Pregenerated sensors for DIRAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047842Ensembl transcript IDs: ENSMUST00000057442.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAACACCCCAGCATTaGGACCTCTGCCCACTGGCCATGCCTGCTGGCCATGAGAGTACT | + |
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Preference number: 1 (lower is better) Translates to: RRLWWSKRPTKTPQH*DLCPLAMPAGHEST Trigger: AGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGTGTTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR TCA 90 bp | ACCCCAGCATTGGGACCTCTGCCCACTGGCCATGCCTGCTGGCCATaGGAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACC | + |
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Preference number: 1 (lower is better) Translates to: TPALGPLPTGHACWP*EYCIGSHSATASST Trigger: GGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | GTGTGTCGCAGCCAAATGCAATGTTTAACACACGGGCATCGGACATaGTGCCCTGACGACAGTGGGGGTTCACAGAGGGGAGGAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VCRSQMQCLTHGHRT*CPDDSGGSQRGGRE Trigger: CTCTCTTCCTCCCCTCTGTGAACCCCCACTGTCGTCAGGGCAGCATGTCCGATGCCCGTGTGTTAAACATTGCATTTGGCTGCGACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | ACTCAGAGTGGGTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTTaGTTGGTTCCTGGGCTTCCTCATTTCTCAGTGTGGCTGCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: TQSGFGWGTRAPGSS*LVPGLPHFSVWLLA Trigger: GGCAAGCAGCCACACTGAGAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTTGCTTGGTTCCTaGGCTTCCTCATTTCTCAGTGTGGCTGCTTGCCCAGATAACCCC | + |
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Preference number: 1 (lower is better) Translates to: VWMGHKGSRLFLLGS*ASSFLSVAACPDNP Trigger: GGGGTTATCTGGGCAAGCAGCCACACTGAGAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | AGAGTGGGTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTTGCTTaGTTCCTGGGCTTCCTCATTTCTCAGTGTGGCTGCTTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RVGLDGAQGLQALLA*FLGFLISQCGCLPR Trigger: TCTGGGCAAGCAGCCACACTGAGAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TTAGATGCCTGCCCATGGCTTGTCACTGAATGGAGAGGGGACCAGTaGGGATTAGGGAGCTCATGGAGTCCCGTGCTTAACCCCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: LDACPWLVTEWRGDQ*GLGSSWSPVLNPRV Trigger: CACTCTGGGGTTAAGCACGGGACTCCATGAGCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | CAGCTTCATGACTTGGGCTGGGACCAAAGCAAAGCTGAAAGCCACTaGCCCGATAGTACTGTGTCCTCAGCCCCTGAGTCAGAGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: QLHDLGWDQSKAESH*PDSTVSSAPESEGS Trigger: ACTTCCCTCTGACTCAGGGGCTGAGGACACAGTACTATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTCATGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GTTGGACTTGATGCATTAGATGCCTGCCCATGGCTTGTCACTGAATaGAGAGGGGACCAGTGGGGATTAGGGAGCTCATGGAGTCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: VGLDALDACPWLVTE*RGDQWGLGSSWSPV Trigger: CACGGGACTCCATGAGCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATCAAGTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GCTCTGAGTCCCCTCATCTTCAAATGGCTAAAGCCCACTCAGGACTaGCCTCAGCTTCCTGGGATGCTAAGATGCATCGCAGGTTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: ALSPLIFKWLKPTQD*PQLPGMLRCIAGSA Trigger: TGCAGAACCTGCGATGCATCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAAGATGAGGGGACTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | CCACTGGGAACAAATGGGGAAGATAGAAGAGACTCAGAGTGGGTTTaGATGGGGCACAAGGGCTCCAGGCTCTTCTTGCTTGGTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLGTNGEDRRDSEWV*MGHKGSRLFLLGSW Trigger: CCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTGAGTCTCTTCTATCTTCCCCATTTGTTCCCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TGGGAACAAATGGGGAAGATAGAAGAGACTCAGAGTGGGTTTGGATaGGGCACAAGGGCTCCAGGCTCTTCTTGCTTGGTTCCTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: WEQMGKIEETQSGFG*GTRAPGSSCLVPGL Trigger: AAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTGAGTCTCTTCTATCTTCCCCATTTGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GAATGGCCACTGGGAACAAATGGGGAAGATAGAAGAGACTCAGAGTaGGTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTTGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: EWPLGTNGEDRRDSE*VWMGHKGSRLFLLG Trigger: ACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTGAGTCTCTTCTATCTTCCCCATTTGTTCCCAGTGGCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | CAAGGTGATCCTCGTAACCACAGAGTAGTTAGACACACCCAGAAATaGAACCGAAACAGCAAGGGCTGCAGTGGAAGCATGTGCCGGCGT | + |
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Preference number: 1 (lower is better) Translates to: QGDPRNHRVVRHTQK*NRNSKGCSGSMCRR Trigger: ACGCCGGCACATGCTTCCACTGCAGCCCTTGCTGTTTCGGTTCCATTTCTGGGTGTGTCTAACTACTCTGTGGTTACGAGGATCACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR TCA 90 bp | GAGAGGGCCAGACTGAATTATAGAGGTCTGAAGGAAGCAAGTGTTTaGACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGAC | + |
