Pregenerated sensors for DIPK2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045414Ensembl transcript IDs: ENSMUST00000113028.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATGGGAAGGGGAAAAGCAGTCAATGGTATCTCAATCTCCAAAGTaGAGAACAGACTTGCAGAAGCGTCGTGAGAACGTTGATGTACAG | + |
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Preference number: 1 (lower is better) Translates to: VWEGEKQSMVSQSPK*RTDLQKRRENVDVQ Trigger: CTGTACATCAACGTTCTCACGACGCTTCTGCAAGTCTGTTCTTCACTTTGGAGATTGAGATACCATTGACTGCTTTTCCCCTTCCCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR TCA 90 bp | ATTTCAACTGAAGAAGTACCTATGCTAACACGTTTGATATGGTCTTaGCCATGTCTGTTCAGATGGTGCACAGCAGCTACAAGTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ISTEEVPMLTRLIWS*PCLFRWCTAATSAP Trigger: AGGAGCACTTGTAGCTGCTGTGCACCATCTGAACAGACATGGTCAAGACCATATCAAACGTGTTAGCATAGGTACTTCTTCAGTTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR GCA 90 bp | AAAAGCAGTCAATGGTATCTCAATCTCCAAAGTGAAGAACAGACTTaGAGAAGCGTCGTGAGAACGTTGATGTACAGTAATGTCTTATTT | + |
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Preference number: 1 (lower is better) Translates to: KSSQWYLNLQSEEQT*RSVVRTLMYSNVLF Trigger: AAATAAGACATTACTGTACATCAACGTTCTCACGACGCTTCTGCAAGTCTGTTCTTCACTTTGGAGATTGAGATACCATTGACTGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR CCA 90 bp | GGACAGGTAGATCTTAATTTACGAGTGACAGCTAAAATACTGAAGTaGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGG | + |
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Preference number: 1 (lower is better) Translates to: GQVDLNLRVTAKILK*DTKVTNSIFSSKHR Trigger: CCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCACTTCAGTATTTTAGCTGTCACTCGTAAATTAAGATCTACCTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACTCATCCACTCAGGTATaGGAAGGGGAAAAGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDSSTQV*EGEKQS Trigger: TGACTGCTTTTCCCCTTCCCATACCTGAGTGGATGA...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACCGTTTGATATGGTCTTaGCCATGTCTGTTCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDRLIWS*PCLFRW Trigger: CCATCTGAACAGACATGGTCAAGACCATATCAAACG...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGTACCAAGTACCCTTTaGTACACAAGCCATGTAACT | + |
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Preference number: 2 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDVPSTL*YTSHVT Trigger: AGTTACATGGCTTGTGTATCAAAGGGTACTTGGTAC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGGGAAAAGCAGTCAATaGTATCTCAATCTCCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDGKSSQ*YLNLQS Trigger: ACTTTGGAGATTGAGATACCATTGACTGCTTTTCCC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTGATGTTATCATGCAGTaGAAAAGCATAGAAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSDVIMQ*KSIEGW Trigger: CCAGCCTTCTATGCTTTTCCACTGCATGATAACATC...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTATCAGAAGGAAAATGTaGCCTATAAAACAGGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSIRRKM*PIKQAN Trigger: ATTGGCCTGTTTTATAGGCCACATTTTCCTTCTGAT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAAAAGCATAGAAGGCTaGGGAGAGGCAAATTATTTA | + |
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Preference number: 2 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSKSIEG*GEANYL Trigger: TAAATAATTTGCCTCTCCCCAGCCTTCTATGCTTTT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR GCA 72 bp | AGTAGCCATCACTGCCTGGAAGGCTTCTTGACTTCTTaGTCTGTAACCACAACCACAGTCACTCCCCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SSHHCLEGFLTS*SVTTTTVTPQK Trigger: TTTTTGGGGAGTGACTGTGGTTGTGGTTACAGAGCAAGAAGTCAAGAAGCCTTCCAGGCAGTGATGGCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR TCA 72 bp | AAGAAATTCCACATCCTCTCTAATGGTAGTTATACCTaGAGTAGCCATCACTGCCTGGAAGGCTTCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: KKFHILSNGSYT*SSHHCLEGFLT Trigger: AGTCAAGAAGCCTTCCAGGCAGTGATGGCTACTTCAGGTATAACTACCATTAGAGAGGATGTGGAATTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAGTACCAAGTACCCTTaGATACACAAGCCATGTAAC | + |
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Preference number: 3 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSTKYP*IHKPCN Trigger: GTTACATGGCTTGTGTATCAAAGGGTACTTGGTACT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR TCA 72 bp | TTAGCAAAGGATGCAGTGACGTTTTGTAGCATATGCTaGACATCATGTTCAGTGTATACCTGTAATTACTGG | + |
