Pregenerated sensors for DIS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033166Ensembl transcript IDs: ENSMUST00000042471.11, ENSMUST00000227022.2, ENSMUST00000228643.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCTTAGCTGCTaGGCCACCTTTCCAGCACCTGGTAAAGAGCAGTCTTGTGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: PEILWKSSQCLPLSC*ATFPAPGKEQSCVF Trigger: GAAAACACAAGACTGCTCTTTACCAGGTGCTGGAAAGGTGGCTCAGCAGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR CCA 90 bp | TCTTTCGTCTGCAGGTCGATTGGGTCGTGGGTTTCACTGTCCATGTaGAATCGGATCTCTGGAGAAGACAGAGTCAAAGCCCCCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: SFVCRSIGSWVSLSM*NRISGEDRVKAPFS Trigger: TGAAAAGGGGGCTTTGACTCTGTCTTCTCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR TCA 90 bp | AACTCAGGTCCTTCGTTCAGAAGAGCAGCCAGTGTCCTTAACCGCTaGGCCATCTCTCCAGCCCTTGTTATCTTCATCCTTTCAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: NSGPSFRRAASVLNR*AISPALVIFILSDL Trigger: CAGATCTGAAAGGATGAAGATAACAAGGGCTGGAGAGATGGCTCAGCGGTTAAGGACACTGGCTGCTCTTCTGAACGAAGGACCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR CCA 90 bp | CACCATGGAATTTGTTTCTCTCAGCTCTTTCGTCTGCAGGTCGATTaGGTCGTGGGTTTCACTGTCCATGTGGAATCGGATCTCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: HHGICFSQLFRLQVD*VVGFTVHVESDLWR Trigger: TCTCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAATTCCATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR CCA 90 bp | GTCGATTGGGTCGTGGGTTTCACTGTCCATGTGGAATCGGATCTCTaGAGAAGACAGAGTCAAAGCCCCCTTTTCAATCCTTCCCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: VDWVVGFTVHVESDL*RRQSQSPLFNPSLF Trigger: AAAAAGGGAAGGATTGAAAAGGGGGCTTTGACTCTGTCTTCTCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR CCA 90 bp | GAATTTGTTTCTCTCAGCTCTTTCGTCTGCAGGTCGATTGGGTCGTaGGTTTCACTGTCCATGTGGAATCGGATCTCTGGAGAAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: EFVSLSSFVCRSIGS*VSLSMWNRISGEDR Trigger: TCTGTCTTCTCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR GCA 90 bp | AGGGCATCAGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTaGTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGAGCAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RASDLITNGCVLPCG*WNLNSGPSFRRAAS Trigger: ACTGGCTGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGATGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR GCA 90 bp | CTCAAGCTTCCTCTTCTTTCCCCCTGGTGCAGTAAGAGCCTTGTCTaGAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: LKLPLLSPWCSKSLV*NIRRNIYSWDLWFY Trigger: GTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCTCTTACTGCACCAGGGGGAAAGAAGAGGAAGCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR CCA 90 bp | TATCCATCCCAGAGCAGAAGTACACAGCTTGCATCATACAGCGAGTaGCCAGTATCCTTAATAGAGTATTCAGGTATGGGAAATCCGGAG | + |
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Preference number: 1 (lower is better) Translates to: YPSQSRSTQLASYSE*PVSLIEYSGMGNPE Trigger: CTCCGGATTTCCCATACCTGAATACTCTATTAAGGATACTGGCCACTCGCTGTATGATGCAAGCTGTGTACTTCTGCTCTGGGATGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR TCA 90 bp | ACCTTTACGAACAGGTTTGCAGCCTCCCGCTCTAGTCTCAGTCACTaGTCCATTTTAATTGGACCAAACACTTGCTTAGTTCTTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: TFTNRFAASRSSLSH*SILIGPNTCLVLPC Trigger: GCAAGGAAGAACTAAGCAAGTGTTTGGTCCAATTAAAATGGATCAGTGACTGAGACTAGAGCGGGAGGCTGCAAACCTGTTCGTAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR TCA 90 bp | ATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTaGACTCAGGTCCTTCGTTCAGAAGAGCAGCCAGTGTCCTTAACC | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVCYHVVAGI*TQVLRSEEQPVSLT Trigger: GGTTAAGGACACTGGCTGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR TCA 90 bp | TCCAACGCATTTCCTGGCCTGATAAAATGGCTAACATCCGCAATATaGACACCAACCTCCAAGTTTCCATTGCTGAGCTCTCTACAATGC | + |
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Preference number: 1 (lower is better) Translates to: SNAFPGLIKWLTSAI*TPTSKFPLLSSLQC Trigger: GCATTGTAGAGAGCTCAGCAATGGAAACTTGGAGGTTGGTGTTCATATTGCGGATGTTAGCCATTTTATCAGGCCAGGAAATGCGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR CCA 90 bp | CTTTGCAGCCTTAACAAGAATGTCATAATTCGAGGGAGGCGGAGCTaGGTGTTTCCGAAGCAGAGCATGTTCAGAAAACTCTTCATGAAT | + |
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Preference number: 1 (lower is better) Translates to: LCSLNKNVIIRGRRS*VFPKQSMFRKLFMN Trigger: ATTCATGAAGAGTTTTCTGAACATGCTCTGCTTCGGAAACACCCAGCTCCGCCTCCCTCGAATTATGACATTCTTGTTAAGGCTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR TCA 90 bp | ATGCCAACCTGTCAACGTTGGATCTTAAGGAACAGAGGTTGGAGCTaGGCAACTCTGGAACCATGTCAATCCTCTTTTCACAAAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: MPTCQRWILRNRGWS*ATLEPCQSSFHKDK Trigger: TTTATCTTTGTGAAAAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGTTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR TCA 90 bp | CCACCGAAGCACGCTGGGCATACTGAGCCATTTTATGCCGGAAATTaGGGTTTTTACATATATCTGAAAGCTTGTGTTTGTCTGTCAACT | + |
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Preference number: 1 (lower is better) Translates to: PPKHAGHTEPFYAGN*GFYIYLKACVCLST Trigger: AGTTGACAGACAAACACAAGCTTTCAGATATATGTAAAAACCTCAATTTCCGGCATAAAATGGCTCAGTATGCCCAGCGTGCTTCGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR GCA 90 bp | AGTAGCTCCACGGCCACAATGTCTTCATGCACAGCTCTGTTTAGATaGTTAATTCCCTGTATAAGTATCTCTTTTTCCTCTTCTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SSSTATMSSCTALFR*LIPCISISFSSSLS Trigger: AGACAAAGAAGAGGAAAAAGAGATACTTATACAGGGAATTAAGCATCTAAACAGAGCTGTGCATGAAGACATTGTGGCCGTGGAGCTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR TCA 90 bp | TTTAAATTTTATCTTGCCTGTATTTATTCATGGCTGTGTACTACTTaGATGCTGAAGGCCCGACATGGTATTGAAACTCCTGGAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: FKFYLACIYSWLCTT*MLKARHGIETPGSR Trigger: TCTGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAGCATTCAAGTAGTACACAGCCATGAATAAATACAGGCAAGATAAAATTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR TCA 90 bp | ATACTGAGCCATTTTATGCCGGAAATTGAGGTTTTTACATATATCTaGAAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: ILSHFMPEIEVFTYI*KLVFVCQLRVSTVS Trigger: GCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTTTCAGATATATGTAAAAACCTCAATTTCCGGCATAAAATGGCTCAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR GCA 90 bp | GTCTTCTACACACTAGGCAAGTTAACCACTAAGCTGTATGCTATATaGCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: VFYTLGKLTTKLYAI*PIPQQRTVIHKIEA Trigger: AGCTTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAGCTTAGTGGTTAACTTGCCTAGTGTGTAGAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR TCA 90 bp | CCTTGGGTGAATGATTTTGTTTTCCAAGAACATAACCATACTTGTTaGCATATTGTCTGGATGCTTATAAACTACAATTACAGCAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: PWVNDFVFQEHNHTC*HIVWMLINYNYSRA Trigger: CGCTCTGCTGTAATTGTAGTTTATAAGCATCCAGACAATATGTCAACAAGTATGGTTATGTTCTTGGAAAACAAAATCATTCACCCAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTACCACCCACTGGCTCCTaGGCAGTAGCTCCACGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRLCLPIALQHSQRRTTVPPTGS*AVAPRP Trigger: TGGCCGTGGAGCTACTGCCCAGGAGCCAGTGGGTGG...TACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCGGGTACCCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGCTTCTTTCCCCCTGGTaGAGTAAGAGCCTTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QMRVPQALSSYSPATLTTLLSPW*SKSLVC Trigger: GCAGACAAGGCTCTTACTGCACCAGGGGGAAAGAAG...CGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGGGTACCCGCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCCACTGGCTCCTGGGCAGTAGCTCCACGGCCACAATGTCTTCATGCACAGAGGAACCAGATTTTATaGCTTGTTGGAGCTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: PPTGSWAVAPRPQCLHAQRNQIL*LVGACL Trigger: TAAGCAAGCTCCAACAAGGCATAAAATCTGGTTCCT...CTGTGCATGAAGACATTGTGGCCGTGGAGCTACTGCCCAGGAGCCAGTGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR CAA 90 bp | CCACCATGGAATTTGTTTCTCTCAGCTCTTTCGTCTGCAGGTCGATaGGGTCGTGGGTTTCACTGTCCATGTGGAATCGGATCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PPWNLFLSALSSAGR*GRGFHCPCGIGSLE Trigger: CTCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAATTCCATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTATCTTCTTTGTCTCCATaGATCCATACTGTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PRLCLPIALQHSQRRTTVSSLSP*IHTVAS