RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DISC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043051

Ensembl transcript IDs: ENSMUST00000074562.11, ENSMUST00000075730.11, ENSMUST00000098311.11, ENSMUST00000115885.9, ENSMUST00000117658.8, ENSMUST00000118942.8, ENSMUST00000121953.2, ENSMUST00000122389.8

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACTCTaGGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCC +
Preference number: 1 (lower is better)
Translates to: PPEELAWGTKDLHRL*GLWAPGIGVSVERP
Trigger: GGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR TCA 90 bp CCAGGAGAGAGACTCCCACAAGATTCAACCACACAGCTCCCAGGATaGAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGTTCGCCTAGA +
Preference number: 1 (lower is better)
Translates to: PGERLPQDSTTQLPG*RRLRPRSGERRSPR
Trigger: TCTAGGCGAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCTCTCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR CCA 90 bp ATGTGTGCCATACTGGGTGTAGCTAATGGATCCGTGGATTACAGGTaGACAGGTGATGAGCTAGCATGCTTCCTACAGAGCAGACTCCAC +
Preference number: 1 (lower is better)
Translates to: MCAILGVANGSVDYR*TGDELACFLQSRLH
Trigger: GTGGAGTCTGCTCTGTAGGAAGCATGCTAGCTCATCACCTGTCCACCTGTAATCCACGGATCCATTAGCTACACCCAGTATGGCACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR TCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGACCTGCACAGACTCTaGGGTTTGTGGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGDLHRL*GLWAPG
Trigger: GCCAGGAGCCCACAAACCTCAGAGTCTGTGCAGGTC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR-3UTR TCA 90 bp AAAGGCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCACACAGCTCCCAGGATaGAGGAGGCTGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: KGVCHHAQLQDRHFLPSSTQLPG*RRLRPR
Trigger: TCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGT...GGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR GCA 90 bp TTCCCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTAGCCTGTTAGCCAGCTaGCCCAGGAGAGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: FPLPLLPPCYEAQHVCHTSLLAS*PRRETP
Trigger: GGGAGTCTCTCTCCTGGGGCAGCTGGCTAACAGGCT...AGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR CCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACAAGCCCCCAGAGGAATTaGCCTGGGGAACTAAGGACC +
Preference number: 2 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTSPQRN*PGELRT
Trigger: GGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCT...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR-3UTR TCA 90 bp GCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTGCTCCAAAGCACTTTaGAATCCAGAGACCAACATG +
Preference number: 2 (lower is better)
Translates to: ACATMPSCRTGIFFPLPLCSKAL*NPETNM
Trigger: CATGTTGGTCTCTGGATTTCAAAGTGCTTTGGAGCA...CAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGGGGAACTAAGGACCTaGACAGACTCTGAGGTTTGT +
Preference number: 2 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGGELRT*TDSEVC
Trigger: ACAAACCTCAGAGTCTGTGCAGGTCCTTAGTTCCCC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR-3UTR CCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACAGCCCCCAGAGGAATTaGCCTGGGGAACTAAGGACC +
Preference number: 2 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDSPQRN*PGELRT
Trigger: GGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCT...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR CAA 90 bp TCAATGAGGTTTCGCCTGCCAGAGAGGTTGATGCTCCAAAGCACTTaGAAATCCAGAGACCAACATGGCAGCCTGTTAGCCAGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SMRFRLPERLMLQST*KSRDQHGSLLASCP
Trigger: GGGGCAGCTGGCTAACAGGCTGCCATGTTGGTCTCTGGATTTCAAAGTGCTTTGGAGCATCAACCTCTCTGGCAGGCGAAACCTCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTTGGCCATTTCATGTTTaGTTTCGAATGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLWPFHV*FRMEKE
Trigger: CTCTTTCTCCATTCGAAACCAAACATGAAATGGCCA...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR-3UTR CCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACTGGCCATTTCATGTTTaGTTTCGAATGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNWPFHV*FRMEKE
Trigger: CTCTTTCTCCATTCGAAACCAAACATGAAATGGCCA...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR GCA 72 bp AGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTaGACAGACTCTGAGGTTTGTGGGCTCCTGGCATTG +
Preference number: 3 (lower is better)
Translates to: SPQRNWPGELRT*TDSEVCGLLAL
Trigger: CAATGCCAGGAGCCCACAAACCTCAGAGTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR CCA 72 bp ACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTaGCCTGGGGAACTAAGGACCTGCACAGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: TSPETEQSPQRN*PGELRTCTDSE
Trigger: CTCAGAGTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR GCA 72 bp TCCGTGGATTACAGGTGGACAGGTGATGAGCTAGCATaGTTCCTACAGAGCAGACTCCACACCTGTTCCCGG +
Preference number: 3 (lower is better)
Translates to: SVDYRWTGDELA*FLQSRLHTCSR
Trigger: CCGGGAACAGGTGTGGAGTCTGCTCTGTAGGAAGCATGCTAGCTCATCACCTGTCCACCTGTAATCCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR GCA 72 bp AAATCCAGAGACCAACATGGCAGCCTGTTAGCCAGCTaGCCCAGGAGAGAGACTCCCACAAGATTCAACCAC +
Preference number: 3 (lower is better)
Translates to: KSRDQHGSLLAS*PRRETPTRFNH
Trigger: GTGGTTGAATCTTGTGGGAGTCTCTCTCCTGGGGCAGCTGGCTAACAGGCTGCCATGTTGGTCTCTGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR TCA 72 bp AAGATTCAACCACACAGCTCCCAGGATGAAGGAGGCTaGGACCAAGAAGCGGAGAAAGACGTTCGCCTAGAC +
Preference number: 3 (lower is better)
Translates to: KIQPHSSQDEGG*DQEAEKDVRLD
Trigger: GTCTAGGCGAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR TCA 72 bp AGACTCCCACAAGATTCAACCACACAGCTCCCAGGATaGAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGT +
Preference number: 3 (lower is better)
Translates to: RLPQDSTTQLPG*RRLRPRSGERR
Trigger: ACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR CAA 90 bp TTCCCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTATGCTCCAAAGCACTTaGAAATCCAGAGACCAACAT +
Preference number: 3 (lower is better)
Translates to: FPLPLLPPCYEAQHVCHTMLQST*KSRDQH
Trigger: ATGTTGGTCTCTGGATTTCAAAGTGCTTTGGAGCAT...AGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR CCA 72 bp ATACTGGGTGTAGCTAATGGATCCGTGGATTACAGGTaGACAGGTGATGAGCTAGCATGCTTCCTACAGAGC +
Preference number: 3 (lower is better)
Translates to: ILGVANGSVDYR*TGDELACFLQS
Trigger: GCTCTGTAGGAAGCATGCTAGCTCATCACCTGTCCACCTGTAATCCACGGATCCATTAGCTACACCCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
3UTR-3UTR CAA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACGTGGCCATTTCATGTTaGGTTTCGAATGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDVAISC*VSNGER
Trigger: TCTTTCTCCATTCGAAACCAAACATGAAATGGCCAC...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR-3UTR CAA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGTGGCCATTTCATGTTaGGTTTCGAATGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAVAISC*VSNGER
Trigger: TCTTTCTCCATTCGAAACCAAACATGAAATGGCCAC...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGGTCAGCCGCCGCCTCTaGGGGGCTACTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: ACATMPSCRTGIFFPLPLVSRRL*GATAGG
Trigger: ACCGCCTGCAGTAGCCCCTCAGAGGCGGCGGCTGAC...CAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR TCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGTCAGCCGCCGCCTCTaGGGGGCTACTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTVSRRL*GATAGG
Trigger: ACCGCCTGCAGTAGCCCCTCAGAGGCGGCGGCTGAC...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGTCAGCCGCCGCCTCTaGGGGGCTACTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGVSRRL*GATAGG
Trigger: ACCGCCTGCAGTAGCCCCTCAGAGGCGGCGGCTGAC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGCCTGTCAGCCCTGCTaGGCTCGGGTGTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTACQPC*ARVWHA
Trigger: GGCATGCCACACCCGAGCTCAGCAGGGCTGACAGGC...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTTGCCCCCCGTGGGGCCTGTCTaGGCTAGATGCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATMPSCRTGIFFPLPLLPPVGPV*ARCFSC
Trigger: GCAGCTGAAGCATCTAGCTCAGACAGGCCCCACGGG...GGGCAACAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGGCGGCGTCCTGGAGTaGCAGGTCCTGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTGGVLE*QVLPAP
Trigger: AGGTGCAGGCAGGACCTGGCACTCCAGGACGCCGCC...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGCATAGAGCGCTGGGCTaGGTGCAGGTGGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ACATMPSCRTGIFFPLPLHRALG*VQVALR
Trigger: TCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATG...CAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACTGGGCTGGGTGCAGGTaGCCCTCAGAGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDWAGCR*PSEATA
Trigger: TGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCA...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACATTGTGGGCGGCGTCCTaGAGTGCCAGGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTLWAAS*SARSCL
Trigger: CAGGCAGGACCTGGCACTCCAGGACGCCGCCCACAA...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGCCTTGCTGACCTCCTaGAGCTGGCCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGALLTS*SWPGDI
Trigger: GATGTCCCCAGGCCAGCTGCAGGAGGTCAGCAAGGC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACGCCTTGCTGACCTCCTaGAGCTGGCCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDALLTS*SWPGDI
Trigger: GATGTCCCCAGGCCAGCTGCAGGAGGTCAGCAAGGC...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AAAGGCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCCACCAGTGAGGCTTaGCAGTGGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KGVCHHAQLQDRHFLPSSPTSEA*QWLPGS
Trigger: TGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGG...GGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp CCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTTGCCCCGCGGAGGATGCATCCTaGGAAGAGAAGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: PPCPAAGPAFSSLFPCCPAEDAS*EEKPVS
Trigger: GGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGC...GGGGCAACAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACGCCAGAGCAGCTGTCTaGGCGGCCTCTCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDARAAV*AASPVL
Trigger: TAGCACAGGAGAGGCCGCCCAGACAGCTGCTCTGGC...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCCTGTCAGCCCTGCTaGGCTCGGGTGTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPACQPC*ARVWHA
Trigger: GGCATGCCACACCCGAGCTCAGCAGGGCTGACAGGC...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACAGCTCGGGTGTGGCATaGCCACTGCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDSSGVA*PLLERG
Trigger: TCCTCTCTCCAGCAGTGGGCATGCCACACCCGAGCT...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGCTGATTGCCTGCTGCTaGTCCTTGTCACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ACATMPSCRTGIFFPLPLLIACC*SLSPEP
Trigger: TGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAG...CAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCCCTCCTGGTGATGGATaGAGGCAGGCTATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGPPGDG*RQAILG
Trigger: GCCCAGGATAGCCTGCCTGCATCCATCACCAGGAGG...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACCCTCCTGGTGATGGATaGAGGCAGGCTATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDPPGDG*RQAILG