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Preference number: 3 (lower is better) Translates to: LAKDAVTFCSIC*TSCSVYTCNYW Trigger: CCAGTAATTACAGGTATACACTGAACATGATGTTCAGCATATGCTACAAAACGTCACTGCATCCTTTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTTTGGTGGTTTAGTTTaGTCAGTGCTTTTTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSFGGLV*SVLFQQ Trigger: TTGCTGAAAAAGCACTGACAAAACTAAACCACCAAA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| 3UTR CCA 72 bp | GATCTTAATTTACGAGTGACAGCTAAAATACTGAAGTaGGATACGAAGGTGACCAATTCTATTTTCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: DLNLRVTAKILK*DTKVTNSIFSS Trigger: AGAACTGAAAATAGAATTGGTCACCTTCGTATCCCACTTCAGTATTTTAGCTGTCACTCGTAAATTAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGTGCGGGGCATGGCCTaGAGCAGGTCGCAGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDVRGMA*SRSQRG Trigger: GCCGCGCTGCGACCTGCTCCAGGCCATGCCCCGCAC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR TCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGCCGCACGTCGCCGTTaGGACGCGCGAACTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDAARRR*DARTRC Trigger: GCACCGAGTTCGCGCGTCTCAACGGCGACGTGCGGC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGGCGGCACCAGCTCGTaGCGAAGCACGCCGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDGGTSS*RSTPGT Trigger: AGTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACAGCGCGGCCGGCCGGTaGCCCGCTTGCAGATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDSAAGR*PACRCS Trigger: AGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGCGAGCTCGTTGCGCTaGCAGGAGGCGAGCAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDASSLR*QEASSD Trigger: GTCGCTGCTCGCCTCCTGGCAGCGCAACGAGCTCGC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACTGCGCCAGCTCGCGCTaGGAACCCAGGCGCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDCASSR*EPRRLS Trigger: GCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCA...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACCGCTGCGAGGGGCAGTaGACCAGGTCCGACCAACCC | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDRCEGQ*TRSDQP Trigger: GGGTTGGTCGGACCTGGTGCACTGCCCCTCGCAGCG...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGCGCCGCCAGCTTCAGTaGACGGGACAGGCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQRRQLQ*TGQAAQ Trigger: CTGGGCCGCCTGTCCCGTGCACTGAAGCTGGCGGCG...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGGCCGGTGGCCCGCTTaGAGATGCTCTGGTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDGRWPA*RCSGRA Trigger: AGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR TCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACACGCCGGGCACTTATTaGGCTGCAGGAAGCGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDTPGTY*AAGSAG Trigger: ACCGGCGCTTCCTGCAGCTCAATAAGTGCCCGGCGT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAGCCCACCTGGCCGTTaGGGAAACGGCGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQSPPGR*GNGGTS Trigger: GCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR TCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTCCACCGCCTCCGGCGTaGGCAGCCGCACGTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSPPPPA*AAARRR Trigger: ACGGCGACGTGCGGCTGCTCACGCCGGAGGCGGTGG...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACATGCTCTGGTCGAGCTaGGCCAGCTCGCGCTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDMLWSS*ASSRCE Trigger: TTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCAT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGTGGCCCGCTTGCAGATaGTCTGGTCGAGCTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQWPACR*SGRAAP Trigger: TGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCA...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTCGGTCCAGCAGGCGCTaGGAGGGGCAGTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSRSSRR*EGQCTR Trigger: CCTGGTGCACTGCCCCTCGCAGCGCCTGCTGGACCG...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGGGAGTCCTCCAGAAGTaGCGCGCCAGGTGGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQGVLQK*RARWHV Trigger: GACATGCCACCTGGCGCGGCACTTCTGGAGGACTCC...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGCCACGCAGTTCTTTTaGGGCCTGGAACCGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDATQFF*GLEPAI Trigger: TATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGGTCTCGAAGCCCACCTaGCCGTTGAGGAAACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQVSKPT*PLRKRR Trigger: CCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGAC...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTGACGCGCGAACTCGGTaGGGGGCATGGCCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSDARTR*GAWPGA Trigger: TGCTCCAGGCCATGCCCCGCACCGAGTTCGCGCGTC...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAGGGTGAGCAGCAGCTaGATGCGCTCGGAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQRVSSS*MRSESL Trigger: CAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTACTCGGTGCGGGGCATaGCCTGGAGCAGGTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSTRCGA*PGAGRS Trigger: GCTGCGACCTGCTCCAGGCCATGCCCCGCACCGAGT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACAGCGTTTCTTGGGGTTaGTGCACTCATCCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDSVSWG*CTHPAR Trigger: CCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGACACGTTCTTCACGTTaGGGAAGTCCAGCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQTRSSR*GSPAGA Trigger: TGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTCAGCACCAACAGGCTaGCGAGCGCCGCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSAPTG*RAPPAS Trigger: TGAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTGA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTGGGCACTTATTGAGCTaGAGGAAGCGCCGGTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSGHLLS*RKRRSA Trigger: CGCCGACCGGCGCTTCCTGCAGCTCAATAAGTGCCC...