Trigger: GGAGGCTACAGTATGGATTCATGGAGACAAAGAAGA...TACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGTATGAAAAGCCACCGAAGCACGCTGGGCATACTGAGCCATTTTATGCCTATGTCAGTGCACCCTaGAGGGTCCACACTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TVYEKPPKHAGHTEPFYAYVSAP*RVHTAN Trigger: GTTTGCAGTGTGGACCCTCCAGGGTGCACTGACATA...GGCATAAAATGGCTCAGTATGCCCAGCGTGCTTCGGTGGCTTTTCATACACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTCCTCAGTAATGCTCCAGGGCATCCTGGGCAGGAAGCTAAGCACAGCCGATTTTATGCCTTGTTaGAGCTTGCTTAAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: MSSSVMLQGILGRKLSTADFMPC*SLLKGR Trigger: TCTTCCCTTAAGCAAGCTCCAACAAGGCATAAAATC...GGCTGTGCTTAGCTTCCTGCCCAGGATGCCCTGGAGCATTACTGAGGAGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCCAATCGCCACCTTCTTGCAGATTCTTaGTCCAACGCATTTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLVFVCQLRVSTVSPNRHLLADS*SNAFPG Trigger: GCCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAG...GTGGCGATTGGGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR-3UTR CCA 90 bp | AACAACAAAACTCAGGGTTCCAAACCAGATGCGGGTACCCCAGGCTTTGTCTTCGTGGAATCGGATCTCTaGAGAAGACAGAGTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NNKTQGSKPDAGTPGFVFVESDL*RRQSQS Trigger: GCTTTGACTCTGTCTTCTCCAGAGATCCGATTCCAC...GAAGACAAAGCCTGGGGTACCCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR CAA 90 bp | GAGGGCATCAGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTaGCTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGAGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: EGIRSHYKWLCATMW*LEFELRSFVQKSSQ Trigger: CTGGCTGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGATGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR CAA 90 bp | GGGAAATCCGGAGATTCAGCCCGGTCCAAAGAGTCGGCCAAAGATTaGGCTGTATCAGTCTTAATTTGCAAATTCTTGGACTTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GKSGDSARSKESAKD*AVSVLICKFLDFAA Trigger: GGCTGCAAAGTCCAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGACCGGGCTGAATCTCCGGATTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAGGGAGGCGGAGCTGGGTGTTTCCGAAGCAGAGCATGTTCAGAAAACTCTTCCATTTTGTTGCTGTTaGGTCTTTGGATGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SREAELGVSEAEHVQKTLPFCCC*VFGCSV Trigger: AACAGAACATCCAAAGACTCAACAGCAACAAAATGG...AAGAGTTTTCTGAACATGCTCTGCTTCGGAAACACCCAGCTCCGCCTCCCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGGCCCGACATGGTATTGAAACTCCTGGAAGCAGAATACAGTTGCCTAACCCAAACGCTGACAGCTaGAGATTTAGAAAGGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LKARHGIETPGSRIQLPNPNADS*RFRKAC Trigger: ACAAGCCTTTCTAAATCTTCAGCTGTCAGCGTTTGG...GTTAGGCAACTGTATTCTGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGCGTCTGCAGGTCGATTaGGTCGTGGGTTTCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: LSATLGGIFIPGICGSTRRLQVD*VVGFTV Trigger: GACAGTGAAACCCACGACCCAATCGACCTGCAGACG...CCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR CAA 90 bp | CAGGAAAATGCCAACCTGTCAACGTTGGATCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGAACCATGTCAATCCTCTTTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QENANLSTLDLKEQR*ELSNSGTMSILFSQ Trigger: TTGTGAAAAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGTTGGCATTTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| 3UTR CAA 90 bp | TACTTCTCAAGCTTCCTCTTCTTTCCCCCTGGTGCAGTAAGAGCCTaGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: YFSSFLFFPPGAVRA*SATLGGIFIPGICG Trigger: ACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCTCTTACTGCACCAGGGGGAAAGAAGAGGAAGCTTGAGAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCTTCCTTGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGCACTTGAGCCATTTTGTTGCTGTTaGGTCTTTGGATGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LVLPCRAVVATLLIPALEPFCCC*VFGCSV Trigger: AACAGAACATCCAAAGACTCAACAGCAACAAAATGG...CTCAAGTGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCCAATCGCCACCCATTTTGTTGCTGTTaGGTCTTTGGATGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: KLVFVCQLRVSTVSPNRHPFCCC*VFGCSV Trigger: AACAGAACATCCAAAGACTCAACAGCAACAAAATGG...GTGGCGATTGGGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| 3UTR-3UTR TCA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGAACTATTGGCAACCATaGCTAGGGCTGCTGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: QLISLGFVRQGQSGTPNENYWQP*LGLLTE Trigger: TTCAGTCAGCAGCCCTAGTCATGGTTGCCAATAGTT...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR TCA 90 bp | AACAACAAAACTCAGGGTTCCAAACCAGATGCGGGTACCCCAGGCTTTGTCTTCCACTATCTGTTTTTGTaGGTAAGCAGACATGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: NNKTQGSKPDAGTPGFVFHYLFL*VSRHES Trigger: ACTCTCATGTCTGCTTACTCACAAAAACAGATAGTG...GAAGACAAAGCCTGGGGTACCCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
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| 3UTR-3UTR TCA 90 bp | CATCATGTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCATCTGGCACACCAAATaGGACTTCATTTGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: HHVSAKNQPEILWKSSQCIWHTK*DFICSF Trigger: AAAGGAACAAATGAAGTCTCATTTGGTGTGCCAGAT...GCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGACATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCATAACCATACTTGTTaGCATATTGTCTGGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: VSAKNQPEILWKSSQCLPHNHTC*HIVWML Trigger: AAGCATCCAGACAATATGTCAACAAGTATGGTTATG...AGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR GCA 90 bp | CATCATGTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCGGCAAAAAGATTAAATaGCAAACGCTGACAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HHVSAKNQPEILWKSSQCGKKIK*QTLTAE Trigger: TTCAGCTGTCAGCGTTTGGCATTTAATCTTTTTGCC...GCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGACATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR-3UTR GCA 90 bp | TCAGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTGCTTAGTTCTTCCTTaGCGGGCAGTGGTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SDLITNGCVLPCGCWNLNCLVLP*RAVVAT Trigger: TGTTGCCACCACTGCCCGGCAAGGAAGAACTAAGCA...GTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR CAA 90 bp | AAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTaGAACGTAGCTACTTCTCAAGCTTCCTCTTCTTTCCCCCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KYALHFVAVESLDVL*NVATSQASSSFPLV Trigger: CACCAGGGGGAAAGAAGAGGAAGCTTGAGAAGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGGAAGCAGAATACAGTTaGCTAACAGCCATCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LCATMWLLEFELRSFVQKEAEYS*LTAIMS Trigger: TGACATGATGGCTGTTAGGCAACTGTATTCTGCTTC...CTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGCGTATTCTTCACTTATaGTGCTCATTAGTGAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SSYSPATLTTEDHGKVEKRILHL*CSLVKV Trigger: TACCTTCACTAATGAGCACCATAAGTGAAGAATACG...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAGCCGCCGAATCAATTCTCATCTGTGCTTCCGCGTACGTAAGAGAAGCCTTACAGCTCTGTTTAGATaGTTAATTCCCTGTATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HSRRINSHLCFRVRKRSLTALFR*LIPCIS Trigger: ACTTATACAGGGAATTAAGCATCTAAACAGAGCTGT...AAGGCTTCTCTTACGTACGCGGAAGCACAGATGAGAATTGATTCGGCGGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR CAA 90 bp | CCTCTTTTCACAAAGATAAACAGTTGTTCCTCTTCTTGCAGATTCTaGATCCAACGCATTTCCTGGCCTGATAAAATGGCTAACATCCGC | + |
|
Preference number: 2 (lower is better) Translates to: PLFTKINSCSSSCRF*IQRISWPDKMANIR Trigger: GCGGATGTTAGCCATTTTATCAGGCCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAGAGGAACAACTGTTTATCTTTGTGAAAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGCTGGGCATACTGAGCCATTTTATGCCGGAAATTGAGGTTTTTACATATATCCCAAACGCTGACAGCTaGAGATTTAGAAAGGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TLGILSHFMPEIEVFTYIPNADS*RFRKAC Trigger: ACAAGCCTTTCTAAATCTTCAGCTGTCAGCGTTTGG...GATATATGTAAAAACCTCAATTTCCGGCATAAAATGGCTCAGTATGCCCAGCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGGCCCGACATGGTATTGAAACTCCTGGAAGCAGAATACAGTTGCCTAACCTGATCCATTTTAATTaGACCAAACACTTGCTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKARHGIETPGSRIQLPNLIHFN*TKHLLS Trigger: ACTAAGCAAGTGTTTGGTCCAATTAAAATGGATCAG...GTTAGGCAACTGTATTCTGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR TCA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTTCTAGTCTCAGTCACTaGTCCATTTTAATTGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: LITNGCVLPCGCWNLNSGSSLSH*SILIGP Trigger: TGGTCCAATTAAAATGGATCAGTGACTGAGACTAGA...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGTAGCTACTGGCAAAAAGATTAAATaGCAAACGCTGACAGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALHFVAVESLDVLLNVATGKKIK*QTLTAE Trigger: TTCAGCTGTCAGCGTTTGGCATTTAATCTTTTTGCC...AGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGACCTTATCAAACACATaGAACACTGTACCTTCTATT | + |