Trigger: GCCCAGGATAGCCTGCCTGCATCCATCACCAGGAGG...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGTGTGGGCTGCTGCCTaGTTCCTGAAGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTVWAAA*FLKLQA
Trigger: AGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACAC...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGCGTGTGGGCTGCTaGCTGCTTCCTGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGLRVGC*LLPEAA
Trigger: TGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAG...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGCTTCTCATGTAGCCTaGTCTCCGTGTCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGASHVA*SPCQPP
Trigger: CGGCGGCTGACACGGAGACCAGGCTACATGAGAAGC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AAAGGCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCGCTTCTCATGTAGCCTaGTCTCCGTGTCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KGVCHHAQLQDRHFLPSSASHVA*SPCQPP
Trigger: CGGCGGCTGACACGGAGACCAGGCTACATGAGAAGC...GGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTCCCACCAGTGAGGCTTaGCAGTGGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLPTSEA*QWLPGS
Trigger: TGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGG...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTCCCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTTGGGCTGGGTGCAGGTaGCCCTCAGAGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FPLPLLPPCYEAQHVCHTWAGCR*PSEATA
Trigger: TGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCA...AGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp CCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTGGGTTTCTCATAGAGCGCTaGGCTGGGTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPLLPPCYEAQHVCHTGFLIER*AGCRWP
Trigger: GGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAA...CCCAGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTCCTGAGGGTCTCAGGTaGCTCCACCTGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPPEGLR*LHLEGS
Trigger: GCTCCCTTCCAGGTGGAGCCACCTGAGACCCTCAGG...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTCCTGAGGGTCTCAGGTaGCTCCACCTGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLPEGLR*LHLEGS
Trigger: GCTCCCTTCCAGGTGGAGCCACCTGAGACCCTCAGG...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGCCAGAGCAGCTGTCTaGGCGGCCTCTCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLARAAV*AASPVL
Trigger: TAGCACAGGAGAGGCCGCCCAGACAGCTGCTCTGGC...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCAAGAGCAGGTTGCTGTaGAGGCAGAGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGKSRLL*RQSPGQ
Trigger: CTGTCCTGGGCTCTGCCTTCACAGCAACCTGCTCTT...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACATTTCCCGGAGGCTCCTaGGGGTCTCAGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTFPGGS*GSQVAP
Trigger: TGGAGCCACCTGAGACCCTCAGGAGCCTCCGGGAAA...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTTTTCCCGGAGGCTCCTaGGGGTCTCAGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGFPGGS*GSQVAP
Trigger: TGGAGCCACCTGAGACCCTCAGGAGCCTCCGGGAAA...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCTGGTGTCGAGGTCACTaGGTCTCCTCCTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGWCRGH*VSSSES
Trigger: GCTCTCTGAGGAGGAGACTCAGTGACCTCGACACCA...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTGGGGTGTGGCATGCCCACTaGTGGAGAGAGGAACCCGAT +
Preference number: 4 (lower is better)
Translates to: PLPLLPPCYEAQHVCHTGVWHAH*WREEPD
Trigger: ATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCACAC...CCCAGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp GCTTCCTACAGAGCAGACTCCACACCTGTTCCCGGCCAGTCAATGAGGTTTCGCCCCACCAGCGGAGGATaGATCCTGGGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASYRADSTPVPGQSMRFRPTSGG*ILGREA
Trigger: GGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGG...GCGAAACCTCATTGACTGGCCGGGAACAGGTGTGGAGTCTGCTCTGTAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTTGGCATGCCCACTGCTaGAGAGAGGAACCCGATCCC +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLWHAHC*REEPDP
Trigger: GGGATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCA...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTAGTGAGGCTTGGCAGTaGCTCCCAGGGTCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPSEAWQ*LPGSSP
Trigger: CGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACT...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTTTCTCATAGAGCGCTaGGCTGGGTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPFLIER*AGCRWP
Trigger: GGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAA...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACATGGCCTGGGGACATCTaGGCCACCAGTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTWPGDI*ATSAIR
Trigger: CCTGATGGCACTGGTGGCCCAGATGTCCCCAGGCCA...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGCAGCTGCTCAGCTaGCCTTCCAACACTTCCATG +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGLQLLS*PSNTSM
Trigger: CATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAG...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGTGTGGCATGCCCACTaGTGGAGAGAGGAACCCGAT +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLVWHAH*WREEPD
Trigger: ATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCACAC...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACAGCTCGGGTGTGGCATaGCCACTGCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNSSGVA*PLLERG
Trigger: TCCTCTCTCCAGCAGTGGGCATGCCACACCCGAGCT...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCTCCCTTGTTCCAGGGTaGATCAAGGCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGSLVPG*IKARSQ
Trigger: CTGGCTCCTAGCCTTGATGCACCCTGGAACAAGGGA...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGATTGCCTGCTGCTaGTCCTTGTCACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGLIACC*SLSPEP
Trigger: TGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAG...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACACCCACCAGCGGAGGATaGATCCTGGGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTPTSGG*ILGREA
Trigger: GGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGG...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTCCCACCAGCGGAGGATaGATCCTGGGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGPTSGG*ILGREA
Trigger: GGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGG...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTCCCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTAGTGAGGCTTGGCAGTaGCTCCCAGGGTCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: FPLPLLPPCYEAQHVCHTSEAWQ*LPGSSP
Trigger: CGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACT...AGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCACCCACCAGTGAGGCTTaGCAGTGGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAPTSEA*QWLPGS
Trigger: TGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGG...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTTGCCCCGCACCAAGGGAGAGTTaGATGAAGCTGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PPCPAAGPAFSSLFPCCPAPRES*MKLKLE
Trigger: TTCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGC...GGGGCAACAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGCGGAGGATGCATCCTaGGAAGAGAAGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLAEDAS*EEKPVS
Trigger: GGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGC...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACGGAAGGGAGCCTGGTTaGCAGAGGTCAGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNGREPG*QRSGSL
Trigger: GAGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCC...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTGGAAGGGAGCCTGGTTaGCAGAGGTCAGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGGREPG*QRSGSL
Trigger: GAGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCC...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACACCTGGAAGGGAGCCTaGTTGGCAGAGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNTWKGA*LAEVRV
Trigger: GACCCTGACCTCTGCCAACCAGGCTCCCTTCCAGGT...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACTTTTCTTCTTCGGGGTaGGGTGTTCGAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDFSSSG*GVRGTA
Trigger: GGCTGTCCCTCGAACACCCCACCCCGAAGAAGAAAA...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTGCCTCCTTTGTTGGCTaGAGCTGCAGGATCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPASFVG*SCRIMA
Trigger: GGCCATGATCCTGCAGCTCCAGCCAACAAAGGAGGC...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACAGTCTTCAGGCCCCTTaGTCCCTTGTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNSLQAP*SLVPGC
Trigger: GCACCCTGGAACAAGGGATCAAGGGGCCTGAAGACT...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp AGCACTTTGAAATCCAGAGACCAACATGGCAGCCTGTTAGCCAGCTGCCCCAGGAGTCTTCAGGCCCCTTaGTCCCTTGTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: STLKSRDQHGSLLASCPRSLQAP*SLVPGC
Trigger: GCACCCTGGAACAAGGGATCAAGGGGCCTGAAGACT...CCTGGGGCAGCTGGCTAACAGGCTGCCATGTTGGTCTCTGGATTTCAAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR TCA 90 bp GAGACTCCCACAAGATTCAACCACACAGCTCCCAGGATGAAGGAGGCTGAGACCATCTCTTGGGGCCTCTaGTGCAGAGGTTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ETPTRFNHTAPRMKEAETISWGL*CRGSAS
Trigger: AGAGGCCGAACCTCTGCATCAGAGGCCCCAAGAGAT...GGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR TCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGCCCGTGGGGCCTGTCTaGGCTAGATGCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVPVGPV*ARCFSC
Trigger: GCAGCTGAAGCATCTAGCTCAGACAGGCCCCACGGG...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACATCACCTGAGCACACCTaGGCAGTGAGTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTSPEHT*AVSSLT
Trigger: TGTCAGAGAACTCACTGCTCAGGTGTGCTCAGGTGA...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACATGTCGGATAGGAAGCTaGGGCCTCTCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTCRIGS*GLSCLL
Trigger: AAGGAGGCAGGAGAGGCCTCAGCTTCCTATCCGACA...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACGTGTGGCATGCCCACTaGTGGAGAGAGGAACCCGAT +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNVWHAH*WREEPD
Trigger: ATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCACAC...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACATGTGAGTGTTGGGACTaGTGGCCTGTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTCECWD*WPVSPA
Trigger: AGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACA...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp AGCACTTTGAAATCCAGAGACCAACATGGCAGCCTGTTAGCCAGCTGCCCCAGGTGTGAGTGTTGGGACTaGTGGCCTGTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: STLKSRDQHGSLLASCPRCECWD*WPVSPA
Trigger: AGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACA...CCTGGGGCAGCTGGCTAACAGGCTGCCATGTTGGTCTCTGGATTTCAAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGCTAGATGCTTCAGCTaGCATCTCTTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLARCFS*HLLGPL
Trigger: CAGAGGCCCCAAGAGATGGCAGCTGAAGCATCTAGC...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTTGTGCCACATTCTGATTaGCTGCTGCTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VCHHAQLQDRHFLPSSPVVPHSD*LLLLLV
