Pregenerated sensors for DIPK2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037358Ensembl transcript IDs: ENSMUST00000044188.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTaGAACATGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: PNIWDFLTCPICVCF*NMFCWSQLYFWAPY Trigger: GTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CCA 90 bp | AAATATACAGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTaGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: KYTENGGSKILSVHT*SSCVYLLTMPWCSS Trigger: GCTAGAACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CAA 90 bp | CTTATAGTCTCTTCTCGGAGATGCAGGAGAGTAGGAATGGGGGCCTaGAGTTCCAATGGCTCAAAGCCCTGCCTTCACCTTGCCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: LIVSSRRCRRVGMGA*SSNGSKPCLHLALY Trigger: GTAGAGGGCAAGGTGAAGGCAGGGCTTTGAGCCATTGGAACTCAAGGCCCCCATTCCTACTCTCCTGCATCTCCGAGAAGAGACTATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGCCTTCACCTTGCCCTCTACCTACACTAGCCTCCCAACATATGGGACTCCTGTGTCTACCTCCTaGCTATGCCATGGTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SPAFTLPSTYTSLPTYGTPVSTS*LCHGVL Trigger: TAGAACACCATGGCATAGTCAGGAGGTAGACACAGG...AGTCCCATATGTTGGGAGGCTAGTGTAGGTAGAGGGCAAGGTGAAGGCAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR TCA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTGGTGTTCTAGCCAGTaGGGTCAAACATGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVWCSSQ*GQTCSV Trigger: GACACTGCATGTTTGACCTCACTGGCTAGAACACCA...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR GCA 90 bp | GAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTACGGACATGGAAGAGCTTaGAGATTGTCCCTTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ENGGSKILSVHTWSSCVYGHGRA*RLSLQP Trigger: TGGCTGAAGGGACAATCTGCAAGCTCTTCCATGTCC...GTAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCATTGAGTGTTCACACCTaGTCTTCCTGTGTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: DFLTCPICVCFWNMFCWSLSVHT*SSCVYL Trigger: GAGGTAGACACAGGAAGACCAGGTGTGAACACTCAA...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCTCCCAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGTCACAATTGTATTTCTaGGCTCCTTACACCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LASQHMGLSYLPYLRVFLSQLYF*APYTSV Trigger: AACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGA...CAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTGGGAGGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CAA 90 bp | CTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTaGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LSYLPYLRVFLEHVL*VTIVFLGSLHLCFL Trigger: AAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR GCA 72 bp | CTTGAGTTCCAATGGCTCAAAGCCCTGCCTTCACCTTaGCCTCTACCTACACTAGCCTCCCAACATATGGGA | + |
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Preference number: 3 (lower is better) Translates to: LEFQWLKALPSP*PLPTLASQHMG Trigger: TCCCATATGTTGGGAGGCTAGTGTAGGTAGAGGGCAAGGTGAAGGCAGGGCTTTGAGCCATTGGAACTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR CAA 90 bp | TTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTAGGACATGGAAGAGCTaGCAGATTGTCCCTTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LSVHTWSSCVYLLTMPWCRTWKS*QIVPSA Trigger: GGCTGAAGGGACAATCTGCAAGCTCTTCCATGTCCT...ACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR GCA 72 bp | CCTCCCAACATATGGGACTTTCTTACTTGCCCTATCTaGGTGTGTTTCTGGAACATGTTTTGTTGGTCACAA | + |
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Preference number: 3 (lower is better) Translates to: PPNIWDFLTCPI*VCFWNMFCWSQ Trigger: TTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CCA 72 bp | TGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTaGTCACAATTGTATTTCTGGGCTCCTTACACCTCT | + |