|
Preference number: 2 (lower is better) Translates to: LSATLGGIFIPGICGSTRTLSNT*NTVPSI Trigger: AATAGAAGGTACAGTGTTCCATGTGTTTGATAAGGT...CCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR CCA 72 bp | CTAAAACCACGGAAGACGGTGCCACCCACTGGCTCCTaGGCAGTAGCTCCACGGCCACAATGTCTTCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKPRKTVPPTGS*AVAPRPQCLHA Trigger: TGCATGAAGACATTGTGGCCGTGGAGCTACTGCCCAGGAGCCAGTGGGTGGCACCGTCTTCCGTGGTTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCTTAGCTGCTGAGCCACCTTTCTTGCTTAGTTCTTCCTaGCCGGGCAGTGGTGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSSGRVASACLLAAEPPFLLSSS*PGSGGN Trigger: GTTGCCACCACTGCCCGGCAAGGAAGAACTAAGCAA...GAAAGGTGGCTCAGCAGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR TCA 72 bp | CTCTGGAAGAGTAGCCAGTGCTTGCCTCTTAGCTGCTaGGCCACCTTTCCAGCACCTGGTAAAGAGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWKSSQCLPLSC*ATFPAPGKEQS Trigger: AGACTGCTCTTTACCAGGTGCTGGAAAGGTGGCTCAGCAGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR GCA 72 bp | ATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTaGCTCTTAGCTGCTGAGCCACCTTTCCAGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: INLRSSGRVASA*LLAAEPPFQHL Trigger: CAGGTGCTGGAAAGGTGGCTCAGCAGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CCA 72 bp | TCTCTCAGCTCTTTCGTCTGCAGGTCGATTGGGTCGTaGGTTTCACTGTCCATGTGGAATCGGATCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSSFVCRSIGS*VSLSMWNRISG Trigger: TCCAGAGATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR CCA 72 bp | TCTACAATGCAGAGCGTCATCTATGTCAGTGCACCCTaGAGGGTCCACACTGCAAACACACAGATGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: STMQSVIYVSAP*RVHTANTQMSQ Trigger: CTGAGACATCTGTGTGTTTGCAGTGTGGACCCTCCAGGGTGCACTGACATAGATGACGCTCTGCATTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR TCA 72 bp | CCTAAGCCACTATCTGTTTTTGTGAGTAAGCAGACATaGGAGTACCCCCTTTCTTCCTCCTCGGTGACGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKPLSVFVSKQT*EYPLSSSSVTP Trigger: AGGCGTCACCGAGGAGGAAGAAAGGGGGTACTCTCATGTCTGCTTACTCACAAAAACAGATAGTGGCTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
||
| 3UTR GCA 72 bp | TCCACCATGGAATTTGTTTCTCTCAGCTCTTTCGTCTaGAGGTCGATTGGGTCGTGGGTTTCACTGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: STMEFVSLSSFV*RSIGSWVSLSM Trigger: CATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAATTCCATGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGAGGGAGGCGGAGCTGGGTGTTTCCGAAGCAGAGCATGTTCAGAAAACTCTTAGTATGCTCTCCATTTaGTTGCTGTTGAGTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SREAELGVSEAEHVQKTLSMLSI*LLLSLW Trigger: CCAAAGACTCAACAGCAACAAAATGGAGAGCATACT...AAGAGTTTTCTGAACATGCTCTGCTTCGGAAACACCCAGCTCCGCCTCCCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR TCA 72 bp | GGAAAACTATTGGCAACCATGACTAGGGCTGCTGACTaGACAACAAAACTCAGGGTTCCAAACCAGATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GKLLATMTRAAD*TTKLRVPNQMR Trigger: CCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTTCAGTCAGCAGCCCTAGTCATGGTTGCCAATAGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
||
| 3UTR TCA 72 bp | CAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTaGACTCAGGTCCTTCGTTCAGAAGAGCAGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QMVVCYHVVAGI*TQVLRSEEQPV Trigger: CACTGGCTGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CCA 72 bp | ATTTGTTTCTCTCAGCTCTTTCGTCTGCAGGTCGATTaGGTCGTGGGTTTCACTGTCCATGTGGAATCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ICFSQLFRLQVD*VVGFTVHVESD Trigger: ATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAACAAAACTCAGGGTTCCAAACCAGATGCGGGTACCCCAGGCTTTGTCTTCTCTTCTTGCAGATTCTaGATCCAACGCATTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NNKTQGSKPDAGTPGFVFSSCRF*IQRISW Trigger: CCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAGA...GAAGACAAAGCCTGGGGTACCCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTATGAAAAGCCACCGAAGCACGCTGGGCATACTGAGCCATTTTATGCCCTTCCACCATGGAATTaGTTTCTCTCAGCTCTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: TVYEKPPKHAGHTEPFYALPPWN*FLSALS Trigger: CGAAAGAGCTGAGAGAAACAAATTCCATGGTGGAAG...GGCATAAAATGGCTCAGTATGCCCAGCGTGCTTCGGTGGCTTTTCATACACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGTACCTTCTATTCTCAGGGAAGGGATCTCATCATCGTAAGCAAGGCGTGGGTTGCTGTTGAGTCTTaGGATGTTCTGTTGAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: HCTFYSQGRDLIIVSKAWVAVES*DVLLNV Trigger: TACGTTCAACAGAACATCCAAAGACTCAACAGCAAC...CCACGCCTTGCTTACGATGATGAGATCCCTTCCCTGAGAATAGAAGGTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTATGAAAAGCCACCGAAGCACGCTGGGCATACTGAGCCATTTTATGCCGTTGCTGTTGAGTCTTaGGATGTTCTGTTGAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: TVYEKPPKHAGHTEPFYAVAVES*DVLLNV Trigger: TACGTTCAACAGAACATCCAAAGACTCAACAGCAAC...GGCATAAAATGGCTCAGTATGCCCAGCGTGCTTCGGTGGCTTTTCATACACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTCTTCCTTGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGCACTTGAGATGCTCTCCATTTTGTaGCTGTTGAGTCTTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LVLPCRAVVATLLIPALEMLSIL*LLSLWM Trigger: CATCCAAAGACTCAACAGCAACAAAATGGAGAGCAT...CTCAAGTGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR TCA 72 bp | TATAGAAATGCTTTTCCTGGTTATTGGTCACATCCCTaGTTCGCTTGTAGATGGGGGCGCTCCGGTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YRNAFPGYWSHP*FACRWGRSGFS Trigger: TGAGAAACCGGAGCGCCCCCATCTACAAGCGAATCAGGGATGTGACCAATAACCAGGAAAAGCATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR GCA 72 bp | CCTCTTCTTTCCCCCTGGTGCAGTAAGAGCCTTGTCTaGAACATTAGGAGGAATATTTATTCCTGGGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLLSPWCSKSLV*NIRRNIYSWDL Trigger: CAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCTCTTACTGCACCAGGGGGAAAGAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR CCA 72 bp | GTACAGTCAGCCCCAATCGCCACAGCTAATAGCCGATaGACAATTATGTCTGCATATCTTCTGATAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VQSAPIATANSR*TIMSAYLLIGE Trigger: CTCTCCTATCAGAAGATATGCAGACATAATTGTCCATCGGCTATTAGCTGTGGCGATTGGGGCTGACTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGTACAGTCAGCCCCAATCGCCACAGCTAATAGCCGATGGACAATTATGTATGCTCTCCATTTTGTaGCTGTTGAGTCTTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GKYSQPQSPQLIADGQLCMLSIL*LLSLWM Trigger: CATCCAAAGACTCAACAGCAACAAAATGGAGAGCAT...ACATAATTGTCCATCGGCTATTAGCTGTGGCGATTGGGGCTGACTGTACTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGAATTGGACCAAACACTaGCTTAGTTCTTCCTTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LCATMWLLEFELRSFVQKNWTKH*LSSSLP Trigger: CGGCAAGGAAGAACTAAGCAAGTGTTTGGTCCAATT...CTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTGTGGTTCTACAAGGGCCATGCGGATTTTCTGATGTTGAAGATTTGATGTGCTTTTCCTGGTTATaGGTCACATCCCTGATTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GSVVLQGPCGFSDVEDLMCFSWL*VTSLIR Trigger: GCGAATCAGGGATGTGACCAATAACCAGGAAAAGCA...CATCAAATCTTCAACATCAGAAAATCCGCATGGCCCTTGTAGAACCACAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR CCA 72 bp | CAGAGCAGAAGTACACAGCTTGCATCATACAGCGAGTaGCCAGTATCCTTAATAGAGTATTCAGGTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSRSTQLASYSE*PVSLIEYSGMG Trigger: TCCCATACCTGAATACTCTATTAAGGATACTGGCCACTCGCTGTATGATGCAAGCTGTGTACTTCTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGTTTCTGTCTCCTTCTCTCCAACATCGCCTAAATTCTTTACAAAGTGTCATGCCTTGTTGGAGCTaGCTTAAGGGAAGATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPFLSPSLQHRLNSLQSVMPCWS*LKGRCS Trigger: AGAGCATCTTCCCTTAAGCAAGCTCCAACAAGGCAT...GACACTTTGTAAAGAATTTAGGCGATGTTGGAGAGAAGGAGACAGAAACGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR TCA 72 bp | AACAGGTTTGCAGCCTCCCGCTCTAGTCTCAGTCACTaGTCCATTTTAATTGGACCAAACACTTGCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NRFAASRSSLSH*SILIGPNTCLV Trigger: AACTAAGCAAGTGTTTGGTCCAATTAAAATGGATCAGTGACTGAGACTAGAGCGGGAGGCTGCAAACCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR TCA 72 bp | CCTGTATTTATTCATGGCTGTGTACTACTTGAATGCTaGAGGCCCGACATGGTATTGAAACTCCTGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVFIHGCVLLEC*RPDMVLKLLEA Trigger: TGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAGCATTCAAGTAGTACACAGCCATGAATAAATACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR TCA 72 bp | TTTCCTGGCCTGATAAAATGGCTAACATCCGCAATATaGACACCAACCTCCAAGTTTCCATTGCTGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPGLIKWLTSAI*TPTSKFPLLSS Trigger: AGAGCTCAGCAATGGAAACTTGGAGGTTGGTGTTCATATTGCGGATGTTAGCCATTTTATCAGGCCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR GCA 72 bp | ATTTTAATTGGACCAAACACTTGCTTAGTTCTTCCTTaGCGGGCAGTGGTGGCAACACTTTTAATCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILIGPNTCLVLP*RAVVATLLIPA Trigger: TGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAAGCAAGTGTTTGGTCCAATTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR GCA 72 bp | GACATGGTATTGAAACTCCTGGAAGCAGAATACAGTTaGCTAACAGCCATCATGTCAGTGCCAAGAATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DMVLKLLEAEYS*LTAIMSVPRIN Trigger: GTTGATTCTTGGCACTGACATGATGGCTGTTAGGCAACTGTATTCTGCTTCCAGGAGTTTCAATACCATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CCA 72 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTaGAATTTGAACTCAGGTCCTTCGTTCAGAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LITNGCVLPCGC*NLNSGPSFRRA Trigger: TGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CCA 72 bp | GACACACCAGAAGAGGGCATCAGATCTCATTACAAATaGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DTPEEGIRSHYK*LCATMWLLEFE Trigger: TTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR CAA 90 bp | ACGCTGGGCATACTGAGCCATTTTATGCCGGAAATTGAGGTTTTTACATATATCTGCTTGGGAAAACTATaGGCAACCATGACTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLGILSHFMPEIEVFTYICLGKL*ATMTRA Trigger: AGCCCTAGTCATGGTTGCCAATAGTTTTCCCAAGCA...GATATATGTAAAAACCTCAATTTCCGGCATAAAATGGCTCAGTATGCCCAGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR GCA 72 bp | GATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTaGTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLITNGCVLPCG*WNLNSGPSFRR Trigger: TCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CCA 72 bp | ATCAGATCTCATTACAAATGGTTGTGTGCTACCATGTaGTTGCTGGAATTTGAACTCAGGTCCTTCGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IRSHYKWLCATM*LLEFELRSFVQ Trigger: CTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACTGCTTGGGAAAACTATaGGCAACCATGACTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CKYALHFVAVESLDVLLNCLGKL*ATMTRA Trigger: AGCCCTAGTCATGGTTGCCAATAGTTTTCCCAAGCA...GTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGTTGCTGTTGAGTCTTaGGATGTTCTGTTGAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: CKYALHFVAVESLDVLLNVAVES*DVLLNV Trigger: TACGTTCAACAGAACATCCAAAGACTCAACAGCAAC...GTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAATGCCTGTGTATTTGTAAAACCTGTAGCTATATCTACAAATACCTGGGGAGTATGCTCTCCATTTaGTTGCTGTTGAGTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TKCLCICKTCSYIYKYLGSMLSI*LLLSLW Trigger: CCAAAGACTCAACAGCAACAAAATGGAGAGCATACT...CCCCAGGTATTTGTAGATATAGCTACAGGTTTTACAAATACACAGGCATTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR GCA 72 bp | GAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTaGAAATTCTTGGACTTTGCAGCCTTAACAAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: ESAKDLAVSVLI*KFLDFAALTRM Trigger: CATTCTTGTTAAGGCTGCAAAGTCCAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| 3UTR GCA 72 bp | ACACTAGGCAAGTTAACCACTAAGCTGTATGCTATATaGCCGATTCCACAGCAAAGAACTGTTATACATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLGKLTTKLYAI*PIPQQRTVIHK Trigger: TTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAGCTTAGTGGTTAACTTGCCTAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR GCA 72 bp | TATTTATTCCTGGGATCTGTGGTTCTACAAGGGCCATaGGGATTTTCTGATGTTGAAGATTTGATGAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: YLFLGSVVLQGP*GFSDVEDLMNL Trigger: TAGATTCATCAAATCTTCAACATCAGAAAATCCGCATGGCCCTTGTAGAACCACAGATCCCAGGAATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | GGTAAGTACAGTCAGCCCCAATCGCCACAGCTAATAGCCGATGGACAATTATGTGCCACGGGCAGAGGCTaGTCGCCTGGTCCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKYSQPQSPQLIADGQLCATGRG*SPGPGA Trigger: AGCCCCGGGACCAGGCGAGCAGCCTCTGCCCGTGGC...ACATAATTGTCCATCGGCTATTAGCTGTGGCGATTGGGGCTGACTGTACTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTCCAAAGAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAAGCCACGGGCAGAGGCTaGTCGCCTGGTCCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSKESAKDLAVSVLICKATGRG*SPGPGA Trigger: AGCCCCGGGACCAGGCGAGCAGCCTCTGCCCGTGGC...TTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGACCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGGCCACGGGCAGAGGCTaGTCGCCTGGTCCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLISLGFVRQGQSGTPNEATGRG*SPGPGA Trigger: AGCCCCGGGACCAGGCGAGCAGCCTCTGCCCGTGGC...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CAA 72 bp | GAGTACCCCCTTTCTTCCTCCTCGGTGACGCCTTGCTaGGGAAAACTATTGGCAACCATGACTAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYPLSSSSVTPC*GKLLATMTRAA Trigger: AGCAGCCCTAGTCATGGTTGCCAATAGTTTTCCCAAGCAAGGCGTCACCGAGGAGGAAGAAAGGGGGTACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTTTGCAGCTGACTGTCTaGTGCCACCCTCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSAKNQPEILWKSSQCLPLQLTV*CHPLQV Trigger: CACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAA...AGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TTCGTCTGCAGGTCGATTGGGTCGTGGGTTTCACTGTCCATGTGGAATCGGATCTCGCTGCGACTCGGATaGCTCTGTCATTCCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVCRSIGSWVSLSMWNRISLRLG*LCHSCH Trigger: ATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGA...GATCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGAGGATAACTTGCAGCTaGCTGTCTGCTGCCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKRITCS*LSAATL Trigger: GAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCT...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGGGTGCAGCAGCACATTaGTGTCCGGCAGAAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKGAAAH*CPAEGS Trigger: ACTACCTTCTGCCGGACACCAATGTGCTGCTGCACC...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000227022.2 |
||
| CDS-3UTR CCA 90 bp | ATATATCTGAAAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCCCACCCACTGGCTCCTaGGCAGTAGCTCCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYLKACVCLSTQGKYSQPPPTGS*AVAPRP Trigger: TGGCCGTGGAGCTACTGCCCAGGAGCCAGTGGGTGG...GGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTTTCAGATATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGCGTCTGCAGGTCGATTaGGTCGTGGGTTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKRLQVD*VVGFTV Trigger: GACAGTGAAACCCACGACCCAATCGACCTGCAGACG...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTCTTTCGTCTGCAGGTCGATTGGGTCGTGGGTTTCACTGTCCATGTGGCAGGCACTTATAATCTaGTGCAGCAGCACATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSFVCRSIGSWVSLSMWQALII*CSSTLV Trigger: CACCAATGTGCTGCTGCACCAGATTATAAGTGCCTG...CCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAGAATTTTAGCCAGCTaGTTGAGTCCACGGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: PRLCLPIALQHSQRRTTVRILAS*LSPRRL Trigger: TAGTCTCCGTGGACTCAATCAGCTGGCTAAAATTCT...TACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCAGAAGTACACAGCTTaGATCATACAGCGAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAKNQPEILWKSSQCLPQKYTA*IIQRVA Trigger: GGCCACTCGCTGTATGATGCAAGCTGTGTACTTCTG...AGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | GTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGGACTTTGCGACGGTGCCACCCACTaGCTCCTGGGCAGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGQRFGCISLNLQILGLCDGATH*LLGSSS Trigger: GGAGCTACTGCCCAGGAGCCAGTGGGTGGCACCGTC...GCAAAGTCCAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | CAGATGCGGGTACCCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGGTTTCACTGTCCATGTaGAATCGGATCTCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QMRVPQALSSYSPATLTTVSLSM*NRISGE Trigger: TTCTCCAGAGATCCGATTCCACATGGACAGTGAAAC...CGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGGGTACCCGCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCGAGGGAGGCGGAGCTaGGTGTTTCCGAAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LITNGCVLPCGCWNLNSGRGRRS*VFPKQS Trigger: GCTCTGCTTCGGAAACACCCAGCTCCGCCTCCCTCG...