Pregenerated sensors for DIPK1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047992Ensembl transcript IDs: ENSMUST00000052501.8, ENSMUST00000159800.8, ENSMUST00000161429.3, ENSMUST00000235504.2, ENSMUST00000237435.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGGGGCTATGCTGTTGTTGGGCAGCTCCAAGCCTAGCGTGTTCTTaGCCTCCCCGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: AGLCCCWAAPSLACS*PPRPPSGAAQPQGC Trigger: GCATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCATAGCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR GCA 90 bp | GGGTTCCAGACTGGCAACTCTGGTGAAACTCCTCCCTTCGGTCACTaGGGAAGGAGTGACAGACCGGAGGTCGCCACGAAACCAGATCGA | + |
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Preference number: 1 (lower is better) Translates to: GFQTGNSGETPPFGH*GRSDRPEVATKPDR Trigger: TCGATCTGGTTTCGTGGCGACCTCCGGTCTGTCACTCCTTCCGCAGTGACCGAAGGGAGGAGTTTCACCAGAGTTGCCAGTCTGGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR GCA 90 bp | GCACAGATTCACAGGCACGATGACTGGGTCATGGGCATGCGAATGTaGACACACACACACACACACACACACACACACACACTTGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: AQIHRHDDWVMGMRM*THTHTHTHTHTLAC Trigger: GCACGCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATTCGCATGCCCATGACCCAGTCATCGTGCCTGTGAATCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR GCA 90 bp | CAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATaGATGCACTTCTGGGTGGATTCACATGGATTCATCCATGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: QAPSAHPLTHFWMYT*MHFWVDSHGFIHEH Trigger: GTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR GCA 90 bp | CTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATaGACTTCTGGGTGGATTCACATGGATTCATCCATGAGCACAGAT | + |
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Preference number: 1 (lower is better) Translates to: LRVPTHLLTSGCTHA*TSGWIHMDSSMSTD Trigger: ATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR CCA 90 bp | GCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTaGGTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: AHPLTHFWMYTCMHF*VDSHGFIHEHRFTG Trigger: GCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR GCA 90 bp | CAGATGACTTGCAGGTTGCTGTTGACACGCTGGGCTCCACACTTGTaGACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTGCAA | + |
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Preference number: 1 (lower is better) Translates to: QMTCRLLLTRWAPHL*TRRSHLEKQSKKLQ Trigger: TTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR CCA 90 bp | ACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTaGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGA | + |
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Preference number: 1 (lower is better) Translates to: THLLTSGCTHACTSG*IHMDSSMSTDSQAR Trigger: TCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR GCA 90 bp | ACTTGTGCACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTaGAATCTTCATCTCCCGTGCAGTTCTGCTCAAGGATTTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TCALGDHTWRNNRRN*NLHLPCSSAQGFPS Trigger: TGAGGGAAATCCTTGAGCAGAACTGCACGGGAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATGCCGGGGGCACCTGCCCCTGCCTCCTCCAGCAGAGTaGGGGGCGGGAAGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RPPSGAAQPQGCRGHLPLPPPAE*GAGSWR Trigger: TCTCCAGCTTCCCGCCCCTCACTCTGCTGGAGGAGG...CAGGGGCAGGTGCCCCCGGCATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGTTGTTGGGCAGCTCCAAGCCTAGCGTGTTCTTGACCTCCCCGGCCACCGCTCAGCCTCAGGGATaGCGGGGGCACCTGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: MLLLGSSKPSVFLTSPATAQPQG*RGHLPL Trigger: CAGGGGCAGGTGCCCCCGGCATCCCTGAGGCTGAGC...GGTGGCCGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR CAA 90 bp | AGCGGGGCTATGCTGTTGTTGGGCAGCTCCAAGCCTAGCGTGTTCTaGACCTCCCCGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: SGAMLLLGSSKPSVF*TSPATIRSSSASGM Trigger: CATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCATAGCCCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGGAAGCTGGAGAAGGCCTCCCTCTTGGATTTGAGGACAACGGTCCGGCCTCTGATCTCCATATGTaGTCTGTAGCATGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: GREAGEGLPLGFEDNGPASDLHM*SVACHT Trigger: GGTGTGGCATGCTACAGAGCACATATGGAGATCAGA...GGCCGGACCGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTCCAGCTTCCCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCACCTCCCTTCGGTCACTaGGGAAGGAGTGACAGACCG | + |
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Preference number: 2 (lower is better) Translates to: TGSECPPTYSLLDVHMHAPPFGH*GRSDRP Trigger: CGGTCTGTCACTCCTTCCGCAGTGACCGAAGGGAGG...TGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTCCTCCCTTCGGTCACTaGGGAAGGAGTGACAGACCG | + |
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Preference number: 2 (lower is better) Translates to: GKIPRDTLKSHLSIQAPSPPFGH*GRSDRP Trigger: CGGTCTGTCACTCCTTCCGCAGTGACCGAAGGGAGG...ACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCTCACTGCGGAAGGAGTaGCAGACCGGAGGTCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PPTYSLLDVHMHALLGGFSLRKE*QTGGRH Trigger: GTGGCGACCTCCGGTCTGTCACTCCTTCCGCAGTGA...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCTGGAGAAGGCCTCCCTCTTGGATTTGAGGACAACGGTCCGGCCACGCCTTCTATTTCAAGCTTaGCACAGTGATTTACACCAC | + |