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Preference number: 3 (lower is better) Translates to: CPICVCFWNMFC*SQLYFWAPYTS Trigger: AGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CCA 72 bp | TGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTaGAACATGTTTTGTTGGTCACAATTGTATTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WDFLTCPICVCF*NMFCWSQLYFW Trigger: CCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTTGGAGGTTCAAAGATATaGAGTGTTCACACCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: MFCWSQLYFWAPYTSVFFGGSKI*SVHTWS Trigger: AGACCAGGTGTGAACACTCAATATCTTTGAACCTCC...AAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | AGCCCTGCCTTCACCTTGCCCTCTACCTACACTAGCCTCCCAACATATGGGACTAGCGCAGGAAGGGACTaGGCAGGCCCTGCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SPAFTLPSTYTSLPTYGTSAGRD*AGPAPG Trigger: ACCTGGTGCAGGGCCTGCCCAGTCCCTTCCTGCGCT...AGTCCCATATGTTGGGAGGCTAGTGTAGGTAGAGGGCAAGGTGAAGGCAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | GTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTTCTAGCCAGGTACCTGGGCATTaGCCAGCCCTCTGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHTWSSCVYLLTMPWCSSQVPGH*PALCSR Trigger: CCTGGAGCAGAGGGCTGGCCAATGCCCAGGTACCTG...GCTAGAACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | AGCCCTGCCTTCACCTTGCCCTCTACCTACACTAGCCTCCCAACATATGGGACTTACCTGCTGACCAGTTaGGAAATCTCCACAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SPAFTLPSTYTSLPTYGTYLLTS*EISTGR Trigger: GCGCCCTGTGGAGATTTCTCAACTGGTCAGCAGGTA...AGTCCCATATGTTGGGAGGCTAGTGTAGGTAGAGGGCAAGGTGAAGGCAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CAA 72 bp | TCTTCTCGGAGATGCAGGAGAGTAGGAATGGGGGCCTaGAGTTCCAATGGCTCAAAGCCCTGCCTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: SSRRCRRVGMGA*SSNGSKPCLHL Trigger: AAGGTGAAGGCAGGGCTTTGAGCCATTGGAACTCAAGGCCCCCATTCCTACTCTCCTGCATCTCCGAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | ATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTCCAGTCCTGGCAGCTaGTTGGCTGCCTTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ILSVHTWSSCVYLLTMPWSSPGS*LAAFLL Trigger: AAGCAGGAAGGCAGCCAAGCAGCTGCCAGGACTGGA...CCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAATAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | TTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTGAAGGATGCGCTCAATaGTGCAGGTCTTTGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSVHTWSSCVYLLTMPWCEGCAQ*CRSLVL Trigger: CAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTC...ACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCAAGGAGCCCAGGTACCTaGGCATTGGCCAGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: DFLTCPICVCFWNMFCWSRSPGT*ALASPL Trigger: CAGAGGGCTGGCCAATGCCCAGGTACCTGGGCTCCT...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCAGAACAGCTCAGGGTTaGGACCCACAGCAGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TENGGSKILSVHTWSSCVRTAQG*DPQQQP Trigger: CGGCTGCTGCTGTGGGTCTCAACCCTGAGCTGTTCT...GACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | TTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTGGATGCGCTCAATGCTaGAGGTCTTTGGTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: LSVHTWSSCVYLLTMPWCGCAQC*RSLVLI Trigger: TATCAGCACCAAAGACCTGCAGCATTGAGCGCATCC...ACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCCGGGCTAGCCAGTGTTaGTGGAAGGCGGTAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TENGGSKILSVHTWSSCVRASQC*WKAVAA Trigger: TGCAGCTACCGCCTTCCACCAACACTGGCTAGCCCG...GACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | ATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGAACCTCCCTGTTTTCTaGAGGATGCGCTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: ILSVHTWSSCVYLLTMPWNLPVF*RMRSML Trigger: CAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTT...CCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCAGTCCAAGAGTCTTTGTaGAGGGCAGCGCAGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: DFLTCPICVCFWNMFCWSVQESL*RAAQEG Trigger: CCCTTCCTGCGCTGCCCTTCACAAAGACTCTTGGAC...