RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIS3L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053333

Ensembl transcript IDs: ENSMUST00000065694.8, ENSMUST00000168237.8, ENSMUST00000190618.7

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCAGGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTaGCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGCACAGGCC +
Preference number: 1 (lower is better)
Translates to: WAGKGSGSPGRSGAA*PGGLGSSLLREAQA
Trigger: GGCCTGTGCTTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR TCA 90 bp CATCCATGGGCAGCCCCATCTGGTCACAGAACTCCACCAGGTCACTaGGCATCTTCGTCTGTGGTGGGGGATGCCGGCGCAGCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: HPWAAPSGHRTPPGH*ASSSVVGDAGAAGP
Trigger: AGGCCCTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAGTTCTGTGACCAGATGGGGCTGCCCATGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp AACTCACATCGGCGATGTGGACGCCCACTTCGAAGGTGCCATCAGTaGGCCGCCTGCAGGCGAGGGCATCATCAAGGTCGCGAGCAGTTG +
Preference number: 1 (lower is better)
Translates to: NSHRRCGRPLRRCHQ*AACRRGHHQGREQL
Trigger: CAACTGCTCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGGCACCTTCGAAGTGGGCGTCCACATCGCCGATGTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 90 bp GGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTGCTTTGCAATaGTGTGCAGGTTCAGGACTGCCTGGTGCACCTCCTCGACGCTGT +
Preference number: 1 (lower is better)
Translates to: GVRHLQSAGGGVALQ*CAGSGLPGAPPRRC
Trigger: ACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 90 bp GTGCAGGTTCAGGACTGCCTGGTGCACCTCCTCGACGCTGTGCTCTaGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTTGG +
Preference number: 1 (lower is better)
Translates to: VQVQDCLVHLLDAVL*RNWGKLFLRDLLSW
Trigger: CCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 90 bp TGGCTCCTCTTCAAGGTCATCAGGCTCCCAAACAAGAGTGAGCTCTaGCTTCTTCCCCACCTTCTGGAAGCTGTAGGATCGCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: WLLFKVIRLPNKSEL*LLPHLLEAVGSQGQ
Trigger: CTGGCCCTGCGATCCTACAGCTTCCAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGCCTGATGACCTTGAAGAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 90 bp CTGAGCTCCTGCACACGTTTGGAAGCCATGCGACGGTCATTGCAGTaGTCAGCTTGCTTCTGTAGGGTATCAGGCTCCACATCTGGCTGT +
Preference number: 1 (lower is better)
Translates to: LSSCTRLEAMRRSLQ*SACFCRVSGSTSGC
Trigger: ACAGCCAGATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp GCTGTGTTGGCTCCTCTTCAAGGTCATCAGGCTCCCAAACAAGAGTaGGCTCTGGCTTCTTCCCCACCTTCTGGAAGCTGTAGGATCGCA +
Preference number: 1 (lower is better)
Translates to: AVLAPLQGHQAPKQE*ALASSPPSGSCRIA
Trigger: TGCGATCCTACAGCTTCCAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGCCTGATGACCTTGAAGAGGAGCCAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 90 bp CTCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTGAGCTCCTaGACACGTTTGGAAGCCATGCGACGGTCATTGCAGTGGTCAGCT +
Preference number: 1 (lower is better)
Translates to: LSFTRTAKKRPMLSS*TRLEAMRRSLQWSA
Trigger: AGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 90 bp CAGGACTGCCTGGTGCACCTCCTCGACGCTGTGCTCTGGAGAAATTaGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTTGGATTTTCGAT +
Preference number: 1 (lower is better)
Translates to: QDCLVHLLDAVLWRN*GKLFLRDLLSWIFD
Trigger: ATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp CCACTGGTGTTGCCATGTCTATCTTCTGAGTCGCTGTCATCAAACTaGGCCTCTATAATGACATCAGGACCACTCCAGCCTTTCCGGGAC +
Preference number: 1 (lower is better)
Translates to: PLVLPCLSSESLSSN*ASIMTSGPLQPFRD
Trigger: GTCCCGGAAAGGCTGGAGTGGTCCTGATGTCATTATAGAGGCTCAGTTTGATGACAGCGACTCAGAAGATAGACATGGCAACACCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 90 bp AGGAACTGTGTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTaGCATAGTGGGTGTTCCCATATAGAACCTGGCAGTCTAAGCCAG +
Preference number: 1 (lower is better)
Translates to: RNCVKGRCIRKVENH*HSGCSHIEPGSLSQ
Trigger: CTGGCTTAGACTGCCAGGTTCTATATGGGAACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAACACAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp AGGCGAGGGCATCATCAAGGTCGCGAGCAGTTGATGGATCAATGGTaGAGATACAGTCTTTCCTTAGGTCTCTTCTCTTGCCCACCTCAT +
Preference number: 1 (lower is better)
Translates to: RRGHHQGREQLMDQW*RYSLSLGLFSCPPH
Trigger: ATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACTGTATCTTCACCATTGATCCATCAACTGCTCGCGACCTTGATGATGCCCTCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 90 bp CTCTGGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTTaGATTTTCGATCATGCTCTGGGCATGGTCGTAGCTCAGTTTGGT +
Preference number: 1 (lower is better)
Translates to: LWRNWGKLFLRDLLS*IFDHALGMVVAQFG
Trigger: ACCAAACTGAGCTACGACCATGCCCAGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp CTTAACACCATCAACCAGGCCACTGGTGTTGCCATGTCTATCTTCTaGGTCGCTGTCATCAAACTGAGCCTCTATAATGACATCAGGACC +
Preference number: 1 (lower is better)
Translates to: LNTINQATGVAMSIF*VAVIKLSLYNDIRT
Trigger: GGTCCTGATGTCATTATAGAGGCTCAGTTTGATGACAGCGACTCAGAAGATAGACATGGCAACACCAGTGGCCTGGTTGATGGTGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp TGGGATTGTCCAGGGCAGGCTTTGAGGGAGACATTCAAGAACTTCTaGAGAGAAATCAGAGAAGTCCACACCATATTCTGTCAGTATCCC +
Preference number: 1 (lower is better)
Translates to: WDCPGQALRETFKNF*REIREVHTIFCQYP
Trigger: GGGATACTGACAGAATATGGTGTGGACTTCTCTGATTTCTCTTCAGAAGTTCTTGAATGTCTCCCTCAAAGCCTGCCCTGGACAATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp GGGACAGTCCTTGAGAGGTACGTAAATTCTAGGTACTCGGTGGTCTaGAGGAGAAAACAGGGCGTATTTCTTAAACAGGTCACTGTTCTT +
Preference number: 1 (lower is better)
Translates to: GTVLERYVNSRYSVV*RRKQGVFLKQVTVL
Trigger: AAGAACAGTGACCTGTTTAAGAAATACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAATTTACGTACCTCTCAAGGACTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 90 bp AACTGGAGTACTAGAATCTTCTTTTCCTCTGTCAGGAGTAGAGATTaGCAATTTCTTAACACCATCAACCAGGCCACTGGTGTTGCCATG +
Preference number: 1 (lower is better)
Translates to: NWSTRIFFSSVRSRD*QFLNTINQATGVAM
Trigger: CATGGCAACACCAGTGGCCTGGTTGATGGTGTTAAGAAATTGTCAATCTCTACTCCTGACAGAGGAAAAGAAGATTCTAGTACTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGCAGCATCCCCTGCCCTaGCCCCTAACCTTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGQHPLP*PLTFQF
Trigger: GAACTGGAAGGTTAGGGGTCAGGGCAGGGGATGCTG...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR-3UTR TCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCAGCATCCCCTGCCCTaGCCCCTAACCTTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRQHPLP*PLTFQF
Trigger: GAACTGGAAGGTTAGGGGTCAGGGCAGGGGATGCTG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR-3UTR CCA 90 bp GCAGCCAGGAGGCGGTGCACTATGACGTCAGCAAAGCGGCGGATGGGAGAGGTGGAAGCCTGGGAAGCATaGGGACCACCTTCTGGACCA +
Preference number: 2 (lower is better)
Translates to: AARRRCTMTSAKRRMGEVEAWEA*GPPSGP
Trigger: TGGTCCAGAAGGTGGTCCCCATGCTTCCCAGGCTTC...CACCTCTCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp GCAGCCAGGAGGCGGTGCACTATGACGTCAGCAAAGCGGCGGATGGGAGAGGTGACAGTGCCATCTGCATaGGCCGGGAGTACATGTTGG +
Preference number: 2 (lower is better)
Translates to: AARRRCTMTSAKRRMGEVTVPSA*AGSTCW
Trigger: CCAACATGTACTCCCGGCCCATGCAGATGGCACTGT...CACCTCTCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp CTCCACCAGGTCACTGAGCATCTTCGTCTGTGGTGGGGGATGCCGGCGCAGCAGGTGCTCTGGAGAAATTaGGGGAAGCTCTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: LHQVTEHLRLWWGMPAQQVLWRN*GKLFLR
Trigger: CCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCAC...CTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp CTAAACGGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTGCTTaGCAATGCTGTGCAGGTTCAGGACTGCCTGGTGCACCTCCTCGA +
Preference number: 2 (lower is better)
Translates to: LNGVRHLQSAGGGVA*QCCAGSGLPGAPPR
Trigger: TCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCGTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp GCCTGCTCAGGGAAGGTGCGGAAGATCTTGTGGGCCACCGCCATGTaGGCCAGGAGCATGAACTCCTCTACAAGCTTGTTGCTGTCTCGG +