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Preference number: 2 (lower is better) Translates to: GKLEKASLLDLRTTVRPRLLFQA*HSDLHH Trigger: GTGGTGTAAATCACTGTGCCAAGCTTGAAATAGAAG...GCGTGGCCGGACCGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTCCAGCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGAGCAGCAGCCTCTTGTCTATAGTGGCAAGGTCTGTGTACAGTCCTCAGACTGGCAACTCTGGTaGAACTCCTCCCTTCGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KEEQQPLVYSGKVCVQSSDWQLW*NSSLRS Trigger: TGACCGAAGGGAGGAGTTTCACCAGAGTTGCCAGTC...TGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGCTGCTGCTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGGAAGGGGAGCTCAGCTaGACACTTCAGAAGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: IQAPSAHPLTHFWMYTCMEGELS*TLQKSM Trigger: CATGCTCTTCTGAAGTGTGCAGCTGAGCTCCCCTTC...CATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGCACTTCTGGGTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGCAGATCGAACCGAGCTaGGCAGGAGCAAGAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: ACTSGWIHMDSSMSTDSQQIEPS*AGAREV Trigger: GACCTCTCTTGCTCCTGCCCAGCTCGGTTCGATCTG...CTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCTCCTCTGTCTACTCTTaGTGGCAAAGGCAAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KIPRDTLKSHLSIQAPSASSVYS*WQRQER Trigger: TCTCTCTTGCCTTTGCCATCAAGAGTAGACAGAGGA...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCAACACACACACACACTTaGGTGCACAGGAACACTCAT | + |
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Preference number: 2 (lower is better) Translates to: TGSECPPTYSLLDVHMHATHTHT*VHRNTH Trigger: ATGAGTGTTCCTGTGCACGCAAGTGTGTGTGTGTGT...TGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR CAA 90 bp | CTGTTGACACGCTGGGCTCCACACTTGTGCACTCGGAGATCACACTaGGAGAAACAATCGAAGAAATTGCAATCTTCATCTCCCGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLTRWAPHLCTRRSH*EKQSKKLQSSSPVQ Trigger: CTGCACGGGAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR CAA 90 bp | GAGGAGAACCAGTGTCGGAATATTTTATCACAGATGACTTGCAGGTaGCTGTTGACACGCTGGGCTCCACACTTGTGCACTCGGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: EENQCRNILSQMTCR*LLTRWAPHLCTRRS Trigger: TGATCTCCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCGACACTGGTTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGTCACTGCGGAAGGAGTaGCAGACCGGAGGTCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KANCAAKDTHFIAFNSRGSLRKE*QTGGRH Trigger: GTGGCGACCTCCGGTCTGTCACTCCTTCCGCAGTGA...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR CAA 90 bp | AACCAGTGTCGGAATATTTTATCACAGATGACTTGCAGGTTGCTGTaGACACGCTGGGCTCCACACTTGTGCACTCGGAGATCACACTTG | + |
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Preference number: 2 (lower is better) Translates to: NQCRNILSQMTCRLL*TRWAPHLCTRRSHL Trigger: CAAGTGTGATCTCCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCGACACTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGAGCAGCAGCCTCTTGTCTATAGTGGCAAGGTCTGTGTACAGTCCTCATCCTCTGTCTACTCTTaGTGGCAAAGGCAAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KEEQQPLVYSGKVCVQSSSSVYS*WQRQER Trigger: TCTCTCTTGCCTTTGCCATCAAGAGTAGACAGAGGA...TGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGCTGCTGCTCTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGACATATCCATCAGTATaGCCACAGCCACGCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGTYPSV*PQPRFS Trigger: GCTAAAGCGTGGCTGTGGGCATACTGATGGATATGT...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR CAA 90 bp | CACTTGTGCACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATaGCAATCTTCATCTCCCGTGCAGTTCTGCTCAAGGATTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HLCTRRSHLEKQSKK*QSSSPVQFCSRISL Trigger: GAGGGAAATCCTTGAGCAGAACTGCACGGGAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCCACCCACTTACTCACTTCAATTATGAGAACATGTaGAATCCCACTTACATACAC | + |
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Preference number: 2 (lower is better) Translates to: LKSHLSIQAPSAHPLTHFNYENM*NPTYIH Trigger: GTGTATGTAAGTGGGATTGCACATGTTCTCATAATT...GAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACACAGATCGAACCGAGCTaGGCAGGAGCAAGAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HSYIQTHSYTHGCNIMHTQIEPS*AGAREV Trigger: GACCTCTCTTGCTCCTGCCCAGCTCGGTTCGATCTG...TGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | ATTATGCACACAATTATTTGCAAACATATCCATCAGTATGCCCACAGCCACGCTGAAGGGGAGCTCAGCTaGACACTTCAGAAGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: IMHTIICKHIHQYAHSHAEGELS*TLQKSM Trigger: CATGCTCTTCTGAAGTGTGCAGCTGAGCTCCCCTTC...AGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTGCAATCTTCATCTCTCTGATCTCCATATGTaGTCTGTAGCATGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: ALGDHTWRNNRRNCNLHLSDLHM*SVACHT Trigger: GGTGTGGCATGCTACAGAGCACATATGGAGATCAGA...GAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGCACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTGCAATCTTCTCTCCCGTGCAGTTCTaGTCAAGGATTTCCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: LVHSEITLGETIEEIAIFSPVQF*SRISLI Trigger: AATGAGGGAAATCCTTGAGCAGAACTGCACGGGAGA...GAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR CAA 90 bp | AACCCACTCATACACTCATGGGTGCAACATTATGCACACAATTATTaGCAAACATATCCATCAGTATGCCCACAGCCACGCTTTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NPLIHSWVQHYAHNY*QTYPSVCPQPRFSL Trigger: CAAGCTAAAGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCATGGGTGCAACATTATaGACACAATTATTTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PPTYSLLDVHMHALLGGFMGATL*TQLFAN Trigger: GTTTGCAAATAATTGTGTGCATAATGTTGCACCCAT...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGATGGGTGCAACATTATaGACACAATTATTTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGMGATL*TQLFAN Trigger: GTTTGCAAATAATTGTGTGCATAATGTTGCACCCAT...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGACACACACACACACTTaGGTGCACAGGAACACTCAT | + |