Trigger: GACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCAC...AACAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTCTGCGAAGAGCAGGTTaGTGTGAAGGCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGLRRAG*CEGRAQ
Trigger: CTGGGCTCTGCCTTCACAGCAACCTGCTCTTCGCAG...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCCAGCGCAGACATCCGTaGTTGGAGAGCTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGQRRHP*LESFDF
Trigger: GAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTG...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACATGCAGGATCATGGCCTaGAGTGTTTCCTTCACCGTC +
Preference number: 4 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTCRIMA*SVSFTV
Trigger: GACGGTGAAGGAAACACTGCAGGCCATGATCCTGCA...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGCTTCTCATGTAGCCTaGTCTCCGTGTCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAASHVA*SPCQPP
Trigger: CGGCGGCTGACACGGAGACCAGGCTACATGAGAAGC...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACTGGCATGCCCACTGCTaGAGAGAGGAACCCGATCCC +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDWHAHC*REEPDP
Trigger: GGGATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCA...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CCAACATGGCAGCCTGTTAGCCAGCTGCCCCAGGAGAGAGACTCCCACAAGATTTTGGACTGTGAGTGTTaGGACTGCTGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PTWQPVSQLPQERDSHKILDCEC*DCWPVS
Trigger: GCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAA...AATCTTGTGGGAGTCTCTCTCCTGGGGCAGCTGGCTAACAGGCTGCCATGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTCGCACTGTCCAGCCTTaGACTGTGAGTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPRTVQP*TVSVGT
Trigger: AGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCG...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACAGTGAGGCTTGGCAGTaGCTCCCAGGGTCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDSEAWQ*LPGSSP
Trigger: CGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACT...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCATGGGCTGGGTGCAGGTaGCCCTCAGAGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISWAGCR*PSEATA
Trigger: TGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCA...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACCAGCTGTCCTTCAAGTaGGGCTTCTGGATCATCGCT +
Preference number: 4 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDQLSFK*GFWIIA
Trigger: AGCGATGATCCAGAAGCCCCACTTGAAGGACAGCTG...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCAGAATCCTCTTTCCATaGGCCTGCAGCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGRILFP*ACSTVW
Trigger: CCACACTGTGCTGCAGGCCCATGGAAAGAGGATTCT...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAATCTCTTGGGGCCTCTaGTGCAGAGGTTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAISWGL*CRGSAS
Trigger: AGAGGCCGAACCTCTGCATCAGAGGCCCCAAGAGAT...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACCTGCAGCTGCTCAGCTaGCCTTCCAACACTTCCATG +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNLQLLS*PSNTSM
Trigger: CATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAG...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCACTGCTGCCTGCTTCCTaGAGCTGCAGGCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPLLPAS*SCRLCI
Trigger: AATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAG...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACTGTCGGATAGGAAGCTaGGGCCTCTCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDCRIGS*GLSCLL
Trigger: AAGGAGGCAGGAGAGGCCTCAGCTTCCTATCCGACA...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TTCCCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTTCCCTTGTTCCAGGGTaGATCAAGGCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLPLLPPCYEAQHVCHTSLVPG*IKARSQ
Trigger: CTGGCTCCTAGCCTTGATGCACCCTGGAACAAGGGA...AGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp CACACAGCTCCCAGGATGAAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGTTCGCTAGATGCTTCAGCTaGCATCTCTTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HTAPRMKEAETKKRRKTFARCFS*HLLGPL
Trigger: CAGAGGCCCCAAGAGATGGCAGCTGAAGCATCTAGC...GAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp AAAGGCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCACATTCTGATTGCCTaGTGCTGCTCCTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: KGVCHHAQLQDRHFLPSSHILIA*CCSLSP
Trigger: AGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTG...GGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTGTGCCACATTCTGATTaGCTGCTGCTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPVPHSD*LLLLLV
Trigger: GACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCAC...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACCTGCGAAGAGCAGGTTaGTGTGAAGGCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDLRRAG*CEGRAQ
Trigger: CTGGGCTCTGCCTTCACAGCAACCTGCTCTTCGCAG...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTGGCCACCTGTATCTGTaGTGCCAGGTAACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPGHLYL*CQVTQE
Trigger: TTCTTGGGTTACCTGGCAGCACAGATACAGGTGGCC...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACTTGGACTGTGAGTGTTaGGACTGCTGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNLDCEC*DCWPVS
Trigger: GCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAA...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GAGACTCCCACAAGATTCAACCACACAGCTCCCAGGATGAAGGAGGCTGAGACCCGCACTGTCCAGCCTTaGACTGTGAGTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: ETPTRFNHTAPRMKEAETRTVQP*TVSVGT
Trigger: AGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCG...GGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCACATAGAGCGCTGGGCTaGGTGCAGGTGGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISHRALG*VQVALR
Trigger: TCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATG...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCCATAGAGCGCTGGGCTaGGTGCAGGTGGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISHRALG*VQVALR
Trigger: TCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATG...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACGCGGAGGATGCATCCTaGGAAGAGAAGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDAEDAS*EEKPVS
Trigger: GGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGC...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGATCTCTTGGGGCCTCTaGTGCAGAGGTTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVISWGL*CRGSAS
Trigger: AGAGGCCGAACCTCTGCATCAGAGGCCCCAAGAGAT...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACAAGCCTGGAGCAGCGTaGAGACTGAAGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDKPGAA*RLKVQR
Trigger: TCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTT...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp CTCTGTAAACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTTCCAAAGCCTGGAGCAGCGTaGAGACTGAAGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCKPGWPQTQKSTCLCLPKPGAA*RLKVQR
Trigger: TCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTT...TGGAAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTTTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR TCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCATGCTGTTCCTGGAGCTaGGTGCCAACAGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISCCSWS*VPTACP
Trigger: TGGGCAGGCTGTTGGCACTCAGCTCCAGGAACAGCA...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGTGTGAGTGTTGGGACTaGTGGCCTGTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVCECWD*WPVSPA
Trigger: AGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACA...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCACTGATTGCCTGCTGCTaGTCCTTGTCACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPLIACC*SLSPEP
Trigger: TGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAG...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTCACATTCTGATTGCCTaGTGCTGCTCCTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPHILIA*CCSLSP
Trigger: AGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTG...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTGGCCACCTGTATCTGTaGTGCCAGGTAACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGGHLYL*CQVTQE
Trigger: TTCTTGGGTTACCTGGCAGCACAGATACAGGTGGCC...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACACAGTGTTTGCCTTCATaGGTGTTTTGTGGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTQCLPS*VFCGRR
Trigger: ACGCCGCCCACAAAACACGCATGAAGGCAAACACTG...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCGTGTGGGCTGCTGCCTaGTTCCTGAAGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISVWAAA*FLKLQA
Trigger: AGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACAC...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCTTTCTCATAGAGCGCTaGGCTGGGTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISFLIER*AGCRWP
Trigger: GGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAA...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCATTCGGCCTCTCTGGATaGCAGGCAACCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAFGLSG*QATFCF
Trigger: GAAGCAGAAGGTTGCCTGCCATCCAGAGAGGCCGAA...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CACTCTGTAAACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTTCTTCGGCCTCTCTGGATaGCAGGCAACCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HSVNQAGLKLRNPPASAFFGLSG*QATFCF
Trigger: GAAGCAGAAGGTTGCCTGCCATCCAGAGAGGCCGAA...GAAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTTTACAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CCA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACACAGCTGTCCTTCAAGTaGGGCTTCTGGATCATCGCT +
Preference number: 4 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTQLSFK*GFWIIA
Trigger: AGCGATGATCCAGAAGCCCCACTTGAAGGACAGCTG...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCACCTGGAAGGGAGCCTaGTTGGCAGAGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISTWKGA*LAEVRV
Trigger: GACCCTGACCTCTGCCAACCAGGCTCCCTTCCAGGT...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAATAGGGCCAGCATCTTaGCTTCCAGCAAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAIGPAS*LPARQA
Trigger: TGCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTAT...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCTCCTTTGTTGGCTaGAGCTGCAGGATCATGGCC +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVASFVG*SCRIMA
Trigger: GGCCATGATCCTGCAGCTCCAGCCAACAAAGGAGGC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAAGTCTTCAGGCCCCTTaGTCCCTTGTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISSLQAP*SLVPGC
Trigger: GCACCCTGGAACAAGGGATCAAGGGGCCTGAAGACT...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCAAGAGCAGGTTGCTGTaGAGGCAGAGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISKSRLL*RQSPGQ
Trigger: CTGTCCTGGGCTCTGCCTTCACAGCAACCTGCTCTT...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGACAGCCAGGTTCAGTaGTTTTGTCCTTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPDSQVQ*FCPFPE
Trigger: CTCCGGGAAAGGACAAAATCACTGAACCTGGCTGTC...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCACTGCTGCCTGCTTCCTaGAGCTGCAGGCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISLLPAS*SCRLCI
Trigger: AATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAG...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCTAGATGCTTCAGCTaGCATCTCTTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVARCFS*HLLGPL