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCAGGGATTCCAGGACCCTaGGGAGTTGGTAGGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DFLTCPICVCFWNMFCWSGIPGP*GVGRQG Trigger: ACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCC...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTGCTCCAGGGAAGATCTaGAGGATGATGGGGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVAPGKI*RMMGCA Trigger: CGCACACCCCATCATCCTGCAGATCTTCCCTGGAGC...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAAGTCCTGGCAGCTGCTTaGCTGCCTTCCTGCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: FLTCPICVCFWNMFCWSQVLAAA*LPSCLS Trigger: CGACAAGCAGGAAGGCAGCCAAGCAGCTGCCAGGAC...TTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | AGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTAGTGAGGCGCTTGGCCTaGAGCCATTTCTGGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: RKWRFKDIECSHLVFLCLVRRLA*SHFWNL Trigger: GAGGTTCCAGAAATGGCTGCAGGCCAAGCGCCTCAC...TAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | ACAGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCCAGGATGATGGGGTGTaGGTTGACAGCCAGCGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TENGGSKILSVHTWSSCVQDDGV*VDSQRV Trigger: TACACGCTGGCTGTCAACGCACACCCCATCATCCTG...GACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | ATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTCATTGGCCAGCCCTCTaGTCCAGGGAAGATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IWDFLTCPICVCFWNMFCHWPAL*SREDLQ Trigger: CTGCAGATCTTCCCTGGAGCAGAGGGCTGGCCAATG...ACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | CTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATTGTATTTCTGGGGGAGGCAGTCCCAGGTaGGAAGCCAGTGAGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSACVSGTCFVGHNCISGGGSPR*EASELS Trigger: TGACAACTCACTGGCTTCCCACCTGGGACTGCCTCC...CCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | ATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGCAATTTGGTACCTGCTaGCCAGTTGAGAAATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILSVHTWSSCVYLLTMPWQFGTC*PVEKSP Trigger: TGGAGATTTCTCAACTGGTCAGCAGGTACCAAATTG...CCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | CTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATTGTATTTCTGGGCTTCCTGCTTGTCGATaGTGCCTAGCGCACTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSACVSGTCFVGHNCISGLPACR*CLAHWH Trigger: ATGCCAGTGCGCTAGGCATCATCGACAAGCAGGAAG...CCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | GTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTTCTAGCAAATGGATGTCCCGATaGAGGCATTGCATTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: VHTWSSCVYLLTMPWCSSKWMSR*RHCIYQ Trigger: TTGATAAATGCAATGCCTGCATCGGGACATCCATTT...GCTAGAACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | ATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTGTCTGGTACTGGTACTaGCCAGGAATCTACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: IWDFLTCPICVCFWNMFCVWYWY*PGIYHR Trigger: CCTGTGGTAGATTCCTGGTCAGTACCAGTACCAGAC...ACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAGGAGGGAGAGAAGCTaGCAAGGAGAAAGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TFLLALSACVSGTCFVGHRRERS*QGERTA Trigger: AGCTGTTCTTTCTCCTTGCCAGCTTCTCTCCCTCCT...GTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | ATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTCACCGGCAGTGAAGTaGTCCATGAAGATGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: IWDFLTCPICVCFWNMFCSPAVK*SMKMLP Trigger: TGGCAGCATCTTCATGGACCACTTCACTGCCGGTGA...ACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATCACAGGAGGACAGCTaGATCTGGCAGTCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: FLTCPICVCFWNMFCWSQSQEDS*IWQSET Trigger: GGTTTCTGACTGCCAGATCCAGCTGTCCTCCTGTGA...TTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR TCA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTCAGGTGGGAAGCCAGTaGGTTGTCAAACCTTATTTC | + |