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Preference number: 2 (lower is better) Translates to: KANCAAKDTHFIAFNSRGTHTHT*VHRNTH Trigger: ATGAGTGTTCCTGTGCACGCAAGTGTGTGTGTGTGT...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGCCACTCATACACTCATaGGTGCAACATTATGCACAC | + |
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Preference number: 2 (lower is better) Translates to: KANCAAKDTHFIAFNSRGPLIHS*VQHYAH Trigger: GTGTGCATAATGTTGCACCCATGAGTGTATGAGTGG...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTGCAATCTTCATCTCCCCTTCTATTTCAAGCTTaGCACAGTGATTTACACCAC | + |
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Preference number: 2 (lower is better) Translates to: TRRSHLEKQSKKLQSSSPLLFQA*HSDLHH Trigger: GTGGTGTAAATCACTGTGCCAAGCTTGAAATAGAAG...GGGAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
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| 3UTR TCA 72 bp | CCCCGCCCACACACAGGTCCTCGCACAGGGCGCCCGTaGGCCAGCCACGGCGATAGTCCTGGCACTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PRPHTGPRTGRP*ASHGDSPGTVF Trigger: GAAAACAGTGCCAGGACTATCGCCGTGGCTGGCTCACGGGCGCCCTGTGCGAGGACCTGTGTGTGGGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCCGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATGCCGGGGGCACCTGGAGAAGGCCTCCCTCTaGGATTTGAGGACAACGGTC | + |
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Preference number: 3 (lower is better) Translates to: PPRPPSGAAQPQGCRGHLEKASL*DLRTTV Trigger: GACCGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTC...CAGGTGCCCCCGGCATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCGGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR TCA 72 bp | GGGGCGGGAAGCTGGAGAAGGCCTCCCTCTTGGATTTaGGGACAACGGTCCGGCCACGCCACTGAGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GAGSWRRPPSWI*GQRSGHATEPA Trigger: TGCAGGCTCAGTGGCGTGGCCGGACCGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTCCAGCTTCCCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR TCA 72 bp | TGCTGTTGTTGGGCAGCTCCAAGCCTAGCGTGTTCTTaGCCTCCCCGGCCACCATCAGGAGCAGCTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: CCCWAAPSLACS*PPRPPSGAAQP Trigger: AGGCTGAGCTGCTCCTGATGGTGGCCGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
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| 3UTR GCA 72 bp | ACTGGCAACTCTGGTGAAACTCCTCCCTTCGGTCACTaGGGAAGGAGTGACAGACCGGAGGTCGCCACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGNSGETPPFGH*GRSDRPEVATK Trigger: TTTCGTGGCGACCTCCGGTCTGTCACTCCTTCCGCAGTGACCGAAGGGAGGAGTTTCACCAGAGTTGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | CACAGGCACGATGACTGGGTCATGGGCATGCGAATGTaGACACACACACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: HRHDDWVMGMRM*THTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATTCGCATGCCCATGACCCAGTCATCGTGCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | CACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTaGCCACCCACTTACTCACTTCTGGATGTACACATG | + |
|
Preference number: 3 (lower is better) Translates to: HTEKPPLHTGSE*PPTYSLLDVHM Trigger: CATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR TCA 72 bp | ATGGATTCATCCATGAGCACAGATTCACAGGCACGATaGCTGGGTCATGGGCATGCGAATGTGCACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: MDSSMSTDSQAR*LGHGHANVHTH Trigger: GTGTGTGTGCACATTCGCATGCCCATGACCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR TCA 72 bp | CATGCACTTCTGGGTGGATTCACATGGATTCATCCATaGGCACAGATTCACAGGCACGATGACTGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: HALLGGFTWIHP*AQIHRHDDWVM Trigger: CATGACCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGAGCAGCAGCCTCTTGTCTATAGTGGCAAGGTCTGTGTACAGTCCTCATTCCTCTGTCTACTCTaGATGGCAAAGGCAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KEEQQPLVYSGKVCVQSSFLCLL*MAKARE Trigger: CTCTCTTGCCTTTGCCATCAAGAGTAGACAGAGGAA...TGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGCTGCTGCTCTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | CCCACCCACTTACTCACTTCTGGATGTACACATGCATaGACTTCTGGGTGGATTCACATGGATTCATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PTHLLTSGCTHA*TSGWIHMDSSM Trigger: CATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | AGTGCCCACCCACTTACTCACTTCTGGATGTACACATaGATGCACTTCTGGGTGGATTCACATGGATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SAHPLTHFWMYT*MHFWVDSHGFI Trigger: GATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | GAGAACCAGTGTCGGAATATTTTATCACAGATGACTTaGAGGTTGCTGTTGACACGCTGGGCTCCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: ENQCRNILSQMT*RLLLTRWAPHL Trigger: CAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCGACACTGGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| 3UTR CCA 72 bp | CTTACTCACTTCTGGATGTACACATGCATGCACTTCTaGGTGGATTCACATGGATTCATCCATGAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTHFWMYTCMHF*VDSHGFIHEHR Trigger: TCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGTTCCTCTGTCTACTCTaGATGGCAAAGGCAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KANCAAKDTHFIAFNSRGFLCLL*MAKARE Trigger: CTCTCTTGCCTTTGCCATCAAGAGTAGACAGAGGAA...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | TACACTCATGGGTGCAACATTATGCACACAATTATTTaGAAACATATCCATCAGTATGCCCACAGCCACGCT | + |