Preference number: 2 (lower is better)
Translates to: ACSGKVRKILWATAM*ARSMNSSTSLLLSR
Trigger: CCGAGACAGCAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCTTCCGCACCTTCCCTGAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp GGAAGCTGTAGGATCGCAGGGCCAGTGCATTGCAGTAGATGCGCTTCTGCACCCCCTCACACAGAAGCCTaGGAAGCATGGGGACCACCT +
Preference number: 2 (lower is better)
Translates to: GSCRIAGPVHCSRCASAPPHTEA*EAWGPP
Trigger: AGGTGGTCCCCATGCTTCCCAGGCTTCTGTGTGAGG...GGGTGCAGAAGCGCATCTACTGCAATGCACTGGCCCTGCGATCCTACAGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp ACCTGGCAGTCTAAGCCAGGGCTTGGTGGAATCCCACAGGGGAACCTATGGTGCCGGGTCATGAAGTCCTaGGGACAGTCCTTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: TWQSKPGLGGIPQGNLWCRVMKS*GQSLRG
Trigger: ACCTCTCAAGGACTGTCCCCAGGACTTCATGACCCG...GCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCCTGGCTTAGACTGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp CTCCTGCACACGTTTGGAAGCCATGCGACGGTCATTGCAGTGGTCAGCTTGCTTTGCCGGAACTGCTCCTaGTCCTGCAGCATCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LLHTFGSHATVIAVVSLLCRNCS*SCSIPE
Trigger: CTCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCA...AAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp CCGATGCTGAGCTCCTGCACACGTTTGGAAGCCATGCGACGGTCATaGCAGTGGTCAGCTTGCTTCTGTAGGGTATCAGGCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: PMLSSCTRLEAMRRS*QWSACFCRVSGSTS
Trigger: AGATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp GGCTTAGGGACACAGCAGGGGACTGACCTGCTGTGTTGGCTCCTCTTCAAGGTCCCAGGCCACTGGTGTTaGCATGTCTATCTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: GLGTQQGTDLLCWLLFKVPGHWC*HVYLLS
Trigger: ACTCAGAAGATAGACATGGCAACACCAGTGGCCTGG...GACCTTGAAGAGGAGCCAACACAGCAGGTCAGTCCCCTGCTGTGTCCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp TGTGTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTGCCATAGTGGGTGTGTGCAGGTTCAGGACTaGCTGGTGCACCTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: CVKGRCIRKVENHCHSGCVQVQD*LVHLLD
Trigger: GTCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCAC...ACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp ACCTGGCAGTCTAAGCCAGGGCTTGGTGGAATCCCACAGGGGAACCTATGGTGCGGAGTTGCTTTGCAATaGTGTGCAGGTTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: TWQSKPGLGGIPQGNLWCGVALQ*CAGSGL
Trigger: CAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCC...GCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCCTGGCTTAGACTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp TGTGTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTGCCATAGTGGGTGTGTGCGGAAGATCTTGTaGGCCACCGCCATGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CVKGRCIRKVENHCHSGCVRKIL*ATAMLA
Trigger: GGCCAACATGGCGGTGGCCCACAAGATCTTCCGCAC...ACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp TCAGGACTGCCTGGTGCACCTCCTCGACGCTGTGCTCTGGAGAAATaGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTTGGATTTTCGA +
Preference number: 2 (lower is better)
Translates to: SGLPGAPPRRCALEK*GEALPQGSSQLDFR
Trigger: TCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp GTTGGCTCCTCTTCAAGGTCATCAGGCTCCCAAACAAGAGTGAGCTCTGGCTTCAACTGCTCCTGGTCCTaGAGCATCCCAGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: VGSSSRSSGSQTRVSSGFNCSWS*SIPEQK
Trigger: CTTCTGCTCTGGGATGCTGCAGGACCAGGAGCAGTT...GAAGCCAGAGCTCACTCTTGTTTGGGAGCCTGATGACCTTGAAGAGGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp ACCTGGCAGTCTAAGCCAGGGCTTGGTGGAATCCCACAGGGGAACCTATGGTGCATTCTAGGTACTCGGTaGTCTGAAGGAGAAAACAGG +
Preference number: 2 (lower is better)
Translates to: TWQSKPGLGGIPQGNLWCILGTR*SEGENR
Trigger: CCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAAT...GCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCCTGGCTTAGACTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp TTACAGTCCTCCTTCCAGTCTATGATGCGGCAGATGAACAGCGTGTaGGCAAAGTCTTTAGGTCGGGTCATGAAGTCCTGGGGACAGTCC +
Preference number: 2 (lower is better)
Translates to: LQSSFQSMMRQMNSV*AKSLGRVMKSWGQS
Trigger: GGACTGTCCCCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGTTCATCTGCCGCATCATAGACTGGAAGGAGGACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR TCA 90 bp CATGGGGACCACCTTCTGGACCAAGTAGACACTTGTGGCTCTCTCAGCAGCTACAAGGTCGCGAGCAGTTaGTGGATCAATGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: HGDHLLDQVDTCGSLSSYKVASS*WINGED
Trigger: ATCTTCACCATTGATCCATCAACTGCTCGCGACCTT...GTAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCCAGAAGGTGGTCCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp GGAAGCTGTAGGATCGCAGGGCCAGTGCATTGCAGTAGATGCGCTTCTGCACCCTTTCAGGATGCCAGTTaGTGCTCGAGAATGCTTTTT +
Preference number: 2 (lower is better)
Translates to: GSCRIAGPVHCSRCASAPFQDAS*CSRMLF
Trigger: AAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAA...GGGTGCAGAAGCGCATCTACTGCAATGCACTGGCCCTGCGATCCTACAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp CTTTCCTTAGGTCTCTTCTCTTGCCCACCTCATCAGGTGGGATTGTCCAGGGCATCGATTTCACCAGCCTaGCCAAGACTCTTAGCCAGT +
Preference number: 2 (lower is better)
Translates to: LSLGLFSCPPHQVGLSRASISPA*PRLLAS
Trigger: ACTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATCGA...TGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp CTGTGTTGGCTCCTCTTCAAGGTCATCAGGCTCCCAAACAAGAGTGAGCTCTGGTTAGGTCTCTTCTCTTaGCCACCTCATCAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LCWLLFKVIRLPNKSELWLGLFS*PPHQVG
Trigger: TCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAA...CCAGAGCTCACTCTTGTTTGGGAGCCTGATGACCTTGAAGAGGAGCCAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp AGGGTCGCTGCATCAGGAAGGTTGAGAACCACTGCCATAGTGGGTGTTCCCATAACTCTTCAAGGATCTTaGCTTCAGGGGTCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: RVAASGRLRTTAIVGVPITLQGS*LQGSAS
Trigger: GGAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGT...TATGGGAACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp GCTCTGGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTaGGATTTTCGATCATGCTCTGGGCATGGTCGTAGCTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: ALEKLGEALPQGSSQ*DFRSCSGHGRSSVW
Trigger: CCAAACTGAGCTACGACCATGCCCAGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR TCA 90 bp GGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTGCTTTGCAATGCTGTGCAGTCAGGAGTAGAGATTaGCAATTTCTTAACACCATC +
Preference number: 2 (lower is better)
Translates to: GVRHLQSAGGGVALQCCAVRSRD*QFLNTI
Trigger: GATGGTGTTAAGAAATTGTCAATCTCTACTCCTGAC...TGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp GACTCCAGGGGGCCACTCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTGAGAGGAACTGGTCACTaGTTAGGTTTTTCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: DSRGPLSFTRTAKKRPMLRGTGH*LGFSSL
Trigger: AAGGGAAGAAAAACCTAACCAGTGACCAGTTCCTCT...CAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp AGTCTTTCCTTAGGTCTCTTCTCTTGCCCACCTCATCAGGTGGGATaGTCCAGGGCAGGCTTTGAGGGAGACATTCAAGAACTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SLSLGLFSCPPHQVG*SRAGFEGDIQELLK
Trigger: CTTCAGAAGTTCTTGAATGTCTCCCTCAAAGCCTGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 90 bp CTCTACAAGCTTGTTGCTGTCTCGGTACTCATAGATGTGACATCCTaGAGGCAGTCCAGTCTCATGGTCCAGAGTAAAAGCAAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: LYKLVAVSVLIDVTS*RQSSLMVQSKSKLQ
Trigger: CTGAAGCTTGCTTTTACTCTGGACCATGAGACTGGACTGCCTCAAGGATGTCACATCTATGAGTACCGAGACAGCAACAAGCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CCA 90 bp CTCGACGCTGTGCTCTGGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCATTAAGAAGAGGAACTaGTCACTGGTTAGGTTTTTC +
Preference number: 2 (lower is better)
Translates to: LDAVLWRNWGKLFLRDLLIKKRN*SLVRFF
Trigger: GAAAAACCTAACCAGTGACCAGTTCCTCTTCTTAAT...GAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR TCA 90 bp TTGCCCCAGGGCAAAATTACAGTCCTCCTTCCAGTCTATGATGCGGCAGATGAAACCTTTGCTGATTTCTaGAGTGACTTCTCTGATAAG +
