Pregenerated sensors for DIRAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043670Ensembl transcript IDs: ENSMUST00000055125.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTGGGCAGGTTGGCCAGCAGCCAGGGTGGGCTCCGGCCTCCCCTaGCACCCAGCCCGGTTCTCCCCAGGATGGGCAAGGCCAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: AWAGWPAARVGSGLP*HPARFSPGWARPAR Trigger: CCTGGCTGGCCTTGCCCATCCTGGGGAGAACCGGGCTGGGTGGCAGGGGAGGCCGGAGCCCACCCTGGCTGCTGGCCAACCTGCCCAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | TGGGTCACAGCAAGCGAGGCCTGGCGGGGTCCCCAGCACCAGAGATaGCTGGGCAGGTTGGCCAGCAGCCAGGGTGGGCTCCGGCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: WVTASEAWRGPQHQR*LGRLASSQGGLRPP Trigger: GGGAGGCCGGAGCCCACCCTGGCTGCTGGCCAACCTGCCCAGGCATCTCTGGTGCTGGGGACCCCGCCAGGCCTCGCTTGCTGTGACCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | CGGGGTGGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTGCCTGGTaGCTGAGGCCCAGCCCTCGGGCCCATCCACCCTGGTGTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: RGGQGIAAGPVFIAW*LRPSPRAHPPWCAD Trigger: GTCTGCACACCAGGGTGGATGGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | TGGTACTCGGGGTGGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTaGCTGGTGCCTGAGGCCCAGCCCTCGGGCCCATCCACCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: WYSGWPGHCCRPCVY*LVPEAQPSGPSTLV Trigger: CACCAGGGTGGATGGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGTACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | ACTCGGGGTGGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTGCCTaGTGCCTGAGGCCCAGCCCTCGGGCCCATCCACCCTGGTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: TRGGQGIAAGPVFIA*CLRPSPRAHPPWCA Trigger: TGCACACCAGGGTGGATGGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 90 bp | GTGGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTGCCTGGTGCCTaGGGCCCAGCCCTCGGGCCCATCCACCCTGGTGTGCAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: VARALLQALCLLPGA*GPALGPIHPGVQTG Trigger: TCCTGTCTGCACACCAGGGTGGATGGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | GCAGCTGTGGGGGCCCTGGGCTGGCTAGAGGTCAGGGCTCAGCTATaGTCAGACTCAGGCTTCAGGCTGTGGCTCTCCCTGTGCCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: AAVGALGWLEVRAQL*SDSGFRLWLSLCLA Trigger: TGCCAGGCACAGGGAGAGCCACAGCCTGAAGCCTGAGTCTGAGCATAGCTGAGCCCTGACCTCTAGCCAGCCCAGGGCCCCCACAGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | GGGCGTCTGCTATTCCAGAGGTGGTACTCGGGGTGGCCAGGGCATTaGTGCAGGCCCTGTGTTTATTGCCTGGTGCCTGAGGCCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GRLLFQRWYSGWPGH*CRPCVYCLVPEAQP Trigger: GGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGTACCACCTCTGGAATAGCAGACGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 90 bp | AGAAGCCTGGGGTGGCCCAGAGATTGTGCTATCAGGGTGTGTCCCTaGGAAAGGGCTGTGACCCCCTGTCCAGCCAGGAGCCACTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: RSLGWPRDCAIRVCP*ERAVTPCPARSHSR Trigger: CCGGGAGTGGCTCCTGGCTGGACAGGGGGTCACAGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCTGGGCCACCCCAGGCTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | CGTCTGCTATTCCAGAGGTGGTACTCGGGGTGGCCAGGGCATTGCTaGAGGCCCTGTGTTTATTGCCTGGTGCCTGAGGCCCAGCCCTCG | + |