Trigger: CAGAGGCCCCAAGAGATGGCAGCTGAAGCATCTAGC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCACAGCGCAGACATCCGTaGTTGGAGAGCTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAQRRHP*LESFDF
Trigger: GAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTG...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCATGCAGGATCATGGCCTaGAGTGTTTCCTTCACCGTC +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPCRIMA*SVSFTV
Trigger: GACGGTGAAGGAAACACTGCAGGCCATGATCCTGCA...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCATTTGTTGGCTGGAGCTaGAGGATCATGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPFVGWS*RIMACS
Trigger: ACTGCAGGCCATGATCCTGCAGCTCCAGCCAACAAA...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGTTGGACTGTGAGTGTTaGGACTGCTGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVLDCEC*DCWPVS
Trigger: GCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAA...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTGCACCAAGGGAGAGTTaGATGAAGCTGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGAPRES*MKLKLE
Trigger: TTCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGC...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGTTCGGCCTCTCTGGATaGCAGGCAACCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVFGLSG*QATFCF
Trigger: GAAGCAGAAGGTTGCCTGCCATCCAGAGAGGCCGAA...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACGCAGACATCCGTGCTTaGAGAGCTTCGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNADIRA*RASISF
Trigger: GAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGC...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGCTCCTCCAACTCTTaGCTCAGCCGTTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPCSSNS*LSRFSF
Trigger: AAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCA...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAAGAATCCTCTTTCCATaGGCCTGCAGCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPRILFP*ACSTVW
Trigger: CCACACTGTGCTGCAGGCCCATGGAAAGAGGATTCT...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAGTTTCCTTCACCGTCTaGAGCTCCCCCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISVSFTV*SSPWRD
Trigger: GTCTCTCCAGGGGGAGCTCCAGACGGTGAAGGAAAC...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCGTTTCCTTCACCGTCTaGAGCTCCCCCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISVSFTV*SSPWRD
Trigger: GTCTCTCCAGGGGGAGCTCCAGACGGTGAAGGAAAC...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCAAGCCTGGAGCAGCGTaGAGACTGAAGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISKPGAA*RLKVQR
Trigger: TCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTT...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCATCCCTTGTTCCAGGGTaGATCAAGGCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISSLVPG*IKARSQ
Trigger: CTGGCTCCTAGCCTTGATGCACCCTGGAACAAGGGA...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGGTAACCCAAGAAGCTaGGAAGAGCAGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVGNPRS*EEQVAV
Trigger: CACAGCAACCTGCTCTTCGCAGCTTCTTGGGTTACC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGCACTTCACAGTGTTTaGCTTCATGCGTGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: AAVAAALAVVVVSCSHYLALHSV*LHACFV
Trigger: CACAAAACACGCATGAAGGCAAACACTGTGAAGTGC...AAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCCGCACTGTCCAGCCTTaGACTGTGAGTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISRTVQP*TVSVGT
Trigger: AGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCG...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGCACCAAGGGAGAGTTaGATGAAGCTGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAAPRES*MKLKLE
Trigger: TTCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGC...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCATAGGGCCAGCATCTTaGCTTCCAGCAAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISIGPAS*LPARQA
Trigger: TGCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTAT...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCTTTTCTTCTTCGGGGTaGGGTGTTCGAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISFSSSG*GVRGTA
Trigger: GGCTGTCCCTCGAACACCCCACCCCGAAGAAGAAAA...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGAGCTTCACGCCTATaGCTTCGCACTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAGASRL*LRTFLQ
Trigger: TTGGAGAAAAGTGCGAAGCCATAGGCGTGAAGCTCC...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGGAGCTGCAGGATCATaGCCTGCAGTGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVGAAGS*PAVFPS
Trigger: TGAAGGAAACACTGCAGGCCATGATCCTGCAGCTCC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp CCTCTTCCCCTGTTGCCCCCATGCTACGAGGCACAACATGTGTGCCATACTGGGGTCTACGAACAGCTTTaGACTCACCAGTATCGTAAT +
Preference number: 4 (lower is better)
Translates to: PLPLLPPCYEAQHVCHTGVYEQL*THQYRN
Trigger: ATTACGATACTGGTGAGTCCAAAGCTGTTCGTAGAC...CCCAGTATGGCACACATGTTGTGCCTCGTAGCATGGGGGCAACAGGGGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR TCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCGACAGCCAGGTTCAGTaGTTTTGTCCTTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISDSQVQ*FCPFPE
Trigger: CTCCGGGAAAGGACAAAATCACTGAACCTGGCTGTC...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCATCACCTGAGCACACCTaGGCAGTGAGTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISSPEHT*AVSSLT
Trigger: TGTCAGAGAACTCACTGCTCAGGTGTGCTCAGGTGA...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCATCAGCAGAAACGATGTaGGAATCCTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPASAETM*ESSFHG
Trigger: CCCATGGAAAGAGGATTCTCACATCGTTTCTGCTGA...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR TCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACTCAGCAGAAACGATGTaGGAATCCTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDSAETM*ESSFHG
Trigger: CCCATGGAAAGAGGATTCTCACATCGTTTCTGCTGA...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCGAAGATAATAATTCTTaGCAAAACCCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGEDNNS*QNPLSP
Trigger: TGGGGACAGTGGGTTTTGGCAAGAATTATTATCTTC...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCGTGCCACATTCTGATTaGCTGCTGCTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISVPHSD*LLLLLV
Trigger: GACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCAC...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAGGTAACCCAAGAAGCTaGGAAGAGCAGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISGNPRS*EEQVAV
Trigger: CACAGCAACCTGCTCTTCGCAGCTTCTTGGGTTACC...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCACTTTGGGTGGCTCCATaGAAGGCCACCTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISLWVAP*KATCIC
Trigger: ACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAG...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAACAAGTCTCCAAGTCTaGTTTCCACACTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPATSLQV*FPHSPK
Trigger: CTTGGGAGAGTGTGGAAAGCAGACTTGGAGACTTGT...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCATTTGTTGGCTGGAGCTaGAGGATCATGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISFVGWS*RIMACS
Trigger: ACTGCAGGCCATGATCCTGCAGCTCCAGCCAACAAA...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCAGACATCCGTGCTTaGAGAGCTTCGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVADIRA*RASISF
Trigger: GAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACTGCTCCTCCAACTCTTaGCTCAGCCGTTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDCSSNS*LSRFSF
Trigger: AAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCA...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCGGAGCTGCAGGATCATaGCCTGCAGTGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISGAAGS*PAVFPS
Trigger: TGAAGGAAACACTGCAGGCCATGATCCTGCAGCTCC...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
3UTR CAA 72 bp TTTCGCCTGCCAGAGAGGTTGATGCTCCAAAGCACTTaGAAATCCAGAGACCAACATGGCAGCCTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: FRLPERLMLQST*KSRDQHGSLLA
Trigger: GGCTAACAGGCTGCCATGTTGGTCTCTGGATTTCAAAGTGCTTTGGAGCATCAACCTCTCTGGCAGGCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp CACACAGCTCCCAGGATGAAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGTTCGCCTCTCAGATTGTCTaGTGTCATTCTTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: HTAPRMKEAETKKRRKTFASQIV*CHSWNE
Trigger: TTCATTCCAAGAATGACAGCAGACAATCTGAGAGGC...GAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCCACATTCTGATTGCCTaGTGCTGCTCCTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISHILIA*CCSLSP
Trigger: AGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTG...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAGGAGCTTCACGCCTATaGCTTCGCACTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISGASRL*LRTFLQ
Trigger: TTGGAGAAAAGTGCGAAGCCATAGGCGTGAAGCTCC...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCACAAGTCTCCAAGTCTaGTTTCCACACTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISTSLQV*FPHSPK
Trigger: CTTGGGAGAGTGTGGAAAGCAGACTTGGAGACTTGT...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp CACTCTGTAAACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTTCGAAGATAATAATTCTTaGCAAAACCCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSVNQAGLKLRNPPASAFEDNNS*QNPLSP
Trigger: TGGGGACAGTGGGTTTTGGCAAGAATTATTATCTTC...GAAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTTTACAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR GCA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAGCCTCTCAGATTGTCTaGTGTCATTCTTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISASQIV*CHSWNE
Trigger: TTCATTCCAAGAATGACAGCAGACAATCTGAGAGGC...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR GCA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGAAGATAATAATTCTTaGCAAAACCCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVEDNNS*QNPLSP
Trigger: TGGGGACAGTGGGTTTTGGCAAGAATTATTATCTTC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS GCA 90 bp ATCGGCCCAGCCGCCGCCCTGGTCGCCCCGCCCACCAGCGGAGGATaGATCCTGGGAAGAGAAGCCAGTGTCCGAGGAGGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: IGPAAALVAPPTSGG*ILGREASVRGGGGD
Trigger: GTCTCCTCCTCCTCCTCGGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGGCGGGGCGACCAGGGCGGCGGCTGGGCCGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp CAGCCGCCGCCCTGGTCGCCCCGCCCACCAGCGGAGGATGCATCCTaGGAAGAGAAGCCAGTGTCCGAGGAGGAGGAGGAGACCGTGCCA +
Preference number: 5 (lower is better)
Translates to: QPPPWSPRPPAEDAS*EEKPVSEEEEETVP
Trigger: TGGCACGGTCTCCTCCTCCTCCTCGGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGGCGGGGCGACCAGGGCGGCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp TCTCCCAAGGCCTTGCTGACCTCCTGCAGCTGGCCTGGGGACATCTaGGCCACCAGTGCCATCAGGTCACAGCCCGGCCACCGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPKALLTSCSWPGDI*ATSAIRSQPGHRSS
Trigger: GCTGCTCCGGTGGCCGGGCTGTGACCTGATGGCACTGGTGGCCCAGATGTCCCCAGGCCAGCTGCAGGAGGTCAGCAAGGCCTTGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp GTTGGGACTGCTGGCCTGTCAGCCCTGCTGAGCTCGGGTGTGGCATaGCCACTGCTGGAGAGAGGAACCCGATCCCAGAACCCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VGTAGLSALLSSGVA*PLLERGTRSQNPLC