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Preference number: 1 (lower is better) Translates to: ERARLNYRGLKEASV*TQCASEALVEQEAD Trigger: GTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACACTTGCTTCCTTCAGACCTCTATAATTCAGTCTGGCCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | CTCACGGGAACCACTGGGATCCACAGGTCCAACTGGTTTCTCATCTaGCTGCCTACTCCTCCCCCAAAGATGTTAGTGACTTCTGAACTA | + |
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Preference number: 1 (lower is better) Translates to: LTGTTGIHRSNWFLI*LPTPPPKMLVTSEL Trigger: TAGTTCAGAAGTCACTAACATCTTTGGGGGAGGAGTAGGCAGGCAGATGAGAAACCAGTTGGACCTGTGGATCCCAGTGGTTCCCGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TGTGCCCAGGAAAGAGAGATTAGCCCAACCTATCTGCAGCCACTGTaGCCACTGATCCCTCACGCAGTAGCTATGATTCCTTCTGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: CAQEREISPTYLQPL*PLIPHAVAMIPSEG Trigger: TCCTTCAGAAGGAATCATAGCTACTGCGTGAGGGATCAGTGGCCACAGTGGCTGCAGATAGGTTGGGCTAATCTCTCTTTCCTGGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GGATATTGCTCTTGTGTTGGACTTGATGCATTAGATGCCTGCCCATaGCTTGTCACTGAATGGAGAGGGGACCAGTGGGGATTAGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GYCSCVGLDALDACP*LVTEWRGDQWGLGS Trigger: GCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATCAAGTCCAACACAAGAGCAATATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | ACTAAAAATCCACTCACGGGAACCACTGGGATCCACAGGTCCAACTaGTTTCTCATCTGCCTGCCTACTCCTCCCCCAAAGATGTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: TKNPLTGTTGIHRSN*FLICLPTPPPKMLV Trigger: CACTAACATCTTTGGGGGAGGAGTAGGCAGGCAGATGAGAAACCAGTTGGACCTGTGGATCCCAGTGGTTCCCGTGAGTGGATTTTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TGTGCTTCTGGTTATTTAGACGCTCTTGGTTGGCTGGTTCCCAGCTaGGTACTCGTGGAGTTATTTAAGACAGGAAAACCATCTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: CASGYLDALGWLVPS*VLVELFKTGKPSWG Trigger: CCCCCAAGATGGTTTTCCTGTCTTAAATAACTCCACGAGTACCCAGCTGGGAACCAGCCAACCAAGAGCGTCTAAATAACCAGAAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TGCAATGTAGGATATTACCAAGAGTCTCAGCTTCATGACTTGGGCTaGGACCAAAGCAAAGCTGAAAGCCACTGGCCCGATAGTACTGTG | + |
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Preference number: 1 (lower is better) Translates to: CNVGYYQESQLHDLG*DQSKAESHWPDSTV Trigger: CACAGTACTATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTCATGAAGCTGAGACTCTTGGTAATATCCTACATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | TGCACTCAAAAGTCCTTAGGAGAGGATTGCGTCTGGGCTGCACGTTaGTCTGAGGAACTTTTAAGAGCATTTAGCAAGGAACGAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: CTQKSLGEDCVWAAR*SEELLRAFSKERGE Trigger: TTCTCCTCGTTCCTTGCTAAATGCTCTTAAAAGTTCCTCAGAGCAACGTGCAGCCCAGACGCAATCCTCTCCTAAGGACTTTTGAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | TTAGGAATATGGAAACTGACATACAGGGCTGAAAGAACCCTGATGTaGGGTCACTGGAAACAGGGAATCATGGGGCACAATGCTTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LGIWKLTYRAERTLM*GHWKQGIMGHNACV Trigger: GACACAAGCATTGTGCCCCATGATTCCCTGTTTCCAGTGACCGCACATCAGGGTTCTTTCAGCCCTGTATGTCAGTTTCCATATTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR GCA 90 bp | ACAATTGGATATTGCTCTTGTGTTGGACTTGATGCATTAGATGCCTaGCCATGGCTTGTCACTGAATGGAGAGGGGACCAGTGGGGATTA | + |
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Preference number: 1 (lower is better) Translates to: TIGYCSCVGLDALDA*PWLVTEWRGDQWGL Trigger: TAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATCAAGTCCAACACAAGAGCAATATCCAATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | GACATTCTAGAAAATTCCATAACTCCATCTCACTGTGATAGAGAATaGCCACTGGGAACAAATGGGGAAGATAGAAGAGACTCAGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: DILENSITPSHCDRE*PLGTNGEDRRDSEW Trigger: CCACTCTGAGTCTCTTCTATCTTCCCCATTTGTTCCCAGTGGCCATTCTCTATCACAGTGAGATGGAGTTATGGAATTTTCTAGAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CCA 90 bp | TGGGTGTTTCCAAACAGCTTGAGTAGGAGCGACACGTTACAAACTTaGGGTAGGGAGGAATATCACAGCGCAATTTTAAAATATTTAGTA | + |
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Preference number: 1 (lower is better) Translates to: WVFPNSLSRSDTLQT*GREEYHSAILKYLV Trigger: TACTAAATATTTTAAAATTGCGCTGTGATATTCCTCCCTACCCCAAGTTTGTAACGTGTCGCTCCTACTCAAGCTGTTTGGAAACACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 90 bp | CAGAGTGGGTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTTGCTaGGTTCCTGGGCTTCCTCATTTCTCAGTGTGGCTGCTTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QSGFGWGTRAPGSSC*VPGLPHFSVWLLAQ Trigger: CTGGGCAAGCAGCCACACTGAGAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 90 bp | GACTCAGAGTGGGTTTGGATGGGGCACAAGGGCTCCAGGCTCTTCTaGCTTGGTTCCTGGGCTTCCTCATTTCTCAGTGTGGCTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: DSEWVWMGHKGSRLF*LGSWASSFLSVAAC Trigger: GCAAGCAGCCACACTGAGAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAACCCACTCTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTGGTCTATCTGCAGCCACTGTaGCCACTGATCCCTCACGCA | + |
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Preference number: 2 (lower is better) Translates to: EYCIGSHSATASSTCGLVYLQPL*PLIPHA Trigger: TGCGTGAGGGATCAGTGGCCACAGTGGCTGCAGATA...GACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGAGTGCTTCGGAGGCTTTaGTGGAGCAAGAGGCCGACC | + |