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Preference number: 1 (lower is better) Translates to: RLLFQRWYSGWPGHC*RPCVYCLVPEAQPS Trigger: CGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGTACCACCTCTGGAATAGCAGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | TCAGGGTTCCAGTGTGCCTCCCCTGAAGGGACAGTCCTGGGCTTGTaGTGTGGGCGTCTGCTATTCCAGAGGTGGTACTCGGGGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SGFQCASPEGTVLGL*CGRLLFQRWYSGWP Trigger: TGGCCACCCCGAGTACCACCTCTGGAATAGCAGACGCCCACAGCACAAGCCCAGGACTGTCCCTTCAGGGGAGGCACACTGGAACCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | CAGCCCGGTTCTCCCCAGGATGGGCAAGGCCAGCCAGGAGAAGCCTaGGGTGGCCCAGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: QPGSPQDGQGQPGEA*GGPEIVLSGCVPEK Trigger: TTTCTCAGGGACACACCCTGATAGCACAATCTCTGGGCCACCCCAGGCTTCTCCTGGCTGGCCTTGCCCATCCTGGGGAGAACCGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | GGCTTGTGCTGTGGGCGTCTGCTATTCCAGAGGTGGTACTCGGGGTaGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTGCCTGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: GLCCGRLLFQRWYSG*PGHCCRPCVYCLVP Trigger: AGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGTACCACCTCTGGAATAGCAGACGCCCACAGCACAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | CTAGAGGTCAGGGCTCAGCTATGCTCAGACTCAGGCTTCAGGCTGTaGCTCTCCCTGTGCCTGGCACACAGAAGGGAACACAGTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LEVRAQLCSDSGFRL*LSLCLAHRREHSGV Trigger: GACCCCACTGTGTTCCCTTCTGTGTGCCAGGCACAGGGAGAGCCACAGCCTGAAGCCTGAGTCTGAGCATAGCTGAGCCCTGACCTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | GGCCTCTGTACTGCAGCTTTGTCACTTCTGAGCCAGGAGCCAGCTTaGCACAGCCTGGAACAGACCTGGTGCTCATCAGACAGGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GLCTAALSLLSQEPA*HSLEQTWCSSDRPV Trigger: CACAGGCCTGTCTGATGAGCACCAGGTCTGTTCCAGGCTGTGGCAAGCTGGCTCCTGGCTCAGAAGTGACAAAGCTGCAGTACAGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 90 bp | GGGGTGGGGGAGCAAAGAGATATAGAGGGAGAGGTCTGCAAAGGATaGAGCTATGGAGGTGTGAAGAGGCAGGGATGGAGCCCAACCTTA | + |
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Preference number: 1 (lower is better) Translates to: GVGEQRDIEGEVCKG*SYGGVKRQGWSPTL Trigger: TAAGGTTGGGCTCCATCCCTGCCTCTTCACACCTCCATAGCTTCATCCTTTGCAGACCTCTCCCTCTATATCTCTTTGCTCCCCCACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | ACAGGGACAGAGATGGAGAGGCAAGGTAACCTCTCTGGGCCTGACTaGGATGAGCAGTTCCTTAGCCAGGTCCCTGTTTTCAGATCCACA | + |
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Preference number: 1 (lower is better) Translates to: TGTEMERQGNLSGPD*DEQFLSQVPVFRST Trigger: TGTGGATCTGAAAACAGGGACCTGGCTAAGGAACTGCTCATCCCAGTCAGGCCCAGAGAGGTTACCTTGCCTCTCCATCTCTGTCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | GGAGCAAAGAGATATAGAGGGAGAGGTCTGCAAAGGATGAAGCTATaGAGGTGTGAAGAGGCAGGGATGGAGCCCAACCTTACTGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: GAKRYRGRGLQRMKL*RCEEAGMEPNLTVG Trigger: GCCTACAGTAAGGTTGGGCTCCATCCCTGCCTCTTCACACCTCCATAGCTTCATCCTTTGCAGACCTCTCCCTCTATATCTCTTTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 90 bp | CACACACACGGCCACTTACACTGTGGTCTCACTAAGAACACAAAGTaGTGCAAGAACACCCCATCCCAAGACAGACACACACCCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: HTHGHLHCGLTKNTK*CKNTPSQDRHTPIH Trigger: GTGGATGGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCACCACTTTGTGTTCTTAGTGAGACCACAGTGTAAGTGGCCGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 90 bp | ACACACGGCCACTTACACTGTGGTCTCACTAAGAACACAAAGTGGTaGAAGAACACCCCATCCCAAGACAGACACACACCCATCCACACA | + |