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGCTGGAGGGTCCACACTaGAAACACACAGATGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKLEGPH*KHTDVS Trigger: TGAGACATCTGTGTGTTTGCAGTGTGGACCCTCCAG...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGTATCCTTAATAGAGTATTCAGGTATGGGAAATCCGGAGATTCAGCCCGGTTCACACGTGAAGGCTaGTATCCCCTCTTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASILNRVFRYGKSGDSARFTREG*YPLLHS Trigger: GCTGTGCAAGAGGGGATACCAGCCTTCACGTGTGAA...CCGGGCTGAATCTCCGGATTTCCCATACCTGAATACTCTATTAAGGATACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGACGGTGCCACCCACTaGCTCCTGGGCAGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKYALHFVAVESLDVLLNDGATH*LLGSSS Trigger: GGAGCTACTGCCCAGGAGCCAGTGGGTGGCACCGTC...GTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGCCCGACATGGTATTGAAACTCCTGGAAGCAGAATACAGTTGCCTAACTATGTCAGTGCACCCTaGAGGGTCCACACTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKARHGIETPGSRIQLPNYVSAP*RVHTAN Trigger: GTTTGCAGTGTGGACCCTCCAGGGTGCACTGACATA...GTTAGGCAACTGTATTCTGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGTATTCCTGGGATCTGTaGTTCTACAAGGGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKYSWDL*FYKGHA Trigger: CGCATGGCCCTTGTAGAACCACAGATCCCAGGAATA...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGTCTGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGGGGGTCGCAATCTaGAGGCCACAGAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGVCKYALHFVAVESLDVLGVAI*RPQKPR Trigger: CCTGGGCTTCTGTGGCCTCCAGATTGCGACCCCCAG...AACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR CAA 72 bp | GCCAACCTGTCAACGTTGGATCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGAACCATGTCAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANLSTLDLKEQR*ELSNSGTMSIL Trigger: GAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGTTGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTAAAAACAACTGTGTATaGAAAGCCACCGAAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VSAKNQPEILWKSSQCLPKNNCV*KATEAR Trigger: GCGTGCTTCGGTGGCTTTTCATACACAGTTGTTTTT...AGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGGGTGCAGCAGCACATTaGTGTCCGGCAGAAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLISLGFVRQGQSGTPNEGAAAH*CPAEGS Trigger: ACTACCTTCTGCCGGACACCAATGTGCTGCTGCACC...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | AACAACAAAACTCAGGGTTCCAAACCAGATGCGGGTACCCCAGGCTTTGTCTTCGGAGCTGAGCAACTCTaGAACCATGTCAATCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNKTQGSKPDAGTPGFVFGAEQL*NHVNPL Trigger: AAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCC...GAAGACAAAGCCTGGGGTACCCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | CACTGTACCTTCTATTCTCAGGGAAGGGATCTCATCATCGTAAGCAAGGCGTGGGGAGCTGAGCAACTCTaGAACCATGTCAATCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCTFYSQGRDLIIVSKAWGAEQL*NHVNPL Trigger: AAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCC...CCACGCCTTGCTTACGATGATGAGATCCCTTCCCTGAGAATAGAAGGTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| 3UTR CAA 72 bp | AATTTGTTTCTCTCAGCTCTTTCGTCTGCAGGTCGATaGGGTCGTGGGTTTCACTGTCCATGTGGAATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLFLSALSSAGR*GRGFHCPCGIG Trigger: TCCGATTCCACATGGACAGTGAAACCCACGACCCAATCGACCTGCAGACGAAAGAGCTGAGAGAAACAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGTCTTCTTTGTCTCCATaGATCCATACTGTAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKSSLSP*IHTVAS Trigger: GGAGGCTACAGTATGGATTCATGGAGACAAAGAAGA...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCTAACATCCGCAATATaGACACCAACCTCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSAKNQPEILWKSSQCLPLTSAI*TPTSKF Trigger: AAACTTGGAGGTTGGTGTTCATATTGCGGATGTTAG...AGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTGCCACCCTCTTCAGGTaGTCGTTGTACCACTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LITNGCVLPCGCWNLNSGATLFR*SLYHFA Trigger: AGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGC...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGTAGCTACTGCCACCCTCTTCAGGTaGTCGTTGTACCACTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHFVAVESLDVLLNVATATLFR*SLYHFA Trigger: AGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGC...AGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | ATATATCTGAAAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCGGTGCAGCAGCACATTaGTGTCCGGCAGAAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLKACVCLSTQGKYSQPGAAAH*CPAEGS Trigger: ACTACCTTCTGCCGGACACCAATGTGCTGCTGCACC...GGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTTTCAGATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGAGGATAACTTGCAGCTaGCTGTCTGCTGCCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSATLGGIFIPGICGSTRRITCS*LSAATL Trigger: GAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCT...CCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGTTGCAGCTGACTGTCTaGTGCCACCCTCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSATLGGIFIPGICGSTRLQLTV*CHPLQV Trigger: CACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAA...CCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTCCTTGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGCACTTGAGAGTTGTTCCTCTTCTTaGAGATTCTTGATCCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLPCRAVVATLLIPALESCSSS*RFLIQR Trigger: GCGTTGGATCAAGAATCTGCAAGAAGAGGAACAACT...CTCAAGTGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGGAGGCTAAGCCATAGTGATGAAAATCATTATCCATCCCAGAGCAGATCGAGGACATCAATCTaGTGCAGCAGCACATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IWGRLSHSDENHYPSQSRSRTSI*CSSTLV Trigger: CACCAATGTGCTGCTGCACCAGATTGATGTCCTCGA...TCTGCTCTGGGATGGATAATGATTTTCATCACTATGGCTTAGCCTCCCCCATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCTTCCTTGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGCACTTGAGTTCTATCCGAATTCGTaGAATTCTCTTATCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLPCRAVVATLLIPALEFYPNS*NSLISG Trigger: CCCGCTGATAAGAGAATTCCACGAATTCGGATAGAA...CTCAAGTGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | ATATATCTGAAAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCTATGTCAGTGCACCCTaGAGGGTCCACACTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYLKACVCLSTQGKYSQPYVSAP*RVHTAN Trigger: GTTTGCAGTGTGGACCCTCCAGGGTGCACTGACATA...GGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTTTCAGATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| 3UTR CAA 72 bp | ACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTaGAACTCAGGTCCTTCGTTCAGAAGAGCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNGCVLPCGCWN*NSGPSFRRAAS Trigger: ACTGGCTGCTCTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACCTGGAGGGTCCACACTaGAAACACACAGATGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVCNIRRNIYSWDLWFYLEGPH*KHTDVS Trigger: TGAGACATCTGTGTGTTTGCAGTGTGGACCCTCCAG...GTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | AATAGAGTATTCAGGTATGGGAAATCCGGAGATTCAGCCCGGTCCAAAGAGTCGAGTTGTTCCTCTTCTTaGAGATTCTTGATCCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: NRVFRYGKSGDSARSKESSCSSS*RFLIQR Trigger: GCGTTGGATCAAGAATCTGCAAGAAGAGGAACAACT...CGACTCTTTGGACCGGGCTGAATCTCCGGATTTCCCATACCTGAATACTCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGCTTGCATCATACAGCGAGTGGCCAGTATCCTTAATAGAGTATTCAGGGCACTTATAATCTGGTaGAGCAGCACATTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTACIIQRVASILNRVFRALIIW*SSTLVS Trigger: GGACACCAATGTGCTGCTGCACCAGATTATAAGTGC...CCTGAATACTCTATTAAGGATACTGGCCACTCGCTGTATGATGCAAGCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGTCTGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTTCGCTGCGACTCGGATaGCTCTGTCATTCCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGVCKYALHFVAVESLDVSLRLG*LCHSCH