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Preference number: 4 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVQVGSQ*VVKPYF Trigger: GAAATAAGGTTTGACAACTCACTGGCTTCCCACCTG...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | ACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACTCCCGATGCAGGCATTaGATTTATCAAGACCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TFLLALSACVSGTCFVGHSRCRH*IYQDRG Trigger: TCCTCGGTCTTGATAAATGCAATGCCTGCATCGGGA...GTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | ATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGCTGTTTTCTGAAGGATaGGCTCAATGCTGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: MGLSYLPYLRVFLEHVLLLFSEG*AQCCRS Trigger: AGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAG...CAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| 3UTR CAA 72 bp | TTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTaGGTCACAATTGTATTTCTGGGCTCCTTACACCTC | + |
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Preference number: 4 (lower is better) Translates to: LPYLRVFLEHVL*VTIVFLGSLHL Trigger: GAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR GCA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTCTCGGATGAACAGATaGCCATTGTCAAAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVSRMNR*PLSKMP Trigger: TGGCATCTTTGACAATGGGCATCTGTTCATCCGAGA...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTTACATTTTCTCCAGTCCTaGCAGCTGCTTGGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFVGHNCISGLLTPLFSLHFLQS*QLLGCL Trigger: AAGGCAGCCAAGCAGCTGCCAGGACTGGAGAAAATG...TAAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| 3UTR CAA 72 bp | TACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTaGTTGGTCACAATTGTATTTCTGGGCTCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPYLRVFLEHV*LVTIVFLGSLH Trigger: GTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CCA 90 bp | ATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGAGAACTTCTTACAAATaGATGTCCCGATGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MGLSYLPYLRVFLEHVLLRTSYK*MSRCRH Trigger: ATGCCTGCATCGGGACATCCATTTGTAAGAAGTTCT...CAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CCA 90 bp | ATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTGTCAGCAGCTTGCTCTaGAGAGGCATCATAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IWDFLTCPICVCFWNMFCVSSLL*RGIIKF Trigger: GAATTTTATGATGCCTCTCCAGAGCAAGCTGCTGAC...ACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGTCAAACATGCAGTGTCAAAGTTTCTCCCACAAGTTTTGTGTGTTTCTGATGCCAAACATGCCTaGATCAACATGGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SEVKHAVSKFLPQVLCVSDAKHA*INMGEI Trigger: TATTTCACCCATGTTGATGCAGGCATGTTTGGCATC...AGAAACACACAAAACTTGTGGGAGAAACTTTGACACTGCATGTTTGACCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTGAGTCTATTTCCTTTTaGACAGGGGAGGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRKWRFKDIECSHLVFLCESISF*TGEGNF Trigger: AAAGTTTCCCTCCCCTGTGCAAAAGGAAATAGACTC...ACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CCA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTATAAAATTCTTGCAATaGTCTGGTACTGGTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVIKFLQ*SGTGTD Trigger: GTCAGTACCAGTACCAGACCATTGCAAGAATTTTAT...