Trigger: GCACAGCGGGTTCTGGGATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCACACCCGAGCTCAGCAGGGCTGACAGGCCAGCAGTCCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp AGAGAGGAACCCGATCCCAGAACCCGCTGTGCTTCTCATGTAGCCTaGTCTCCGTGTCAGCCGCCGCCTCTGAGGGGCTACTGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: REEPDPRTRCASHVA*SPCQPPPLRGYCRR
Trigger: CCGCCTGCAGTAGCCCCTCAGAGGCGGCGGCTGACACGGAGACCAGGCTACATGAGAAGCACAGCGGGTTCTGGGATCGGGTTCCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp TCTTCTTCGGGGTGGGGTGTTCGAGGGACAGCCAGAGCAGCTGTCTaGGCGGCCTCTCCTGTGCTATGCACCTGCTCCTCGTCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: SSSGWGVRGTARAAV*AASPVLCTCSSSSA
Trigger: CGCAGAGGACGAGGAGCAGGTGCATAGCACAGGAGAGGCCGCCCAGACAGCTGCTCTGGCTGTCCCTCGAACACCCCACCCCGAAGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 90 bp GGTGCAGGTGGCCCTCAGAGGCCACAGCAGGGACAAGGGAGCTCTTaGGAAAAGGCTTGCCCACCAGTGAGGCTTGGCAGTGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GAGGPQRPQQGQGSS*EKACPPVRLGSGSQ
Trigger: CTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCCTGCTGTGGCCTCTGAGGGCCACCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 90 bp GCATGCCCACTGCTGGAGAGAGGAACCCGATCCCAGAACCCGCTGTaGTTCTCATGTAGCCTGGTCTCCGTGTCAGCCGCCGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ACPLLERGTRSQNPL*FSCSLVSVSAAASE
Trigger: CTCAGAGGCGGCGGCTGACACGGAGACCAGGCTACATGAGAAGCACAGCGGGTTCTGGGATCGGGTTCCTCTCTCCAGCAGTGGGCATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 90 bp TGTCTGGGCGGCCTCTCCTGTGCTATGCACCTGCTCCTCGTCCTCTaGGTGTGGGCTGCTGCCTGCTTCCTGAAGCTGCAGGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: CLGGLSCAMHLLLVL*VWAAACFLKLQALH
Trigger: ATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAGAGGACGAGGAGCAGGTGCATAGCACAGGAGAGGCCGCCCAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp AGGCTTGGCAGTGGCTCCCAGGGTCAAGTCCGCACTGTCCAGCCTTaGACTGTGAGTGTTGGGACTGCTGGCCTGTCAGCCCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RLGSGSQGQVRTVQP*TVSVGTAGLSALLS
Trigger: GCTCAGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGGACTTGACCCTGGGAGCCACTGCCAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 90 bp TTGTCACCTGAGCCAAGTCCGCCAAGCCTGGAGCAGCGTGAAGACTaGAGGTCCAGAGATGCCGAGGATCCCCGTGGGGCCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LSPEPSPPSLEQRED*RSRDAEDPRGACLS
Trigger: GCTCAGACAGGCCCCACGGGGATCCTCGGCATCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTTGGCGGACTTGGCTCAGGTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 90 bp TGCGGTTGCTCAGTAGGTAGTCCTGCAGCATGGGCTCCCATTCCCTaGGCAATGTATGCCATCCATGGGCATCGGCCCAGCCGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: CGCSVGSPAAWAPIP*AMYAIHGHRPSRRP
Trigger: AGGGCGGCGGCTGGGCCGATGCCCATGGATGGCATACATTGCTCAGGGAATGGGAGCCCATGCTGCAGGACTACCTACTGAGCAACCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 90 bp TTGTGGGCGGCGTCCTGGAGTGCCAGGTCCTGCCTGCACCTGAGGTaGTCCTCTTTGACGATGCCCAGCCTTCTGCTGTTCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LWAASWSARSCLHLR*SSLTMPSLLLFLEL
Trigger: CAGCTCCAGGAACAGCAGAAGGCTGGGCATCGTCAAAGAGGATCACCTCAGGTGCAGGCAGGACCTGGCACTCCAGGACGCCGCCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp ACCAGTGCCATCAGGTCACAGCCCGGCCACCGGAGCAGCACCTCCTaGTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTTGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSAIRSQPGHRSSTS*SSNSWLSRFSFASS
Trigger: GCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTGCTCCGGTGGCCGGGCTGTGACCTGATGGCACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp TCAAGTCCGCACTGTCCAGCCTTGGACTGTGAGTGTTGGGACTGCTaGCCTGTCAGCCCTGCTGAGCTCGGGTGTGGCATGCCCACTGCT +
Preference number: 5 (lower is better)
Translates to: SSPHCPALDCECWDC*PVSPAELGCGMPTA
Trigger: AGCAGTGGGCATGCCACACCCGAGCTCAGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGGACTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 90 bp CACAGCAGGGACAAGGGAGCTCTTGAGAAAAGGCTTGCCCACCAGTaGGGCTTGGCAGTGGCTCCCAGGGTCAAGTCCGCACTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: HSRDKGALEKRLAHQ*GLAVAPRVKSALSS
Trigger: GCTGGACAGTGCGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp GGGACAAGGGAGCTCTTGAGAAAAGGCTTGCCCACCAGTGAGGCTTaGCAGTGGCTCCCAGGGTCAAGTCCGCACTGTCCAGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GTRELLRKGLPTSEA*QWLPGSSPHCPALD
Trigger: GTCCAAGGCTGGACAGTGCGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp CTGAGGCCTCTCCTGCCTCCTTTGTTGGCTGGAGCTGCAGGATCATaGCCTGCAGTGTTTCCTTCACCGTCTGGAGCTCCCCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LRPLLPPLLAGAAGS*PAVFPSPSGAPPGE
Trigger: CTCTCCAGGGGGAGCTCCAGACGGTGAAGGAAACACTGCAGGCCATGATCCTGCAGCTCCAGCCAACAAAGGAGGCAGGAGAGGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS-3UTR CAA 90 bp CCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCCCTGTTGCCCCGGAAGTGAAGGTGTCTaGGAAGCCGGGAAGGGATGC +
Preference number: 5 (lower is better)
Translates to: PPCPAAGPAFSSLFPCCPGSEGV*EAGKGC
Trigger: GCATCCCTTCCCGGCTTCCAAGACACCTTCACTTCC...GGGGCAACAGGGGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS GCA 90 bp CATGCAAGGCCACCTGTATCTGTGCTGCCAGGTAACCCAAGAAGCTaGGAAGAGCAGGTTGCTGTGAAGGCAGAGCCCAGGACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: HARPPVSVLPGNPRS*EEQVAVKAEPRTGG
Trigger: GCCGCCTGTCCTGGGCTCTGCCTTCACAGCAACCTGCTCTTCGCAGCTTCTTGGGTTACCTGGCAGCACAGATACAGGTGGCCTTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp CCTCTCCTGTGCTATGCACCTGCTCCTCGTCCTCTGCGTGTGGGCTaGTGCCTGCTTCCTGAAGCTGCAGGCTCTGCATTAGCAACTGAC +
Preference number: 5 (lower is better)
Translates to: PLLCYAPAPRPLRVG*CLLPEAAGSALATD
Trigger: GTCAGTTGCTAATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAGAGGACGAGGAGCAGGTGCATAGCACAGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp GTCCTTCAAGTGGGGCTTCTGGATCATCGCTGCCGGCCCTTTGGGTaGCTCCATGCAAGGCCACCTGTATCTGTGCTGCCAGGTAACCCA +
Preference number: 5 (lower is better)
Translates to: VLQVGLLDHRCRPFG*LHARPPVSVLPGNP
Trigger: TGGGTTACCTGGCAGCACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS-3UTR CAA 90 bp ACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGACGATAGGGCCAGCATCTaGGCTTCCAGCAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: TEQSPQRNWPGELRTCTDDRASI*ASSKAG
Trigger: GCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTATC...GTCTGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS GCA 90 bp CATCCTGGGAAGAGAAGCCAGTGTCCGAGGAGGAGGAGGAGACCGTaGCACATTCTGATTGCCTGCTGCTGCTCCTTGTCACCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: HPGKRSQCPRRRRRP*HILIACCCSLSPEP
Trigger: TGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCACGGTCTCCTCCTCCTCCTCGGACACTGGCTTCTCTTCCCAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 90 bp CTCCTGTGCTATGCACCTGCTCCTCGTCCTCTGCGTGTGGGCTGCTaGCTGCTTCCTGAAGCTGCAGGCTCTGCATTAGCAACTGACAAG +
Preference number: 5 (lower is better)
Translates to: LLCYAPAPRPLRVGC*LLPEAAGSALATDK
Trigger: CTTGTCAGTTGCTAATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAGAGGACGAGGAGCAGGTGCATAGCACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp ATGAACCGCAAAGTGCACTGGTCTTTTTCTCATAGAGCGCTGGGCTaGGTGCAGGTGGCCCTCAGAGGCCACAGCAGGGACAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: MNRKVHWSFSHRALG*VQVALRGHSRDKGA
Trigger: AGCTCCCTTGTCCCTGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTTTGCGGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAGGAAGTGAAGGTGTCTaGGAAGCCGGGAAGGGATGC +
Preference number: 5 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTGSEGV*EAGKGC
Trigger: GCATCCCTTCCCGGCTTCCAAGACACCTTCACTTCC...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp AGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACGCCTGCTGCTGCTCCTaGTCACCTGAGCCAAGTCCG +
Preference number: 5 (lower is better)
Translates to: SSSGIGSGGCELQPLPWNACCCS*SPEPSP
Trigger: CGGACTTGGCTCAGGTGACAAGGAGCAGCAGCAGGC...GTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp GAGACTCCCACAAGATTCAACCACACAGCTCCCAGGATGAAGGAGGCTGAGACCGCCTGCTGCTGCTCCTaGTCACCTGAGCCAAGTCCG +
Preference number: 5 (lower is better)
Translates to: ETPTRFNHTAPRMKEAETACCCS*SPEPSP
Trigger: CGGACTTGGCTCAGGTGACAAGGAGCAGCAGCAGGC...GGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCGCTGCCGGCCCTTaGGGTGGCTCCATGCAAGGC +
Preference number: 5 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDIAAGP*GGSMQG
Trigger: GCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGAT...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp GAGGCACCCTGTAGACATCTCCTGAGACTGAGCAGAGCCCCCAGAGGAATTGGCTCCTCCGTGAGCTCCTaGGCTGTGGAGAAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: EAPCRHLLRLSRAPRGIGSSVSS*AVEKQL
Trigger: AAGCTGCTTCTCCACAGCCAAGGAGCTCACGGAGGA...GCCAATTCCTCTGGGGGCTCTGCTCAGTCTCAGGAGATGTCTACAGGGTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CACACAGCTCCCAGGATGAAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGTTCCCGCACTGTCCAGCCTaGGACTGTGAGTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: HTAPRMKEAETKKRRKTFPHCPA*DCECWD
Trigger: GTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGG...GAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp AGCAGCAGTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTAGGCCCCTTGATCCCTaGTTCCAGGGTGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSGIGSGGCELQPLPRPLDP*FQGASR
Trigger: CCTTGATGCACCCTGGAACAAGGGATCAAGGGGCCT...AGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTACTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGATCGCTGCCGGCCCTTaGGGTGGCTCCATGCAAGGC +
Preference number: 5 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVIAAGP*GGSMQG
Trigger: GCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGAT...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACAGATAGGGCCAGCATCTaGGCTTCCAGCAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTDRASI*ASSKAG
Trigger: GCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTATC...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS CCA 90 bp AAGTGCACTGGTCTTTTTCTCATAGAGCGCTGGGCTGGGTGCAGGTaGCCCTCAGAGGCCACAGCAGGGACAAGGGAGCTCTTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KCTGLFLIERWAGCR*PSEATAGTRELLRK
Trigger: TTTTCTCAAGAGCTCCCTTGTCCCTGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 90 bp GCTCCCCCTGGAGAGACTGAAAGAGAGCCTCATCGTGACTGTACATaGCTCCGAGAAGCTGGTCTTCCAGGTGTAGGAGCTTCACGCCTA +
Preference number: 5 (lower is better)
Translates to: APPGETEREPHRDCT*LREAGLPGVGASRL
Trigger: TAGGCGTGAAGCTCCTACACCTGGAAGACCAGCTTCTCGGAGCCATGTACAGTCACGATGAGGCTCTCTTTCAGTCTCTCCAGGGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS-3UTR CAA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACCCGCACTGTCCAGCCTaGGACTGTGAGTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDPHCPA*DCECWD
Trigger: GTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGG...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCACCGCACTGTCCAGCCTaGGACTGTGAGTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAPHCPA*DCECWD
Trigger: GTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGG...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CACACAGCTCCCAGGATGAAGGAGGCTGAGACCAAGAAGCGGAGAAAGACGTTCAGGCCCCTTGATCCCTaGTTCCAGGGTGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: HTAPRMKEAETKKRRKTFRPLDP*FQGASR