|
Preference number: 3 (lower is better) Translates to: YTHGCNIMHTII*KHIHQYAHSHA Trigger: AGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAATGTTGCACCCATGAGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR GCA 72 bp | AGGTTGCACTCTGATCTCCATATGTGCTCTGTAGCATaGCACACCAGTCTAAAATCTTCTATTTCAAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RLHSDLHMCSVA*HTSLKSSISSL Trigger: CAAGCTTGAAATAGAAGATTTTAGACTGGTGTGGCATGCTACAGAGCACATATGGAGATCAGAGTGCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159800.8 ENSMUST00000237435.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATGCCGGGGGCACCTGCCGAGCAGCAGCGCAGCTaGCAGCACCCAGCCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPATIRSSSASGMPGAPAEQQRS*QHPAGG Trigger: ACCGCCGGCTGGGTGCTGGCAGCTGCGCTGCTGCTC...GGCAGGTGCCCCCGGCATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCGGGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
||
| CDS-3UTR GCA 90 bp | CGGCCACCATCAGGAGCAGCTCAGCCTCAGGGATGCCGGGGGCACCTGCCCCTGGGCTCTTCTCATCCGTaGAGCGCTCGGAGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPSGAAQPQGCRGHLPLGSSHP*SARRGR Trigger: GCGTCCTCTCCGAGCGCTGCACGGATGAGAAGAGCC...CAGGGGCAGGTGCCCCCGGCATCCCTGAGGCTGAGCTGCTCCTGATGGTGGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
||
| 3UTR CAA 72 bp | GGGCCCTGCCTGGCAGGCCATAGCGGGGCTATGCTGTaGTTGGGCAGCTCCAAGCCTAGCGTGTTCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GPCLAGHSGAML*LGSSKPSVFLT Trigger: GGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCATAGCCCCGCTATGGCCTGCCAGGCAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGCTGGAGAAGGCCTCCCTCTTGGATTTGAGGACAACGGTCCGGCCACGCACAGCGCAGCCAGGATaGGCCGGCTCTTCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKLEKASLLDLRTTVRPRTAQPG*AGSSHP Trigger: CGGATGAGAAGAGCCGGCGCATCCTGGCTGCGCTGT...GCGTGGCCGGACCGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTCCAGCTTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCGCACTGGCCAGCTGTTaGCGCCAGCCAGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSAALASC*RQPGPC Trigger: GCAGGGCCCTGGCTGGCGGCAACAGCTGGCCAGTGC...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR CAA 72 bp | ATGCTGTTGTTGGGCAGCTCCAAGCCTAGCGTGTTCTaGACCTCCCCGGCCACCATCAGGAGCAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGSSKPSVF*TSPATIRSSSA Trigger: GGCTGAGCTGCTCCTGATGGTGGCCGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237435.2 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGGCACTGGCCAGCTGTTaGCGCCAGCCAGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGALASC*RQPGPC Trigger: GCAGGGCCCTGGCTGGCGGCAACAGCTGGCCAGTGC...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | ATACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGAGCCAGGGCCCTGCCTaGCAGGCCATAGCGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IQAPSAHPLTHFWMYTCMSQGPA*QAIAGL Trigger: TAGCCCCGCTATGGCCTGCCAGGCAGGGCCCTGGCT...CATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCCGGGCTCCTGTGTGTTaGGGAGAACCAGTGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSARAPVC*GEPVSE Trigger: TTCCGACACTGGTTCTCCTCAACACACAGGAGCCCG...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCCCAGAACACACTGGATaGGGCTGTCCAGGAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSAPEHTG*GCPGIP Trigger: GGGAATTCCTGGACAGCCTCATCCAGTGTGTTCTGG...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR TCA 90 bp | ATACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCCAGAACACACTGGATaGGGCTGTCCAGGAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQAPSAHPLTHFWMYTCMPEHTG*GCPGIP Trigger: GGGAATTCCTGGACAGCCTCATCCAGTGTGTTCTGG...CATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR CAA 72 bp | CTTCAGAAGAGCATGCCACGGGCTCTGACAGCTCATTaGCATAGCAACTACAGGAGGAGTCCCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQKSMPRALTAH*HSNYRRSPLKV Trigger: GACCTTCAAGGGACTCCTCCTGTAGTTGCTATGCAAATGAGCTGTCAGAGCCCGTGGCATGCTCTTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAAACAATCGAAGAAATTGCAATCTTCATCTCCCGTGCAGTTCTGCTCGGCTCTTCTCATCCGTaGAGCGCTCGGAGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LGETIEEIAIFISRAVLLGSSHP*SARRGR Trigger: GCGTCCTCTCCGAGCGCTGCACGGATGAGAAGAGCC...GAGCAGAACTGCACGGGAGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| CDS-3UTR CCA 90 bp | ATTATGCACACAATTATTTGCAAACATATCCATCAGTATGCCCACAGCCACGCTAGCCAGGGCCCTGCCTaGCAGGCCATAGCGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IMHTIICKHIHQYAHSHASQGPA*QAIAGL Trigger: TAGCCCCGCTATGGCCTGCCAGGCAGGGCCCTGGCT...AGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCAGCTTCCAGAACACACTaGATGAGGCTGTCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSECPPTYSLLDVHMHAASRTH*MRLSRN Trigger: ATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGC...TGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCTCTCCCGTGCAGTTCTaGTCAAGGATTTCCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSASPVQF*SRISLI Trigger: AATGAGGGAAATCCTTGAGCAGAACTGCACGGGAGA...