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| 3UTR CAA 72 bp | CTGGTAAAATATACAGAAAATGGAGGTTCAAAGATATaGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVKYTENGGSKI*SVHTWSSCVYL Trigger: GAGGTAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCTGTATATTTTACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| 3UTR CAA 72 bp | TGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATaGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCFWNMFCWSQ*YFWAPYTSVFF Trigger: AAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTAGGTTTTAGAGTCATCTaGGTAATTTGCAGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKWRFKDIECSHLVFLCLGFRVI*VICSIR Trigger: TCTTATGCTGCAAATTACTCAGATGACTCTAAAACC...TAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTTAATCTATCATTATACTTaGAGTCTGGGTAACGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFVGHNCISGLLTPLFSLIYHYT*SLGNGR Trigger: CCTACCGTTACCCAGACTGCAAGTATAATGATAGAT...TAAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 90 bp | GAATCTACCACAGGAGCCCAGGTACCTGGGCATTGGCCAGCCCTCTaGTCCAGGGAAGATCTGCAGGATGATGGGGTGTGCGTTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESTTGAQVPGHWPAL*SREDLQDDGVCVDS Trigger: GCTGTCAACGCACACCCCATCATCCTGCAGATCTTCCCTGGAGCAGAGGGCTGGCCAATGCCCAGGTACCTGGGCTCCTGTGGTAGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS TCA 90 bp | GTGAGGCGCTTGGCCTGCAGCCATTTCTGGAACCTCCCTGTTTTCTaGAGGATGCGCTCAATGCTGCAGGTCTTTGGTGCTGATACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRRLACSHFWNLPVF*RMRSMLQVFGADTE Trigger: CTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGAAATGGCTGCAGGCCAAGCGCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 90 bp | GCTTGGCCTGCAGCCATTTCTGGAACCTCCCTGTTTTCTGAAGGATaGGCTCAATGCTGCAGGTCTTTGGTGCTGATACAGAGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWPAAISGTSLFSEG*AQCCRSLVLIQRHR Trigger: TCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGAAATGGCTGCAGGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 90 bp | CTGGAGAGGCATCATAAAATTCTTGCAATGGTCTGGTACTGGTACTaGCCAGGAATCTACCACAGGAGCCCAGGTACCTGGGCATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LERHHKILAMVWYWY*PGIYHRSPGTWALA Trigger: GGCCAATGCCCAGGTACCTGGGCTCCTGTGGTAGATTCCTGGTCAGTACCAGTACCAGACCATTGCAAGAATTTTATGATGCCTCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 90 bp | GCCATTTCTGGAACCTCCCTGTTTTCTGAAGGATGCGCTCAATGCTaGAGGTCTTTGGTGCTGATACAGAGGCACAGATCCTCCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AISGTSLFSEGCAQC*RSLVLIQRHRSSCQ Trigger: CTGACAGGAGGATCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGAAATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 90 bp | GCAGCCATTTCTGGAACCTCCCTGTTTTCTGAAGGATGCGCTCAATaGTGCAGGTCTTTGGTGCTGATACAGAGGCACAGATCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAISGTSLFSEGCAQ*CRSLVLIQRHRSSC Trigger: ACAGGAGGATCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGAAATGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACCCAGGTACCTGGGCATaGGCCAGCCCTCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLALSACVSGTCFVGHPGTWA*ASPLLQ Trigger: CTGGAGCAGAGGGCTGGCCAATGCCCAGGTACCTGG...GTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CAA 90 bp | GTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTTCTAGCTCTGTGCTGTTATCCTaGCTGCACAGGCTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHTWSSCVYLLTMPWCSSSVLLS*LHRLRA Trigger: TGCTCTCAGCCTGTGCAGCAAGGATAACAGCACAGA...GCTAGAACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 90 bp | AGAAGAAATAGTTCAAGTCATTGCTCCTCAGGGATTCCAGGACCCTaGGGAGTTGGTAGGCAAGGTCAGCAGCTTGCTCTGGAGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRNSSSHCSSGIPGP*GVGRQGQQLALERH Trigger: ATGCCTCTCCAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCCTGAGGAGCAATGACTTGAACTATTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 90 bp | TGCTTGTCGATGATGCCTAGCGCACTGGCATCTCGGATGAACAGATaGCCATTGTCAAAGATGCCAAACATGCCTGCATCAACATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSMMPSALASRMNR*PLSKMPNMPASTWV Trigger: CACCCATGTTGATGCAGGCATGTTTGGCATCTTTGACAATGGGCATCTGTTCATCCGAGATGCCAGTGCGCTAGGCATCATCGACAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGTCAGGTGTGAGGCGCTaGGCCTGCAGCCATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGLSYLPYLRVFLEHVLLSGVRR*ACSHFW Trigger: CCAGAAATGGCTGCAGGCCAAGCGCCTCACACCTGA...CAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CAA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCAAGTCCTGGCAGCTGCTaGGCTGCCTTCCTGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DFLTCPICVCFWNMFCWSSPGSC*AAFLLV Trigger: GACAAGCAGGAAGGCAGCCAAGCAGCTGCCAGGACT...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 90 bp | CCCTGTTTTCTGAAGGATGCGCTCAATGCTGCAGGTCTTTGGTGCTaGTACAGAGGCACAGATCCTCCTGTCAGAGATCTCAATTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PCFLKDALNAAGLWC*YRGTDPPVRDLNLV Trigger: TACCAAATTGAGATCTCTGACAGGAGGATCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CCA 90 bp | AGCACAAGGCTTTGCTTCTCAGGGACAGTGTCACAGGAGGACAGCTaGATCTGGCAGTCAGAAACCAGGCAGCTAAAAATGTCTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: STRLCFSGTVSQEDS*IWQSETRQLKMSSF Trigger: AAATGAAGACATTTTTAGCTGCCTGGTTTCTGACTGCCAGATCCAGCTGTCCTCCTGTGACACTGTCCCTGAGAAGCAAAGCCTTGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTAAGAACAGCTCAGGGTaGAGACCCACAGCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVKNSSG*RPTAAA Trigger: GGCTGCTGCTGTGGGTCTCAACCCTGAGCTGTTCTT...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | CAACATATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTGTCCCGATGCAGGCATaGCATTTATCAAGACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHMGLSYLPYLRVFLEHVVPMQA*HLSRPR Trigger: CCTCGGTCTTGATAAATGCAATGCCTGCATCGGGAC...AACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCATATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | CTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATTGTATTTCTGGGGTACCTGCTGACCAGTaGAGAAATCTCCACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSACVSGTCFVGHNCISGVPADQ*RNLHRA Trigger: CGCCCTGTGGAGATTTCTCAACTGGTCAGCAGGTAC...CCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | TTGAGTGTTCACACCTGGTCTTCCTGTGTCTACCTCCTGACTATGCCATGGTGTGGCATCATAAAATTCTaGCAATGGTCTGGTACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVHTWSSCVYLLTMPWCGIIKF*QWSGTG Trigger: ACCAGTACCAGACCATTGCAAGAATTTTATGATGCC...ACACCATGGCATAGTCAGGAGGTAGACACAGGAAGACCAGGTGTGAACACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | CTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACAATTGTATTTCTGGGGGCAAGGTCAGCAGCTaGCTCTGGAGAGGCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: LSACVSGTCFVGHNCISGGKVSS*LWRGII Trigger: TATGATGCCTCTCCAGAGCAAGCTGCTGACCTTGCC...CCCAGAAATACAATTGTGACCAACAAAACATGTTCCAGAAACACACGCAGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | TGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTTACAGGACCCTGAGGAGTaGGTAGGCAAGGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFVGHNCISGLLTPLFSLQDPEE*VGKVSS Trigger: GCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTG...TAAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTTGTTGGTCACAATTGTATTTCTGGGCTCCTTACACCTCTGTTTTCTTTCACCAGCACAAGGCTTaGCTTCTCAGGGACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MFCWSQLYFWAPYTSVFFHQHKA*LLRDSV Trigger: GACACTGTCCCTGAGAAGCAAAGCCTTGTGCTGGTG...AAAGAAAACAGAGGTGTAAGGAGCCCAGAAATACAATTGTGACCAACAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 90 bp | GATGCCCATTGTCAAAGATGCCAAACATGCCTGCATCAACATGGGTaGAATAGAAGAAATAGTTCAAGTCATTGCTCCTCAGGGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DAHCQRCQTCLHQHG*NRRNSSSHCSSGIP Trigger: TGGAATCCCTGAGGAGCAATGACTTGAACTATTTCTTCTATTTCACCCATGTTGATGCAGGCATGTTTGGCATCTTTGACAATGGGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | GACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCAAGAGTCTATTTCCTTTaGCACAGGGGAGGGAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: DFLTCPICVCFWNMFCWSRVYFL*HRGGKL Trigger: AAGTTTCCCTCCCCTGTGCAAAAGGAAATAGACTCT...TGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | ATGGGACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGTGGGAAGCCAGTGAGTaGTCAAACCTTATTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MGLSYLPYLRVFLEHVLLWEASE*SNLISS Trigger: AGAAGAAATAAGGTTTGACAACTCACTGGCTTCCCA...CAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTTACTTGCCCTATCTGCGTGTGTTTCTGGAACATGTTTTGTTGGTCACATGAACAGATGCCCATaGTCAAAGATGCCAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLALSACVSGTCFVGHMNRCP*SKMPNM Trigger: CATGTTTGGCATCTTTGACAATGGGCATCTGTTCAT...GTGACCAACAAAACATGTTCCAGAAACACACGCAGATAGGGCAAGTAAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS-3UTR CAA 90 bp | AGAAAATGGAGGTTCAAAGATATTGAGTGTTCACACCTGGTCTTCCTGTGTCTAAGTCATCTGAGTAATTaGCAGCATAAGAATGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RKWRFKDIECSHLVFLCLSHLSN*QHKNAS Trigger: ACTTGCATTCTTATGCTGCAAATTACTCAGATGACT...TAGACACAGGAAGACCAGGTGTGAACACTCAATATCTTTGAACCTCCATTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS CCA 72 bp | GTTGAGACCCACAGCAGCAGCCGGGCTAGCCAGTGTTaGTGGAAGGCGGTAGCTGCAGCACCACGCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: VETHSSSRASQC*WKAVAAAPRHW Trigger: CCAATGGCGTGGTGCTGCAGCTACCGCCTTCCACCAACACTGGCTAGCCCGGCTGCTGCTGTGGGTCTCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS CAA 72 bp | GTCATTGCTCCTCAGGGATTCCAGGACCCTGAGGAGTaGGTAGGCAAGGTCAGCAGCTTGCTCTGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VIAPQGFQDPEE*VGKVSSLLWRG Trigger: GCCTCTCCAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCCTGAGGAGCAATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS TCA 72 bp | AGTTCAAGTCATTGCTCCTCAGGGATTCCAGGACCCTaGGGAGTTGGTAGGCAAGGTCAGCAGCTTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSHCSSGIPGP*GVGRQGQQLAL Trigger: CAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCCTGAGGAGCAATGACTTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 72 bp | GGAACCTCCCTGTTTTCTGAAGGATGCGCTCAATGCTaGAGGTCTTTGGTGCTGATACAGAGGCACAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GTSLFSEGCAQC*RSLVLIQRHRS Trigger: GGATCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS CAA 90 bp | CAGGGATTCCAGGACCCTGAGGAGTTGGTAGGCAAGGTCAGCAGCTaGCTCTGGAGAGGCATCATAAAATTCTTGCAATGGTCTGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: QGFQDPEELVGKVSS*LWRGIIKFLQWSGT Trigger: AGTACCAGACCATTGCAAGAATTTTATGATGCCTCTCCAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS CAA 90 bp | AGCCAACTGGTAGCCCCAAGAACTTCTAGGTCTGTGCTGTTATCCTaGCTGCACAGGCTGAGAGCAGAGTCTATTTCCTTTTGCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLVAPRTSRSVLLS*LHRLRAESISFCTG Trigger: CCCTGTGCAAAAGGAAATAGACTCTGCTCTCAGCCTGTGCAGCAAGGATAACAGCACAGACCTAGAAGTTCTTGGGGCTACCAGTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 72 bp | TCTGGAACCTCCCTGTTTTCTGAAGGATGCGCTCAATaGTGCAGGTCTTTGGTGCTGATACAGAGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGTSLFSEGCAQ*CRSLVLIQRHR Trigger: TCTGTGCCTCTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS GCA 72 bp | GCAGCCATTTCTGGAACCTCCCTGTTTTCTGAAGGATaGGCTCAATGCTGCAGGTCTTTGGTGCTGATACAG | + |
|
Preference number: 6 (lower is better) Translates to: AAISGTSLFSEG*AQCCRSLVLIQ Trigger: CTGTATCAGCACCAAAGACCTGCAGCATTGAGCGCATCCTTCAGAAAACAGGGAGGTTCCAGAAATGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