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Preference number: 2 (lower is better) Translates to: HLPPSKLTDSIERSKDCGVLRRL*WSKRPT Trigger: GGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCAC...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGCATAGAGAGGAGCAAAGACTGTGGATGGAGCTATAGCAAGATCCTCGTGTCTGCCCACTGGCCATaGCTGCTGGCCATGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: DSIERSKDCGWSYSKILVSAHWP*LLAMRV Trigger: TACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGA...CACGAGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGAGCTGACACAGCATCATaGCACAAGTGGCCTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: HLPPSKLTDSIERSKDCGADTAS*HKWPWH Trigger: ATGCCAAGGCCACTTGTGGCATGATGCTGTGTCAGC...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | AACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAACACCCCCCCAAGACCAGCATGTaGCTTCTCATTGACTATAGA | + |
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Preference number: 2 (lower is better) Translates to: NTVCFGGFGGARGRPKHPPKTSM*LLIDYR Trigger: TCTATAGTCAATGAGAAGGCACATGCTGGTCTTGGG...GGGGTGTTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGAACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAATTAGACGCTCTTGGTTaGCTGGTTCCCAGCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: CLNTVCFGGFGGARGRPKLDALG*LVPSWV Trigger: TACCCAGCTGGGAACCAGCCAACCAAGAGCGTCTAA...TTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAACACCAGGGTGAGTTATaGTTGGCAGAGCAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GVLPIGVPYAPLALGVSKHQGEL*LAEQRG Trigger: CCCTCTCTGCTCTGCCAATCATAACTCACCCTGGTG...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTGGTCCCAGCTGGGTACTCGTaGAGTTATTTAAGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EYCIGSHSATASSTCGLVPAGYS*SYLRQE Trigger: TTCCTGTCTTAAATAACTCCACGAGTACCCAGCTGG...GACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 90 bp | CCCATGTGCAATGTAGGATATTACCAAGAGTCTCAGCTTCATGACTaGGGCTGGGACCAAAGCAAAGCTGAAAGCCACTGGCCCGATAGT | + |
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Preference number: 2 (lower is better) Translates to: PMCNVGYYQESQLHD*GWDQSKAESHWPDS Trigger: ACTATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTCATGAAGCTGAGACTCTTGGTAATATCCTACATTGCACATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGACTGAAGGATACGGGGTaGACTCAAAAGTCCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: HLPPSKLTDSIERSKDCGLKDTG*TQKSLG Trigger: TCCTAAGGACTTTTGAGTGCACCCCGTATCCTTCAG...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGCCGGCGTCTCACATGCCAATGATCACTCTGATCACAGATGCTTGATTCAGGCTCTTCTTGCTTaGTTCCTGGGCTTCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: ACAGVSHANDHSDHRCLIQALLA*FLGFLI Trigger: AATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTG...AATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCACTGATCCCTCACGCAGTAGCTATGATTCCTTCTGAAGGATACGGGGTGAAACTGAAGAAATGCTaGCACAGCATCATGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: WPLIPHAVAMIPSEGYGVKLKKC*HSIMPQ Trigger: TTGTGGCATGATGCTGTGTCAGCATTTCTTCAGTTT...CACCCCGTATCCTTCAGAAGGAATCATAGCTACTGCGTGAGGGATCAGTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAACCTGGGATGCTAAGATaGATCGCAGGTTCTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: GVLPIGVPYAPLALGVSKPGMLR*IAGSAS Trigger: AGATGCAGAACCTGCGATGCATCTTAGCATCCCAGG...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAACCTCATTTCTCAGTGTaGCTGCTTGCCCAGATAACC | + |
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Preference number: 2 (lower is better) Translates to: GVLPIGVPYAPLALGVSKPHFSV*LLAQIT Trigger: GGTTATCTGGGCAAGCAGCCACACTGAGAAATGAGG...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTTAAAAATCAGAGGGCTGCAAGAAGTGGCAACCCTCGAAGGTCAGAAGGCCTCTGAAGGACATTaGAGGGTGTGTCGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: FYLKIRGLQEVATLEGQKASEGH*RVCRSQ Trigger: TTGGCTGCGACACACCCTGCAATGTCCTTCAGAGGC...CTTCTGACCTTCGAGGGTTGCCACTTCTTGCAGCCCTCTGATTTTTAAATAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGGCAGAGCAGAGAGGGCCAGACTGAATTATAGAGGTCTGAAGGAAGCAAGTTGGTCAGTGGTAAGATaGCTTAGAGAATGGTCGAGC | + |
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Preference number: 2 (lower is better) Translates to: IGRAERARLNYRGLKEASWSVVR*LREWSS Trigger: GCTCGACCATTCTCTAAGCCATCTTACCACTGACCA...ACTTGCTTCCTTCAGACCTCTATAATTCAGTCTGGCCCTCTCTGCTCTGCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTCACTGTGATAGAGAATGGCCACTGGGAACAAATGGGGAAGATAGAAGATGTTAGTGACTTCTaGACTAAGCTGCCTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: LHLTVIENGHWEQMGKIEDVSDF*TKLPDA Trigger: TGCATCAGGCAGCTTAGTTCAGAAGTCACTAACATC...TTCTATCTTCCCCATTTGTTCCCAGTGGCCATTCTCTATCACAGTGAGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR TCA 90 bp | GCATGTGCCGGCGTCTCACATGCCAATGATCACTCTGATCACAGATGCTTGATTGTGATATGTTTTCTCTaGGAGGAGAAATGGAACAAC | + |