Trigger: CCTTGATGCACCCTGGAACAAGGGATCAAGGGGCCT...GAACGTCTTTCTCCGCTTCTTGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp GAGACTGAGCAGAGCCCCCAGAGGAATTGGCCTGGGGAACTAAGGACCTGCACAAGCACCAAGGGAGAGTaGGATGAAGCTGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ETEQSPQRNWPGELRTCTSTKGE*DEAEAG
Trigger: TCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGCT...TGTGCAGGTCCTTAGTTCCCCAGGCCAATTCCTCTGGGGGCTCTGCTCAGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCATGGAAGGGAGCCTGGTaGGCAGAGGTCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPWKGAW*AEVRVS
Trigger: AGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCCA...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCATGGAAGGGAGCCTGGTaGGCAGAGGTCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPAWKGAW*AEVRVS
Trigger: AGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCCA...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS TCA 90 bp GCTTTCCACACTCTCCCAAGCAGCGGGCACCTGCAGCTGCTCAGCTaGCCTTCCAACACTTCCATGCACTTCACAGTGTTTGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: AFHTLPSSGHLQLLS*PSNTSMHFTVFAFM
Trigger: CATGAAGGCAAACACTGTGAAGTGCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGTGTGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp CAGCACCTCCTGCTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTTaGCTCCAGCGCAGACATCCGTGCTTGGAGAGCTTCGATTTCCTT +
Preference number: 5 (lower is better)
Translates to: QHLLLLQLLAQPFFL*LQRRHPCLESFDFL
Trigger: AAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp CCAAGTCTGCTTTCCACACTCTCCCAAGCAGCGGGCACCTGCAGCTaGTCAGCTGACCTTCCAACACTTCCATGCACTTCACAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PSLLSTLSQAAGTCS*SADLPTLPCTSQCL
Trigger: CAAACACTGTGAAGTGCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGTGTGGAAAGCAGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 90 bp AAGTCTCCAAGTCTGCTTTCCACACTCTCCCAAGCAGCGGGCACCTaGAGCTGCTCAGCTGACCTTCCAACACTTCCATGCACTTCACAG +
Preference number: 5 (lower is better)
Translates to: KSPSLLSTLSQAAGT*SCSADLPTLPCTSQ
Trigger: CTGTGAAGTGCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGTGTGGAAAGCAGACTTGGAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp GCTCCCCCTGGAGAGAATGAAAGAGAGCCTCATCGTGACTGTACATaGCTCCGAGAAGCTGGTCTTCCAGGTGTAGGAGCTTCACGCCTA +
Preference number: 5 (lower is better)
Translates to: APPGENEREPHRDCT*LREAGLPGVGASRL
Trigger: TAGGCGTGAAGCTCCTACACCTGGAAGACCAGCTTCTCGGAGCCATGTACAGTCACGATGAGGCTCTCTTTCATTCTCTCCAGGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074562.11
ENSMUST00000115885.9
CDS-3UTR CAA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGGGACAAGGGAGCTCTaGAGAAAAGGCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPGTREL*RKGLPT
Trigger: GGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCC...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAAGGCCCCTTGATCCCTaGTTCCAGGGTGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPARPLDP*FQGASR
Trigger: CCTTGATGCACCCTGGAACAAGGGATCAAGGGGCCT...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTTCAGCCGTTTTTCCTTaGCCTCCAGCGCAGACATCC +
Preference number: 5 (lower is better)
Translates to: LRFVGSWHWSVCRKTPAGSAVFP*PPAQTS
Trigger: GGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGA...ACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCACTCCTGCCTCCTTTGTaGGCTGGAGCTGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPLLPPL*AGAAGS
Trigger: TGATCCTGCAGCTCCAGCCAACAAAGGAGGCAGGAG...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS GCA 90 bp GCCTCCAGCGCAGACATCCGTGCTTGGAGAGCTTCGATTTCCTTCTaGAATCGCTGTTTCTCTCGAATAAGCCAGTCCCTCCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: ASSADIRAWRASISF*NRCFSRISQSLLVM
Trigger: CATCACCAGGAGGGACTGGCTTATTCGAGAGAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS-3UTR CAA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGGGACAAGGGAGCTCTaGAGAAAAGGCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVGTREL*RKGLPT
Trigger: GGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCC...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp AAAGGCGTGTGCCACCATGCCCAGCTGCAGGACCGGCATTTTCTTCCCTCTTCCAGTCAGCCTCTCAGATaGTCTGCTGTCATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: KGVCHHAQLQDRHFLPSSSQPLR*SAVILG
Trigger: TCCAAGAATGACAGCAGACAATCTGAGAGGCTGACT...GGAAGAGGGAAGAAAATGCCGGTCCTGCAGCTGGGCATGGTGGCACACGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp GAGACTCCCACAAGATTCAACCACACAGCTCCCAGGATGAAGGAGGCTGAGACCAGCACCAAGGGAGAGTaGGATGAAGCTGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ETPTRFNHTAPRMKEAETSTKGE*DEAEAG
Trigger: TCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGCT...GGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCATCAGCCGTTTTTCCTTaGCCTCCAGCGCAGACATCC +
Preference number: 5 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPSAVFP*PPAQTS
Trigger: GGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGA...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp GTAGCAGCGGCATTGGCAGTGGTGGTTGTGAGCTGCAGCCATTACCTTGGAACACTGCTCCTCCAACTCTaGGCTCAGCCGTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: VAAALAVVVVSCSHYLGTLLLQL*AQPFFL
Trigger: AAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAG...TGTTCCAAGGTAATGGCTGCAGCTCACAACCACCACTGCCAATGCCGCTGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGCTCCTGCCTCCTTTGTaGGCTGGAGCTGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVLLPPL*AGAAGS
Trigger: TGATCCTGCAGCTCCAGCCAACAAAGGAGGCAGGAG...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS GCA 90 bp CTCTTGGCTCAGCCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTaGTTGGAGAGCTTCGATTTCCTTCTGCAATCGCTGTTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: LLAQPFFLCLQRRHP*LESFDFLLQSLFLS
Trigger: CGAGAGAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp CTCAGATTGTCTGCTGTCATTCTTGGAATGAACCGCAAAGTGCACTaGTCTTTTTCTCATAGAGCGCTGGGCTGGGTGCAGGTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRLSAVILGMNRKVH*SFSHRALGWVQVAL
Trigger: GAGGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTTTGCGGTTCATTCCAAGAATGACAGCAGACAATCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCAGGAAGTGAAGGTGTCTaGGAAGCCGGGAAGGGATGC +
Preference number: 5 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISGSEGV*EAGKGC
Trigger: GCATCCCTTCCCGGCTTCCAAGACACCTTCACTTCC...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp CAGACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAAGCACCAAGGGAGAGTaGGATGAAGCTGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QTLRFVGSWHWSVCRKTPSTKGE*DEAEAG
Trigger: TCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGCT...TGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp GCAGCCATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACCGCAGACATCCGTGCTaGGAGAGCTTCGATTTCCTT +
Preference number: 5 (lower is better)
Translates to: AAITLEHKGCTLLRHPVDRRHPC*ESFDFL
Trigger: AAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCG...GTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS TCA 90 bp AGTCTCCTCCTCAGAGAGCTGCACAGCTTCTCACCTGAGCACACCTaGGCAGTGAGTTCTCTGACAGCCAGGTTCAGTGATTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SLLLRELHSFSPEHT*AVSSLTARFSDFVL
Trigger: AAGGACAAAATCACTGAACCTGGCTGTCAGAGAACTCACTGCTCAGGTGTGCTCAGGTGAGAAGCTGTGCAGCTCTCTGAGGAGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp TGGCTCAGCCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTGCTTaGAGAGCTTCGATTTCCTTCTGCAATCGCTGTTTCTCTCGAATA +
Preference number: 5 (lower is better)
Translates to: WLSRFSFASSADIRA*RASISFCNRCFSRI
Trigger: TATTCGAGAGAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 90 bp TGGCTCCGAGAAGCTGGTCTTCCAGGTGTAGGAGCTTCACGCCTATaGCTTCGCACTTTTCTCCAACTTCAGCAGAAACGATGTGAGAAT +
Preference number: 5 (lower is better)
Translates to: WLREAGLPGVGASRL*LRTFLQLQQKRCEN
Trigger: ATTCTCACATCGTTTCTGCTGAAGTTGGAGAAAAGTGCGAAGCCATAGGCGTGAAGCTCCTACACCTGGAAGACCAGCTTCTCGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS-3UTR CAA 90 bp ACTCTGAGGTTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAAGTCAGCCTCTCAGATaGTCTGCTGTCATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: TLRFVGSWHWSVCRKTPASQPLR*SAVILG
Trigger: TCCAAGAATGACAGCAGACAATCTGAGAGGCTGACT...TGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAACCTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp ATTACCTTGGAACATAAAGGCTGCACCTTGCTGAGGCACCCTGTAGACATCTCCCGCAGACATCCGTGCTaGGAGAGCTTCGATTTCCTT +
Preference number: 5 (lower is better)
Translates to: ITLEHKGCTLLRHPVDISRRHPC*ESFDFL
Trigger: AAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCG...GGAGATGTCTACAGGGTGCCTCAGCAAGGTGCAGCCTTTATGTTCCAAGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp TCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGGCCATTTCACTGCTCCTCCAACTCTaGGCTCAGCCGTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SWHWSVCRKTPAGIVAISLLLQL*AQPFFL
Trigger: AAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAG...TGAAATGGCCACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS-3UTR CAA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGAGTCAGCCTCTCAGATaGTCTGCTGTCATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVSQPLR*SAVILG
Trigger: TCCAAGAATGACAGCAGACAATCTGAGAGGCTGACT...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117658.8
ENSMUST00000118942.8
CDS TCA 90 bp AATGACCCAGTCAGCCTCTCAGATTGTCTGCTGTCATTCTTGGAATaGACCGCAAAGTGCACTGGTCTTTTTCTCATAGAGCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NDPVSLSDCLLSFLE*TAKCTGLFLIERWA
Trigger: AGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTTTGCGGTTCATTCCAAGAATGACAGCAGACAATCTGAGAGGCTGACTGGGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS-3UTR CAA 90 bp TTTGTGGGCTCCTGGCATTGGAGTGTCTGTAGAAAGACCCCAGCAGGTATAGTGTGCACTTCACAGTGTTaGCCTTCATGCGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FVGSWHWSVCRKTPAGIVCTSQC*PSCVFC
Trigger: ACAAAACACGCATGAAGGCAAACACTGTGAAGTGCA...CACTATACCTGCTGGGGTCTTTCTACAGACACTCCAATGCCAGGAGCCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118942.8
CDS GCA 90 bp AGGCTAGGAGCCAGAGACTTAAAGCTGTCTGAAGATAATAATTCTTaGCAAAACCCACTGTCCCCAGGCTTAAATGACCCAGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RLGARDLKLSEDNNS*QNPLSPGLNDPVSL
Trigger: GAGGCTGACTGGGTCATTTAAGCCTGGGGACAGTGGGTTTTGGCAAGAATTATTATCTTCAGACAGCTTTAAGTCTCTGGCTCCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp GTATGCCATCCATGGGCATCGGCCCAGCCGCCGCCCTaGTCGCCCCGCCCACCAGCGGAGGATGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: VCHPWASAQPPP*SPRPPAEDASW
Trigger: CCAGGATGCATCCTCCGCTGGTGGGCGGGGCGACCAGGGCGGCGGCTGGGCCGATGCCCATGGATGGCATAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp GCCGCCGCCCTGGTCGCCCCGCCCACCAGCGGAGGATaGATCCTGGGAAGAGAAGCCAGTGTCCGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: AAALVAPPTSGG*ILGREASVRGG
Trigger: TCCTCCTCGGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGGCGGGGCGACCAGGGCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp ACTGCAGGCGGTAAGCCATGCCCACTGTCTGCGCCGTaGCTCGGACTGTGGATCGGAGCGCCCCGGGGACCC +
Preference number: 6 (lower is better)