||
| CDS CAA 72 bp | CAGGACCCTGAGGAGTTGGTAGGCAAGGTCAGCAGCTaGCTCTGGAGAGGCATCATAAAATTCTTGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: QDPEELVGKVSS*LWRGIIKFLQW Trigger: CCATTGCAAGAATTTTATGATGCCTCTCCAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | CCTAGCGCACTGGCATCTCGGATGAACAGATGCCCATaGTCAAAGATGCCAAACATGCCTGCATCAACATGG | + |
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Preference number: 6 (lower is better) Translates to: PSALASRMNRCP*SKMPNMPASTW Trigger: CCATGTTGATGCAGGCATGTTTGGCATCTTTGACAATGGGCATCTGTTCATCCGAGATGCCAGTGCGCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | CTTGCTGCACAGGCTGAGAGCAGAGTCTATTTCCTTTaGCACAGGGGAGGGAAACTTTCCCTGGAGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LAAQAESRVYFL*HRGGKLSLEKL Trigger: CAACTTCTCCAGGGAAAGTTTCCCTCCCCTGTGCAAAAGGAAATAGACTCTGCTCTCAGCCTGTGCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 90 bp | ATAGTTCAAGTCATTGCTCCTCAGGGATTCCAGGACCCTGAGGAGTaGGTAGGCAAGGTCAGCAGCTTGCTCTGGAGAGGCATCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: IVQVIAPQGFQDPEE*VGKVSSLLWRGIIK Trigger: TTTTATGATGCCTCTCCAGAGCAAGCTGCTGACCTTGCCTACCAACTCCTCAGGGTCCTGGAATCCCTGAGGAGCAATGACTTGAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 72 bp | AGATCCTCCTGTCAGAGATCTCAATTTGGTACCTGCTaGCCAGTTGAGAAATCTCCACAGGGCGCCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RSSCQRSQFGTC*PVEKSPQGARF Trigger: AAACCTGGCGCCCTGTGGAGATTTCTCAACTGGTCAGCAGGTACCAAATTGAGATCTCTGACAGGAGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS GCA 72 bp | ATGATGCCTAGCGCACTGGCATCTCGGATGAACAGATaGCCATTGTCAAAGATGCCAAACATGCCTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: MMPSALASRMNR*PLSKMPNMPAS Trigger: TGATGCAGGCATGTTTGGCATCTTTGACAATGGGCATCTGTTCATCCGAGATGCCAGTGCGCTAGGCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | CCTGTCAGAGATCTCAATTTGGTACCTGCTGACCAGTaGAGAAATCTCCACAGGGCGCCAGGTTTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PVRDLNLVPADQ*RNLHRAPGFRV Trigger: GACTCTAAAACCTGGCGCCCTGTGGAGATTTCTCAACTGGTCAGCAGGTACCAAATTGAGATCTCTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 90 bp | GTAGGCAAGGTCAGCAGCTTGCTCTGGAGAGGCATCATAAAATTCTaGCAATGGTCTGGTACTGGTACTGACCAGGAATCTACCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: VGKVSSLLWRGIIKF*QWSGTGTDQESTTG Trigger: TCCTGTGGTAGATTCCTGGTCAGTACCAGTACCAGACCATTGCAAGAATTTTATGATGCCTCTCCAGAGCAAGCTGCTGACCTTGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS TCA 72 bp | CTGTCAGAGATCTCAATTTGGTACCTGCTGACCAGTTaGGAAATCTCCACAGGGCGCCAGGTTTTAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSEISIWYLLTS*EISTGRQVLES Trigger: TGACTCTAAAACCTGGCGCCCTGTGGAGATTTCTCAACTGGTCAGCAGGTACCAAATTGAGATCTCTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | GTAGCCCCAAGAACTTCTAGGTCTGTGCTGTTATCCTaGCTGCACAGGCTGAGAGCAGAGTCTATTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VAPRTSRSVLLS*LHRLRAESISF Trigger: AAAGGAAATAGACTCTGCTCTCAGCCTGTGCAGCAAGGATAACAGCACAGACCTAGAAGTTCTTGGGGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | GTCAGCAGCTTGCTCTGGAGAGGCATCATAAAATTCTaGCAATGGTCTGGTACTGGTACTGACCAGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: VSSLLWRGIIKF*QWSGTGTDQES Trigger: AGATTCCTGGTCAGTACCAGTACCAGACCATTGCAAGAATTTTATGATGCCTCTCCAGAGCAAGCTGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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| CDS CAA 72 bp | AAGAACTTCTTACAAATGGATGTCCCGATGCAGGCATaGCATTTATCAAGACCGAGGAATGTCTTTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: KNFLQMDVPMQA*HLSRPRNVFPI Trigger: TATGGGAAAGACATTCCTCGGTCTTGATAAATGCAATGCCTGCATCGGGACATCCATTTGTAAGAAGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044188.5 |
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