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Preference number: 1 (lower is better) Translates to: THGHLHCGLTKNTKW*KNTPSQDRHTPIHT Trigger: TGTGTGGATGGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCACCACTTTGTGTTCTTAGTGAGACCACAGTGTAAGTGGCCGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGCAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGTTATTGCCTGGTGCCTaGGGCCCAGCCCTCGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GGQCPGSHSTLQVQGSSVLLPGA*GPALGP Trigger: GGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAA...CACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTGCCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGAGGCCTGGCGGGGTCCCCAGCACCAGAGATGCCTGGGCAGGTTGGCCATGTGTCACCCACCCCTaGAAACACAGAGCCATACAG | + |
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Preference number: 2 (lower is better) Translates to: QARPGGVPSTRDAWAGWPCVTHP*KHRAIQ Trigger: CTGTATGGCTCTGTGTTTTCAGGGGTGGGTGACACA...TGGCCAACCTGCCCAGGCATCTCTGGTGCTGGGGACCCCGCCAGGCCTCGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGAGGCCTGGCGGGGTCCCCAGCACCAGAGATGCCTGGGCAGGTTGGCCAATTAGTGAAGGAAGATaGGGTCAATGGGCACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QARPGGVPSTRDAWAGWPISEGR*GQWALP Trigger: GGGGAGTGCCCATTGACCTCATCTTCCTTCACTAAT...TGGCCAACCTGCCCAGGCATCTCTGGTGCTGGGGACCCCGCCAGGCCTCGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCCAGGGACAGTGGGCATaGCTGGGCACACAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPQGQWA*LGTQGQ Trigger: CTGTCCCTGTGTGCCCAGCCATGCCCACTGTCCCTG...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCAGGACAGGGGTGTTCTaGACCCAGGGAAGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPRTGVF*TQGRPQ Trigger: CTGTGGCCTTCCCTGGGTCCAGAACACCCCTGTCCT...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGGGCTCTCCCTGTGCCTaGCACACAGAAGGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: YERTVHRPHMGWGSHMRGGSPCA*HTEGNT Trigger: TGTGTTCCCTTCTGTGTGCCAGGCACAGGGAGAGCC...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTATGCTCAGACTCAGGCTTCAGGCTGTGGCTCTCCCTGTGCCTGGCACACAAGCCAGGAGCCAGCTTaGCACAGCCTGGAACAGACC | + |
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Preference number: 2 (lower is better) Translates to: SYAQTQASGCGSPCAWHTSQEPA*HSLEQT Trigger: GGTCTGTTCCAGGCTGTGGCAAGCTGGCTCCTGGCT...TGTGTGCCAGGCACAGGGAGAGCCACAGCCTGAAGCCTGAGTCTGAGCATAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGTGGGCAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGGACAGTGGGCATGGCTaGGCACACAGGGACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRWAVSRQPLHTPSSGFQDSGHG*AHRDRD Trigger: ATCTCTGTCCCTGTGTGCCCAGCCATGCCCACTGTC...CTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTGCCCACCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTCTACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATCGGGCCCATCCACCCTaGTGTGCAGACAGGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QGLRENGTQTPHGMGLPHRAHPP*CADRRG Trigger: TCCTCTCCTGTCTGCACACCAGGGTGGATGGGCCCG...ATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTAGACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCCCTGTGTTTATTGCCTaGTGCCTGAGGCCCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPPVFIA*CLRPSP Trigger: AGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGG...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGACACAGGCCCAGGAGCCACTCAAGTCTCCTGGACAGTCTCGCAGATACCTGGGCTTGTGCTGTaGGCGTCTGCTATTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GWDTGPGATQVSWTVSQIPGLVL*ASAIPE Trigger: CTCTGGAATAGCAGACGCCCACAGCACAAGCCCAGG...TATCTGCGAGACTGTCCAGGAGACTTGAGTGGCTCCTGGGCCTGTGTCCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGAGGAGAAGCCTGGGGTaGCCCAGAGATTGTGCTATC | + |
