGCGATACTCTaGGTCAAAGCGTTCAAAGGGATGGCTAGAACGGAA +
Preference number: 6 (lower is better)
Translates to: RQILEQELLAIL*VKAFKGMARTE
Trigger: TTCCGTTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp AGTTGGTCTGGAACTTTAGAACTAGAGCTGCCAGGTTaGCATGAGTATCGAAGCGGAGTCCCAGGTCACGTG +
Preference number: 6 (lower is better)
Translates to: SWSGTLELELPG*HEYRSGVPGHV
Trigger: CACGTGACCTGGGACTCCGCTTCGATACTCATGGCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGACCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp CCAAGCACGACAGCTGGCTCTGTGCTTAGACTATGCTaGAAGCTGTACAGCTCCAAGTTGCTGGTGAACCAA +
Preference number: 6 (lower is better)
Translates to: PSTTAGSVLRLC*KLYSSKLLVNQ
Trigger: TTGGTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp AGACCAAGCACGACAGCTGGCTCTGTGCTTAGACTATaGTGCAAGCTGTACAGCTCCAAGTTGCTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: RPSTTAGSVLRL*CKLYSSKLLVN
Trigger: GTTCACCAGCAACTTGGAGCTGTACAGCTTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp ATAGCTGACACTACAGGTACACGAACGGAGCCCTCCTaGTCCTGTTCTATGCGACACATGGAATGGATGGCT +
Preference number: 6 (lower is better)
Translates to: IADTTGTRTEPS*SCSMRHMEWMA
Trigger: AGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGGAGGGCTCCGTTCGTGTACCTGTAGTGTCAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110846.8
CDS CCA 72 bp TGCTGGCGATACTCTGCGTCAAAGCGTTCAAAGGGATaGCTAGAACGGAAGAACTGGCCTCCAAGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: CWRYSASKRSKG*LERKNWPPSGN
Trigger: ATTGCCACTTGGAGGCCAGTTCTTCCGTTCTAGCCATCCCTTTGAACGCTTTGACGCAGAGTATCGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS CCA 72 bp CACGGCCCTTCCAGGATAAGCTGCTGTGGTGAGAATTaGGCATGTTTGGGTCATAGATGGTCTCCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: HGPSRISCCGEN*ACLGHRWSPSV
Trigger: CACTGAAGGAGACCATCTATGACCCAAACATGCCCAATTCTCACCACAGCAGCTTATCCTGGAAGGGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp GAAAGAGAAAGCAGATTCTTGGGGCCAGTGAGGGCCTaGATGGCTTTCCAAACTTCTAACCTTCGGCCTATC +
Preference number: 6 (lower is better)
Translates to: ERESRFLGPVRA*MAFQTSNLRPI
Trigger: GATAGGCCGAAGGTTAGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CCA 72 bp GAAGATGAAGGCCAGACACCCCACGATCACAGCCACTaGCCAATCAGCAATCATATGAGAATAGCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: EDEGQTPHDHSH*PISNHMRIALR
Trigger: CCGAAGAGCTATTCTCATATGATTGCTGATTGGCCAGTGGCTGTGATCGTGGGGTGTCTGGCCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037547.9
ENSMUST00000063975.10
ENSMUST00000110843.2
ENSMUST00000110846.8
CDS CCA 72 bp TACCGAAACTTAATGACACCACAGGGCAGCAGGCGCTaGAAAAGCAGGCGCGAGAGGATGGAAATAATCTTG +
Preference number: 6 (lower is better)
Translates to: YRNLMTPQGSRR*KSRRERMEIIL
Trigger: CAAGATTATTTCCATCCTCTCGCGCCTGCTTTTCCAGCGCCTGCTGCCCTGTGGTGTCATTAAGTTTCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037547.9
CDS GCA 72 bp AGGACCTTCAGCATCTGGACAGAAAGATTCCTGATCTaGTCCTGTTCTATGCGACACATGGAATGGATGGCT +
Preference number: 6 (lower is better)
Translates to: RTFSIWTERFLI*SCSMRHMEWMA
Trigger: AGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCAGGAATCTTTCTGTCCAGATGCTGAAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063975.10