Trigger: ATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGA...AACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTTCACACGTGAAGGCTaGTATCCCCTCTTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLITNGCVLPCGCWNLNFTREG*YPLLHS Trigger: GCTGTGCAAGAGGGGATACCAGCCTTCACGTGTGAA...GTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CAA 72 bp | CATTTTAATTGGACCAAACACTTGCTTAGTTCTTCCTaGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFNWTKHLLSSS*PGSGGNTFNPS Trigger: GCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAAGCAAGTGTTTGGTCCAATTAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR TCA 90 bp | GAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGGCCATGCGGATTTTCTTCTTCTTTGTCTCCATaGATCCATACTGTAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEYLFLGSVVLQGPCGFSSSLSP*IHTVAS Trigger: GGAGGCTACAGTATGGATTCATGGAGACAAAGAAGA...AGAAAATCCGCATGGCCCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR TCA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCTTCTTGCAGATTCTTaGTCCAACGCATTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LITNGCVLPCGCWNLNSGLLADS*SNAFPG Trigger: GCCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAG...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | ACCAAATGCCTGTGTATTTGTAAAACCTGTAGCTATATCTACAAATACCTGGGGCTTCTTTCCCCCTGGTaGAGTAAGAGCCTTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKCLCICKTCSYIYKYLGLLSPW*SKSLVC Trigger: GCAGACAAGGCTCTTACTGCACCAGGGGGAAAGAAG...CCCCAGGTATTTGTAGATATAGCTACAGGTTTTACAAATACACAGGCATTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTGTGGAATCGGATCTCTaGAGAAGACAGAGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LITNGCVLPCGCWNLNSGVESDL*RRQSQS Trigger: GCTTTGACTCTGTCTTCTCCAGAGATCCGATTCCAC...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACAGGTCGATTGGGTCGTaGGTTTCACTGTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CKYALHFVAVESLDVLLNRSIGS*VSLSMW Trigger: CCACATGGACAGTGAAACCCACGACCCAATCGACCT...GTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTAAAGTAGAGAAGAGGAATATTTATTCCTaGGATCTGTGGTTCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYSPATLTTEDHGKVEKRNIYS*DLWFYK Trigger: CTTGTAGAACCACAGATCCCAGGAATAAATATTCCT...CTTCTCTACTTTACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CAA 72 bp | ATTTCCCAAATACAGGAAAATGCCAACCTGTCAACGTaGGATCTTAAGGAACAGAGGTTGGAGCTGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISQIQENANLST*DLKEQRLELSN Trigger: GTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGTTGGCATTTTCCTGTATTTGGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| CDS-3UTR TCA 90 bp | GTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGGACTTTGCCTTCTTGCAGATTCTTaGTCCAACGCATTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGQRFGCISLNLQILGLCLLADS*SNAFPG Trigger: GCCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAG...GCAAAGTCCAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | GTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGGACTTTGCCAGACTTGGAAAGCATaGCACAATACGGTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGQRFGCISLNLQILGLCQTWKA*HNTVSS Trigger: ACTGGAGACCGTATTGTGGCATGCTTTCCAAGTCTG...GCAAAGTCCAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGGTTCTACAAGGGCCATaGGGATTTTCTGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLISLGFVRQGQSGTPNEVLQGP*GFSDVE Trigger: TTCAACATCAGAAAATCCGCATGGCCCTTGTAGAAC...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGGAGGCTAAGCCATAGTGATGAAAATCATTATCCATCCCAGAGCAGATTCTATCCGAATTCGTaGAATTCTCTTATCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IWGRLSHSDENHYPSQSRFYPNS*NSLISG Trigger: CCCGCTGATAAGAGAATTCCACGAATTCGGATAGAA...TCTGCTCTGGGATGGATAATGATTTTCATCACTATGGCTTAGCCTCCCCCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | AACAACAAAACTCAGGGTTCCAAACCAGATGCGGGTACCCCAGGCTTTGTCTTCACCTTATCAAACACATaGAACACTGTACCTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: NNKTQGSKPDAGTPGFVFTLSNT*NTVPSI Trigger: AATAGAAGGTACAGTGTTCCATGTGTTTGATAAGGT...GAAGACAAAGCCTGGGGTACCCGCATCTGGTTTGGAACCCTGAGTTTTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CAA 72 bp | AGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTaGCTGGAATTTGAACTCAGGTCCTTCGTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHYKWLCATMW*LEFELRSFVQK Trigger: CTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGCCCGACATGGTATTGAAACTCCTGGAAGCAGAATACAGTTGCCTAACACAGCTCTGTTTAGATaGTTAATTCCCTGTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKARHGIETPGSRIQLPNTALFR*LIPCIS Trigger: ACTTATACAGGGAATTAAGCATCTAAACAGAGCTGT...GTTAGGCAACTGTATTCTGCTTCCAGGAGTTTCAATACCATGTCGGGCCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGACGCAGAAGCCTGTCTaGTTTCTATCCGAATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKESAKDLAVSVLICKFLTQKPV*FLSEFV Trigger: CACGAATTCGGATAGAAACCAGACAGGCTTCTGCGT...CAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGTCTGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTGCATCATACAGCGAGTaGCCAGTATCCTTAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGVCKYALHFVAVESLDVASYSE*PVSLIE Trigger: CTCTATTAAGGATACTGGCCACTCGCTGTATGATGC...AACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| 3UTR CAA 72 bp | GTAAAGAGATGTCTTCTTGACTCCTTAATATCAGACTaGGAAAGCATGCCACAATACGGTCTCCAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKRCLLDSLISD*ESMPQYGLQFL Trigger: AAGGAACTGGAGACCGTATTGTGGCATGCTTTCCAAGTCTGATATTAAGGAGTCAAGAAGACATCTCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR CAA 72 bp | CTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTaGAACGTAGCTACTTCTCAAGCTTCCTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFVAVESLDVL*NVATSQASSSF Trigger: GAAAGAAGAGGAAGCTTGAGAAGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227022.2 ENSMUST00000228643.2 |
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| CDS-3UTR GCA 90 bp | AGCCTTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAGGAACCAGATTTTATaGCTTGTTGGAGCTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVCNIRRNIYSWDLWFYRNQIL*LVGACL Trigger: TAAGCAAGCTCCAACAAGGCATAAAATCTGGTTCCT...GTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTCCAAAGAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAAACAGCTCTGTTTAGATaGTTAATTCCCTGTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSKESAKDLAVSVLICKTALFR*LIPCIS Trigger: ACTTATACAGGGAATTAAGCATCTAAACAGAGCTGT...TTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGACCGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR GCA 90 bp | ACCAAATGCCTGTGTATTTGTAAAACCTGTAGCTATATCTACAAATACCTGGGGGCCACAATGTCTTCATaGACAGCTCTGTTTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TKCLCICKTCSYIYKYLGATMSS*TALFRC Trigger: GCATCTAAACAGAGCTGTGCATGAAGACATTGTGGC...CCCCAGGTATTTGTAGATATAGCTACAGGTTTTACAAATACACAGGCATTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR GCA 90 bp | TCCAAAGAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGGCCACAATGTCTTCATaGACAGCTCTGTTTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKESAKDLAVSVLICKFLATMSS*TALFRC Trigger: GCATCTAAACAGAGCTGTGCATGAAGACATTGTGGC...CAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CCA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAATCGAGGACATCAATCTaGTGCAGCAGCACATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYAICPIPQQRTVIHKIESRTSI*CSSTLV Trigger: CACCAATGTGCTGCTGCACCAGATTGATGTCCTCGA...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CCA 90 bp | GCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGTAGCTACTGATTTTATGCCTTGTTaGAGCTTGCTTAAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALHFVAVESLDVLLNVATDFMPC*SLLKGR Trigger: TCTTCCCTTAAGCAAGCTCCAACAAGGCATAAAATC...AGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR GCA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAACAGACTTGGAAAGCATaGCACAATACGGTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYAICPIPQQRTVIHKIEQTWKA*HNTVSS Trigger: ACTGGAGACCGTATTGTGGCATGCTTTCCAAGTCTG...