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGTGCACTCGGAGATCACACTTGGAGAAACAATCGAAGAAATTGCAATCTACAGCGCAGCCAGGATaGGCCGGCTCTTCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLCTRRSHLEKQSKKLQSTAQPG*AGSSHP Trigger: CGGATGAGAAGAGCCGGCGCATCCTGGCTGCGCTGT...AGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGGTGGCGGCTCAGATCTaGAAGCAGGCTGAAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGVAAQI*KQAEVY Trigger: GTATACTTCAGCCTGCTTCCAGATCTGAGCCGCCAC...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGCAGAGGTGGAGCCGGTaGGAAAAGTCACTGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGQRWSR*EKSLSK Trigger: TTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTG...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCCAGAGGTGGAGCCGGTaGGAAAAGTCACTGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPTYSLLDVHMHALLGGFQRWSR*EKSLSK Trigger: TTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTG...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGCACACAATTATTTGCAAACATATCCATCAGTATGCCCACAGCCACGCTAGCTGCAGCCGAAGCTaGAGGGAGACAGCCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMHTIICKHIHQYAHSHASCSRS*RETAGL Trigger: GAGCCCGGCTGTCTCCCTCCAGCTTCGGCTGCAGCT...AGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTTTATCACAGATGACTTaGAGGTTGCTGTTGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: GKIPRDTLKSHLSIQAPSLSQMT*RLLLTR Trigger: GCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAA...ACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGACGGCCTGCTGTAGCTaGAGCCGAAGCTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KANCAAKDTHFIAFNSRGTACCS*SRSWRE Trigger: CTCCCTCCAGCTTCGGCTGCAGCTACAGCAGGCCGT...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR CAA 72 bp | CGGAATATTTTATCACAGATGACTTGCAGGTTGCTGTaGACACGCTGGGCTCCACACTTGTGCACTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNILSQMTCRLL*TRWAPHLCTRR Trigger: TCTCCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| CDS-3UTR GCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCAATCTTCATCTCCCGTaGAGTTCTGCTCAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSANLHLP*SSAQGF Trigger: AAATCCTTGAGCAGAACTGCACGGGAGATGAAGATT...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | CATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACAACGGCCTGCTGTAGCTaGAGCCGAAGCTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSYIQTHSYTHGCNIMHTTACCS*SRSWRE Trigger: CTCCCTCCAGCTTCGGCTGCAGCTACAGCAGGCCGT...TGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR CAA 72 bp | GGAGAACCAGTGTCGGAATATTTTATCACAGATGACTaGCAGGTTGCTGTTGACACGCTGGGCTCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEPVSEYFITDD*QVAVDTLGSTL Trigger: AAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCGACACTGGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| CDS-3UTR GCA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCAACAATCGAAGAAATTaGAATCTTCATCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPRDTLKSHLSIQAPSANNRRN*NLHLPC Trigger: GCACGGGAGATGAAGATTGCAATTTCTTCGATTGTT...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | GCATGCACTTCTGGGTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGAAGTCACTGTCGAAATaGCTCACCATGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACTSGWIHMDSSMSTDSQKSLSK*LTMSRK Trigger: CTTCCTGGACATGGTGAGCCATTTCGACAGTGACTT...CTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR TCA 90 bp | CACATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACGGGCTCCTGTGTGTTaGGGAGAACCAGTGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HIHIYKPTHTLMGATLCTRAPVC*GEPVSE Trigger: TTCCGACACTGGTTCTCCTCAACACACAGGAGCCCG...TGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGGCCAGCATCATCCAGTaGGAAGAGAGCCTTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KANCAAKDTHFIAFNSRGASIIQ*EESLVV Trigger: CACCACAAGGCTCTCTTCCCACTGGATGATGCTGGC...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | ATACAGGCTCCGAGTGCCCACCCACTTACTCACTTCTGGATGTACACATGCATGCTCGGAGATCACACTTaGAGAAACAATCGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQAPSAHPLTHFWMYTCMLGDHT*RNNRRN Trigger: ATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAG...CATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGGGCACTCGGAGCCTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| 3UTR CAA 72 bp | CGCTGGGCTCCACACTTGTGCACTCGGAGATCACACTaGGAGAAACAATCGAAGAAATTGCAATCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RWAPHLCTRRSH*EKQSKKLQSSS Trigger: AGATGAAGATTGCAATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGTGCACAAGTGTGGAGCCCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159800.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGAACAATCGAAGAAATTaGAATCTTCATCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGNNRRN*NLHLPC Trigger: GCACGGGAGATGAAGATTGCAATTTCTTCGATTGTT...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGCTAATAGCCTGTGCTTaGCCAGCATCATCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KANCAAKDTHFIAFNSRGLIACA*PASSSG Trigger: CCCACTGGATGATGCTGGCCAAGCACAGGCTATTAG...