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Preference number: 2 (lower is better) Translates to: YERTVHRPHMGWGSHMRGRRSLG*PRDCAI Trigger: GATAGCACAATCTCTGGGCCACCCCAGGCTTCTCCT...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTCTACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATCGGTTCTCCCCAGGATaGGCAAGGCCAGCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QGLRENGTQTPHGMGLPHRFSPG*ARPARR Trigger: TCTCCTGGCTGGCCTTGCCCATCCTGGGGAGAACCG...ATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTAGACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR TCA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGGAGGTCTGCAAAGGATaGAGCTATGGAGGTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: YERTVHRPHMGWGSHMRGEVCKG*SYGGVK Trigger: CTTCACACCTCCATAGCTTCATCCTTTGCAGACCTC...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR GCA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGCTGAGGCCTCTGTACTaGAGCTTTGTCACTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: YERTVHRPHMGWGSHMRGLRPLY*SFVTSE Trigger: CTCAGAAGTGACAAAGCTGCAGTACAGAGGCCTCAG...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCAAGAACACCCCATCCCAAGACAGACACACACCCATCCACACACACAGGCAAGGCCCTGTGTTTATTaGCTGGTGCCTGAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VQEHPIPRQTHTHPHTQARPCVY*LVPEAQ Trigger: CTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCT...TGCCTGTGTGTGTGGATGGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR GCA 90 bp | TCCACGTGTTTATTGCAGGAAGACAAGGTCTACGAGAGAACGGTACACAGACCCCCCCAGCACCAGAGATaGCTGGGCAGGTTGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: STCLLQEDKVYERTVHRPPQHQR*LGRLAS Trigger: GCTGGCCAACCTGCCCAGGCATCTCTGGTGCTGGGG...GGGTCTGTGTACCGTTCTCTCGTAGACCTTGTCTTCCTGCAATAAACACGTGGA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGACACAGGCCCAGGAGCCACTCAAGTCTCCTGGACAGTCTCGCAGATACAAACCTCCAGTGTGTaGTTGTGGGGTGCAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: GWDTGPGATQVSWTVSQIQTSSV*LWGADR Trigger: TCTATCTGCACCCCACAACCACACACTGGAGGTTTG...TATCTGCGAGACTGTCCAGGAGACTTGAGTGGCTCCTGGGCCTGTGTCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCACACAGAAGGGAACACAGTGGGGTCCGGCCTACTTGGTCATCTGGCTTCAAACCTTACTGTAGGCTaGTGGGGACAGGAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: WHTEGNTVGSGLLGHLASNLTVG*WGQEEG Trigger: TCCCTCTTCCTGTCCCCACCAGCCTACAGTAAGGTT...TGAAGCCAGATGACCAAGTAGGCCGGACCCCACTGTGTTCCCTTCTGTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTCATCAGACAGGCCTGTGTCACCCACCCCTGAAAACACAGAGCCATACAATCTCAGCAGAAGGCTaGTGTCCAGGTGGGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GAHQTGLCHPPLKTQSHTISAEG*CPGGQC Trigger: ACACTGCCCACCTGGACACCAGCCTTCTGCTGAGAT...TGTATGGCTCTGTGTTTTCAGGGGTGGGTGACACAGGCCTGTCTGATGAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR GCA 90 bp | TCCACGTGTTTATTGCAGGAAGACAAGGTCTACGAGAGAACGGTACACAGACCCGTGTTTATTGCCTGGTaGCTGAGGCCCAGCCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: STCLLQEDKVYERTVHRPVFIAW*LRPSPR Trigger: CCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACAC...GGGTCTGTGTACCGTTCTCTCGTAGACCTTGTCTTCCTGCAATAAACACGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCCAGGTCCCTGTTTTCAGATCCACAGGGATCAAACCTCCAGTGTGTGGTCAAAGGATGAAGCTATaGAGGTGTGAAGAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSQVPVFRSTGIKPPVCGQRMKL*RCEEAG Trigger: CCCTGCCTCTTCACACCTCCATAGCTTCATCCTTTG...ACCACACACTGGAGGTTTGATCCCTGTGGATCTGAAAACAGGGACCTGGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTCATCAGACAGGCCTGTGTCACCCACCCCTGAAAACACAGAGCCATACAACTAAGAACACAAAGTaGTGCAAGAACACCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GAHQTGLCHPPLKTQSHTTKNTK*CKNTPS Trigger: GGATGGGGTGTTCTTGCACCACTTTGTGTTCTTAGT...TGTATGGCTCTGTGTTTTCAGGGGTGGGTGACACAGGCCTGTCTGATGAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | GGGTGGCCAGGGCATTGCTGCAGGCCCTGTGTTTATTaGCTGGTGCCTGAGGCCCAGCCCTCGGGCCCATCC | + |
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Preference number: 3 (lower is better) Translates to: GWPGHCCRPCVY*LVPEAQPSGPS Trigger: GGATGGGCCCGAGGGCTGGGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | ACCCTGGTGTGCAGACAGGAGAGGACAGGGGTGTTCTaGACCCAGGGAAGGCCACAGGTCAGAGGTCACGGG | + |
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Preference number: 3 (lower is better) Translates to: TLVCRQERTGVF*TQGRPQVRGHG Trigger: CCCGTGACCTCTGACCTGTGGCCTTCCCTGGGTCCAGAACACCCCTGTCCTCTCCTGTCTGCACACCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CAA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGGGGGTGGCCAGGGCATaGCTGCAGGCCCTGTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: YERTVHRPHMGWGSHMRGGVARA*LQALCL Trigger: TAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCC...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 63% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CAA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGGGGACAGTCCTGGGCTaGTGCTGTGGGCGTCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YERTVHRPHMGWGSHMRGGTVLG*CCGRLL Trigger: TAGCAGACGCCCACAGCACAAGCCCAGGACTGTCCC...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 63% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR-3UTR CAA 90 bp | TACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGCGGGGGGGGGTGGCCCAGAGATaGTGCTATCAGGGTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YERTVHRPHMGWGSHMRGGVAQR*CYQGVS Trigger: GGACACACCCTGATAGCACAATCTCTGGGCCACCCC...CCCCCGCATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTA 62% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | TTCCAGAGGTGGTACTCGGGGTGGCCAGGGCATTGCTaGAGGCCCTGTGTTTATTGCCTGGTGCCTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FQRWYSGWPGHC*RPCVYCLVPEA Trigger: GGCCTCAGGCACCAGGCAATAAACACAGGGCCTGCAGCAATGCCCTGGCCACCCCGAGTACCACCTCTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | GGGTGGGACACAGGCCCAGGAGCCACTCAAGTCTCCTaGACAGTCTCGCAGATACCACAGGGGCTCCGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GWDTGPGATQVS*TVSQIPQGLRN Trigger: GTTACGGAGCCCCTGTGGTATCTGCGAGACTGTCCAGGAGACTTGAGTGGCTCCTGGGCCTGTGTCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | AGCCAGGAGCCAGCTTGCCACAGCCTGGAACAGACCTaGTGCTCATCAGACAGGCCTGTGTCACCCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: SQEPACHSLEQT*CSSDRPVSPTP Trigger: AGGGGTGGGTGACACAGGCCTGTCTGATGAGCACCAGGTCTGTTCCAGGCTGTGGCAAGCTGGCTCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | TCTCCCCAGGATGGGCAAGGCCAGCCAGGAGAAGCCTaGGGTGGCCCAGAGATTGTGCTATCAGGGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPQDGQGQPGEA*GGPEIVLSGCV Trigger: GACACACCCTGATAGCACAATCTCTGGGCCACCCCAGGCTTCTCCTGGCTGGCCTTGCCCATCCTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 72 bp | CCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCCTaGAGGGACAGTCCTGGGCTTGTGCTGTGGGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: PHSKFRVPVCLP*RDSPGLVLWAS Trigger: AGACGCCCACAGCACAAGCCCAGGACTGTCCCTTCAGGGGAGGCACACTGGAACCCTGAACTTGGAGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | CAGTGTGCCTCCCCTGAAGGGACAGTCCTGGGCTTGTaGTGTGGGCGTCTGCTATTCCAGAGGTGGTACTCG | + |
|
Preference number: 3 (lower is better) Translates to: QCASPEGTVLGL*CGRLLFQRWYS Trigger: CGAGTACCACCTCTGGAATAGCAGACGCCCACAGCACAAGCCCAGGACTGTCCCTTCAGGGGAGGCACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | CAGGAGCCAGCTTGCCACAGCCTGGAACAGACCTGGTaGTCATCAGACAGGCCTGTGTCACCCACCCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QEPACHSLEQTW*SSDRPVSPTPE Trigger: TTCAGGGGTGGGTGACACAGGCCTGTCTGATGAGCACCAGGTCTGTTCCAGGCTGTGGCAAGCTGGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 72 bp | CACACTGAGGCCTCTGTACTGCAGCTTTGTCACTTCTaGGCCAGGAGCCAGCTTGCCACAGCCTGGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HTEASVLQLCHF*ARSQLATAWNR Trigger: TCTGTTCCAGGCTGTGGCAAGCTGGCTCCTGGCTCAGAAGTGACAAAGCTGCAGTACAGAGGCCTCAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | ACTGCAGCTTTGTCACTTCTGAGCCAGGAGCCAGCTTaGCACAGCCTGGAACAGACCTGGTGCTCATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TAALSLLSQEPA*HSLEQTWCSSD Trigger: GTCTGATGAGCACCAGGTCTGTTCCAGGCTGTGGCAAGCTGGCTCCTGGCTCAGAAGTGACAAAGCTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 72 bp | AGGGAGAGGTCTGCAAAGGATGAAGCTATGGAGGTGTaGAGAGGCAGGGATGGAGCCCAACCTTACTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RERSAKDEAMEV*RGRDGAQPYCR Trigger: CCTACAGTAAGGTTGGGCTCCATCCCTGCCTCTTCACACCTCCATAGCTTCATCCTTTGCAGACCTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR TCA 72 bp | CTGGTCTGTAGCCACTGTGAGGTGATGACCTCACACTaGGGCCTCTGTACTGCAGCTTTGTCACTTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVCSHCEVMTSH*GLCTAALSLLS Trigger: GCTCAGAAGTGACAAAGCTGCAGTACAGAGGCCTCAGTGTGAGGTCATCACCTCACAGTGGCTACAGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | AGATATAGAGGGAGAGGTCTGCAAAGGATGAAGCTATaGAGGTGTGAAGAGGCAGGGATGGAGCCCAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RYRGRGLQRMKL*RCEEAGMEPNL Trigger: AAGGTTGGGCTCCATCCCTGCCTCTTCACACCTCCATAGCTTCATCCTTTGCAGACCTCTCCCTCTATATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR GCA 72 bp | CACTTACACTGTGGTCTCACTAAGAACACAAAGTGGTaGAAGAACACCCCATCCCAAGACAGACACACACCC | + |
|
Preference number: 3 (lower is better) Translates to: HLHCGLTKNTKW*KNTPSQDRHTP Trigger: GGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCACCACTTTGTGTTCTTAGTGAGACCACAGTGTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CCA 72 bp | GGCCACTTACACTGTGGTCTCACTAAGAACACAAAGTaGTGCAAGAACACCCCATCCCAAGACAGACACACA | + |
|