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CCA 90 bp | ACAGGAGTCTGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTGATTTTATGCCTTGTTaGAGCTTGCTTAAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGVCKYALHFVAVESLDVDFMPC*SLLKGR Trigger: TCTTCCCTTAAGCAAGCTCCAACAAGGCATAAAATC...AACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS-3UTR CCA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAAACGCAGAAGCCTGTCTaGTTTCTATCCGAATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYAICPIPQQRTVIHKIETQKPV*FLSEFV Trigger: CACGAATTCGGATAGAAACCAGACAGGCTTCTGCGT...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| 3UTR CAA 72 bp | CTCCAAATAATTTTCCCTGCTAGCTCTGAATGTTCCTaGAAGATAGGAACCAGATTTTATGCCTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQIIFPASSECS*KIGTRFYALLE Trigger: CTCCAACAAGGCATAAAATCTGGTTCCTATCTTCAAGGAACATTCAGAGCTAGCAGGGAAAATTATTTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| 3UTR CAA 72 bp | ACAAAGATAAACAGTTGTTCCTCTTCTTGCAGATTCTaGATCCAACGCATTTCCTGGCCTGATAAAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKINSCSSSCRF*IQRISWPDKMA Trigger: AGCCATTTTATCAGGCCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAGAGGAACAACTGTTTATCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| CDS-3UTR GCA 90 bp | ACCAAATGCCTGTGTATTTGTAAAACCTGTAGCTATATCTACAAATACCTGGGGAGGAACCAGATTTTATaGCTTGTTGGAGCTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TKCLCICKTCSYIYKYLGRNQIL*LVGACL Trigger: TAAGCAAGCTCCAACAAGGCATAAAATCTGGTTCCT...CCCCAGGTATTTGTAGATATAGCTACAGGTTTTACAAATACACAGGCATTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS GCA 90 bp | ACAATGACATTTCTGATGGCCGGGTGTTCGAGGACATCAATAAGCTaGCTGGGGGTCGCAATCTGGAGGCCACAGAAGCCCAGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TMTFLMAGCSRTSIS*LGVAIWRPQKPRSP Trigger: CGGGGACCTGGGCTTCTGTGGCCTCCAGATTGCGACCCCCAGGCAGCTTATTGATGTCCTCGAACACCCGGCCATCAGAAATGTCATTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
||
| CDS GCA 90 bp | ACTGTCTGCTGCCACCCTCTTCAGGTGCTCGTTGTACCACTTCGCTaGGACTCGGATGGCTCTGTCATTCCTGTCATTGGCATTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVCCHPLQVLVVPLR*DSDGSVIPVIGILS Trigger: GGAGAGAATGCCAATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGCAGCAGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS GCA 90 bp | CTTCCTGTCATTGGTTATCAGGATAACTTGCAGCTGACTGTCTGCTaGCACCCTCTTCAGGTGCTCGTTGTACCACTTCGCTGCGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPVIGYQDNLQLTVC*HPLQVLVVPLRCDS Trigger: CGAGTCGCAGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAATGACAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS GCA 90 bp | GTTCTTCCTGTCATTGGTTATCAGGATAACTTGCAGCTGACTGTCTaGTGCCACCCTCTTCAGGTGCTCGTTGTACCACTTCGCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLPVIGYQDNLQLTV*CHPLQVLVVPLRCD Trigger: GTCGCAGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAATGACAGGAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS CCA 90 bp | TGTACCACTTCGCTGCGACTCGGATGGCTCTGTCATTCCTGTCATTaGCATTCTCTCCCTGCTCTTGCTCGATGTAGGTTTCTTTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CTTSLRLGWLCHSCH*HSLPALARCRFLYG Trigger: ACCATAAAGAAACCTACATCGAGCAAGAGCAGGGAGAGAATGCCAATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGAAGTGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCTTAGCTCTGTCATTCCTGTCATaGGCATTCTCTCCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRINLRSSGRVASACLLALSFLS*AFSPCS Trigger: AGAGCAGGGAGAGAATGCCAATGACAGGAATGACAG...AGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CAA 90 bp | AAGCTTGTGTTTGTCTGTCAACTCAGGGTAAGTACAGTCAGCCCCAATCGCCACCTGTCATTCCTGTCATaGGCATTCTCTCCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLVFVCQLRVSTVSPNRHLSFLS*AFSPCS Trigger: AGAGCAGGGAGAGAATGCCAATGACAGGAATGACAG...GTGGCGATTGGGGCTGACTGTACTTACCCTGAGTTGACAGACAAACACAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTTCTTCCTTGCCGGGCAGTGGTGGCAACACTTTTAATCCCAGCACTTGAGTGCTTTTCCTGGTTATaGGTCACATCCCTGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLPCRAVVATLLIPALECFSWL*VTSLIR Trigger: GCGAATCAGGGATGTGACCAATAACCAGGAAAAGCA...CTCAAGTGCTGGGATTAAAAGTGTTGCCACCACTGCCCGGCAAGGAAGAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCTTTGTCTTCCTATAGCCCTGCAACACTCACAACGGAGGACCACGGTATCCTTAATATCAGACTaGGAAAGCATGCCACAATAC | + |
|
Preference number: 5 (lower is better) Translates to: PRLCLPIALQHSQRRTTVSLISD*ESMPQY Trigger: GTATTGTGGCATGCTTTCCAAGTCTGATATTAAGGA...TACCGTGGTCCTCCGTTGTGAGTGTTGCAGGGCTATAGGAAGACAAAGCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CAA 90 bp | CCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCTTGCCTCTTAGCTCTTCCACCATGGAATTaGTTTCTCTCAGCTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRINLRSSGRVASACLLALPPWN*FLSALS Trigger: CGAAAGAGCTGAGAGAAACAAATTCCATGGTGGAAG...AGCTAAGAGGCAAGCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CAA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGGCAGAAGTACACAGCTaGCATCATACAGCGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLISLGFVRQGQSGTPNEAEVHS*HHTASG Trigger: GCCACTCGCTGTATGATGCAAGCTGTGTACTTCTGC...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGCTTGCATCATACAGCGAGTGGCCAGTATCCTTAATAGAGTATTCAGGGGCTGGTATCCCCTCTaGCACAGCTTTCTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YTACIIQRVASILNRVFRGWYPL*HSFLFV Trigger: AACAAAGAGAAAGCTGTGCAAGAGGGGATACCAGCC...CCTGAATACTCTATTAAGGATACTGGCCACTCGCTGTATGATGCAAGCTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LITNGCVLPCGCWNLNSGLKEQR*ELSNSG Trigger: TCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAG...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | AGCCTTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SLVCNIRRNIYSWDLWFYLKEQR*ELSNSG Trigger: TCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAG...GTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | CATCATGTCAGTGCCAAGAATCAACCTGAGATCCTCTGGAAGAGTAGCCAGTGCAAGCAAGGCGTGGCTTaGGTTTATCTTTTTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: HHVSAKNQPEILWKSSQCKQGVA*VYLFLQ Trigger: TTGAAGAAAAAGATAAACCAAAGCCACGCCTTGCTT...GCACTGGCTACTCTTCCAGAGGATCTCAGGTTGATTCTTGGCACTGACATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | TCAGATCTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACGGCTGGTATCCCCTCTaGCACAGCTTTCTCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SDLITNGCVLPCGCWNLNGWYPL*HSFLFV Trigger: AACAAAGAGAAAGCTGTGCAAGAGGGGATACCAGCC...GTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAGATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | GCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTCTGTTGAACGTAGCTACTACCTCCAAGTTTCCATaGCTGAGCTCTCTACAATGC | + |
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Preference number: 5 (lower is better) Translates to: ALHFVAVESLDVLLNVATTSKFP*LSSLQC Trigger: GCATTGTAGAGAGCTCAGCAATGGAAACTTGGAGGT...AGTAGCTACGTTCAACAGAACATCCAAAGACTCAACAGCAACAAAATGGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | TTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCCTTCGTTCAGAAGGAGTCGGCCAAAGATTaGGCTGTATCAGTCTTAATT | + |
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Preference number: 5 (lower is better) Translates to: LCATMWLLEFELRSFVQKESAKD*AVSVLI Trigger: AATTAAGACTGATACAGCCAAATCTTTGGCCGACTC...CTTCTGAACGAAGGACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | TTTAGCCAGCTGATTGAGTCCACGGAGACTAGTGGTAATATCATCATTCATAGCAGAAGCCTGTCAACGTaGGATCTTAAGGAACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FSQLIESTETSGNIIIHSRSLST*DLKEQR Trigger: CCTCTGTTCCTTAAGATCCAACGTTGACAGGCTTCT...GCTATGAATGATGATATTACCACTAGTCTCCGTGGACTCAATCAGCTGGCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS TCA 90 bp | AGAGAAGCCTGTCAACGTTGGATCTTAAGGAACAGAGGTTGGAGCTaGGCAACTCTGGAACCATGTCAATCCTCTTTTCACAAAGATAAA | + |
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Preference number: 5 (lower is better) Translates to: REACQRWILRNRGWS*ATLEPCQSSFHKDK Trigger: TTTATCTTTGTGAAAAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTGCAACATTAGGAGGAATATTTATTCCTGGGATCTGTGGTTCTACAAGGTGCTTTTCCTGGTTATaGGTCACATCCCTGATTCGC | + |