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | CACATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACAGTGGCGGCTCAGATCTaGAAGCAGGCTGAAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: HIHIYKPTHTLMGATLCTVAAQI*KQAEVY Trigger: GTATACTTCAGCCTGCTTCCAGATCTGAGCCGCCAC...TGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | CATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACACTAATAGCCTGTGCTTaGCCAGCATCATCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSYIQTHSYTHGCNIMHTLIACA*PASSSG Trigger: CCCACTGGATGATGCTGGCCAAGCACAGGCTATTAG...TGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGTTGACATCACAGAGGTaGAGCCGGTGGGAAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KANCAAKDTHFIAFNSRGLTSQR*SRWEKS Trigger: TGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAA...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGGCTTCCAGAACACACTaGATGAGGCTGTCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KANCAAKDTHFIAFNSRGASRTH*MRLSRN Trigger: ATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGC...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | CACATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACAAAGTCACTGTCGAAATaGCTCACCATGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIHIYKPTHTLMGATLCTKSLSK*LTMSRK Trigger: CTTCCTGGACATGGTGAGCCATTTCGACAGTGACTT...TGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGCACACAATTATTTGCAAACATATCCATCAGTATGCCCACAGCCACGCTAATCTTCATCTCCCGTaGAGTTCTGCTCAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IMHTIICKHIHQYAHSHANLHLP*SSAQGF Trigger: AAATCCTTGAGCAGAACTGCACGGGAGATGAAGATT...AGCGTGGCTGTGGGCATACTGATGGATATGTTTGCAAATAATTGTGTGCATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR GCA 90 bp | CACATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACATTATCACAGATGACTTaGAGGTTGCTGTTGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: HIHIYKPTHTLMGATLCTLSQMT*RLLLTR Trigger: GCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAA...TGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CCA 90 bp | CATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACACTCGGAGATCACACTTaGAGAAACAATCGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSYIQTHSYTHGCNIMHTLGDHT*RNNRRN Trigger: ATTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAG...TGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS TCA 90 bp | ACACTGGATGAGGCTGTCCAGGAATTCCCCGAGGAGCCCCCGTGCTaGGCACACTCCTGCACGGCCTGCTGTAGCTGCAGCCGAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLDEAVQEFPEEPPC*AHSCTACCSCSRSW Trigger: CCAGCTTCGGCTGCAGCTACAGCAGGCCGTGCAGGAGTGTGCTCAGCACGGGGGCTCCTCGGGGAATTCCTGGACAGCCTCATCCAGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS TCA 90 bp | ATCTGGAAGCAGGCTGAAGTATACGTATTCCTCCTGTTGGAGCAGTaGCCACGCACTGGCCAGCTGTTGCCGCCAGCCAGGGCCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IWKQAEVYVFLLLEQ*PRTGQLLPPARALP Trigger: AGGCAGGGCCCTGGCTGGCGGCAACAGCTGGCCAGTGCGTGGTCACTGCTCCAACAGGAGGAATACGTATACTTCAGCCTGCTTCCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS TCA 90 bp | CAGAGTGGCCTGCAAGAGCCATCGAAGCTTCCAGAACACACTGGATaGGGCTGTCCAGGAATTCCCCGAGGAGCCCCCGTGCTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QSGLQEPSKLPEHTG*GCPGIPRGAPVLST Trigger: TGTGCTCAGCACGGGGGCTCCTCGGGGAATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGCTTCGATGGCTCTTGCAGGCCACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | CGGCTCAGATCTGGAAGCAGGCTGAAGTATACGTATTCCTCCTGTTaGAGCAGTGACCACGCACTGGCCAGCTGTTGCCGCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRSGSRLKYTYSSC*SSDHALASCCRQPG Trigger: CCCTGGCTGGCGGCAACAGCTGGCCAGTGCGTGGTCACTGCTCCAACAGGAGGAATACGTATACTTCAGCCTGCTTCCAGATCTGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCCGCACTGGCCAGCTGTaGCCGCCAGCCAGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPTYSLLDVHMHALLGGFRTGQL*PPARAL Trigger: CAGGGCCCTGGCTGGCGGCAACAGCTGGCCAGTGCG...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | CTTTCAGAGTGGCCTGCAAGAGCCATCGAAGCTTCCAGAACACACTaGATGAGGCTGTCCAGGAATTCCCCGAGGAGCCCCCGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSEWPARAIEASRTH*MRLSRNSPRSPRAE Trigger: CTCAGCACGGGGGCTCCTCGGGGAATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGCTTCGATGGCTCTTGCAGGCCACTCTGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS GCA 90 bp | GCTCACCATGTCCAGGAAGCTGAGGGCAATGTGGCTAATAGCCTGTaGTTGGCCAGCATCATCCAGTGGGAAGAGAGCCTTGTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHHVQEAEGNVANSL*LASIIQWEESLVVR Trigger: CCTCACCACAAGGCTCTCTTCCCACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCACATTGCCCTCAGCTTCCTGGACATGGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGGGGCTATGCTGTTGTaGGGCAGCTCCAAGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKIPRDTLKSHLSIQAPSGAMLL*GSSKPS Trigger: GCTAGGCTTGGAGCTGCCCAACAACAGCATAGCCCC...ACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGCAGCAGCCTCTTGTCTATAGTGGCAAGGTCTGTGTACAGTCCTCAGGGGCTATGCTGTTGTaGGGCAGCTCCAAGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEEQQPLVYSGKVCVQSSGAMLL*GSSKPS Trigger: GCTAGGCTTGGAGCTGCCCAACAACAGCATAGCCCC...TGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGCTGCTGCTCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCAGCGGGGCTATGCTGTaGTTGGGCAGCTCCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPTYSLLDVHMHALLGGFSGAML*LGSSKP Trigger: AGGCTTGGAGCTGCCCAACAACAGCATAGCCCCGCT...