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTCGCTTGCAGATGCTCTaGTCGAGCTGCGCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSRLQML*SSCASS Trigger: CGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCG...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAACTGCCCGAGTCCTTaGTCTCCGCGTAGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSNCPSP*SPRSGA Trigger: TGCGCCGCTACGCGGAGACCAAGGACTCGGGCAGTT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR CCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGGCAATTTCACTTGGTaGATCATGGAGGAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDGNFTW*IMEESS Trigger: GGAGGACTCCTCCATGATCCACCAAGTGAAATTGCC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAGCAGCGACGGCGAGTaGAGCAGCATCAGCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSSDGE*SSISTN Trigger: GTTGGTGCTGATGCTGCTGCACTCGCCGTCGCTGCT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTCGGGGCTCGCCGTACTaGGCGAAGTACACGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSRGSPY*AKYTFF Trigger: GAAGAACGTGTACTTCGCGCAGTACGGCGAGCCCCG...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGGTTTCTTGGGGTTGGTaGACTCATCCAGCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQVSWGW*THPARP Trigger: AGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAAC...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGCAAAGTTGTCAAAGCTaGCGTCCAGGAGGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQQSCQS*RPGGRV Trigger: CACTCTACCTCCTGGACGTCAGCTTTGACAACTTTG...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTACGCAGCAGGAAACTaGCCGAGTCCTTGGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSYAAGN*PSPWSP Trigger: CGGAGACCAAGGACTCGGGCAGTTTCCTGCTGCGTA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACCACAATCGTCAAACTTaGTTTCATACCATACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDHNRQT*FHTIRP Trigger: GGGACGTATGGTATGAAAGCAAGTTTGACGATTGTG...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAAGTGCCGCGCCAGGTaGCATGTCTGGATAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSKCRAR*HVWIRG Trigger: ACCTCTTATCCAGACATGCCACCTGGCGCGGCACTT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGCCAGTCGGCCATCTTTaGCAATTTCACTTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQPVGHL*QFHLVD Trigger: ATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGG...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGGCTATCTCCATTAACTaGCAAGCAAGGTCAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQAISIN*QARSTL Trigger: GAGAGTTGACCTTGCTTGGCAGTTAATGGAGATAGC...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGTCCAGGAGGTAGAGTaGAAATTCAAAGTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDVQEVE*KFKVIV Trigger: AACAATGACTTTGAATTTGCACTCTACCTCCTGGAC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGTTTCGGCATCCACAATaGTTACTTTCCCATCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQFRHPQ*LLSHLL Trigger: CAAGAGATGGGAAAGTAATCATTGTGGATGCCGAAA...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTCACTTGGTGGATCATaGAGGAGTCCTCCAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSLGGS*RSPPEV Trigger: CACTTCTGGAGGACTCCTCCATGATCCACCAAGTGA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR TCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTAATTGTGGTCCACAGTaGCACGAGCACAGAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSNCGPQ*HEHRGF Trigger: AAATCCTCTGTGCTCGTGTCACTGTGGACCACAATT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAGCTCCAAGATATTTTaGAAATGGCCAACCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQSSKIF*KWPTFI Trigger: GATGAAGGTTGGCCATTTGCAAAATATCTTGGAGCT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGTCTCTTCTCCCATGGTaGATTAAAATAACTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQSLLPW*IKITPQ Trigger: CTGTGGAGTTATTTTAATGCACCATGGGAGAAGAGA...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTGCCAGGTGGCATGTCTaGATAAGAGGTTCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSARWHV*IRGSDK Trigger: TTTGTCAGAACCTCTTATCCAGACATGCCACCTGGC...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAAGATATTTTGCAAATaGCCAACCTTCATCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQKIFCK*PTFIRW Trigger: CCATCTGATGAAGGTTGGCCATTTGCAAAATATCTT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAACTCTCTTCTCCCATaGTGCATTAAAATAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKFIILEAILPHFVYSRQNSLLP*CIKITP Trigger: TGGAGTTATTTTAATGCACCATGGGAGAAGAGAGTT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTATCTCTTGGACCAACTaGAAAGTTGTCAAAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSISWTN*KVVKAD Trigger: GTCAGCTTTGACAACTTTGCAGTTGGTCCAAGAGAT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS TCA 90 bp | TGCTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCTTaGGCACCACGCGCCGGCGGCCGCCCTCGCGGGGCTCGCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CSGRAAPARAANPGA*APRAGGRPRGARRT Trigger: AGTACGGCGAGCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | CGGTGCGGGGCATGGCCTGGAGCAGGTCGCAGCGCGGCCGGCCGGTaGCCCGCTTGCAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCGAWPGAGRSAAGR*PACRCSGRAAPARA