Preference number: 2 (lower is better)
Translates to: LPQGKITVLLPVYDAADETFADF*SDFSDK
Trigger: CTTATCAGAGAAGTCACTTCAGAAATCAGCAAAGGT...TTCATCTGCCGCATCATAGACTGGAAGGAGGACTGTAATTTTGCCCTGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR GCA 90 bp GGAGAAAACAGGGCGTATTTCTTAAACAGGTCACTGTTCTTATCAGCCAAGAGTCAGGATGCCAGTTGCTaGTCGAGAATGCTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: GENRAYFLNRSLFLSAKSQDASC*SRMLFL
Trigger: GAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTG...ACTCTTGGCTGATAAGAACAGTGACCTGTTTAAGAAATACGCCCTGTTTTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp CGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTaGGATCCTCTCTGCTCAGGGAAGCACAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RLVEAGLPAQED*DPLCSGKHRPG
Trigger: GCCTGGCCTGTGCTTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR GCA 72 bp ACCAGGTCACTGAGCATCTTCGTCTGTGGTGGGGGATaGCGGCGCAGCAGGGCCTGCTCAGGGAAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: TRSLSIFVCGGG*RRSRACSGKVR
Trigger: CCGCACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp CGGCGATGTGGACGCCCACTTCGAAGGTGCCATCAGTaGGCCGCCTGCAGGCGAGGGCATCATCAAGGTCGC +
Preference number: 3 (lower is better)
Translates to: RRCGRPLRRCHQ*AACRRGHHQGR
Trigger: GCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGGCACCTTCGAAGTGGGCGTCCACATCGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp CTCCACCAGGTCACTGAGCATCTTCGTCTGTGGTGGGGGATGCCGGCGCAGCAGCTTAGGTCTCTTCTCTaGCCCACCTCATCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: LHQVTEHLRLWWGMPAQQLRSLL*PTSSGG
Trigger: CCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAG...CTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp GGACCACTCCAGCCTTTCCGGGACTGCTGCAGGGGGTaGTGTCCACAGCCCTCTTCAGGGATGTCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: GPLQPFRDCCRG*CPQPSSGMSAS
Trigger: TGAAGCTGACATCCCTGAAGAGGGCTGTGGACATCACCCCCTGCAGCAGTCCCGGAAAGGCTGGAGTGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp CGGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTaGTTTGCAATGCTGTGCAGGTTCAGGACTGCCTGG +
Preference number: 3 (lower is better)
Translates to: RSAPSTKRWRRS*FAMLCRFRTAW
Trigger: CCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp AGGTTCAGGACTGCCTGGTGCACCTCCTCGACGCTGTaGTCTGGAGAAATTGGGGGAAGCTCTTCCTCAGGG +
Preference number: 3 (lower is better)
Translates to: RFRTAWCTSSTL*SGEIGGSSSSG
Trigger: CCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp CCAGGGCTTGGTGGAATCCCACAGGGGAACCTATGGTaGTGGGGAGAAATGAGGGCAGATGAGGACCTAGGG +
Preference number: 3 (lower is better)
Translates to: PGLGGIPQGNLW*WGEMRADEDLG
Trigger: CCCTAGGTCCTCATCTGCCCTCATTTCTCCCCAGCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp GGGCTTGGTGGAATCCCACAGGGGAACCTATGGTGCTaGGGAGAAATGAGGGCAGATGAGGACCTAGGGGCA +
Preference number: 3 (lower is better)
Translates to: GLGGIPQGNLWC*GEMRADEDLGA
Trigger: TGCCCCTAGGTCCTCATCTGCCCTCATTTCTCCCCAGCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp CTCCTGCACACGTTTGGAAGCCATGCGACGGTCATTGCAGTGGTCAGCTTGCTTTGGGCCACCGCCATGTaGGCCAGGAGCATGAACTCC +
Preference number: 3 (lower is better)
Translates to: LLHTFGSHATVIAVVSLLWATAM*ARSMNS
Trigger: GGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCA...AAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp CATCTACAAAGCGCTGGCGGCGGAGTTGCTTTGCAATaGTGTGCAGGTTCAGGACTGCCTGGTGCACCTCCT +
Preference number: 3 (lower is better)
Translates to: HLQSAGGGVALQ*CAGSGLPGAPP
Trigger: AGGAGGTGCACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp CAGGACTGCCTGGTGCACCTCCTCGACGCTGTGCTCTaGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTT +
Preference number: 3 (lower is better)
Translates to: QDCLVHLLDAVL*RNWGKLFLRDL
Trigger: AAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp ACCTGGCAGTCTAAGCCAGGGCTTGGTGGAATCCCACAGGGGAACCTATGGTGCTTGTCAGTCATGGGGTaGAGGCTGCAGAGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: TWQSKPGLGGIPQGNLWCLSVMG*RLQSSS
Trigger: TGAGGAACTCTGCAGCCTCAACCCCATGACTGACAA...GCACCATAGGTTCCCCTGTGGGATTCCACCAAGCCCTGGCTTAGACTGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GGCTTAGGGACACAGCAGGGGACTGACCTGCTGTGTTGGCTCCTCTTCAAGGTCACAGAGAAGGTCAGCTaGTCAGTCATGGGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: GLGTQQGTDLLCWLLFKVTEKVS*SVMGLR
Trigger: CCTCAACCCCATGACTGACAAGCTGACCTTCTCTGT...GACCTTGAAGAGGAGCCAACACAGCAGGTCAGTCCCCTGCTGTGTCCCTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GGCTTAGGGACACAGCAGGGGACTGACCTGCTGTGTTGGCTCCTCTTCAAGGTCCACTCTTCAAGGATCTaGCCTTCAGGGGTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: GLGTQQGTDLLCWLLFKVHSSRI*PSGVSF
Trigger: GAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGTG...GACCTTGAAGAGGAGCCAACACAGCAGGTCAGTCCCCTGCTGTGTCCCTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp GAAATGAGGGCAGATGAGGACCTAGGGGCACACGTTTaGGACAGAGGTAGGCTTAGGGACACAGCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: EMRADEDLGAHV*DRGRLRDTAGD
Trigger: GTCCCCTGCTGTGTCCCTAAGCCTACCTCTGTCTCAAACGTGTGCCCCTAGGTCCTCATCTGCCCTCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp TGCTTTGCAATGCTGTGCAGGTTCAGGACTGCCTGGTaGACCTCCTCGACGCTGTGCTCTGGAGAAATTGGG +
Preference number: 3 (lower is better)
Translates to: CFAMLCRFRTAW*TSSTLCSGEIG
Trigger: CCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GACTCCAGGGGGCCACTCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTGTGTCCAGGGCAGGCTTaGAGGGAGACATTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: DSRGPLSFTRTAKKRPMLCPGQA*RETFKN
Trigger: GTTCTTGAATGTCTCCCTCAAAGCCTGCCCTGGACA...CAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GACTCCAGGGGGCCACTCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTGGGACCAAGTAGACACTaGTGGCTCTCTCAGCAGCTA +
Preference number: 3 (lower is better)
Translates to: DSRGPLSFTRTAKKRPMLGPSRH*WLSQQL
Trigger: TAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCC...CAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp ACTAGAACTGCGAAGAAGAGGCCGATGCTGAGCTCCTaGACACGTTTGGAAGCCATGCGACGGTCATTGCAG +
Preference number: 3 (lower is better)
Translates to: TRTAKKRPMLSS*TRLEAMRRSLQ
Trigger: CTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp CTCCTGCACACGTTTGGAAGCCATGCGACGGTCATTGCAGTGGTCAGCTTGCTTACCAGGCCACTGGTGTaGCCATGTCTATCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: LLHTFGSHATVIAVVSLLTRPLV*PCLSSE
Trigger: CTCAGAAGATAGACATGGCAACACCAGTGGCCTGGT...AAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GGAAGCTGTAGGATCGCAGGGCCAGTGCATTGCAGTAGATGCGCTTCTGCACCCGTTTCAGGATGCCAGTaGCTGCTCGAGAATGCTTTT +
Preference number: 3 (lower is better)
Translates to: GSCRIAGPVHCSRCASAPVSGCQ*LLENAF
Trigger: AAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAAC...GGGTGCAGAAGCGCATCTACTGCAATGCACTGGCCCTGCGATCCTACAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp AGATCTTGTGGGCCACCGCCATGTTGGCCAGGAGCATaGACTCCTCTACAAGCTTGTTGCTGTCTCGGTACT +
Preference number: 3 (lower is better)
Translates to: RSCGPPPCWPGA*TPLQACCCLGT
Trigger: AGTACCGAGACAGCAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp TCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTaGGCTCCTGCACACGTTTGGAAGCCATGCGACGGT +
Preference number: 3 (lower is better)
Translates to: SPLLELRRRGRC*APAHVWKPCDG
Trigger: ACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp TTGGAAGCCATGCGACGGTCATTGCAGTGGTCAGCTTaGTTCTGTAGGGTATCAGGCTCCACATCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: LEAMRRSLQWSA*FCRVSGSTSGC
Trigger: ACAGCCAGATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp TCGAAGGTGCCATCAGTGAGCCGCCTGCAGGCGAGGGCATCATCAAGGTCGCGATCTATTTCTTTGTCATaGCTCTCTGGTTTAACTGCC +
Preference number: 3 (lower is better)
Translates to: SKVPSVSRLQARASSRSRSISLS*LSGLTA