Preference number: 3 (lower is better) Translates to: GHLHCGLTKNTK*CKNTPSQDRHT Trigger: TGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCACCACTTTGTGTTCTTAGTGAGACCACAGTGTAAGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | CAAGCGAGGCCTGGCGGGGTCCCCAGCACCAGAGATGCCTGGGCAGGTTGGCCAGCACCAGCGAGCTCTTaGCCACGCCGCCTGCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QARPGGVPSTRDAWAGWPAPASS*PRRLRR Trigger: TCGGCGCAGGCGGCGTGGGCAAGAGCTCGCTGGTGC...TGGCCAACCTGCCCAGGCATCTCTGGTGCTGGGGACCCCGCCAGGCCTCGCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCTGCGCCTCGCGCGTGTaGACCTCCCGCTGCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPCASRV*TSRCVS Trigger: TGAGACGCAGCGGGAGGTGCACACGCGCGAGGCGCA...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | GGGCACTCCCCAGAGGTCACAGTGATAGAATGTGAGGGACAGGGACAGTGGGCAGCACTTCCACTCCTGTaGCACGGCCTGCGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHSPEVTVIECEGQGQWAALPLL*HGLRLA Trigger: CGCGAGGCGCAGGCCGTGGCACAGGAGTGGAAGTGC...TGCCCACTGTCCCTGTCCCTCACATTCTATCACTGTGACCTCTGGGGAGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | CCCACACACACACACGGCCACTTACACTGTGGTCTCACTAAGAACACAAAGTGGTCCTGTGCCACGGCCTaGGCCTCGCGCGTGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PTHTHGHLHCGLTKNTKWSCATA*ASRVCT Trigger: GGTGCACACGCGCGAGGCGCAGGCCGTGGCACAGGA...CCACTTTGTGTTCTTAGTGAGACCACAGTGTAAGTGGCCGTGTGTGTGTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCCAGCCCTCTTCTGCTTaGTGGAGCGTTTGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPQPSSA*WSVCRP Trigger: TGGACGGCAAACGCTCCAGCAAGCAGAAGAGGGCTG...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR CCA 90 bp | GGGTGGGACACAGGCCCAGGAGCCACTCAAGTCTCCTGGACAGTCTCGCAGATACCAGCGACTGCTTGCTaGTCACCGAGAACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWDTGPGATQVSWTVSQIPATAC*SPRTPG Trigger: TCCTGGTGTTCTCGGTGACCAGCAAGCAGTCGCTGG...TATCTGCGAGACTGTCCAGGAGACTTGAGTGGCTCCTGGGCCTGTGTCCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR TCA 90 bp | ATGGAGAGGCAAGGTAACCTCTCTGGGCCTGACTGGGATGAGCAGTTCCTTAGCTGCCGGTGGTGTCCGTaGTCTGCAGTGTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: MERQGNLSGPDWDEQFLSCRWCP*SAVCTR Trigger: GCGTGTGCACACTGCAGATCACGGACACCACCGGCA...GCTAAGGAACTGCTCATCCCAGTCAGGCCCAGAGAGGTTACCTTGCCTCTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTCCAGGCAGCCACTCCACACTCCAAGTTCAGGGTTCCAGTGTGCCTCCCGTGGTGTCCGTGATCTaGAGTGTGCACACGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCPGSHSTLQVQGSSVPPVVSVI*SVHTLL Trigger: CAAGAGCGTGTGCACACTGCAGATCACGGACACCAC...GGGAGGCACACTGGAACCCTGAACTTGGAGTGTGGAGTGGCTGCCTGGACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR TCA 90 bp | AGCTATGCTCAGACTCAGGCTTCAGGCTGTGGCTCTCCCTGTGCCTGGCACACACCTCCACGCTGCCCTTaGTCTGCACGATCAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYAQTQASGCGSPCAWHTPPRCP*SARSTC Trigger: ACAAGTTGATCGTGCAGATCAAGGGCAGCGTGGAGG...TGTGTGCCAGGCACAGGGAGAGCCACAGCCTGAAGCCTGAGTCTGAGCATAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| 3UTR CAA 72 bp | CAGCAGCCACTAGTCCTATCACCGCACACAGGGACTTaGCTGATAGACTCTCAGCTGGGCACCCCACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QQPLVLSPHTGT*LIDSQLGTPPS Trigger: TGAGGGTGGGGTGCCCAGCTGAGAGTCTATCAGCAAAGTCCCTGTGTGCGGTGATAGGACTAGTGGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR GCA 90 bp | GTGCAAGAACACCCCATCCCAAGACAGACACACACCCATCCACACACACAGGCACATCCAGCGACTGCTTaGTGGTCACCGAGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VQEHPIPRQTHTHPHTQAHPATA*WSPRTP Trigger: TGGTGTTCTCGGTGACCAGCAAGCAGTCGCTGGATG...TGCCTGTGTGTGTGGATGGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTCTACGAGAGAACGGTACACAGACCCCACATGGGATGGGGCTCCCACATGTAGTTCATCTTCGCTaGGGTTTCCATGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLRENGTQTPHGMGLPHVVHLR*GFHEGA