Trigger: AGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGCCCCGCACCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | GTGGCCCGCTTGCAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCTaGGAACCCAGGCGCTTGAGCACCACGCGCCGGCGGCCGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VARLQMLWSSCASSR*EPRRLSTTRRRPPS Trigger: CGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | CAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATGCTCTGGTCGAGCTaGGCCAGCTCGCGCTGCGAACCCAGGCGCTTGAGCACCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QRGRPVARLQMLWSS*ASSRCEPRRLSTTR Trigger: GCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | CCTGGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATaGTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAGRSAAGRWPACR*SGRAAPARAANPGA Trigger: AGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | CGCACGTCGCCGTTGAGACGCGCGAACTCGGTGCGGGGCATGGCCTaGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTSPLRRANSVRGMA*SRSQRGRPVARLQM Trigger: CATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGCCCCGCACCGAGTTCGCGCGTCTCAACGGCGACGTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | GCATGGCCTGGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTaGAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWPGAGRSAAGRWPA*RCSGRAAPARAANP Trigger: TGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | AGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATGCTCTaGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSQRGRPVARLQML*SSCASSRCEPRRLS Trigger: GCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS TCA 90 bp | CCAGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCCACCTGGCCGTTaGGGAAACGGCGGCACCAGCTCGTGCCGAAGCACGCCGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PAGAGGPTSRSPPGR*GNGGTSSCRSTPGT Trigger: AGTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | CGGCGGCACCAGCTCGTGCCGAAGCACGCCGGGCACTTATTGAGCTaGAGGAAGCGCCGGTCGGCGAGCTCGTTGCGCTGCCAGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRHQLVPKHAGHLLS*RKRRSASSLRCQEA Trigger: CGCCTCCTGGCAGCGCAACGAGCTCGCCGACCGGCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | AGGCGAGCAGCGACGGCGAGTGCAGCAGCATCAGCACCAACAGGCTaGCGAGCGCCGCCAGCTTCAGTGCACGGGACAGGCGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRAATASAAASAPTG*RAPPASVHGTGGPA Trigger: AGCTGGGCCGCCTGTCCCGTGCACTGAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTGATGCTGCTGCACTCGCCGTCGCTGCTCGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | TCGGCGAGCTCGTTGCGCTGCCAGGAGGCGAGCAGCGACGGCGAGTaGAGCAGCATCAGCACCAACAGGCTGCCGAGCGCCGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SASSLRCQEASSDGE*SSISTNRLPSAASF Trigger: GAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTGATGCTGCTGCACTCGCCGTCGCTGCTCGCCTCCTGGCAGCGCAACGAGCTCGCCGA 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | AGGAAGTCCAGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCCACCTaGCCGTTGAGGAAACGGCGGCACCAGCTCGTGCCGAAGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKSSRRRRPHVSKPT*PLRKRRHQLVPKHA Trigger: GGCGTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGGACTTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | CAGCAGCATCAGCACCAACAGGCTGCCGAGCGCCGCCAGCTTCAGTaGACGGGACAGGCGGCCCAGCTTCAGGGGCACCAGGCGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QQHQHQQAAERRQLQ*TGQAAQLQGHQAPH Trigger: ATGTGGCGCCTGGTGCCCCTGAAGCTGGGCCGCCTGTCCCGTGCACTGAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTGATGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | TTGAGCACCACGCGCCGGCGGCCGCCCTCGCGGGGCTCGCCGTACTaGGCGAAGTACACGTTCTTCACGTTGAGGAAGTCCAGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTTRRRPPSRGSPY*AKYTFFTLRKSSRR Trigger: GCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCGCGCAGTACGGCGAGCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS TCA 90 bp | CCTCGCGGGGCTCGCCGTACTGCGCGAAGTACACGTTCTTCACGTTaGGGAAGTCCAGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGARRTARSTRSSR*GSPAGAGGPTSRSP Trigger: TGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCGCGCAGTACGGCGAGCCCCGCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | TGTAGCACCAGCGGCTCGGGGTTGAAGGCCAGGGTGAGCAGCAGCTaGATGCGCTCGGAGTCCTTGAGGTTACGCAGCAGGAAACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSTSGSGLKARVSSS*MRSESLRLRSRKLP Trigger: GGGCAGTTTCCTGCTGCGTAACCTCAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCTGGCCTTCAACCCCGAGCCGCTGGTGCTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | AGCCACGCAGTTCTTTTGCGGCCTGGAACCGGCCATAGCGTTTCTTaGGGTTGGTGCACTCATCCAGCAAGGCCTCCAGTCGGCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SHAVLLRPGTGHSVS*GWCTHPARPPVGHL Trigger: AAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | ATCCAGCAAGGCCTCCAGTCGGCCATCTTTGGCAATTTCACTTGGTaGATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: IQQGLQSAIFGNFTW*IMEESSRSAAPGGM Trigger: CATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | GCAGTTCTTTTGCGGCCTGGAACCGGCCATAGCGTTTCTTGGGGTTaGTGCACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AVLLRPGTGHSVSWG*CTHPARPPVGHLWQ Trigger: TTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | AAGGCCTCCAGTCGGCCATCTTTGGCAATTTCACTTGGTGGATCATaGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTGGCATGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KASSRPSLAISLGGS*RSPPEVPRQVACLD Trigger: ATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | GTTCTTTTGCGGCCTGGAACCGGCCATAGCGTTTCTTGGGGTTGGTaGACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTTGGCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLRPGTGHSVSWGW*THPARPPVGHLWQF Trigger: AAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 90 bp | TGGGGTTGGTGCACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTTaGCAATTTCACTTGGTGGATCATGGAGGAGTCCTCCAGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGWCTHPARPPVGHL*QFHLVDHGGVLQKC Trigger: GCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACAGCCGCACGTCGCCGTaGAGACGCGCGAACTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDSRTSP*RRANSV Trigger: CACCGAGTTCGCGCGTCTCAACGGCGACGTGCGGCT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACCACGCCGGGCACTTATaGAGCTGCAGGAAGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDHAGHL*SCRKRR Trigger: CCGGCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTG...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACAAGCCCACCTGGCCGTaGAGGAAACGGCGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDKPTWP*RKRRHQ Trigger: CTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGCGGCCGGTGGCCCGCTaGCAGATGCTCTGGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QKFIILEAILPHFVYSRQRPVAR*QMLWSS Trigger: GCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCG...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | CTTTGGCAATTTCACTTGGTGGATCATGGAGGAGTCCTCCAGAAGTaGCGCGCCAGGTGGCATGTCTGGATAAGAGGTTCTGACAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LWQFHLVDHGGVLQK*RARWHVWIRGSDKR Trigger: CCGTTTGTCAGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 90 bp | GATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTGGCATGTCTaGATAAGAGGTTCTGACAAACGGCATAGTAATTGTGGTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DHGGVLQKCRARWHV*IRGSDKRHSNCGPQ Trigger: CTGTGGACCACAATTACTATGCCGTTTGTCAGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 90 bp | CACTTGGTGGATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTaGCATGTCTGGATAAGAGGTTCTGACAAACGGCATAGTAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLVDHGGVLQKCRAR*HVWIRGSDKRHSNC Trigger: ACAATTACTATGCCGTTTGTCAGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACTACACGTTCTTCACGTaGAGGAAGTCCAGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDYTFFT*RKSSRR Trigger: GCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTA...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTACCAGCGGCTCGGGGTaGAAGGCCAGGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSTSGSG*KARVSS Trigger: GCTGCTCACCCTGGCCTTCAACCCCGAGCCGCTGGT...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGAGCCACGCAGTTCTTTaGCGGCCTGGAACCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKFIILEAILPHFVYSRQSHAVL*RPGTGH Trigger: ATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGCT...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGGGACCAACTGCAAAGTaGTCAAAGCTGACGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKFIILEAILPHFVYSRQGPTAK*SKLTSR Trigger: CCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCC...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | TGGACCAACTGCAAAGTTGTCAAAGCTGACGTCCAGGAGGTAGAGTaGAAATTCAAAGTCATTGTTTGTAAGCTGCTCTGCTATCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTNCKVVKADVQEVE*KFKVIVCKLLCYLH Trigger: ATGGAGATAGCAGAGCAGCTTACAAACAATGACTTTGAATTTGCACTCTACCTCCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 90 bp | ATTTTCGGCATCCACAATGATTACTTTCCCATCTCTTGGACCAACTaGAAAGTTGTCAAAGCTGACGTCCAGGAGGTAGAGTGCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IFGIHNDYFPISWTN*KVVKADVQEVECKF Trigger: GAATTTGCACTCTACCTCCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCCAAGAGATGGGAAAGTAATCATTGTGGATGCCGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACAAGCTCCAAGATATTTaGCAAATGGCCAACCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDKLQDI*QMANLH Trigger: ATGAAGGTTGGCCATTTGCAAAATATCTTGGAGCTT...