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Preference number: 2 (lower is better) Translates to: ACAGVSHANDHSDHRCLIVICFL*EEKWNN Trigger: GTTGTTCCATTTCTCCTCTCAGAGAAAACATATCAC...AATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGAACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAACACACACATACAGGGTaGTTATTGCAATGTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: CLNTVCFGGFGGARGRPKHTHTG*LLQCLH Trigger: ATGTAAACATTGCAATAACCACCCTGTATGTGTGTG...TTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATGTGCCGGCGTCTCACATGCCAATGATCACTCTGATCACAGATGCTTGATTAAATGGATGTGCTTCTaGTTATTTAGACGCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ACAGVSHANDHSDHRCLIKWMCF*LFRRSW Trigger: CCAAGAGCGTCTAAATAACCAGAAGCACATCCATTT...AATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAAGATCTAGTGGACAATTaGATATTGCTCTTGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GVLPIGVPYAPLALGVSKDLVDN*ILLLCW Trigger: CCAACACAAGAGCAATATCCAATTGTCCACTAGATC...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAACTTAGATGGGGGTTATaGTATTTTGTCTTTAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: GVLPIGVPYAPLALGVSKLRWGL*YFVFNP Trigger: GGGATTAAAGACAAAATACCATAACCCCCATCTAAG...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTTCATCCACAGAGCAGTaGTCTTTCCCTCGCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSKILVSMKTETLRNMETSSTEQ*SFPRCS Trigger: GGAACAGCGAGGGAAAGACCACTGCTCTGTGGATGA...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR GCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTTATAGGCTCACACAGTaGTACAGCCTCCTCTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSKILVSMKTETLRNMETYRLTQ*YSLLYL Trigger: CAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATA...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTCCCCTCATCTTCAAATaGCTAAAGCCCACTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YSKILVSMKTETLRNMETPLIFK*LKPTQD Trigger: GTCCTGAGTGGGCTTTAGCCATTTGAAGATGAGGGG...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTAGAAGAGACTCAGAGTaGGTTTGGATGGGGCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSKILVSMKTETLRNMETRRDSE*VWMGHK Trigger: CTTGTGCCCCATCCAAACCCACTCTGAGTCTCTTCT...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTGGCTGCACGTTGCTCTaGGGAACTTTTAAGAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: YSKILVSMKTETLRNMETGCTLL*GTFKSI Trigger: AATGCTCTTAAAAGTTCCTCAGAGCAACGTGCAGCC...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | AAGAGGCCGACCAAAACACCCCAGCATTGGGACCTCTaGCCACTGGCCATGCCTGCTGGCCATGAGAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: KRPTKTPQHWDL*PLAMPAGHEST Trigger: AGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGTGTTTTGGTCGGCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CCACTCACGGGAACCACTGGGATCCACAGGTCCAACTaGTTTCTCATCTGCCTGCCTACTCCTCCCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLTGTTGIHRSN*FLICLPTPPPK Trigger: CTTTGGGGGAGGAGTAGGCAGGCAGATGAGAAACCAGTTGGACCTGTGGATCCCAGTGGTTCCCGTGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CGACCAAAACACCCCAGCATTGGGACCTCTGCCCACTaGCCATGCCTGCTGGCCATGAGAGTACTGTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPKHPSIGTSAH*PCLLAMRVLYR Trigger: CCTATACAGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGTGTTTTGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | GCAATGTTTAACACACGGGCATCGGACATGCTGCCCTaGCGACAGTGGGGGTTCACAGAGGGGAGGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AMFNTRASDMLP*RQWGFTEGRKR Trigger: TCTCTTCCTCCCCTCTGTGAACCCCCACTGTCGTCAGGGCAGCATGTCCGATGCCCGTGTGTTAAACATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | AAACACCCCAGCATTGGGACCTCTGCCCACTGGCCATaGCTGCTGGCCATGAGAGTACTGTATAGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KHPSIGTSAHWP*LLAMRVLYRLT Trigger: TGTGAGCCTATACAGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CCTGCGGACTGGTCAGTGGTAAGATGGCTTAGAGAATaGTCGAGCTGGCACCCAAGACCAGCATGTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PADWSVVRWLRE*SSWHPRPACAF Trigger: GAAGGCACATGCTGGTCTTGGGTGCCAGCTCGACCATTCTCTAAGCCATCTTACCACTGACCAGTCCGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GACTTGGGCTGGGACCAAAGCAAAGCTGAAAGCCACTaGCCCGATAGTACTGTGTCCTCAGCCCCTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLGWDQSKAESH*PDSTVSSAPES Trigger: TGACTCAGGGGCTGAGGACACAGTACTATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | TGCCCATGGCTTGTCACTGAATGGAGAGGGGACCAGTaGGGATTAGGGAGCTCATGGAGTCCCGTGCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: CPWLVTEWRGDQ*GLGSSWSPVLN Trigger: GTTAAGCACGGGACTCCATGAGCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | CAAATGCAATGTTTAACACACGGGCATCGGACATGCTaGCCTGACGACAGTGGGGGTTCACAGAGGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QMQCLTHGHRTC*PDDSGGSQRGG Trigger: TCCTCCCCTCTGTGAACCCCCACTGTCGTCAGGGCAGCATGTCCGATGCCCGTGTGTTAAACATTGCATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | AGCCAAATGCAATGTTTAACACACGGGCATCGGACATaGTGCCCTGACGACAGTGGGGGTTCACAGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQMQCLTHGHRT*CPDDSGGSQRG Trigger: TCCCCTCTGTGAACCCCCACTGTCGTCAGGGCAGCATGTCCGATGCCCGTGTGTTAAACATTGCATTTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | AGACACACCCAGAAATGGAACCGAAACAGCAAGGGCTaGAGTGGAAGCATGTGCCGGCGTCTCACATGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RHTQKWNRNSKG*SGSMCRRLTCQ Trigger: TTGGCATGTGAGACGCCGGCACATGCTTCCACTGCAGCCCTTGCTGTTTCGGTTCCATTTCTGGGTGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | ATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTaGGATGCTAAGATGCATCGCAGGTTCTGCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MAKAHSGLASAS*DAKMHRRFCIS Trigger: GGAGATGCAGAACCTGCGATGCATCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CCTGTGTCCACAGCTCTGAGTCCCCTCATCTTCAAATaGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PVSTALSPLIFK*LKPTQDWPQLP Trigger: AGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAAGATGAGGGGACTCAGAGCTGTGGACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTaGTCAGTGGTAAGATGGCTTAGAGAATGGTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AHTVLQPPLPAD*SVVRWLREWSS Trigger: GCTCGACCATTCTCTAAGCCATCTTACCACTGACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GATGCATTAGATGCCTGCCCATGGCTTGTCACTGAATaGAGAGGGGACCAGTGGGGATTAGGGAGCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: DALDACPWLVTE*RGDQWGLGSSW Trigger: CCATGAGCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CACCCAGAAATGGAACCGAAACAGCAAGGGCTGCAGTaGAAGCATGTGCCGGCGTCTCACATGCCAATGATC | + |
|
Preference number: 3 (lower is better) Translates to: HPEMEPKQQGLQ*KHVPASHMPMI Trigger: GATCATTGGCATGTGAGACGCCGGCACATGCTTCCACTGCAGCCCTTGCTGTTTCGGTTCCATTTCTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | AAGGAGATGGTAAGATTGCTGAGGCATACGGTTTTCTaGGGGAACTCCCTGGCCCTCAGCACATCACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KEMVRLLRHTVF*GNSLALSTSPG Trigger: CCCTGGTGATGTGCTGAGGGCCAGGGAGTTCCCTCAGAAAACCGTATGCCTCAGCAATCTTACCATCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | TCTTGTGTTGGACTTGATGCATTAGATGCCTGCCCATaGCTTGTCACTGAATGGAGAGGGGACCAGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCVGLDALDACP*LVTEWRGDQWG Trigger: TCCCCACTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATCAAGTCCAACACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | ACGCTCTTGGTTGGCTGGTTCCCAGCTGGGTACTCGTaGAGTTATTTAAGACAGGAAAACCATCTTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLLVGWFPAGYS*SYLRQENHLGG Trigger: TCCCCCAAGATGGTTTTCCTGTCTTAAATAACTCCACGAGTACCCAGCTGGGAACCAGCCAACCAAGAGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GAAAGAGAGATTAGCCCAACCTATCTGCAGCCACTGTaGCCACTGATCCCTCACGCAGTAGCTATGATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EREISPTYLQPL*PLIPHAVAMIP Trigger: AGGAATCATAGCTACTGCGTGAGGGATCAGTGGCCACAGTGGCTGCAGATAGGTTGGGCTAATCTCTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | ACATACAGGGCTGAAAGAACCCTGATGTGCGGTCACTaGAAACAGGGAATCATGGGGCACAATGCTTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TYRAERTLMCGH*KQGIMGHNACV Trigger: GACACAAGCATTGTGCCCCATGATTCCCTGTTTCCAGTGACCGCACATCAGGGTTCTTTCAGCCCTGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GGATATTACCAAGAGTCTCAGCTTCATGACTTGGGCTaGGACCAAAGCAAAGCTGAAAGCCACTGGCCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: GYYQESQLHDLG*DQSKAESHWPD Trigger: ATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTCATGAAGCTGAGACTCTTGGTAATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CCTCGTAACCACAGAGTAGTTAGACACACCCAGAAATaGAACCGAAACAGCAAGGGCTGCAGTGGAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PRNHRVVRHTQK*NRNSKGCSGSM Trigger: CATGCTTCCACTGCAGCCCTTGCTGTTTCGGTTCCATTTCTGGGTGTGTCTAACTACTCTGTGGTTACGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | ATATGCCCCTTTGGCTTTGGGTGTTTCCAAACAGCTTaGGTAGGAGCGACACGTTACAAACTTGGGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ICPFGFGCFQTA*VGATRYKLGVG Trigger: CCCTACCCCAAGTTTGTAACGTGTCGCTCCTACTCAAGCTGTTTGGAAACACCCAAAGCCAAAGGGGCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | CCTCCCCCAAAGATGTTAGTGACTTCTGAACTAAGCTaGCTGATGCAGGATGGTACTGGTAGCCATGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PPPKMLVTSELS*LMQDGTGSHGL Trigger: TAGACCATGGCTACCAGTACCATCCTGCATCAGGCAGCTTAGTTCAGAAGTCACTAACATCTTTGGGGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | TGGAAACTGACATACAGGGCTGAAAGAACCCTGATGTaGGGTCACTGGAAACAGGGAATCATGGGGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: WKLTYRAERTLM*GHWKQGIMGHN Trigger: ATTGTGCCCCATGATTCCCTGTTTCCAGTGACCGCACATCAGGGTTCTTTCAGCCCTGTATGTCAGTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | TATTGCTCTTGTGTTGGACTTGATGCATTAGATGCCTaGCCATGGCTTGTCACTGAATGGAGAGGGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: YCSCVGLDALDA*PWLVTEWRGDQ Trigger: CTGGTCCCCTCTCCATTCAGTGACAAGCCATGGGCAGGCATCTAATGCATCAAGTCCAACACAAGAGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CAA 90 bp | AACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAACACCCCGGGGGTTATGGTATTTaGTCTTTAATCCCACTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTVCFGGFGGARGRPKHPGGYGI*SLIPLK