Trigger: TGCGCCTTCATGGAAACCTCAGCGAAGATGAACTAC...ATGTGGGAGCCCCATCCCATGTGGGGTCTGTGTACCGTTCTCTCGTAGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR CCA 90 bp | GGTGCTCATCAGACAGGCCTGTGTCACCCACCCCTGAAAACACAGAGCCATACACGATCAACTTGTAGATaGGGCTCAGCTCATCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GAHQTGLCHPPLKTQSHTRSTCR*GSAHPA Trigger: CGCTGGATGAGCTGAGCCCCATCTACAAGTTGATCG...TGTATGGCTCTGTGTTTTCAGGGGTGGGTGACACAGGCCTGTCTGATGAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR CCA 90 bp | TCCACGTGTTTATTGCAGGAAGACAAGGTCTACGAGAGAACGGTACACAGACCCCCCTCTTCTGCTTGCTaGAGCGTTTGCCGTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: STCLLQEDKVYERTVHRPPSSAC*SVCRPR Trigger: GCGTGGACGGCAAACGCTCCAGCAAGCAGAAGAGGG...GGGTCTGTGTACCGTTCTCTCGTAGACCTTGTCTTCCTGCAATAAACACGTGGA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR TCA 90 bp | TCCACGTGTTTATTGCAGGAAGACAAGGTCTACGAGAGAACGGTACACAGACCCTCGCTGAGGTTTCCATaGAGGCGCACTTCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STCLLQEDKVYERTVHRPSLRFP*RRTSTP Trigger: AGGAGTGGAAGTGCGCCTTCATGGAAACCTCAGCGA...GGGTCTGTGTACCGTTCTCTCGTAGACCTTGTCTTCCTGCAATAAACACGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR CAA 90 bp | GTCAGGGCTCAGCTATGCTCAGACTCAGGCTTCAGGCTGTGGCTCTCCCTGTGCTCATCCAGCGACTGCTaGCTGGTCACCGAGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: VRAQLCSDSGFRLWLSLCSSSDC*LVTENT Trigger: GGTGTTCTCGGTGACCAGCAAGCAGTCGCTGGATGA...GCACAGGGAGAGCCACAGCCTGAAGCCTGAGTCTGAGCATAGCTGAGCCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS-3UTR CAA 90 bp | GTGCAAGAACACCCCATCCCAAGACAGACACACACCCATCCACACACACAGGCATCCTCCACGCTGCCCTaGATCTGCACGATCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQEHPIPRQTHTHPHTQASSTLP*ICTINL Trigger: CAAGTTGATCGTGCAGATCAAGGGCAGCGTGGAGGA...TGCCTGTGTGTGTGGATGGGTGTGTGTCTGTCTTGGGATGGGGTGTTCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS CAA 90 bp | CACTTGCCCTTGATGCGGTCAGCCCTCTTCTGCTTGCTGGAGCGTTaGCCGTCCACGCTGAGGCTGACGCTCCGGCGCGTCTCGAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLPLMRSALFCLLER*PSTLRLTLRRVSSV Trigger: GACGCTCGAGACGCGCCGGAGCGTCAGCCTCAGCGTGGACGGCAAACGCTCCAGCAAGCAGAAGAGGGCTGACCGCATCAAGGGCAAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS CAA 72 bp | TTGATGCGGTCAGCCCTCTTCTGCTTGCTGGAGCGTTaGCCGTCCACGCTGAGGCTGACGCTCCGGCGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LMRSALFCLLER*PSTLRLTLRRV Trigger: GACGCGCCGGAGCGTCAGCCTCAGCGTGGACGGCAAACGCTCCAGCAAGCAGAAGAGGGCTGACCGCATCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS GCA 72 bp | AGCGCGCACTTGCCCTTGATGCGGTCAGCCCTCTTCTaGTTGCTGGAGCGTTTGCCGTCCACGCTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAHLPLMRSALF*LLERLPSTLRL Trigger: CAGCCTCAGCGTGGACGGCAAACGCTCCAGCAAGCAGAAGAGGGCTGACCGCATCAAGGGCAAGTGCGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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| CDS TCA 72 bp | CCTTCACGTTGTAGTTCATCTTCGCTGAGGTTTCCATaGAGGCGCACTTCCACTCCTGTGCCACGGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSRCSSSSLRFP*RRTSTPVPRPA Trigger: CGCAGGCCGTGGCACAGGAGTGGAAGTGCGCCTTCATGGAAACCTCAGCGAAGATGAACTACAACGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055125.5 |
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