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAACCACAGTCACTCCCCAAAAACATGATGATGTTTGTGGAACCACAGACGCAAATTCAAAGTCATaGTTTGTAAGCTGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTTTVTPQKHDDVCGTTDANSKS*FVSCSA Trigger: AGCAGAGCAGCTTACAAACAATGACTTTGAATTTGC...GTCTGTGGTTCCACAAACATCATCATGTTTTTGGGGAGTGACTGTGGTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS TCA 90 bp | TGGATAAGAGGTTCTGACAAACGGCATAGTAATTGTGGTCCACAGTaGCACGAGCACAGAGGATTTCTTTTGAAAATGACAAGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WIRGSDKRHSNCGPQ*HEHRGFLLKMTSKL Trigger: AAGCTTGCTTGTCATTTTCAAAAGAAATCCTCTGTGCTCGTGTCACTGTGGACCACAATTACTATGCCGTTTGTCAGAACCTCTTATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTCCAGTCGGCCATCTTaGGCAATTTCACTTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSSRPS*AISLGG Trigger: TCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTTCATCATTCTCGAGGCCATACTTCCACACTTTGTTTATTCTAGGCAGCACAGAGGATTTCTTTaGAAAATGACAAGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKFIILEAILPHFVYSRQHRGFL*KMTSKL Trigger: AAGCTTGCTTGTCATTTTCAAAAGAAATCCTCTGTG...CTGCCTAGAATAAACAAAGTGTGGAAGTATGGCCTCGAGAATGATGAACTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATACGAAGGTGACCAATTCTATTTTCAGTTCTAAACATAGGAATGTGTCTTCACAATCGTCAAACTaGCTTTCATACCATACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WDTKVTNSIFSSKHRNVSSQSSN*LSYHTS Trigger: GGACGTATGGTATGAAAGCAAGTTTGACGATTGTGA...AGACACATTCCTATGTTTAGAACTGAAAATAGAATTGGTCACCTTCGTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS TCA 72 bp | CGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCTTaGGCACCACGCGCCGGCGGCCGCCCTCGCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAAPARAANPGA*APRAGGRPRGA Trigger: AGCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CAA 72 bp | TCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCTaGAGCACCACGCGCCGGCGGCCGCCCTCGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCASSRCEPRR*STTRRRPPSRG Trigger: GCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | CCGTTGAGACGCGCGAACTCGGTGCGGGGCATGGCCTaGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRRANSVRGMA*SRSQRGRPVAR Trigger: GCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGCCCCGCACCGAGTTCGCGCGTCTCAACGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CAA 90 bp | ATGCTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGGCGCTaGAGCACCACGCGCCGGCGGCCGCCCTCGCGGGGCTCGCCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: MLWSSCASSRCEPRR*STTRRRPPSRGSPY Trigger: GTACGGCGAGCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 72 bp | GGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATaGTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRSAAGRWPACR*SGRAAPARAAN Trigger: GTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | GGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTTaGAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGRSAAGRWPA*RCSGRAAPARA Trigger: AGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS GCA 72 bp | CGCACCAGGCGGTCCAGCAGGCGCTGCGAGGGGCAGTaGACCAGGTCCGACCAACCCTCCACCGCCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTRRSSRRCEGQ*TRSDQPSTASG Trigger: GCCGGAGGCGGTGGAGGGTTGGTCGGACCTGGTGCACTGCCCCTCGCAGCGCCTGCTGGACCGCCTGGTGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | CAGCGCGGCCGGCCGGTGGCCCGCTTGCAGATGCTCTaGTCGAGCTGCGCCAGCTCGCGCTGCGAACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRGRPVARLQML*SSCASSRCEPR Trigger: CCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | TGGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTaGCAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: WSRSQRGRPVAR*QMLWSSCASSR Trigger: GCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | GGCATGGCCTGGAGCAGGTCGCAGCGCGGCCGGCCGGTGGCCCGCTaGCAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCTGCGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GMAWSRSQRGRPVAR*QMLWSSCASSRCEP Trigger: GGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 72 bp | GCATGGCCTGGAGCAGGTCGCAGCGCGGCCGGCCGGTaGCCCGCTTGCAGATGCTCTGGTCGAGCTGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWPGAGRSAAGR*PACRCSGRAAP Trigger: TGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCCATGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | TCCACCGCCTCCGGCGTGAGCAGCCGCACGTCGCCGTaGAGACGCGCGAACTCGGTGCGGGGCATGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: STASGVSSRTSP*RRANSVRGMAW Trigger: CCAGGCCATGCCCCGCACCGAGTTCGCGCGTCTCAACGGCGACGTGCGGCTGCTCACGCCGGAGGCGGTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | TCCAGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCCACCTGGCCGTaGAGGAAACGGCGGCACCAGCTCGTGCCGAAGCACGCCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRRRRPHVSKPTWP*RKRRHQLVPKHAGH Trigger: GTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | GACCAACCCTCCACCGCCTCCGGCGTGAGCAGCCGCACGTCGCCGTaGAGACGCGCGAACTCGGTGCGGGGCATGGCCTGGAGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: DQPSTASGVSSRTSP*RRANSVRGMAWSRS Trigger: CGACCTGCTCCAGGCCATGCCCCGCACCGAGTTCGCGCGTCTCAACGGCGACGTGCGGCTGCTCACGCCGGAGGCGGTGGAGGGTTGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | CGGCCGGTGGCCCGCTTGCAGATGCTCTGGTCGAGCTaGGCCAGCTCGCGCTGCGAACCCAGGCGCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPVARLQMLWSS*ASSRCEPRRLS Trigger: GCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 72 bp | AGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCCACCTaGCCGTTGAGGAAACGGCGGCACCAGCTCGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRRRRPHVSKPT*PLRKRRHQLVP Trigger: CGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS TCA 72 bp | GCAGGCGGCCCCACGTCTCGAAGCCCACCTGGCCGTTaGGGAAACGGCGGCACCAGCTCGTGCCGAAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AGGPTSRSPPGR*GNGGTSSCRST Trigger: CGTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | CAGCACCAACAGGCTGCCGAGCGCCGCCAGCTTCAGTaGACGGGACAGGCGGCCCAGCTTCAGGGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHQQAAERRQLQ*TGQAAQLQGHQ Trigger: CTGGTGCCCCTGAAGCTGGGCCGCCTGTCCCGTGCACTGAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | TTGCAGATGCTCTGGTCGAGCTGCGCCAGCTCGCGCTaGGAACCCAGGCGCTTGAGCACCACGCGCCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQMLWSSCASSR*EPRRLSTTRRR Trigger: CCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | CGCAGGCGGCCCCACGTCTCGAAGCCCACCTGGCCGTaGAGGAAACGGCGGCACCAGCTCGTGCCGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRRPHVSKPTWP*RKRRHQLVPKH Trigger: GTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGCCAGGTGGGCTTCGAGACGTGGGGCCGCCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | GCGACGGCGAGTGCAGCAGCATCAGCACCAACAGGCTaGCGAGCGCCGCCAGCTTCAGTGCACGGGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATASAAASAPTG*RAPPASVHGTG Trigger: GCCTGTCCCGTGCACTGAAGCTGGCGGCGCTCGGCAGCCTGTTGGTGCTGATGCTGCTGCACTCGCCGTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | TCGTTGCGCTGCCAGGAGGCGAGCAGCGACGGCGAGTaGAGCAGCATCAGCACCAACAGGCTGCCGAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRCQEASSDGE*SSISTNRLPSA Trigger: GGCGCTCGGCAGCCTGTTGGTGCTGATGCTGCTGCACTCGCCGTCGCTGCTCGCCTCCTGGCAGCGCAACGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | ACGCGCCGGCGGCCGCCCTCGCGGGGCTCGCCGTACTaGGCGAAGTACACGTTCTTCACGTTGAGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRRRPPSRGSPY*AKYTFFTLRKS Trigger: GGACTTCCTCAACGTGAAGAACGTGTACTTCGCGCAGTACGGCGAGCCCCGCGAGGGCGGCCGCCGGCGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | CCCTCGCGGGGCTCGCCGTACTGCGCGAAGTACACGTTCTTCACGTaGAGGAAGTCCAGCAGGCGCAGGCGGCCCCACGTCTCGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSRGSPYCAKYTFFT*RKSSRRRRPHVSKP Trigger: GGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCGCGCAGTACGGCGAGCCCCGCGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | CAGCTCGTGCCGAAGCACGCCGGGCACTTATTGAGCTaGAGGAAGCGCCGGTCGGCGAGCTCGTTGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLVPKHAGHLLS*RKRRSASSLRC Trigger: GCAGCGCAACGAGCTCGCCGACCGGCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTGCTTCGGCACGAGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS TCA 72 bp | GCTCGCCGTACTGCGCGAAGTACACGTTCTTCACGTTaGGGAAGTCCAGCAGGCGCAGGCGGCCCCACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARRTARSTRSSR*GSPAGAGGPTS Trigger: AGACGTGGGGCCGCCTGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCGCGCAGTACGGCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | GGGTTGAAGGCCAGGGTGAGCAGCAGCTGCATGCGCTCGGAGTCCTaGAGGTTACGCAGCAGGAAACTGCCCGAGTCCTTGGTCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLKARVSSSCMRSES*RLRSRKLPESLVSA Trigger: CGCGGAGACCAAGGACTCGGGCAGTTTCCTGCTGCGTAACCTCAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCTGGCCTTCAACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | GCCAGGGTGAGCAGCAGCTGCATGCGCTCGGAGTCCTaGAGGTTACGCAGCAGGAAACTGCCCGAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ARVSSSCMRSES*RLRSRKLPESL Trigger: CAAGGACTCGGGCAGTTTCCTGCTGCGTAACCTCAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | CGGCCTGGAACCGGCCATAGCGTTTCTTGGGGTTGGTaGACTCATCCAGCAAGGCCTCCAGTCGGCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPGTGHSVSWGW*THPARPPVGHL Trigger: AAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | TTGCGGCCTGGAACCGGCCATAGCGTTTCTTGGGGTTaGTGCACTCATCCAGCAAGGCCTCCAGTCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRPGTGHSVSWG*CTHPARPPVGH Trigger: ATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CAA 90 bp | CAACCTTCATCAGATGGAAAACTCTGTAGCACCAGCGGCTCGGGGTaGAAGGCCAGGGTGAGCAGCAGCTGCATGCGCTCGGAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QPSSDGKLCSTSGSG*KARVSSSCMRSESL Trigger: CAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCTGGCCTTCAACCCCGAGCCGCTGGTGCTACAGAGTTTTCCATCTGATGAAGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CAA 90 bp | ACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTTGGCAATTTCACTaGGTGGATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: THPARPPVGHLWQFH*VDHGGVLQKCRARW Trigger: CCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | GGCCTCCAGTCGGCCATCTTTGGCAATTTCACTTGGTaGATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLQSAIFGNFTW*IMEESSRSAAP Trigger: TGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | GTTCTTTTGCGGCCTGGAACCGGCCATAGCGTTTCTTaGGGTTGGTGCACTCATCCAGCAAGGCCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLLRPGTGHSVS*GWCTHPARPPV Trigger: GACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
||
| CDS CCA 72 bp | AGTCGGCCATCTTTGGCAATTTCACTTGGTGGATCATaGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SRPSLAISLGGS*RSPPEVPRQVA Trigger: TGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | GCAAGGCCTCCAGTCGGCCATCTTTGGCAATTTCACTaGGTGGATCATGGAGGAGTCCTCCAGAAGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ARPPVGHLWQFH*VDHGGVLQKCR Trigger: GCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 72 bp | GATCATGGAGGAGTCCTCCAGAAGTGCCGCGCCAGGTaGCATGTCTGGATAAGAGGTTCTGACAAACGGCAT | + |