Trigger: GGCAGTTAAACCAGAGAGCAATGACAAAGAAATAGA...TCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGGCACCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp GGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTGCTTTGCAATGCTGTGCACAGGGATCTTCTCAGTaGGATTTTCGATCATGCTCT +
Preference number: 3 (lower is better)
Translates to: GVRHLQSAGGGVALQCCAQGSSQ*DFRSCS
Trigger: AGAGCATGATCGAAAATCCAACTGAGAAGATCCCTG...TGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp TGTGTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTGCCATAGTGGGTGTTCTCTGATAAGCCTCTaGTGTCCTGTGGTATGGGGG +
Preference number: 3 (lower is better)
Translates to: CVKGRCIRKVENHCHSGCSLISL*CPVVWG
Trigger: CCCCCATACCACAGGACACAAGAGGCTTATCAGAGA...ACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR-3UTR CAA 90 bp TGTGTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTGCCATAGTGGGTGTCAGATGAACAGCGTGTaGGCAAAGTCTTTAGGTCGG +
Preference number: 3 (lower is better)
Translates to: CVKGRCIRKVENHCHSGCQMNSV*AKSLGR
Trigger: CCGACCTAAAGACTTTGCCAACACGCTGTTCATCTG...ACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp GTTAAGGGTCGCTGCATCAGGAAGGTTGAGAACCACTaGCATAGTGGGTGTTCCCATATAGAACCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: VKGRCIRKVENH*HSGCSHIEPGS
Trigger: ACTGCCAGGTTCTATATGGGAACACCCACTATGGCAGTGGTTCTCAACCTTCCTGATGCAGCGACCCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp GCATGGGGACCACCTTCTGGACCAAGTAGACACTTGTaGCTCTCTCAGCAGCTACTTTATCCAAAGAGGATC +
Preference number: 3 (lower is better)
Translates to: AWGPPSGPSRHL*LSQQLLYPKRI
Trigger: GATCCTCTTTGGATAAAGTAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCCAGAAGGTGGTCCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR GCA 72 bp CTTCCTCAGGGATCTTCTCAGTTGGATTTTCGATCATaGTCTGGGCATGGTCGTAGCTCAGTTTGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: LPQGSSQLDFRS*SGHGRSSVWCK
Trigger: CTTGCACCAAACTGAGCTACGACCATGCCCAGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp AATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTTaGATTTTCGATCATGCTCTGGGCATGGTCGTAGCT +
Preference number: 3 (lower is better)
Translates to: NWGKLFLRDLLS*IFDHALGMVVA
Trigger: AGCTACGACCATGCCCAGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp ATCAACCAGGCCACTGGTGTTGCCATGTCTATCTTCTaGGTCGCTGTCATCAAACTGAGCCTCTATAATGAC +
Preference number: 3 (lower is better)
Translates to: INQATGVAMSIF*VAVIKLSLYND
Trigger: GTCATTATAGAGGCTCAGTTTGATGACAGCGACTCAGAAGATAGACATGGCAACACCAGTGGCCTGGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp CTTGAGAGGTACGTAAATTCTAGGTACTCGGTGGTCTaGAGGAGAAAACAGGGCGTATTTCTTAAACAGGTC +
Preference number: 3 (lower is better)
Translates to: LERYVNSRYSVV*RRKQGVFLKQV
Trigger: GACCTGTTTAAGAAATACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAATTTACGTACCTCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CCA 72 bp GTCCTGTGGTATGGGGGTGTTCTCATCTTTCATAACTaGAGTACTAGAATCTTCTTTTCCTCTGTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: VLWYGGVLIFHN*STRIFFSSVRS
Trigger: ACTCCTGACAGAGGAAAAGAAGATTCTAGTACTCCAGTTATGAAAGATGAGAACACCCCCATACCACAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR TCA 72 bp ACTAGAATCTTCTTTTCCTCTGTCAGGAGTAGAGATTaGCAATTTCTTAACACCATCAACCAGGCCACTGGT +
Preference number: 3 (lower is better)
Translates to: TRIFFSSVRSRD*QFLNTINQATG
Trigger: ACCAGTGGCCTGGTTGATGGTGTTAAGAAATTGTCAATCTCTACTCCTGACAGAGGAAAAGAAGATTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGTCTGTGGTGGGGGATaGCGGCGCAGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLVCGGG*RRSRAC
Trigger: GCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGAC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTCTGTGGTGGGGGATaGCGGCGCAGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRVCGGG*RRSRAC
Trigger: GCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGAC...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGGGCCCCTGCAGAGCTaGCATCCATGGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGGPLQS*HPWAAP
Trigger: TGGGGCTGCCCATGGATGTCAGCTCTGCAGGGGCCC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGCTGTGGCCTCTGCCTaGAGGACCACATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLAVASA*RTTSTR
Trigger: CCTGGTGGATGTGGTCCTGCAGGCAGAGGCCACAGC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGGGCCCCTGCAGAGCTaGCATCCATGGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREGPLQS*HPWAAP
Trigger: TGGGGCTGCCCATGGATGTCAGCTCTGCAGGGGCCC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGGAGTACATGTTGGTaGGCACCTCCTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLGSTCW*APPSGP
Trigger: TGGCCCGGAAGGAGGTGCTCACCAACATGTACTCCC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGTGCGGAAGATCTTGTaGGCCACCGCCATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLVRKIL*ATAMLA
Trigger: GGCCAACATGGCGGTGGCCCACAAGATCTTCCGCAC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGGAGGCGGTGCACTATaGCGTCAGCAAAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGGGGAL*RQQSGG
Trigger: TCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGAGGCGGTGCACTATaGCGTCAGCAAAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRGGGAL*RQQSGG
Trigger: TCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCC...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGCAGCCAGGAGGCGGTaGACTATGACGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLAARRR*TMTSAK
Trigger: CTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCAGAGGACACACCTCTaGGGGTCCCCGGAGACCGAA +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRQRTHL*GSPETE
Trigger: TTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGAAGCCTGGGAAGCATaGGGACCACCTTCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLEAWEA*GPPSGP
Trigger: TGGTCCAGAAGGTGGTCCCCATGCTTCCCAGGCTTC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCCTCACACAGAAGCCTaGGAAGCATGGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLPHTEA*EAWGPP
Trigger: AGGTGGTCCCCATGCTTCCCAGGCTTCTGTGTGAGG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGATGGGCAGCCCCATCTaGTCACAGAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLMGSPI*SQNSTR
Trigger: CCTGGTGGAGTTCTGTGACCAGATGGGGCTGCCCAT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGGGAGTACATGTTGGTaGGCACCTCCTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGGSTCW*APPSGP
Trigger: TGGCCCGGAAGGAGGTGCTCACCAACATGTACTCCC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTTCAGGACTGCCTGGTaGACCTCCTCGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRFRTAW*TSSTLC
Trigger: GCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGCGGCGGAGTTGCTTTaGAATGCTGTGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLAAELL*NAVQVQ
Trigger: CTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAGAGCAGAAGTACAGTaGCATCTGCATGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLRAEVQ*HLHGPG
Trigger: TCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAACTGCTCCTGGTCCTaGAGCATCCCAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLNCSWS*SIPEQK
Trigger: CTTCTGCTCTGGGATGCTGCAGGACCAGGAGCAGTT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGCTGTGGCCTCTGCCTaGAGGACCACATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREAVASA*RTTSTR
Trigger: CCTGGTGGATGTGGTCCTGCAGGCAGAGGCCACAGC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACAGAGGACACACCTCTaGGGGTCCCCGGAGACCGAA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREQRTHL*GSPETE
Trigger: TTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGACAGTGCCATCTGCATaGGCCGGGAGTACATGTTGG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLTVPSA*AGSTCW
Trigger: CCAACATGTACTCCCGGCCCATGCAGATGGCACTGT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTGCCGGAACTGCTCCTaGTCCTGCAGCATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRCRNCS*SCSIPE
Trigger: CTCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTGCCGGAACTGCTCCTaGTCCTGCAGCATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGCRNCS*SCSIPE