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Preference number: 5 (lower is better) Translates to: LSATLGGIFIPGICGSTRCFSWL*VTSLIR Trigger: GCGAATCAGGGATGTGACCAATAACCAGGAAAAGCA...CCTTGTAGAACCACAGATCCCAGGAATAAATATTCCTCCTAATGTTGCAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | CAATTAATCAGTCTGGGATTTGTAAGACAGGGGCAATCTGGCACACCAAATGAGTGCACAGCTTTCTCTTaGTTCTTCCTGTCATTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QLISLGFVRQGQSGTPNECTAFS*FFLSLV Trigger: AACCAATGACAGGAAGAACAAAGAGAAAGCTGTGCA...CTCATTTGGTGTGCCAGATTGCCCCTGTCTTACAAATCCCAGACTGATTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | ACAGGAGTCTGTAAGTATGCTCTCCATTTTGTTGCTGTTGAGTCTTTGGATGTTACCTCCAAGTTTCCATaGCTGAGCTCTCTACAATGC | + |
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Preference number: 5 (lower is better) Translates to: TGVCKYALHFVAVESLDVTSKFP*LSSLQC Trigger: GCATTGTAGAGAGCTCAGCAATGGAAACTTGGAGGT...AACATCCAAAGACTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAGAGTCGGCCAAAGATTTGGCTGTATCAGTCTTAATTTGCAAATTCTTGTCTTCTTGCAGATTCTaGATCCAACGCATTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SKESAKDLAVSVLICKFLSSCRF*IQRISW Trigger: CCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAGA...CAAGAATTTGCAAATTAAGACTGATACAGCCAAATCTTTGGCCGACTCTTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAAGCCAACCTGTCAACGTaGGATCTTAAGGAACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LYAICPIPQQRTVIHKIEANLST*DLKEQR Trigger: CCTCTGTTCCTTAAGATCCAACGTTGACAGGTTGGC...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAAATGCCTTGTTGGAGCTaGCTTAAGGGAAGATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LYAICPIPQQRTVIHKIEMPCWS*LKGRCS Trigger: AGAGCATCTTCCCTTAAGCAAGCTCCAACAAGGCAT...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | GTACCTTCTAAGCCATACTTTGGAATTAACACCACAATTGCATTTTTCCTTACAATGCCTTGTTGGAGCTaGCTTAAGGGAAGATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VPSKPYFGINTTIAFFLTMPCWS*LKGRCS Trigger: AGAGCATCTTCCCTTAAGCAAGCTCCAACAAGGCAT...TGTAAGGAAAAATGCAATTGTGGTGTTAATTCCAAAGTATGGCTTAGAAGGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS-3UTR CAA 90 bp | CTCATTACAAATGGTTGTGTGCTACCATGTGGTTGCTGGAATTTGAACTCAGGTCATATATCTGAAAGCTaGTGTTTGTCTGTCAACTCA | + |
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Preference number: 5 (lower is better) Translates to: LITNGCVLPCGCWNLNSGHISES*CLSVNS Trigger: TGAGTTGACAGACAAACACAAGCTTTCAGATATATG...ACCTGAGTTCAAATTCCAGCAACCACATGGTAGCACACAACCATTTGTAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | CTGTATGCTATATGCCCGATTCCACAGCAAAGAACTGTTATACATAAAATTGAATCTTCTTGCAGATTCTaGATCCAACGCATTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LYAICPIPQQRTVIHKIESSCRF*IQRISW Trigger: CCAGGAAATGCGTTGGATCAAGAATCTGCAAGAAGA...TTCAATTTTATGTATAACAGTTCTTTGCTGTGGAATCGGGCATATAGCATACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042471.11 |
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| CDS-3UTR CAA 90 bp | GTACCTTCTAAGCCATACTTTGGAATTAACACCACAATTGCATTTTTCCTTACATCCTTAATATCAGACTaGGAAAGCATGCCACAATAC | + |
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Preference number: 5 (lower is better) Translates to: VPSKPYFGINTTIAFFLTSLISD*ESMPQY Trigger: GTATTGTGGCATGCTTTCCAAGTCTGATATTAAGGA...TGTAAGGAAAAATGCAATTGTGGTGTTAATTCCAAAGTATGGCTTAGAAGGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS CCA 72 bp | TCGAGGACATCAATAAGCTGCCTGGGGGTCGCAATCTaGAGGCCACAGAAGCCCAGGTCCCCGGCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRTSISCLGVAI*RPQKPRSPASR Trigger: CCTGGAAGCCGGGGACCTGGGCTTCTGTGGCCTCCAGATTGCGACCCCCAGGCAGCTTATTGATGTCCTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| CDS CCA 72 bp | GGTGTTCGAGGACATCAATCTGGTGCAGCAGCACATTaGTGTCCGGCAGAAGGTAGTGCGGCCACGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GVRGHQSGAAAH*CPAEGSAATGR Trigger: TCTGCCCGTGGCCGCACTACCTTCTGCCGGACACCAATGTGCTGCTGCACCAGATTGATGTCCTCGAACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS GCA 72 bp | TTTCTGATGGCCGGGTGTTCGAGGACATCAATAAGCTaGCTGGGGGTCGCAATCTGGAGGCCACAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FLMAGCSRTSIS*LGVAIWRPQKP Trigger: GGGCTTCTGTGGCCTCCAGATTGCGACCCCCAGGCAGCTTATTGATGTCCTCGAACACCCGGCCATCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227022.2 |
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| CDS GCA 72 bp | TGCCACCCTCTTCAGGTGCTCGTTGTACCACTTCGCTaGGACTCGGATGGCTCTGTCATTCCTGTCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: CHPLQVLVVPLR*DSDGSVIPVIG Trigger: GCCAATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CCA 72 bp | TCAGGTGCTCGTTGTACCACTTCGCTGCGACTCGGATaGCTCTGTCATTCCTGTCATTGGCATTCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SGARCTTSLRLG*LCHSCHWHSLP Trigger: AGGGAGAGAATGCCAATGACAGGAATGACAGAGCCATCCGAGTCGCAGCGAAGTGGTACAACGAGCACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS GCA 72 bp | ATTGGTTATCAGGATAACTTGCAGCTGACTGTCTGCTaGCACCCTCTTCAGGTGCTCGTTGTACCACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: IGYQDNLQLTVC*HPLQVLVVPLR Trigger: GCGAAGTGGTACAACGAGCACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CAA 72 bp | CTGTGCTTCCGCGTACGTAAGAGAAGCCTGTCAACGTaGGATCTTAAGGAACAGAGGTTGGAGCTGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LCFRVRKRSLST*DLKEQRLELSN Trigger: GTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGCTTCTCTTACGTACGCGGAAGCACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS TCA 72 bp | TTCTTCCTGTCATTGGTTATCAGGATAACTTGCAGCTaGCTGTCTGCTGCCACCCTCTTCAGGTGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FFLSLVIRITCS*LSAATLFRCSL Trigger: CAACGAGCACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAATGACAGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS GCA 72 bp | GTCATTGGTTATCAGGATAACTTGCAGCTGACTGTCTaGTGCCACCCTCTTCAGGTGCTCGTTGTACCACTT | + |
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Preference number: 6 (lower is better) Translates to: VIGYQDNLQLTV*CHPLQVLVVPL Trigger: AAGTGGTACAACGAGCACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CAA 72 bp | CTCTTTGTTCTTCCTGTCATTGGTTATCAGGATAACTaGCAGCTGACTGTCTGCTGCCACCCTCTTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LFVLPVIGYQDN*QLTVCCHPLQV Trigger: CACCTGAAGAGGGTGGCAGCAGACAGTCAGCTGCAAGTTATCCTGATAACCAATGACAGGAAGAACAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CAA 72 bp | AGAAGCCTGTCAACGTTGGATCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGAACCATGTCAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSLSTLDLKEQR*ELSNSGTMSIL Trigger: GAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGCTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS CAA 90 bp | TCGGATGGCTCTGTCATTCCTGTCATTGGCATTCTCTCCCTGCTCTaGCTCGATGTAGGTTTCTTTATGGTGCTCATTAGTGAAGGTATA | + |
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Preference number: 6 (lower is better) Translates to: SDGSVIPVIGILSLL*LDVGFFMVLISEGI Trigger: TATACCTTCACTAATGAGCACCATAAAGAAACCTACATCGAGCAAGAGCAGGGAGAGAATGCCAATGACAGGAATGACAGAGCCATCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CAA 90 bp | GTACGTAAGAGAAGCCTGTCAACGTTGGATCTTAAGGAACAGAGGTaGGAGCTGAGCAACTCTGGAACCATGTCAATCCTCTTTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: VRKRSLSTLDLKEQR*ELSNSGTMSILFSQ Trigger: TTGTGAAAAGAGGATTGACATGGTTCCAGAGTTGCTCAGCTCCAACCTCTGTTCCTTAAGATCCAACGTTGACAGGCTTCTCTTACGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228643.2 |
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| CDS GCA 72 bp | ACGTATTCTTCACACGTGAAGGCTGGTATCCCCTCTTaGACAGCTTTCTCTTTGTTCTTCCTGTCATTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TYSSHVKAGIPS*TAFSLFFLSLV Trigger: AACCAATGACAGGAAGAACAAAGAGAAAGCTGTGCAAGAGGGGATACCAGCCTTCACGTGTGAAGAATACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CCA 72 bp | AGTCAGGCTCTTTACGTATTCTTCACACGTGAAGGCTaGTATCCCCTCTTGCACAGCTTTCTCTTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQALYVFFTREG*YPLLHSFLFVL Trigger: AAGAACAAAGAGAAAGCTGTGCAAGAGGGGATACCAGCCTTCACGTGTGAAGAATACGTAAAGAGCCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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| CDS CAA 72 bp | TACGTATTCTTCACACGTGAAGGCTGGTATCCCCTCTaGCACAGCTTTCTCTTTGTTCTTCCTGTCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: YVFFTREGWYPL*HSFLFVLPVIG Trigger: ACCAATGACAGGAAGAACAAAGAGAAAGCTGTGCAAGAGGGGATACCAGCCTTCACGTGTGAAGAATACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042471.11 ENSMUST00000228643.2 |
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