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Preference number: 6 (lower is better) Translates to: DHGGVLQKCRAR*HVWIRGSDKRH Trigger: ATGCCGTTTGTCAGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | TTGGGGTTGGTGCACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTaGGCAATTTCACTTGGTGGATCATGGAGGAGTCCTCCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LGLVHSSSKASSRPS*AISLGGSWRSPPEV Trigger: CACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCACCAACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | TTTCACTTGGTGGATCATGGAGGAGTCCTCCAGAAGTaGCGCGCCAGGTGGCATGTCTGGATAAGAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FHLVDHGGVLQK*RARWHVWIRGS Trigger: AGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | GTGCACTCATCCAGCAAGGCCTCCAGTCGGCCATCTTaGGCAATTTCACTTGGTGGATCATGGAGGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VHSSSKASSRPS*AISLGGSWRSP Trigger: AGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGCCTTGCTGGATGAGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | TGTGACTTAACTGTGCCAGATAGCCACGCAGTTCTTTaGCGGCCTGGAACCGGCCATAGCGTTTCTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: CDLTVPDSHAVL*RPGTGHSVSWG Trigger: ACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGCTATCTGGCACAGTTAAGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | ACCTCACATTGTGACTTAACTGTGCCAGATAGCCACGCAGTTCTTTaGCGGCCTGGAACCGGCCATAGCGTTTCTTGGGGTTGGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: TSHCDLTVPDSHAVL*RPGTGHSVSWGWCT Trigger: AGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGCTATCTGGCACAGTTAAGTCACAATGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CCA 72 bp | GGAGTCCTCCAGAAGTGCCGCGCCAGGTGGCATGTCTaGATAAGAGGTTCTGACAAACGGCATAGTAATTGT | + |
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Preference number: 6 (lower is better) Translates to: GVLQKCRARWHV*IRGSDKRHSNC Trigger: ACAATTACTATGCCGTTTGTCAGAACCTCTTATCCAGACATGCCACCTGGCGCGGCACTTCTGGAGGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS TCA 72 bp | TCCCATCTCTTGGACCAACTGCAAAGTTGTCAAAGCTaGCGTCCAGGAGGTAGAGTGCAAATTCAAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SHLLDQLQSCQS*RPGGRVQIQSH Trigger: ATGACTTTGAATTTGCACTCTACCTCCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCCAAGAGATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | TCATTGTTTGTAAGCTGCTCTGCTATCTCCATTAACTaGCAAGCAAGGTCAACTCTCTTCTCCCATGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLFVSCSAISIN*QARSTLFSHGA Trigger: TGCACCATGGGAGAAGAGAGTTGACCTTGCTTGGCAGTTAATGGAGATAGCAGAGCAGCTTACAAACAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | ATCCACAATGATTACTTTCCCATCTCTTGGACCAACTaGAAAGTTGTCAAAGCTGACGTCCAGGAGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: IHNDYFPISWTN*KVVKADVQEVE Trigger: CTCTACCTCCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCCAAGAGATGGGAAAGTAATCATTGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS TCA 72 bp | GGTTCTGACAAACGGCATAGTAATTGTGGTCCACAGTaGCACGAGCACAGAGGATTTCTTTTGAAAATGACA | + |
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Preference number: 6 (lower is better) Translates to: GSDKRHSNCGPQ*HEHRGFLLKMT Trigger: TGTCATTTTCAAAAGAAATCCTCTGTGCTCGTGTCACTGTGGACCACAATTACTATGCCGTTTGTCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS GCA 72 bp | ATGACAAGCAAGCTTCCTTGTCACAATCGTCAAACTTaGTTTCATACCATACGTCCCAATTCTCAGGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: MTSKLPCHNRQT*FHTIRPNSQAY Trigger: ATAAGCCTGAGAATTGGGACGTATGGTATGAAAGCAAGTTTGACGATTGTGACAAGGAAGCTTGCTTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | AATGACAAGCAAGCTTCCTTGTCACAATCGTCAAACTaGCTTTCATACCATACGTCCCAATTCTCAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: NDKQASLSQSSN*LSYHTSQFSGL Trigger: TAAGCCTGAGAATTGGGACGTATGGTATGAAAGCAAGTTTGACGATTGTGACAAGGAAGCTTGCTTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | CAACATAATTTACAGCCACCATTCTTCCACAAGCTCCAAGATATTTaGCAAATGGCCAACCTTCATCAGATGGAAAACTCTGTAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: QHNLQPPFFHKLQDI*QMANLHQMENSVAP Trigger: TGGTGCTACAGAGTTTTCCATCTGATGAAGGTTGGCCATTTGCAAAATATCTTGGAGCTTGTGGAAGAATGGTGGCTGTAAATTATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 90 bp | ACACGAGCACAGAGGATTTCTTTTGAAAATGACAAGCAAGCTTCCTaGTCACAATCGTCAAACTTGCTTTCATACCATACGTCCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: TRAQRISFENDKQAS*SQSSNLLSYHTSQF Trigger: GAATTGGGACGTATGGTATGAAAGCAAGTTTGACGATTGTGACAAGGAAGCTTGCTTGTCATTTTCAAAAGAAATCCTCTGTGCTCGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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| CDS CAA 72 bp | CAGAGGATTTCTTTTGAAAATGACAAGCAAGCTTCCTaGTCACAATCGTCAAACTTGCTTTCATACCATACG | + |
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Preference number: 6 (lower is better) Translates to: QRISFENDKQAS*SQSSNLLSYHT Trigger: CGTATGGTATGAAAGCAAGTTTGACGATTGTGACAAGGAAGCTTGCTTGTCATTTTCAAAAGAAATCCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113028.2 |
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