Trigger: CTCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTCAGGACTGCCTGGTaGACCTCCTCGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREFRTAW*TSSTLC
Trigger: GCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGTGCAGGTTCAGGACTaGCTGGTGCACCTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREVQVQD*LVHLLD
Trigger: GTCGAGGAGGTGCACCAGGCAGTCCTGAACCTGCAC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTGCTTTGCAATGCTGTaGAGGTTCAGGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLCFAML*RFRTAW
Trigger: CCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCCATGCGACGGTCATTaGAGTGGTCAGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLPCDGH*SGQLAS
Trigger: AGAAGCAAGCTGACCACTGCAATGACCGTCGCATGG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGTGCATTGCAGTAGATaGGCTTCTGCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLVHCSR*ASAPQS
Trigger: GCTTTGGGGTGCAGAAGCGCATCTACTGCAATGCAC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGAAGCCTGGGAAGCATaGGGACCACCTTCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGEAWEA*GPPSGP
Trigger: TGGTCCAGAAGGTGGTCCCCATGCTTCCCAGGCTTC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGTGCGGAAGATCTTGTaGGCCACCGCCATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREVRKIL*ATAMLA
Trigger: GGCCAACATGGCGGTGGCCCACAAGATCTTCCGCAC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTGTCAGTCATGGGGTTaGGGCTGCAGAGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRCQSWG*GCRVPH
Trigger: GTGAGGAACTCTGCAGCCTCAACCCCATGACTGACA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGGCGGATGGGAGAGGTaGAGTGTGTGTAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREGGWER*SVCRGE
Trigger: TTCCCCTCTACACACACTTCACCTCTCCCATCCGCC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGCTCCCAAACAAGAGTaGGCTCTGGCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGAPKQE*ALASSP
Trigger: TGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGCTCCCAAACAAGAGTaGGCTCTGGCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRAPKQE*ALASSP
Trigger: TGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGC...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTCGATTTCACCAGCCTaGCCAAGACTCTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLSISPA*PRLLAS
Trigger: ACTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATCGA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGAGTTGCTTTGCAATaGTGTGCAGGTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLGVALQ*CAGSGL
Trigger: CAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTTGCAGTGGTCAGCTTaGTTCTGTAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLLQWSA*FCRVSG
Trigger: GCCTGATACCCTACAGAAGCAAGCTGACCACTGCAA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCCGATGCTGAGCTCCTaGACACGTTTGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRPMLSS*TRLEAM
Trigger: CATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGCAGTCCAGTCTCATaGTCCAGAGTAAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLGSPVS*SRVKAS
Trigger: GCTTGCTTTTACTCTGGACCATGAGACTGGACTGCC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAATGGGCAGCCCCATCTaGTCACAGAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREMGSPI*SQNSTR
Trigger: CCTGGTGGAGTTCTGTGACCAGATGGGGCTGCCCAT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAACAAGAGTGAGCTCTaGCTTCTTCCCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLNKSEL*LLPHLL
Trigger: CAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAGGTACTCGGTGGTCTaGAGGAGAAAACAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGRYSVV*RRKQGV
Trigger: TACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCT...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATGTCAGTCATGGGGTTaGGGCTGCAGAGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRECQSWG*GCRVPH
Trigger: GTGAGGAACTCTGCAGCCTCAACCCCATGACTGACA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGATCCTTGGCTTCCACTaGTCCTCAGGAAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLILGFH*SSGSSF
Trigger: AAAACTGCTTCCTGAGGATCAGTGGAAGCCAAGGAT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGCGGCGGAGTTGCTTTaGAATGCTGTGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREAAELL*NAVQVQ
Trigger: CTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAGAGCAGAAGTACAGTaGCATCTGCATGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRERAEVQ*HLHGPG
Trigger: TCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCCATGCGACGGTCATTaGAGTGGTCAGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRPCDGH*SGQLAS
Trigger: AGAAGCAAGCTGACCACTGCAATGACCGTCGCATGG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACCGATGCTGAGCTCCTaGACACGTTTGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREPMLSS*TRLEAM
Trigger: CATGGCTTCCAAACGTGTGCAGGAGCTCAGCATCGG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGTGCATTGCAGTAGATaGGCTTCTGCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGVHCSR*ASAPQS
Trigger: GCTTTGGGGTGCAGAAGCGCATCTACTGCAATGCAC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAAGATGGTGATGACCTaGTGTGTTGGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLKMVMT*CVGSSS
Trigger: TGAAGAGGAGCCAACACAGCAGGTCATCACCATCTT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACGGGTCATGAAGTCCTaGGGACAGTCCTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRERVMKS*GQSLRG
Trigger: ACCTCTCAAGGACTGTCCCCAGGACTTCATGACCCG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAACAGTGCCATCTGCATaGGCCGGGAGTACATGTTGG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRETVPSA*AGSTCW
Trigger: CCAACATGTACTCCCGGCCCATGCAGATGGCACTGT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCATGGACTTGTTCTTTaGCTTTTTGTCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLHGLVL*LFVTWR
Trigger: TCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAGGTACTCGGTGGTCTaGAGGAGAAAACAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRERYSVV*RRKQGV
Trigger: TACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCCAGGCCACTGGTGTTaGCATGTCTATCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRPGHWC*HVYLLS
Trigger: ACTCAGAAGATAGACATGGCAACACCAGTGGCCTGG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTCGATTTCACCAGCCTaGCCAAGACTCTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGSISPA*PRLLAS
Trigger: ACTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATCGA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTTAGGTCTCTTCTCTTaGCCACCTCATCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRLGLFS*PPHQVG
Trigger: TCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGACTCTTCAAGGATCTTaGCTTCAGGGGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGTLQGS*LQGSAS
Trigger: GGAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGT...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGACTCTTCAAGGATCTTaGCTTCAGGGGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRTLQGS*LQGSAS
Trigger: GGAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGT...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGAGTTGCTTTGCAATaGTGTGCAGGTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRGVALQ*CAGSGL
Trigger: CAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCC...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAAGTACAGTGCCATCTaGATGGGCCGGGAGTACATG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREKYSAI*MGREYM
Trigger: CATGTACTCCCGGCCCATGCAGATGGCACTGTACTT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGTGCTCTGGAGAAATTaGGGGAAGCTCTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREVLWRN*GKLFLR
Trigger: CCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCAC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGATGACCTGCTGTGTTaGCTCCTCTTCAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGDDLLC*LLFKVI