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCTAATAGCCTGTGCTaGGCCAGCATCATCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKIPRDTLKSHLSIQAPSANSLC*ASIIQW Trigger: CCACTGGATGATGCTGGCCAAGCACAGGCTATTAGC...ACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTCAGATGACTTGCAGGTaGCTGTTGACACGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKIPRDTLKSHLSIQAPSQMTCR*LLTRWA Trigger: AGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTG...ACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | TCACTGTCGAAATGGCTCACCATGTCCAGGAAGCTGAGGGCAATGTaGCTAATAGCCTGTGCTTGGCCAGCATCATCCAGTGGGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKWLTMSRKLRAM*LIACAWPASSSGKR Trigger: TCTCTTCCCACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCACATTGCCCTCAGCTTCCTGGACATGGTGAGCCATTTCGACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | TTGACATCACAGAGGTGGAGCCGGTGGGAAAAGTCACTGTCGAAATaGCTCACCATGTCCAGGAAGCTGAGGGCAATGTGGCTAATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSQRWSRWEKSLSK*LTMSRKLRAMWLIA Trigger: GGCTATTAGCCACATTGCCCTCAGCTTCCTGGACATGGTGAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | TTGATGGCGAAGTTCTCAGGTTTGACATCACAGAGGTGGAGCCGGTaGGAAAAGTCACTGTCGAAATGGCTCACCATGTCCAGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMAKFSGLTSQRWSR*EKSLSKWLTMSRKL Trigger: CAGCTTCCTGGACATGGTGAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTTCGCCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 90 bp | AAGTCCCTCTTGATGGCGAAGTTCTCAGGTTTGACATCACAGAGGTaGAGCCGGTGGGAAAAGTCACTGTCGAAATGGCTCACCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLMAKFSGLTSQR*SRWEKSLSKWLTMS Trigger: GGACATGGTGAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTTCGCCATCAAGAGGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | GCATGCACTTCTGGGTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGCAGATGACTTGCAGGTaGCTGTTGACACGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACTSGWIHMDSSMSTDSQQMTCR*LLTRWA Trigger: AGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTG...CTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCACCCAGAAGTGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS GCA 90 bp | TGTGTTGAGGAGAACCAGTGTCGGAATATTTTATCACAGATGACTTaGAGGTTGCTGTTGACACGCTGGGCTCCACACTTGTGCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVEENQCRNILSQMT*RLLLTRWAPHLCTR Trigger: CCGAGTGCACAAGTGTGGAGCCCAGCGTGTCAACAGCAACCTGCAAGTCATCTGTGATAAAATATTCCGACACTGGTTCTCCTCAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAAATTGTGCCGCTAAGGACACACATTTTATTGCATTTAATTCCAGGGGGAGCGGGGCTATGCTGTaGTTGGGCAGCTCCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KANCAAKDTHFIAFNSRGSGAML*LGSSKP Trigger: AGGCTTGGAGCTGCCCAACAACAGCATAGCCCCGCT...CCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCACAATTTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | AAGATTCCTAGGGACACACTGAAAAGCCACCTCTCCATACAGGCTCCGAGTGCCACTCGGAGATCACACTaGGAGAAACAATCGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KIPRDTLKSHLSIQAPSATRRSH*EKQSKK Trigger: TTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGT...GGCACTCGGAGCCTGTATGGAGAGGTGGCTTTTCAGTGTGTCCCTAGGAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | ATGACTGGGTCATGGGCATGCGAATGTGCACACACACACACACACACACACACAACTCGGAGATCACACTaGGAGAAACAATCGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MTGSWACECAHTHTHTHTTRRSH*EKQSKK Trigger: TTTCTTCGATTGTTTCTCCAAGTGTGATCTCCGAGT...TGTGTGTGTGTGTGTGTGTGTGTGTGCACATTCGCATGCCCATGACCCAGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | CATTCATATATACAAACCCACTCATACACTCATGGGTGCAACATTATGCACACAGCTAATAGCCTGTGCTaGGCCAGCATCATCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSYIQTHSYTHGCNIMHTANSLC*ASIIQW Trigger: CCACTGGATGATGCTGGCCAAGCACAGGCTATTAGC...TGTGTGCATAATGTTGCACCCATGAGTGTATGAGTGGGTTTGTATATATGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCACTTACTCACTTCTGGATGTACACATGCATGCACTTCTGGGTGGATTCAAACAATCGAAGAAATaGCAATCTTCATCTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPTYSLLDVHMHALLGGFKQSKK*QSSSPV Trigger: CACGGGAGATGAAGATTGCAATTTCTTCGATTGTTT...GAATCCACCCAGAAGTGCATGCATGTGTACATCCAGAAGTGAGTAAGTGGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCACATGGATTCATCCATGAGCACAGATTCACAGGCACGATGACTGGGAAACAATCGAAGAAATaGCAATCTTCATCTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VDSHGFIHEHRFTGTMTGKQSKK*QSSSPV Trigger: CACGGGAGATGAAGATTGCAATTTCTTCGATTGTTT...CCCAGTCATCGTGCCTGTGAATCTGTGCTCATGGATGAATCCATGTGAATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052501.8 ENSMUST00000235504.2 |
||
| CDS GCA 72 bp | GAGGACGCTCGGGTGTGCGCGGAGCAGCAGCGCAGCTaGCAGCACCCAGCCGGCGGTCCACGCGGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EDARVCAEQQRS*QHPAGGPRGEG Trigger: GCCTTCGCCGCGTGGACCGCCGGCTGGGTGCTGGCAGCTGCGCTGCTGCTCCGCGCACACCCGAGCGTCCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161429.3 |
||
| CDS TCA 72 bp | CCCCGCCCACACACAGGTCCTCGCACAGGGCGCCCGTaGGCCAGCCACGGCGATAGTCCTGGCACAGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRPHTGPRTGRP*ASHGDSPGTAQ Trigger: CTGCGCTGTGCCAGGACTATCGCCGTGGCTGGCTCACGGGCGCCCTGTGCGAGGACCTGTGTGTGGGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161429.3 |
||
| CDS GCA 72 bp | ACAGCGCAGCCAGGATGCGCCGGCTCTTCTCATCCGTaGAGCGCTCGGAGAGGACGCTCGGGTGTGCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: TAQPGCAGSSHP*SARRGRSGVRG Trigger: TCCGCGCACACCCGAGCGTCCTCTCCGAGCGCTGCACGGATGAGAAGAGCCGGCGCATCCTGGCTGCGCTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159800.8 ENSMUST00000161429.3 ENSMUST00000237435.2 |