Trigger: TTTTAGTGGGATTAAAGACAAAATACCATAACCCCC...GGGGTGTTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | GGCGTCTCACATGCCAATGATCACTCTGATCACAGATaGTTGATTGACACAAGGTCTTTGTGGGCCACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVSHANDHSDHR*LIDTRSLWATE Trigger: TTCAGTGGCCCACAAAGACCTTGTGTCAATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCCTTCCTATAGGAGTTCCATATGCCCCTTTGGCTTTGGGTGTTTCCAAAGAAGGAAGCAAGTGTTaGAACACAGTGTGCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVLPIGVPYAPLALGVSKEGSKC*NTVCFG Trigger: TCCGAAGCACACTGTGTTCAAACACTTGCTTCCTTC...TTTGGAAACACCCAAAGCCAAAGGGGCATATGGAACTCCTATAGGAAGGACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | GAAACACTTAGGAATATGGAAACTGACATACAGGGCTaGAAGAACCCTGATGTGCGGTCACTGGAAACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETLRNMETDIQG*KNPDVRSLETG Trigger: CCCTGTTTCCAGTGACCGCACATCAGGGTTCTTTCAGCCCTGTATGTCAGTTTCCATATTCCTAAGTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | TCTCACATGCCAATGATCACTCTGATCACAGATGCTTaGTTGACACAAGGTCTTTGTGGGCCACTGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SHMPMITLITDA*LTQGLCGPLNP Trigger: GGGATTCAGTGGCCCACAAAGACCTTGTGTCAATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR GCA 72 bp | AAGTCCTTAGGAGAGGATTGCGTCTGGGCTGCACGTTaGTCTGAGGAACTTTTAAGAGCATTTAGCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSLGEDCVWAAR*SEELLRAFSKE Trigger: TTCCTTGCTAAATGCTCTTAAAAGTTCCTCAGAGCAACGTGCAGCCCAGACGCAATCCTCTCCTAAGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GGTTATTTAGACGCTCTTGGTTGGCTGGTTCCCAGCTaGGTACTCGTGGAGTTATTTAAGACAGGAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GYLDALGWLVPS*VLVELFKTGKP Trigger: TGGTTTTCCTGTCTTAAATAACTCCACGAGTACCCAGCTGGGAACCAGCCAACCAAGAGCGTCTAAATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | CTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGATaGAGCTATAGCAAGATCCTCGTGTCAATGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LTDSIERSKDCG*SYSKILVSMKT Trigger: AGTCTTCATTGACACGAGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTGCCGGCGTCTCACATGCCAATGATCACTCTGATCACAGATGCTTGATTGCATGTGCCTTCTCATaGACTATAGAAGTAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: ACAGVSHANDHSDHRCLIACAFS*TIEVRI Trigger: AATTCTTACTTCTATAGTCAATGAGAAGGCACATGC...AATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACATGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | ACACACACACACACACACACACACACACATACAGGGTaGTTATTGCAATGTTTACATGATGTCACAATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTG*LLQCLHDVTMS Trigger: GGACATTGTGACATCATGTAAACATTGCAATAACCACCCTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CCA 72 bp | GAAAATTCCATAACTCCATCTCACTGTGATAGAGAATaGCCACTGGGAACAAATGGGGAAGATAGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ENSITPSHCDRE*PLGTNGEDRRD Trigger: GTCTCTTCTATCTTCCCCATTTGTTCCCAGTGGCCATTCTCTATCACAGTGAGATGGAGTTATGGAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | ACTGTGGATGGAGCTATAGCAAGATCCTCGTGTCAATaGAGACTGAAACACTTAGGAATATGGAAACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: TVDGAIARSSCQ*RLKHLGIWKLT Trigger: TGTCAGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATAGCTCCATCCACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | TCCCCAAATCTAAACGACAAGGTGATATGTTTTCTCTaGGAGGAGAAATGGAACAACAAATTGAAGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: SPNLNDKVICFL*EEKWNNKLKTF Trigger: GAATGTCTTCAATTTGTTGTTCCATTTCTCCTCTCAGAGAAAACATATCACCTTGTCGTTTAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR TCA 72 bp | TCTACTTCTGATGTAGATAAATCGTTAAAAACACAGTaGACGACGTCTGCTTCAAAGTATTTCATTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: STSDVDKSLKTQ*TTSASKYFIKV Trigger: CACCTTAATGAAATACTTTGAAGCAGACGTCGTTCACTGTGTTTTTAACGATTTATCTACATCAGAAGTAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| 3UTR CAA 72 bp | TTGGTGGAGCAAGAGGCCGACCAAAACACCCCAGCATaGGGACCTCTGCCCACTGGCCATGCCTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVEQEADQNTPA*GPLPTGHACWP Trigger: TGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGTGTTTTGGTCGGCCTCTTGCTCCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGATCCCTCACGCAGTAGCTATGATTCCTTCTGAAGGATACGGGGTGTCTGCCTCGCTGCTCTaGACCTCACGGTTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPLIPHAVAMIPSEGYGVSASLL*TSRLGL Trigger: GAGCCCCAACCGTGAGGTCCAGAGCAGCGAGGCAGA...CACCCCGTATCCTTCAGAAGGAATCATAGCTACTGCGTGAGGGATCAGTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGATGCATCGCAGGTCCACGCACTTGCCCTTaGGCTTCTCCTTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPTQDWPQLPGMLRCIAGPRTCP*ASPSSS Trigger: AGAAGAGGAAGGAGAAGCTCAAGGGCAAGTGCGTGG...ACCTGCGATGCATCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR GCA 90 bp | GAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTGGTCAAACGAGGGAGCTCTTaGCAACACCGCCTGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: EYCIGSHSATASSTCGLVKRGSS*QHRLPQ Trigger: TTGGGGCAGGCGGTGTTGGCAAGAGCTCCCTCGTTT...GACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CCA 90 bp | TGTTTGAACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAAATGGCCGGAAACTGGTaGCTCCCGGTGGTGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLNTVCFGGFGGARGRPKMAGNW*LPVVSV Trigger: CACCGACACCACCGGGAGCCACCAGTTTCCGGCCAT...TTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | GACAGCATAGAGAGGAGCAAAGACTGTGGATGGAGCTATAGCAAGATCCTCGTGTCCCGGTGGTGTCGGTaGTCTGCAGCGTGCATATGC | + |