Trigger: GATGACCTTGAAGAGGAGCCAACACAGCAGGTCATC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR CAA 72 bp GTGCGCCATCTACAAAGCGCTGGCGGCGGAGTTGCTTaGCAATGCTGTGCAGGTTCAGGACTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VRHLQSAGGGVA*QCCAGSGLPGA
Trigger: TGCACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp ACGGAGTGCGCCATCTACAAAGCGCTGGCGGCGGAGTaGCTTTGCAATGCTGTGCAGGTTCAGGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: TECAIYKALAAE*LCNAVQVQDCL
Trigger: CAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGAAACTTCTTTGGGTTaGTTCTCAATACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLETSLG*FSIHPG
Trigger: TCCAGGGTGTATTGAGAATCAACCCAAAGAAGTTTC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGGTCGCGAGCAGTTaGTGGATCAATGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGKVASS*WINGED
Trigger: ATCTTCACCATTGATCCATCAACTGCTCGCGACCTT...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGCAGGATGCCAGTTGCTaGTCGAGAATGCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGQDASC*SRMLFL
Trigger: GAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTG...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTAGGTCTCTTCTCTTaGCCACCTCATCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELGLFS*PPHQVG
Trigger: TCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTGCAGTGGTCAGCTTaGTTCTGTAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELQWSA*FCRVSG
Trigger: GCCTGATACCCTACAGAAGCAAGCTGACCACTGCAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGAAGATGGTGATGACCTaGTGTGTTGGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRKMVMT*CVGSSS
Trigger: TGAAGAGGAGCCAACACAGCAGGTCATCACCATCTT...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GCGGCCAAACCACTCTTCAAGGATCTTGCCTTCAGGGGTCAGCTTCCAGATCACCAGAGGACACACCTCTaGGGGTCCCCGGAGACCGAA +
Preference number: 4 (lower is better)
Translates to: AAKPLFKDLAFRGQLPDHQRTHL*GSPETE
Trigger: TTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTG...GTGATCTGGAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGTGGTTTGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGGCAGTCCAGTCTCATaGTCCAGAGTAAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREGSPVS*SRVKAS
Trigger: GCTTGCTTTTACTCTGGACCATGAGACTGGACTGCC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGATGACCTGCTGTGTTaGCTCCTCTTCAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREDDLLC*LLFKVI
Trigger: GATGACCTTGAAGAGGAGCCAACACAGCAGGTCATC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGCATGGACTTGTTCTTTaGCTTTTTGTCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGHGLVL*LFVTWR
Trigger: TCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATG...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGTCAGGAGTAGAGATTaGCAATTTCTTAACACCATC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLVRSRD*QFLNTI
Trigger: GATGGTGTTAAGAAATTGTCAATCTCTACTCCTGAC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGACCTTTGCTGATTTCTaGAGTGACTTCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLTFADF*SDFSDK
Trigger: CTTATCAGAGAAGTCACTTCAGAAATCAGCAAAGGT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAAGGTCGCGAGCAGTTaGTGGATCAATGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREKVASS*WINGED
Trigger: ATCTTCACCATTGATCCATCAACTGCTCGCGACCTT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACAGGATGCCAGTTGCTaGTCGAGAATGCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREQDASC*SRMLFL
Trigger: GAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGAAACTTCTTTGGGTTaGTTCTCAATACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGETSLG*FSIHPG
Trigger: TCCAGGGTGTATTGAGAATCAACCCAAAGAAGTTTC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACATCCGGAGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREHPEKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCTCCGGATG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTAACTGCCTTCCACTaGTCCTCAGGAAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELTAFH*SSGSSF
Trigger: AAAACTGCTTCCTGAGGATCAGTGGAAGGCAGTTAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065694.8
CDS-3UTR GCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTTTCAGGATGCCAGTTaGTGCTCGAGAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRFQDAS*CSRMLF
Trigger: AAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTTTGTCATTGCTCTCTaGTTTAACTGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGFVIAL*FNCLPL
Trigger: CAGTGGAAGGCAGTTAAACCAGAGAGCAATGACAAA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065694.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAATTCTAGGTACTCGGTaGTCTGAAGGAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREILGTR*SEGENR
Trigger: CCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAAT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGAGGGATCTTCTCAGTTaGATTTTCGATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRRDLLS*IFDHAL
Trigger: CAGAGCATGATCGAAAATCCAACTGAGAAGATCCCT...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR CAA 72 bp GGGAAGGTGCGGAAGATCTTGTGGGCCACCGCCATGTaGGCCAGGAGCATGAACTCCTCTACAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GKVRKILWATAM*ARSMNSSTSLL
Trigger: CAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCTTCCGCACCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR TCA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGAATGAAGGCTTCATaGAACTTCTTTGGGTTGATT +
Preference number: 4 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRGMKAS*NFFGLI
Trigger: AATCAACCCAAAGAAGTTTCATGAAGCCTTCATTCC...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR GCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTTCAGGATGCCAGTTaGTGCTCGAGAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREFQDAS*CSRMLF
Trigger: AAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTTCATGAAACTTCTTTaGGTTGATTCTCAATACACC +
Preference number: 4 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLFMKLL*VDSQYT
Trigger: GGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAGGGATCTTCTCAGTTaGATTTTCGATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRERDLLS*IFDHAL
Trigger: CAGAGCATGATCGAAAATCCAACTGAGAAGATCCCT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
3UTR CAA 72 bp AGCTCCTGCACACGTTTGGAAGCCATGCGACGGTCATaGCAGTGGTCAGCTTGCTTCTGTAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: SSCTRLEAMRRS*QWSACFCRVSG
Trigger: GCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGTCAGGAGTAGAGATTaGCAATTTCTTAACACCATC +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLREVRSRD*QFLNTI
Trigger: GATGGTGTTAAGAAATTGTCAATCTCTACTCCTGAC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAACCTTTGCTGATTTCTaGAGTGACTTCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRETFADF*SDFSDK
Trigger: CTTATCAGAGAAGTCACTTCAGAAATCAGCAAAGGT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp GGATGCCGGCGCAGCAGGGCCTGCTCAGGGAAGGTGCGGAAGATCTTGTGGGCCTTCATGAAACTTCTTTaGGTTGATTCTCAATACACC +
Preference number: 4 (lower is better)
Translates to: GCRRSRACSGKVRKILWAFMKLL*VDSQYT
Trigger: GGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAA...GGCCCACAAGATCTTCCGCACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR TCA 90 bp CACTCCAGCCTTTCCGGGACTGCTGCAGGGGGTGATGTCCACAGCCCTCTTCAGGGAATGAAGGCTTCATaGAACTTCTTTGGGTTGATT +
Preference number: 4 (lower is better)
Translates to: HSSLSGTAAGGDVHSPLQGMKAS*NFFGLI
Trigger: AATCAACCCAAAGAAGTTTCATGAAGCCTTCATTCC...CTGAAGAGGGCTGTGGACATCACCCCCTGCAGCAGTCCCGGAAAGGCTGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CCA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAACTGAAACATCCTCCTTaGACATGTAGGTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELKHPP*TCRFQI
Trigger: TATTTGAAACCTACATGTCCAAGGAGGATGTTTCAG...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CCA 90 bp CTCCACCAGGTCACTGAGCATCTTCGTCTGTGGTGGGGGATGCCGGCGCAGCAGCTGAAACATCCTCCTTaGACATGTAGGTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: LHQVTEHLRLWWGMPAQQLKHPP*TCRFQI