Translates to: TAGGKPCPLSAP*LGLWIGAPRGP
Trigger: GGGTCCCCGGGGCGCTCCGATCCACAGTCCGAGCCACGGCGCAGACAGTGGGCATGGCTTACCGCCTGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000122389.8
CDS CCA 72 bp CCCTGGTCGCCCCGCCCACCAGCGGAGGATGCATCCTaGGAAGAGAAGCCAGTGTCCGAGGAGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: PWSPRPPAEDAS*EEKPVSEEEEE
Trigger: CTCCTCCTCCTCCTCGGACACTGGCTTCTCTTCCCAGGATGCATCCTCCGCTGGTGGGCGGGGCGACCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp ATGGGCTCCCATTCCCTGAGCAATGTATGCCATCCATaGGCATCGGCCCAGCCGCCGCCCTGGTCGCCCCGC +
Preference number: 6 (lower is better)
Translates to: MGSHSLSNVCHP*ASAQPPPWSPR
Trigger: GCGGGGCGACCAGGGCGGCGGCTGGGCCGATGCCCATGGATGGCATACATTGCTCAGGGAATGGGAGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp GGGTGGGGTGTTCGAGGGACAGCCAGAGCAGCTGTCTaGGCGGCCTCTCCTGTGCTATGCACCTGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: GWGVRGTARAAV*AASPVLCTCSS
Trigger: CGAGGAGCAGGTGCATAGCACAGGAGAGGCCGCCCAGACAGCTGCTCTGGCTGTCCCTCGAACACCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp GAGCCAAGTCCGCCAAGCCTGGAGCAGCGTGAAGACTaGAGGTCCAGAGATGCCGAGGATCCCCGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: EPSPPSLEQRED*RSRDAEDPRGA
Trigger: GGCCCCACGGGGATCCTCGGCATCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTTGGCGGACTTGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp GCTGGCCTGTCAGCCCTGCTGAGCTCGGGTGTGGCATaGCCACTGCTGGAGAGAGGAACCCGATCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: AGLSALLSSGVA*PLLERGTRSQN
Trigger: GTTCTGGGATCGGGTTCCTCTCTCCAGCAGTGGGCATGCCACACCCGAGCTCAGCAGGGCTGACAGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp CCGCACTGTCCAGCCTTGGACTGTGAGTGTTGGGACTaGTGGCCTGTCAGCCCTGCTGAGCTCGGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: PHCPALDCECWD*WPVSPAELGCG
Trigger: GCCACACCCGAGCTCAGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp CCCGATCCCAGAACCCGCTGTGCTTCTCATGTAGCCTaGTCTCCGTGTCAGCCGCCGCCTCTGAGGGGCTAC +
Preference number: 6 (lower is better)
Translates to: PDPRTRCASHVA*SPCQPPPLRGY
Trigger: GTAGCCCCTCAGAGGCGGCGGCTGACACGGAGACCAGGCTACATGAGAAGCACAGCGGGTTCTGGGATCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp CTGAGGGTCTCAGGTGGCTCCACCTGGAAGGGAGCCTaGTTGGCAGAGGTCAGGGTCTCTCCCAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LRVSGGSTWKGA*LAEVRVSPKAL
Trigger: CAAGGCCTTGGGAGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCCAGGTGGAGCCACCTGAGACCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp AGGGTCTCAGGTGGCTCCACCTGGAAGGGAGCCTGGTaGGCAGAGGTCAGGGTCTCTCCCAAGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RVSGGSTWKGAW*AEVRVSPKALL
Trigger: CAGCAAGGCCTTGGGAGAGACCCTGACCTCTGCCAACCAGGCTCCCTTCCAGGTGGAGCCACCTGAGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 90 bp GTCACAGCCCGGCCACCGGAGCAGCACCTCCTGCTCCTCCAACTCTaGGCTCAGCCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTGC +
Preference number: 6 (lower is better)
Translates to: VTARPPEQHLLLLQL*AQPFFLCLQRRHPC
Trigger: GCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTGCTCCGGTGGCCGGGCTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 90 bp CCCTCAGAGGCCACAGCAGGGACAAGGGAGCTCTTGAGAAAAGGCTaGCCCACCAGTGAGGCTTGGCAGTGGCTCCCAGGGTCAAGTCCG +
Preference number: 6 (lower is better)
Translates to: PSEATAGTRELLRKG*PTSEAWQWLPGSSP
Trigger: CGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCCTGCTGTGGCCTCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp CTGCTGGAGAGAGGAACCCGATCCCAGAACCCGCTGTaGTTCTCATGTAGCCTGGTCTCCGTGTCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: LLERGTRSQNPL*FSCSLVSVSAA
Trigger: GGCGGCTGACACGGAGACCAGGCTACATGAGAAGCACAGCGGGTTCTGGGATCGGGTTCCTCTCTCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp CACTGTCCAGCCTTGGACTGTGAGTGTTGGGACTGCTaGCCTGTCAGCCCTGCTGAGCTCGGGTGTGGCATG +
Preference number: 6 (lower is better)
Translates to: HCPALDCECWDC*PVSPAELGCGM
Trigger: CATGCCACACCCGAGCTCAGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp TCAAGTCCGCACTGTCCAGCCTTGGACTGTGAGTGTTaGGACTGCTGGCCTGTCAGCCCTGCTGAGCTCGGG +
Preference number: 6 (lower is better)
Translates to: SSPHCPALDCEC*DCWPVSPAELG
Trigger: CCCGAGCTCAGCAGGGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGGACTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp AGTGGCTCCCAGGGTCAAGTCCGCACTGTCCAGCCTTaGACTGTGAGTGTTGGGACTGCTGGCCTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGSQGQVRTVQP*TVSVGTAGLSA
Trigger: GGCTGACAGGCCAGCAGTCCCAACACTCACAGTCCAAGGCTGGACAGTGCGGACTTGACCCTGGGAGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp GTGGGGCTTCTGGATCATCGCTGCCGGCCCTTTGGGTaGCTCCATGCAAGGCCACCTGTATCTGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VGLLDHRCRPFG*LHARPPVSVLP
Trigger: TGGCAGCACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GGCGGTAGTCCTCAGCTGTCCTTCAAGTGGGGCTTCTaGATCATCGCTGCCGGCCCTTTGGGTGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: GGSPQLSFKWGF*IIAAGPLGGSM
Trigger: CATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGAAGGACAGCTGAGGACTACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp CATGGGCCTGCAGCACAGTGTGGTGAAAGAGCTGAGTaGGTGTCCCACTCCTGGAGCACCTGCAAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: HGPAAQCGERAE*VSHSWSTCKGD
Trigger: GTCCCCCTTGCAGGTGCTCCAGGAGTGGGACACCCACTCAGCTCTTTCACCACACTGTGCTGCAGGCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp CGGCCACCGGAGCAGCACCTCCTGCTCCTCCAACTCTaGGCTCAGCCGTTTTTCCTTTGCCTCCAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RPPEQHLLLLQL*AQPFFLCLQRR
Trigger: TCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTGCTCCGGTGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp GGCCCTCAGAGGCCACAGCAGGGACAAGGGAGCTCTTaGGAAAAGGCTTGCCCACCAGTGAGGCTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: GPQRPQQGQGSS*EKACPPVRLGS
Trigger: ACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTCCCTGCTGTGGCCTCTGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 72 bp GCGTCCTGGAGTGCCAGGTCCTGCCTGCACCTGAGGTaGTCCTCTTTGACGATGCCCAGCCTTCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: ASWSARSCLHLR*SSLTMPSLLLF
Trigger: GAACAGCAGAAGGCTGGGCATCGTCAAAGAGGATCACCTCAGGTGCAGGCAGGACCTGGCACTCCAGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp CAGAGGTTCGGCCTCTCTGGATGGCAGGCAACCTTCTaGTTCTCCGCGTTCTCCAGCAGCACCAAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: QRFGLSGWQATF*FSAFSSSTKGE
Trigger: CTCTCCCTTGGTGCTGCTGGAGAACGCGGAGAAGCAGAAGGTTGCCTGCCATCCAGAGAGGCCGAACCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp TCAGCTGTCCTTCAAGTGGGGCTTCTGGATCATCGCTaGCGGCCCTTTGGGTGGCTCCATGCAAGGCCACCT +
Preference number: 6 (lower is better)
Translates to: SAVLQVGLLDHR*RPFGWLHARPP
Trigger: AGGTGGCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGAAGGACAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GCTGCTCCTTGTCACCTGAGCCAAGTCCGCCAAGCCTaGAGCAGCGTGAAGACTGAAGGTCCAGAGATGCCG +
Preference number: 6 (lower is better)
Translates to: AAPCHLSQVRQA*SSVKTEGPEMP
Trigger: CGGCATCTCTGGACCTTCAGTCTTCACGCTGCTCCAGGCTTGGCGGACTTGGCTCAGGTGACAAGGAGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp GCTATCCTGGGCGGTAGTCCTCAGCTGTCCTTCAAGTaGGGCTTCTGGATCATCGCTGCCGGCCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: AILGGSPQLSFK*GFWIIAAGPLG
Trigger: ACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGAAGGACAGCTGAGGACTACCGCCCAGGATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp CAGTCCCTCCTGGTGATGGATGCAGGCAGGCTATCCTaGGCGGTAGTCCTCAGCTGTCCTTCAAGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: QSLLVMDAGRLS*AVVLSCPSSGA
Trigger: AGCCCCACTTGAAGGACAGCTGAGGACTACCGCCCAGGATAGCCTGCCTGCATCCATCACCAGGAGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp TTTTGTCCTTTCCCGGAGGCTCCTGAGGGTCTCAGGTaGCTCCACCTGGAAGGGAGCCTGGTTGGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: FCPFPEAPEGLR*LHLEGSLVGRG
Trigger: ACCTCTGCCAACCAGGCTCCCTTCCAGGTGGAGCCACCTGAGACCCTCAGGAGCCTCCGGGAAAGGACAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp GACAAGGGAGCTCTTGAGAAAAGGCTTGCCCACCAGTaGGGCTTGGCAGTGGCTCCCAGGGTCAAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: DKGALEKRLAHQ*GLAVAPRVKSA
Trigger: TGCGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTCCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 72 bp CAGGTAACCCAAGAAGCTGCGAAGAGCAGGTTGCTGTaGAGGCAGAGCCCAGGACAGGCGGCCTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: QVTQEAAKSRLL*RQSPGQAAFLL
Trigger: CAGGAGAAAGGCCGCCTGTCCTGGGCTCTGCCTTCACAGCAACCTGCTCTTCGCAGCTTCTTGGGTTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp CCAGGTTCAGTGATTTTGTCCTTTCCCGGAGGCTCCTaGGGGTCTCAGGTGGCTCCACCTGGAAGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: PGSVILSFPGGS*GSQVAPPGREP
Trigger: AGGCTCCCTTCCAGGTGGAGCCACCTGAGACCCTCAGGAGCCTCCGGGAAAGGACAAAATCACTGAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp AGGAGGAGGAGGAGACCGTGCCACATTCTGATTGCCTaGTGCTGCTCCTTGTCACCTGAGCCAAGTCCGCCA +
Preference number: 6 (lower is better)
Translates to: RRRRRPCHILIA*CCSLSPEPSPP
Trigger: TGGCGGACTTGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCACGGTCTCCTCCTCCTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp ATCAGGTCACAGCCCGGCCACCGGAGCAGCACCTCCTaGTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: IRSQPGHRSSTS*SSNSWLSRFSF
Trigger: AAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTGCTCCGGTGGCCGGGCTGTGACCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp TATGCACCTGCTCCTCGTCCTCTGCGTGTGGGCTGCTaGCTGCTTCCTGAAGCTGCAGGCTCTGCATTAGCA +
Preference number: 6 (lower is better)
Translates to: YAPAPRPLRVGC*LLPEAAGSALA
Trigger: TGCTAATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAGAGGACGAGGAGCAGGTGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp TGCTATGCACCTGCTCCTCGTCCTCTGCGTGTGGGCTaGTGCCTGCTTCCTGAAGCTGCAGGCTCTGCATTA +
Preference number: 6 (lower is better)
Translates to: CYAPAPRPLRVG*CLLPEAAGSAL
Trigger: TAATGCAGAGCCTGCAGCTTCAGGAAGCAGGCAGCAGCCCACACGCAGAGGACGAGGAGCAGGTGCATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp GCTGAGGCCTCTCCTGCCTCCTTTGTTGGCTGGAGCTaGAGGATCATGGCCTGCAGTGTTTCCTTCACCGTC +
Preference number: 6 (lower is better)
Translates to: AEASPASFVGWS*RIMACSVSFTV
Trigger: GACGGTGAAGGAAACACTGCAGGCCATGATCCTGCAGCTCCAGCCAACAAAGGAGGCAGGAGAGGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp TTGAGAAAAGGCTTGCCCACCAGTGAGGCTTGGCAGTaGCTCCCAGGGTCAAGTCCGCACTGTCCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: LRKGLPTSEAWQ*LPGSSPHCPAL
Trigger: CAAGGCTGGACAGTGCGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp GAGCTCTTGAGAAAAGGCTTGCCCACCAGTGAGGCTTaGCAGTGGCTCCCAGGGTCAAGTCCGCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: ELLRKGLPTSEA*QWLPGSSPHCP
Trigger: TGGACAGTGCGGACTTGACCCTGGGAGCCACTGCCAAGCCTCACTGGTGGGCAAGCCTTTTCTCAAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp AAAGTGCACTGGTCTTTTTCTCATAGAGCGCTGGGCTaGGTGCAGGTGGCCCTCAGAGGCCACAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: KVHWSFSHRALG*VQVALRGHSRD
Trigger: GTCCCTGCTGTGGCCTCTGAGGGCCACCTGCACCCAGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp TCTCTTGGGGCCTCTGATGCAGAGGTTCGGCCTCTCTaGATGGCAGGCAACCTTCTGCTTCTCCGCGTTCTC +