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Preference number: 4 (lower is better) Translates to: DSIERSKDCGWSYSKILVSRWCR*SAACIC Trigger: GCATATGCACGCTGCAGATCACCGACACCACCGGGA...CACGAGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | TGTTTGAACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAAGCTCATAGATGGGCTTaGGTTCCTCCAGGGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLNTVCFGGFGGARGRPKAHRWA*VPPGTA Trigger: GGCAGTCCCTGGAGGAACTCAAGCCCATCTATGAGC...TTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR GCA 90 bp | GAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTGGTCGTGGTGTCGGTGATCTaGAGCGTGCATATGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EYCIGSHSATASSTCGLVVVSVI*SVHMLL Trigger: CAAGAGCATATGCACGCTGCAGATCACCGACACCAC...GACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR GCA 90 bp | TTCAAATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGAGCTGCTTGCTCTTCTTaGCGTCGATCTGGAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FKWLKPTQDWPQLPGMLRAACSS*RRSGGS Trigger: TGAGCCTCCAGATCGACGGCAAGAAGAGCAAGCAGC...TCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGAGGATGTAGCTCTCCCTaGAGGTCCCTTTCACAAACC | + |
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Preference number: 4 (lower is better) Translates to: HLPPSKLTDSIERSKDCGGCSSP*RSLSQT Trigger: GGTTTGTGAAAGGGACCTTCAGGGAGAGCTACATCC...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | GCATGTGCCGGCGTCTCACATGCCAATGATCACTCTGATCACAGATGCTTGATTTGGAGTAGACCAGGATaGAGGCGTGGCCTTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ACAGVSHANDHSDHRCLIWSRPG*RRGLWR Trigger: TCTCCAAAGGCCACGCCTTCATCCTGGTCTACTCCA...AATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | TTCAAATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGATGTTACCCACCAGCATaGTGGGGATGCTCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FKWLKPTQDWPQLPGMLRCYPPA*WGCSPH Trigger: ATGTGGAGAGCATCCCCATCATGCTGGTGGGTAACA...TCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | GAGTACTGTATAGGCTCACACAGTGCTACAGCCTCCTCTACCTGCGGACTGGTCAGGTTGAGGAGTTCCTaGAAGAGTTCCTTCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: EYCIGSHSATASSTCGLVRLRSS*KSSFTL Trigger: CAACGTGAAGGAACTCTTTCAGGAACTCCTCAACCT...GACCAGTCCGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCCTATACAGTACTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR GCA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGATCCTTCCTCTTCTGCTaGTTGCTCTTCTTGCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: HLPPSKLTDSIERSKDCGSFLFC*LLFLPS Trigger: CGACGGCAAGAAGAGCAAGCAGCAGAAGAGGAAGGA...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CCA 90 bp | GACAGCATAGAGAGGAGCAAAGACTGTGGATGGAGCTATAGCAAGATCCTCGTGTCTGGACCTCACGGTTaGGGCTCTCATCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: DSIERSKDCGWSYSKILVSGPHG*GSHHTC Trigger: ACAAGTGTGATGAGAGCCCCAACCGTGAGGTCCAGA...CACGAGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 72 bp | CATATGCCCCTTTGGCTTTGGGTGTTTCCAAACAGCTaGAGTAGGAGCGACACGTTACAAACTTGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: HMPLWLWVFPNS*SRSDTLQTWGR Trigger: CCTACCCCAAGTTTGTAACGTGTCGCTCCTACTCAAGCTGTTTGGAAACACCCAAAGCCAAAGGGGCATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 72 bp | CACTCTGATCACAGATGCTTGATTGACACAAGGTCTTaGTGGGCCACTGAATCCCAGGAGGTGTCCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: HSDHRCLIDTRS*WATESQEVSFL Trigger: TAGGAAGGACACCTCCTGGGATTCAGTGGCCCACAAAGACCTTGTGTCAATCAAGCATCTGTGATCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR GCA 90 bp | TATAGCAAGATCCTCGTGTCAATGAAGACTGAAACACTTAGGAATATGGAAACTCTTGCCAACACCGCCTaGCCCAAACACCGCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: YSKILVSMKTETLRNMETLANTA*PKHRHP Trigger: CGGGTGGCGGTGTTTGGGGCAGGCGGTGTTGGCAAG...AGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACGAGGATCTTGCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTTAAAAATCAGAGGGCTGCAAGAAGTGGCAACCCTCGAAGGTCAGAAGTCTCCACATCCCCCTTaGTCTCGCAGATCTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FYLKIRGLQEVATLEGQKSPHPP*SRRSAH Trigger: ATGAGCAGATCTGCGAGATCAAGGGGGATGTGGAGA...CTTCTGACCTTCGAGGGTTGCCACTTCTTGCAGCCCTCTGATTTTTAAATAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 72 bp | AAATGGATGTGCTTCTGGTTATTTAGACGCTCTTGGTaGGCTGGTTCCCAGCTGGGTACTCGTGGAGTTATT | + |