Trigger: TATTTGAAACCTACATGTCCAAGGAGGATGTTTCAG...CTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CCA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTTCATGAAACTTCTTTaGGTTGATTCTCAATACACC +
Preference number: 4 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGFMKLL*VDSQYT
Trigger: GGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR TCA 90 bp GACTCCAGGGGGCCACTCTCCTTTACTAGAACTGCGAAGAAGAGGCCGATGCTGCATGGACTTGTTCTTTaGCTTTTTGTCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: DSRGPLSFTRTAKKRPMLHGLVL*LFVTWR
Trigger: TCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATG...CAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR TCA 90 bp CTCGACGCTGTGCTCTGGAGAAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCCATCCGGAGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LDAVLWRNWGKLFLRDLLHPEKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCTCCGGATG...GAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp TCCTTCCAGTCTATGATGCGGCAGATGAACAGCGTGTaGGCAAAGTCTTTAGGTCGGGTCATGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFQSMMRQMNSV*AKSLGRVMKSW
Trigger: CCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGTTCATCTGCCGCATCATAGACTGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp ATGGTGAAGATACAGTCTTTCCTTAGGTCTCTTCTCTaGCCCACCTCATCAGGTGGGATTGTCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MVKIQSFLRSLL*PTSSGGIVQGR
Trigger: CCTGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACTGTATCTTCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp GAAGCATGGGGACCACCTTCTGGACCAAGTAGACACTaGTGGCTCTCTCAGCAGCTACTTTATCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EAWGPPSGPSRH*WLSQQLLYPKR
Trigger: CCTCTTTGGATAAAGTAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCCAGAAGGTGGTCCCCATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp AAATTGGGGGAAGCTCTTCCTCAGGGATCTTCTCAGTaGGATTTTCGATCATGCTCTGGGCATGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: KLGEALPQGSSQ*DFRSCSGHGRS
Trigger: GCTACGACCATGCCCAGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
3UTR CAA 72 bp CTTGTTGCTGTCTCGGTACTCATAGATGTGACATCCTaGAGGCAGTCCAGTCTCATGGTCCAGAGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LVAVSVLIDVTS*RQSSLMVQSKS
Trigger: GCTTTTACTCTGGACCATGAGACTGGACTGCCTCAAGGATGTCACATCTATGAGTACCGAGACAGCAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTGGGCCACCGCCATGTaGGCCAGGAGCATGAACTCC +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRWATAM*ARSMNS
Trigger: GGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTGGGCCACCGCCATGTaGGCCAGGAGCATGAACTCC +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGWATAM*ARSMNS
Trigger: GGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAGCTCCTGCACACGTTaGGAAGCCATGCGACGGTCA +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLSSCTR*EAMRRS
Trigger: TGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGAGGATAGCACTGTACTaGAGGGCTGTGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLRIALY*RAVASA
Trigger: GGCAGAGGCCACAGCCCTCAAGTACAGTGCTATCCT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCTTAGGTCTCTTCTCTaGCCCACCTCATCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLLRSLL*PTSSGG
Trigger: CCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGACCAGGCCACTGGTGTaGCCATGTCTATCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLTRPLV*PCLSSE
Trigger: CTCAGAAGATAGACATGGCAACACCAGTGGCCTGGT...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTCTCTGATAAGCCTCTaGTGTCCTGTGGTATGGGGG +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLSLISL*CPVVWG
Trigger: CCCCCATACCACAGGACACAAGAGGCTTATCAGAGA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTGTCCAGGGCAGGCTTaGAGGGAGACATTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLCPGQA*RETFKN
Trigger: GTTCTTGAATGTCTCCCTCAAAGCCTGCCCTGGACA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTTGTCAGTCATGGGGTaGAGGCTGCAGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLLSVMG*RLQSSS
Trigger: TGAGGAACTCTGCAGCCTCAACCCCATGACTGACAA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCACTCTTCAAGGATCTaGCCTTCAGGGGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLHSSRI*PSGVSF
Trigger: GAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGTG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGAGCTCCTGCACACGTTaGGAAGCCATGCGACGGTCA +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRSSCTR*EAMRRS
Trigger: TGACCGTCGCATGGCTTCCAAACGTGTGCAGGAGCT...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCTTAGGTCTCTTCTCTaGCCCACCTCATCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRLRSLL*PTSSGG
Trigger: CCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAGGATAGCACTGTACTaGAGGGCTGTGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLRERIALY*RAVASA
Trigger: GGCAGAGGCCACAGCCCTCAAGTACAGTGCTATCCT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS CCA 90 bp GCGAAGCACCAACAGCACTCGGGCCAACCACAGAGGACACACCTCTaGGGGTCCCCGGAGACCGAAGGTTCAGCTTGTAGTCAGGATGGT +
Preference number: 5 (lower is better)
Translates to: AKHQQHSGQPQRTHL*GSPETEGSACSQDG
Trigger: ACCATCCTGACTACAAGCTGAACCTTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTGTGGTTGGCCCGAGTGCTGTTGGTGCTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGACCAGGCCACTGGTGTaGCCATGTCTATCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRTRPLV*PCLSSE
Trigger: CTCAGAAGATAGACATGGCAACACCAGTGGCCTGGT...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGTCTCTGATAAGCCTCTaGTGTCCTGTGGTATGGGGG +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGSLISL*CPVVWG
Trigger: CCCCCATACCACAGGACACAAGAGGCTTATCAGAGA...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGTTTCAGGATGCCAGTaGCTGCTCGAGAATGCTTTT +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLVSGCQ*LLENAF
Trigger: AAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAAC...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGGACCAAGTAGACACTaGTGGCTCTCTCAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGGPSRH*WLSQQL
Trigger: TAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGACAGAGAAGGTCAGCTaGTCAGTCATGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGTEKVS*SVMGLR
Trigger: CCTCAACCCCATGACTGACAAGCTGACCTTCTCTGT...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCACTCTTCAAGGATCTaGCCTTCAGGGGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRHSSRI*PSGVSF
Trigger: GAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGTG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTGTGCTCTGGAGAAATaGGGGGAAGCTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRCALEK*GEALPQ
Trigger: CTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGCAGATGAACAGCGTGTaGGCAAAGTCTTTAGGTCGG +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRQMNSV*AKSLGR
Trigger: CCGACCTAAAGACTTTGCCAACACGCTGTTCATCTG...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATGTCCAGGGCAGGCTTaGAGGGAGACATTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLRECPGQA*RETFKN
Trigger: GTTCTTGAATGTCTCCCTCAAAGCCTGCCCTGGACA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGGACCAAGTAGACACTaGTGGCTCTCTCAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLREGPSRH*WLSQQL
Trigger: TAGCTGCTGAGAGAGCCACAAGTGTCTACTTGGTCC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTGTCAGTCATGGGGTaGAGGCTGCAGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELSVMG*RLQSSS
Trigger: TGAGGAACTCTGCAGCCTCAACCCCATGACTGACAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAACAGAGAAGGTCAGCTaGTCAGTCATGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLRETEKVS*SVMGLR
Trigger: CCTCAACCCCATGACTGACAAGCTGACCTTCTCTGT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGCAGGGATCTTCTCAGTaGGATTTTCGATCATGCTCT +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLQGSSQ*DFRSCS