Preference number: 6 (lower is better)
Translates to: SLGASDAEVRPL*MAGNLLLLRVL
Trigger: GAGAACGCGGAGAAGCAGAAGGTTGCCTGCCATCCAGAGAGGCCGAACCTCTGCATCAGAGGCCCCAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp TCAAGTGGGGCTTCTGGATCATCGCTGCCGGCCCTTTaGGTGGCTCCATGCAAGGCCACCTGTATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: SSGASGSSLPAL*VAPCKATCICA
Trigger: AGCACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp CTGTGGAGAAGCAGCTTCCTGATAGGGCCAGCATCTTaGCTTCCAGCAAGGCAGGCAGCCTGGTGTCGAGGT +
Preference number: 6 (lower is better)
Translates to: LWRSSFLIGPAS*LPARQAAWCRG
Trigger: ACCTCGACACCAGGCTGCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTATCAGGAAGCTGCTTCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp AGACCGTGCCACATTCTGATTGCCTGCTGCTGCTCCTaGTCACCTGAGCCAAGTCCGCCAAGCCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: RPCHILIACCCS*SPEPSPPSLEQ
Trigger: CTGCTCCAGGCTTGGCGGACTTGGCTCAGGTGACAAGGAGCAGCAGCAGGCAATCAGAATGTGGCACGGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CAA 72 bp TTCAAGTGGGGCTTCTGGATCATCGCTGCCGGCCCTTaGGGTGGCTCCATGCAAGGCCACCTGTATCTGTGC +
Preference number: 6 (lower is better)
Translates to: FKWGFWIIAAGP*GGSMQGHLYLC
Trigger: GCACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAGGGCCGGCAGCGATGATCCAGAAGCCCCACTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 90 bp AGCTCCTTGGCTGTGGAGAAGCAGCTTCCTGATAGGGCCAGCATCTaGGCTTCCAGCAAGGCAGGCAGCCTGGTGTCGAGGTCACTGAGT +
Preference number: 6 (lower is better)
Translates to: SSLAVEKQLPDRASI*ASSKAGSLVSRSLS
Trigger: ACTCAGTGACCTCGACACCAGGCTGCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTATCAGGAAGCTGCTTCTCCACAGCCAAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp TCAGTAGGTAGTCCTGCAGCATGGGCTCCCATTCCCTaGGCAATGTATGCCATCCATGGGCATCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SVGSPAAWAPIP*AMYAIHGHRPS
Trigger: GCTGGGCCGATGCCCATGGATGGCATACATTGCTCAGGGAATGGGAGCCCATGCTGCAGGACTACCTACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp CCTTTGGGTGGCTCCATGCAAGGCCACCTGTATCTGTaGTGCCAGGTAACCCAAGAAGCTGCGAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PLGGSMQGHLYL*CQVTQEAAKSR
Trigger: CCTGCTCTTCGCAGCTTCTTGGGTTACCTGGCAGCACAGATACAGGTGGCCTTGCATGGAGCCACCCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp AGTCTGCTTTCCACACTCTCCCAAGCAGCGGGCACCTaGAGCTGCTCAGCTGACCTTCCAACACTTCCATGC +
Preference number: 6 (lower is better)
Translates to: SLLSTLSQAAGT*SCSADLPTLPC
Trigger: GCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGTGTGGAAAGCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp ATGCACTTCACAGTGTTTGCCTTCATGCGTGTTTTGTaGGCGGCGTCCTGGAGTGCCAGGTCCTGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: MHFTVFAFMRVL*AASWSARSCLH
Trigger: GTGCAGGCAGGACCTGGCACTCCAGGACGCCGCCCACAAAACACGCATGAAGGCAAACACTGTGAAGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp CAGTGTGGTGAAAGAGCTGAGTGGGTGTCCCACTCCTaGAGCACCTGCAAGGGGGACTTTTCTTCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: QCGERAEWVSHS*STCKGDFSSSG
Trigger: CCCCGAAGAAGAAAAGTCCCCCTTGCAGGTGCTCCAGGAGTGGGACACCCACTCAGCTCTTTCACCACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp TCTGACGACAAGGCCCAAATCTCCTCCGTGAGCTCCTaGGCTGTGGAGAAGCAGCTTCCTGATAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SDDKAQISSVSS*AVEKQLPDRAS
Trigger: GCTGGCCCTATCAGGAAGCTGCTTCTCCACAGCCAAGGAGCTCACGGAGGAGATTTGGGCCTTGTCGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 90 bp GCAGCACCTCCTGCTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTaGCCTCCAGCGCAGACATCCGTGCTTGGAGAGCTTCGATTTCCT +
Preference number: 6 (lower is better)
Translates to: AAPPAPPTLGSAVFP*PPAQTSVLGELRFP
Trigger: AGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGGAGGTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp GAGTCTCCTCCTCAGAGAGCTGCACAGCTTCTCACCTaGGCACACCTGAGCAGTGAGTTCTCTGACAGCCAG +
Preference number: 6 (lower is better)
Translates to: ESPPQRAAQLLT*AHLSSEFSDSQ
Trigger: CTGGCTGTCAGAGAACTCACTGCTCAGGTGTGCTCAGGTGAGAAGCTGTGCAGCTCTCTGAGGAGGAGACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp TTGGGTGGCTCCATGCAAGGCCACCTGTATCTGTGCTaGCAGGTAACCCAAGAAGCTGCGAAGAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LGGSMQGHLYLC*QVTQEAAKSRL
Trigger: CAACCTGCTCTTCGCAGCTTCTTGGGTTACCTGGCAGCACAGATACAGGTGGCCTTGCATGGAGCCACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp TTTCTCTCGAATAAGCCAGTCCCTCCTGGTGATGGATaGAGGCAGGCTATCCTGGGCGGTAGTCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: FLSNKPVPPGDG*RQAILGGSPQL
Trigger: CAGCTGAGGACTACCGCCCAGGATAGCCTGCCTGCATCCATCACCAGGAGGGACTGGCTTATTCGAGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp CTGCTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTTaGCTCCAGCGCAGACATCCGTGCTTGGAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: LLLQLLAQPFFL*LQRRHPCLESF
Trigger: GAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp CTTTCCACACTCTCCCAAGCAGCGGGCACCTGCAGCTaGTCAGCTGACCTTCCAACACTTCCATGCACTTCA +
Preference number: 6 (lower is better)
Translates to: LSTLSQAAGTCS*SADLPTLPCTS
Trigger: TGAAGTGCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGTGTGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp CCTGCTCCTCCAACTCTTGGCTCAGCCGTTTTTCCTTaGCCTCCAGCGCAGACATCCGTGCTTGGAGAGCTT +
Preference number: 6 (lower is better)
Translates to: PAPPTLGSAVFP*PPAQTSVLGEL
Trigger: AAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAAGAGTTGGAGGAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp TCGGATAGGAAGCTGAGGCCTCTCCTGCCTCCTTTGTaGGCTGGAGCTGCAGGATCATGGCCTGCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: SDRKLRPLLPPL*AGAAGSWPAVF
Trigger: AAACACTGCAGGCCATGATCCTGCAGCTCCAGCCAACAAAGGAGGCAGGAGAGGCCTCAGCTTCCTATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 90 bp ACCAAGGGAGAGTTGGATGAAGCTGAAGCTGGAAGTGAAGGTGTCTaGGAAGCCGGGAAGGGATGCGATATCAGCGGGGCCATTCAACGC +
Preference number: 6 (lower is better)
Translates to: TKGELDEAEAGSEGV*EAGKGCDISGAIQR
Trigger: GCGTTGAATGGCCCCGCTGATATCGCATCCCTTCCCGGCTTCCAAGACACCTTCACTTCCAGCTTCAGCTTCATCCAACTCTCCCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS TCA 72 bp ACTCTCCCAAGCAGCGGGCACCTGCAGCTGCTCAGCTaGCCTTCCAACACTTCCATGCACTTCACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: TLPSSGHLQLLS*PSNTSMHFTVF
Trigger: AAACACTGTGAAGTGCATGGAAGTGTTGGAAGGTCAGCTGAGCAGCTGCAGGTGCCCGCTGCTTGGGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GCTTCTCCGCGTTCTCCAGCAGCACCAAGGGAGAGTTaGATGAAGCTGAAGCTGGAAGTGAAGGTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: ASPRSPAAPRES*MKLKLEVKVSW
Trigger: CCAAGACACCTTCACTTCCAGCTTCAGCTTCATCCAACTCTCCCTTGGTGCTGCTGGAGAACGCGGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CAA 90 bp TTCACAGTGTTTGCCTTCATGCGTGTTTCTGATAGGGCCAGCATCTaGGCTTCCAGCAAGGCAGGCAGCCTGGTGTCGAGGTCACTGAGT +
Preference number: 6 (lower is better)
Translates to: FTVFAFMRVSDRASI*ASSKAGSLVSRSLS
Trigger: ACTCAGTGACCTCGACACCAGGCTGCCTGCCTTGCTGGAAGCCAAGATGCTGGCCCTATCAGAAACACGCATGAAGGCAAACACTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075730.11
ENSMUST00000115885.9
ENSMUST00000117658.8
CDS TCA 72 bp CTCAGAGAGCTGCACAGCTTCTCACCTGAGCACACCTaGGCAGTGAGTTCTCTGACAGCCAGGTTCAGTGAT +
Preference number: 6 (lower is better)
Translates to: LRELHSFSPEHT*AVSSLTARFSD
Trigger: ATCACTGAACCTGGCTGTCAGAGAACTCACTGCTCAGGTGTGCTCAGGTGAGAAGCTGTGCAGCTCTCTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp CAGCCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTaGTTGGAGAGCTTCGATTTCCTTCTGCAATCGCTG +
Preference number: 6 (lower is better)
Translates to: QPFFLCLQRRHP*LESFDFLLQSL
Trigger: CAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp CTGACCTTCCAACACTTCCATGCACTTCACAGTGTTTaGCTTCATGCGTGTTTTGTGGGCGGCGTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: LTFQHFHALHSV*LHACFVGGVLE
Trigger: CTCCAGGACGCCGCCCACAAAACACGCATGAAGGCAAACACTGTGAAGTGCATGGAAGTGTTGGAAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074562.11
ENSMUST00000098311.11
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GGAGAGACTGAAAGAGAGCCTCATCGTGACTGTACATaGCTCCGAGAAGCTGGTCTTCCAGGTGTAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GETEREPHRDCT*LREAGLPGVGA
Trigger: AGCTCCTACACCTGGAAGACCAGCTTCTCGGAGCCATGTACAGTCACGATGAGGCTCTCTTTCAGTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GGAGAGAATGAAAGAGAGCCTCATCGTGACTGTACATaGCTCCGAGAAGCTGGTCTTCCAGGTGTAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GENEREPHRDCT*LREAGLPGVGA
Trigger: AGCTCCTACACCTGGAAGACCAGCTTCTCGGAGCCATGTACAGTCACGATGAGGCTCTCTTTCATTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074562.11
ENSMUST00000115885.9
CDS CAA 90 bp TTGGCTCAGCCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTGCTaGGAGAGCTTCGATTTCCTTCTGCAATCGCTGTTTCTCTCGAAT +
Preference number: 6 (lower is better)
Translates to: LAQPFFLCLQRRHPC*ESFDFLLQSLFLSN
Trigger: ATTCGAGAGAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGGCTGAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS GCA 72 bp GCAGACATCCGTGCTTGGAGAGCTTCGATTTCCTTCTaGAATCGCTGTTTCTCTCGAATAAGCCAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ADIRAWRASISF*NRCFSRISQSL
Trigger: GAGGGACTGGCTTATTCGAGAGAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp TCTGCTGTCATTCTTGGAATGAACCGCAAAGTGCACTaGTCTTTTTCTCATAGAGCGCTGGGCTGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SAVILGMNRKVH*SFSHRALGWVQ
Trigger: CTGCACCCAGCCCAGCGCTCTATGAGAAAAAGACCAGTGCACTTTGCGGTTCATTCCAAGAATGACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS CCA 72 bp CGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTGCTTaGAGAGCTTCGATTTCCTTCTGCAATCGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: RFSFASSADIRA*RASISFCNRCF
Trigger: GAAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CCA 72 bp GAAGCTGGTCTTCCAGGTGTAGGAGCTTCACGCCTATaGCTTCGCACTTTTCTCCAACTTCAGCAGAAACGA +
Preference number: 6 (lower is better)
Translates to: EAGLPGVGASRL*LRTFLQLQQKR
Trigger: TCGTTTCTGCTGAAGTTGGAGAAAAGTGCGAAGCCATAGGCGTGAAGCTCCTACACCTGGAAGACCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS CAA 72 bp CCGTTTTTCCTTTGCCTCCAGCGCAGACATCCGTGCTaGGAGAGCTTCGATTTCCTTCTGCAATCGCTGTTT +
Preference number: 6 (lower is better)
Translates to: PFFLCLQRRHPC*ESFDFLLQSLF
Trigger: AAACAGCGATTGCAGAAGGAAATCGAAGCTCTCCAAGCACGGATGTCTGCGCTGGAGGCAAAGGAAAAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
CDS TCA 72 bp GTCAGCCTCTCAGATTGTCTGCTGTCATTCTTGGAATaGACCGCAAAGTGCACTGGTCTTTTTCTCATAGAG +
Preference number: 6 (lower is better)
Translates to: VSLSDCLLSFLE*TAKCTGLFLIE
Trigger: CTCTATGAGAAAAAGACCAGTGCACTTTGCGGTTCATTCCAAGAATGACAGCAGACAATCTGAGAGGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8
CDS GCA 72 bp GCCAGAGACTTAAAGCTGTCTGAAGATAATAATTCTTaGCAAAACCCACTGTCCCCAGGCTTAAATGACCCA +
Preference number: 6 (lower is better)
Translates to: ARDLKLSEDNNS*QNPLSPGLNDP
Trigger: TGGGTCATTTAAGCCTGGGGACAGTGGGTTTTGGCAAGAATTATTATCTTCAGACAGCTTTAAGTCTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000074562.11
ENSMUST00000075730.11
ENSMUST00000098311.11
ENSMUST00000115885.9
ENSMUST00000117658.8
ENSMUST00000118942.8
ENSMUST00000121953.2
ENSMUST00000122389.8