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Preference number: 4 (lower is better) Translates to: KWMCFWLFRRSW*AGSQLGTRGVI Trigger: AATAACTCCACGAGTACCCAGCTGGGAACCAGCCAACCAAGAGCGTCTAAATAACCAGAAGCACATCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 72 bp | AATGTAGGATATTACCAAGAGTCTCAGCTTCATGACTaGGGCTGGGACCAAAGCAAAGCTGAAAGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: NVGYYQESQLHD*GWDQSKAESHW Trigger: CCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAAGTCATGAAGCTGAGACTCTTGGTAATATCCTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| 3UTR CAA 72 bp | GTCTCACATGCCAATGATCACTCTGATCACAGATGCTaGATTGACACAAGGTCTTTGTGGGCCACTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: VSHANDHSDHRC*IDTRSLWATES Trigger: GGATTCAGTGGCCCACAAAGACCTTGTGTCAATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS CCA 90 bp | AAGGCGCACTTCCATGTGCGGGCTAGGGCCTCTGCCTCGCTGCTCTaGACCTCACGGTTGGGGCTCTCATCACACTTGTTACCCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: KAHFHVRARASASLL*TSRLGLSSHLLPTS Trigger: GCTGGTGGGTAACAAGTGTGATGAGAGCCCCAACCGTGAGGTCCAGAGCAGCGAGGCAGAGGCCCTAGCCCGCACATGGAAGTGCGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | AACACAGTGTGCTTCGGAGGCTTTGGTGGAGCAAGAGGCCGACCAAAACACCCCCTCTGGACCTCACGGTaGGGGCTCTCATCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: NTVCFGGFGGARGRPKHPLWTSR*GLSSHL Trigger: CAAGTGTGATGAGAGCCCCAACCGTGAGGTCCAGAG...GGGGTGTTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS TCA 90 bp | ATCTGGAGGCTCACGGTCCTGCGCTTCTCCAGGTTGAGGAGTTCCTaGAAGAGTTCCTTCACGTTGTGGTTGAGCTTGGCGGACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: IWRLTVLRFSRLRSS*KSSFTLWLSLADVS Trigger: GGAGACGTCCGCCAAGCTCAACCACAACGTGAAGGAACTCTTTCAGGAACTCCTCAACCTGGAGAAGCGCAGGACCGTGAGCCTCCAGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | CACCTCCCACCCTCTAAACTCACAGACAGCATAGAGAGGAGCAAAGACTGTGGATCCTTCACGTTGTGGTaGAGCTTGGCGGACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HLPPSKLTDSIERSKDCGSFTLW*SLADVS Trigger: GGAGACGTCCGCCAAGCTCAACCACAACGTGAAGGA...TCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTAGAGGGTGGGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | TTCAAATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGATGCTGCTTGCTCTTCTaGCCGTCGATCTGGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FKWLKPTQDWPQLPGMLRCCLLF*PSIWRL Trigger: GAGCCTCCAGATCGACGGCAAGAAGAGCAAGCAGCA...TCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | ATTGGCAGAGCAGAGAGGGCCAGACTGAATTATAGAGGTCTGAAGGAAGCAAGTAAAACGAGGGAGCTCTaGCCAACACCGCCTGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: IGRAERARLNYRGLKEASKTREL*PTPPAP Trigger: TGGGGCAGGCGGTGTTGGCAAGAGCTCCCTCGTTTT...ACTTGCTTCCTTCAGACCTCTATAATTCAGTCTGGCCCTCTCTGCTCTGCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | TTCAAATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGACTCTCCACATCCCCCTaGATCTCGCAGATCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FKWLKPTQDWPQLPGMLRLSTSP*ISQICS Trigger: TGAGCAGATCTGCGAGATCAAGGGGGATGTGGAGAG...TCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | TTCAAATGGCTAAAGCCCACTCAGGACTGGCCTCAGCTTCCTGGGATGCTAAGAAAGAGTTCCTTCACGTaGTGGTTGAGCTTGGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: FKWLKPTQDWPQLPGMLRKSSFT*WLSLAD Trigger: GTCCGCCAAGCTCAACCACAACGTGAAGGAACTCTT...TCTTAGCATCCCAGGAAGCTGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | GACAGCATAGAGAGGAGCAAAGACTGTGGATGGAGCTATAGCAAGATCCTCGTGACCACGCACTTGCCCTaGAGCTTCTCCTTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DSIERSKDCGWSYSKILVTTHLP*SFSFLF Trigger: GAAGAGGAAGGAGAAGCTCAAGGGCAAGTGCGTGGT...CACGAGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS-3UTR CAA 90 bp | CTCCATCTCACTGTGATAGAGAATGGCCACTGGGAACAAATGGGGAAGATAGAATTCCTCTTCTGCTGCTaGCTCTTCTTGCCGTCGATC | + |
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Preference number: 5 (lower is better) Translates to: LHLTVIENGHWEQMGKIEFLFCC*LFLPSI Trigger: GATCGACGGCAAGAAGAGCAAGCAGCAGAAGAGGAA...TTCTATCTTCCCCATTTGTTCCCAGTGGCCATTCTCTATCACAGTGAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS GCA 72 bp | CGCACTTCCATGTGCGGGCTAGGGCCTCTGCCTCGCTaGTCTGGACCTCACGGTTGGGGCTCTCATCACACT | + |
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Preference number: 6 (lower is better) Translates to: RTSMCGLGPLPR*SGPHGWGSHHT Trigger: AGTGTGATGAGAGCCCCAACCGTGAGGTCCAGAGCAGCGAGGCAGAGGCCCTAGCCCGCACATGGAAGTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS GCA 72 bp | AGGTCCCTTTCACAAACCTCAAAACGAGGGAGCTCTTaGCAACACCGCCTGCCCCAAACACCGCCACCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RSLSQTSKRGSS*QHRLPQTPPPG Trigger: ACCGGGTGGCGGTGTTTGGGGCAGGCGGTGTTGGCAAGAGCTCCCTCGTTTTGAGGTTTGTGAAAGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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| CDS CAA 72 bp | AAGGTCCCTTTCACAAACCTCAAAACGAGGGAGCTCTaGCCAACACCGCCTGCCCCAAACACCGCCACCCGG | + |
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Preference number: 6 (lower is better) Translates to: KVPFTNLKTREL*PTPPAPNTATR Trigger: CCGGGTGGCGGTGTTTGGGGCAGGCGGTGTTGGCAAGAGCTCCCTCGTTTTGAGGTTTGTGAAAGGGACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057442.8 |
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