Trigger: AGAGCATGATCGAAAATCCAACTGAGAAGATCCCTG...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGATGCCGGCGCAGCAGGGCCTGCTCAGGGAAGGTGCGGAAGATCTTGTGGGCCTTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: GCRRSRACSGKVRKILWALFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAA...GGCCCACAAGATCTTCCGCACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGGCATGGACTTGTTCTTaGACTTTTTGTCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGAWTCS*TFCHLA
Trigger: CGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGC...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTTCCCTCGCATGGACTaGTTCTTTGACTTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLFPRMD*FFDFLS
Trigger: TGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGACTCTTAGCCAGTaGCCCCAGGGCAAAATTACA +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGKTLSQ*PQGKIT
Trigger: TGTAATTTTGCCCTGGGGCAACTGGCTAAGAGTCTT...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGCATGGACTTGTTCTTaGACTTTTTGTCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLREAWTCS*TFCHLA
Trigger: CGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGGAAGGGCAGTGGGTCGCCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGTCTATTTCTTTGTCATaGCTCTCTGGTTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: GKGSGSPGRSGAACPGGLSISLS*LSGLTA
Trigger: GGCAGTTAAACCAGAGAGCAATGACAAAGAAATAGA...CAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGGCGACCCACTGCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAGTTTCAGGATGCCAGTaGCTGCTCGAGAATGCTTTT +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLREVSGCQ*LLENAF
Trigger: AAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAAC...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAAAAGACTCTTAGCCAGTaGCCCCAGGGCAAAATTACA +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLREKTLSQ*PQGKIT
Trigger: TGTAATTTTGCCCTGGGGCAACTGGCTAAGAGTCTT...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGCAGGGATCTTCTCAGTaGGATTTTCGATCATGCTCT +
Preference number: 5 (lower is better)
Translates to: LVEAGLPAQEDWDPLCSGQGSSQ*DFRSCS
Trigger: AGAGCATGATCGAAAATCCAACTGAGAAGATCCCTG...CCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp GGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGGAATTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: GRSGAACPGGLGSSLLRELFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAA...TTCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTTCCCTCGCATGGACTaGTTCTTTGACTTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRFPRMD*FFDFLS
Trigger: TGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp CCTGGTAGAAGCGGGGCTGCCTGCCCAGGAGGACTGGGATCCTCTCTGCTCAGGTCTATTTCTTTGTCATaGCTCTCTGGTTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: PGRSGAACPGGLGSSLLRSISLS*LSGLTA
Trigger: GGCAGTTAAACCAGAGAGCAATGACAAAGAAATAGA...CCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS-3UTR CAA 90 bp TCGAAGGTGCCATCAGTGAGCCGCCTGCAGGCGAGGGCATCATCAAGGTCGCGATTCCCTCGCATGGACTaGTTCTTTGACTTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SKVPSVSRLQARASSRSRFPRMD*FFDFLS
Trigger: TGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAA...TCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGGCACCTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS-3UTR CAA 90 bp CAGTCTTTCCTTAGGTCTCTTCTCTTGCCCACCTCATCAGGTGGGATTGTCCAGGCATGGACTTGTTCTTaGACTTTTTGTCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: QSFLRSLLLPTSSGGIVQAWTCS*TFCHLA
Trigger: CGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGC...CTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190618.7
CDS TCA 90 bp AATCCCAGCACTCCAGGCAGAGACAAGGTTATCCTTGGCTTCCACTaGTCCTCAGGAAGCAGTTTTACAACCACAAGGTCCCCATTTAAG +
Preference number: 5 (lower is better)
Translates to: NPSTPGRDKVILGFH*SSGSSFTTTRSPFK
Trigger: CTTAAATGGGGACCTTGTGGTTGTAAAACTGCTTCCTGAGGATCAGTGGAAGCCAAGGATAACCTTGTCTCTGCCTGGAGTGCTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168237.8
CDS TCA 90 bp GGTTTCAAATATGCTCTTTTTCTTCCCTCGCATGGACTTGTTCTTTaGCTTTTTGTCACCTGGCGAAGCACCAACAGCACTCGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GFKYALFLPSHGLVL*LFVTWRSTNSTRAN
Trigger: GTTGGCCCGAGTGCTGTTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATATTTGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS CCA 90 bp CCGATCACCATCCGGAGAAGGAATGAAGGCTTCATGAAACTTCTTTaGGTTGATTCTCAATACACCCTGGATAAGTGTTCCTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PITIRRRNEGFMKLL*VDSQYTLDKCSSLQ
Trigger: TTGAAGAGAGGAACACTTATCCAGGGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCTCCGGATGGTGATCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS TCA 90 bp ATAAAAATGTCCCGATCACCATCCGGAGAAGGAATGAAGGCTTCATaGAACTTCTTTGGGTTGATTCTCAATACACCCTGGATAAGTGTT +
Preference number: 5 (lower is better)
Translates to: IKMSRSPSGEGMKAS*NFFGLILNTPWISV
Trigger: AACACTTATCCAGGGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCTCCGGATGGTGATCGGGACATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS TCA 90 bp GATTCTCAATACACCCTGGATAAGTGTTCCTCTCTTCAAGCCTTCTaGAACATCCTCCTTGGACATGTAGGTTTCAAATATGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: DSQYTLDKCSSLQAF*NILLGHVGFKYALF
Trigger: AAAAAGAGCATATTTGAAACCTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTTATCCAGGGTGTATTGAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS CCA 72 bp CAACAGCACTCGGGCCAACCACAGAGGACACACCTCTaGGGGTCCCCGGAGACCGAAGGTTCAGCTTGTAGT +
Preference number: 6 (lower is better)
Translates to: QQHSGQPQRTHL*GSPETEGSACS
Trigger: ACTACAAGCTGAACCTTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTGTGGTTGGCCCGAGTGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS CCA 72 bp GTCCTCAGGCTCCTCATCAGACGCCTTCTCCAGGCCTaGTCGCTTCAGGATAGCACTGTACTTGAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VLRLLIRRLLQA*SLQDSTVLEGC
Trigger: ACAGCCCTCAAGTACAGTGCTATCCTGAAGCGACCAGGCCTGGAGAAGGCGTCTGATGAGGAGCCTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
CDS TCA 72 bp ACTCCAGGCAGAGACAAGGTTATCCTTGGCTTCCACTaGTCCTCAGGAAGCAGTTTTACAACCACAAGGTCC +
Preference number: 6 (lower is better)
Translates to: TPGRDKVILGFH*SSGSSFTTTRS
Trigger: GGACCTTGTGGTTGTAAAACTGCTTCCTGAGGATCAGTGGAAGCCAAGGATAACCTTGTCTCTGCCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168237.8
CDS CAA 72 bp GTAATCCCAGCACTCCAGGCAGAGACAAGGTTATCCTaGGCTTCCACTGATCCTCAGGAAGCAGTTTTACAA +
Preference number: 6 (lower is better)
Translates to: VIPALQAETRLS*ASTDPQEAVLQ
Trigger: TTGTAAAACTGCTTCCTGAGGATCAGTGGAAGCCAAGGATAACCTTGTCTCTGCCTGGAGTGCTGGGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168237.8
CDS CAA 90 bp AGGTTTCAAATATGCTCTTTTTCTTCCCTCGCATGGACTTGTTCTTaGACTTTTTGTCACCTGGCGAAGCACCAACAGCACTCGGGCCAA +
Preference number: 6 (lower is better)
Translates to: RFQICSFSSLAWTCS*TFCHLAKHQQHSGQ
Trigger: TTGGCCCGAGTGCTGTTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATATTTGAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS CAA 72 bp ATATGCTCTTTTTCTTCCCTCGCATGGACTTGTTCTTaGACTTTTTGTCACCTGGCGAAGCACCAACAGCAC +
Preference number: 6 (lower is better)
Translates to: ICSFSSLAWTCS*TFCHLAKHQQH
Trigger: GTGCTGTTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS CAA 72 bp GTTTCAAATATGCTCTTTTTCTTCCCTCGCATGGACTaGTTCTTTGACTTTTTGTCACCTGGCGAAGCACCA +
Preference number: 6 (lower is better)
Translates to: VSNMLFFFPRMD*FFDFLSPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATATTTGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7
CDS TCA 72 bp TACACCCTGGATAAGTGTTCCTCTCTTCAAGCCTTCTaGAACATCCTCCTTGGACATGTAGGTTTCAAATAT +
Preference number: 6 (lower is better)
Translates to: YTLDKCSSLQAF*NILLGHVGFKY
Trigger: ATATTTGAAACCTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTTATCCAGGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065694.8
ENSMUST00000168237.8
ENSMUST00000190618.7