||
| CDS TCA 72 bp | GAGGCTGTCCAGGAATTCCCCGAGGAGCCCCCGTGCTaGGCACACTCCTGCACGGCCTGCTGTAGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAVQEFPEEPPC*AHSCTACCSCS Trigger: GCTGCAGCTACAGCAGGCCGTGCAGGAGTGTGCTCAGCACGGGGGCTCCTCGGGGAATTCCTGGACAGCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS GCA 72 bp | AGCCACGGCGATAGTCCTGGCACAGCGCAGCCAGGATaGGCCGGCTCTTCTCATCCGTGCAGCGCTCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHGDSPGTAQPG*AGSSHPCSARR Trigger: TCTCCGAGCGCTGCACGGATGAGAAGAGCCGGCGCATCCTGGCTGCGCTGTGCCAGGACTATCGCCGTGGCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161429.3 |
||
| CDS CCA 72 bp | CACTCCTGCACGGCCTGCTGTAGCTGCAGCCGAAGCTaGAGGGAGACAGCCGGGCTCCTGTGTGTTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSCTACCSCSRS*RETAGLLCVEE Trigger: CTCCTCAACACACAGGAGCCCGGCTGTCTCCCTCCAGCTTCGGCTGCAGCTACAGCAGGCCGTGCAGGAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 72 bp | ATACGTATTCCTCCTGTTGGAGCAGTGACCACGCACTaGCCAGCTGTTGCCGCCAGCCAGGGCCCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IRIPPVGAVTTH*PAVAASQGPAW Trigger: CCAGGCAGGGCCCTGGCTGGCGGCAACAGCTGGCCAGTGCGTGGTCACTGCTCCAACAGGAGGAATACGTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS TCA 72 bp | CAGGCTGAAGTATACGTATTCCTCCTGTTGGAGCAGTaGCCACGCACTGGCCAGCTGTTGCCGCCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QAEVYVFLLLEQ*PRTGQLLPPAR Trigger: CCTGGCTGGCGGCAACAGCTGGCCAGTGCGTGGTCACTGCTCCAACAGGAGGAATACGTATACTTCAGCCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 72 bp | TGGCCTGCAAGAGCCATCGAAGCTTCCAGAACACACTaGATGAGGCTGTCCAGGAATTCCCCGAGGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WPARAIEASRTH*MRLSRNSPRSP Trigger: GGGGCTCCTCGGGGAATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGCTTCGATGGCTCTTGCAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
||
| CDS CCA 72 bp | GTGGCTAATAGCCTGTGCTTGGCCAGCATCATCCAGTaGGAAGAGAGCCTTGTGGTGAGGGCTACCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VANSLCLASIIQ*EESLVVRATSS Trigger: GCTGCTGGTAGCCCTCACCACAAGGCTCTCTTCCCACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CAA 90 bp | CACCATGTCCAGGAAGCTGAGGGCAATGTGGCTAATAGCCTGTGCTaGGCCAGCATCATCCAGTGGGAAGAGAGCCTTGTGGTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HHVQEAEGNVANSLC*ASIIQWEESLVVRA Trigger: AGCCCTCACCACAAGGCTCTCTTCCCACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCACATTGCCCTCAGCTTCCTGGACATGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CCA 72 bp | CAGAGGTGGAGCCGGTGGGAAAAGTCACTGTCGAAATaGCTCACCATGTCCAGGAAGCTGAGGGCAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: QRWSRWEKSLSK*LTMSRKLRAMW Trigger: CCACATTGCCCTCAGCTTCCTGGACATGGTGAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CAA 72 bp | CAGGAAGCTGAGGGCAATGTGGCTAATAGCCTGTGCTaGGCCAGCATCATCCAGTGGGAAGAGAGCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QEAEGNVANSLC*ASIIQWEESLV Trigger: CACAAGGCTCTCTTCCCACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCACATTGCCCTCAGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CAA 72 bp | GCCGAAGCTGGAGGGAGACAGCCGGGCTCCTGTGTGTaGAGGAGAACCAGTGTCGGAATATTTTATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: AEAGGRQPGSCV*RRTSVGIFYHR Trigger: TCTGTGATAAAATATTCCGACACTGGTTCTCCTCAACACACAGGAGCCCGGCTGTCTCCCTCCAGCTTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS TCA 72 bp | CCGAAGCTGGAGGGAGACAGCCGGGCTCCTGTGTGTTaGGGAGAACCAGTGTCGGAATATTTTATCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: PKLEGDSRAPVC*GEPVSEYFITD Trigger: ATCTGTGATAAAATATTCCGACACTGGTTCTCCTCAACACACAGGAGCCCGGCTGTCTCCCTCCAGCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CCA 72 bp | AAATGGCTCACCATGTCCAGGAAGCTGAGGGCAATGTaGCTAATAGCCTGTGCTTGGCCAGCATCATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KWLTMSRKLRAM*LIACAWPASSS Trigger: ACTGGATGATGCTGGCCAAGCACAGGCTATTAGCCACATTGCCCTCAGCTTCCTGGACATGGTGAGCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CCA 72 bp | AAGTTCTCAGGTTTGACATCACAGAGGTGGAGCCGGTaGGAAAAGTCACTGTCGAAATGGCTCACCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: KFSGLTSQRWSR*EKSLSKWLTMS Trigger: GGACATGGTGAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CCA 72 bp | TTGATGGCGAAGTTCTCAGGTTTGACATCACAGAGGTaGAGCCGGTGGGAAAAGTCACTGTCGAAATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LMAKFSGLTSQR*SRWEKSLSKWL Trigger: GAGCCATTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTTCGCCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CAA 72 bp | ACCGTAAAGTCCCTCTTGATGGCGAAGTTCTCAGGTTaGACATCACAGAGGTGGAGCCGGTGGGAAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TVKSLLMAKFSG*TSQRWSRWEKS Trigger: TGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTTCGCCATCAAGAGGGACTTTACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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| CDS CAA 90 bp | ATAGCTACCACCGTAAAGTCCCTCTTGATGGCGAAGTTCTCAGGTTaGACATCACAGAGGTGGAGCCGGTGGGAAAAGTCACTGTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: IATTVKSLLMAKFSG*TSQRWSRWEKSLSK Trigger: TTTCGACAGTGACTTTTCCCACCGGCTCCACCTCTGTGATGTCAAACCTGAGAACTTCGCCATCAAGAGGGACTTTACGGTGGTAGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052501.8 ENSMUST00000161429.3 ENSMUST00000235504.2 |
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