Pregenerated sensors for DIPK1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029270Ensembl transcript IDs: ENSMUST00000031198.11, ENSMUST00000145239.2, ENSMUST00000153172.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAGTAAATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTaGCTTAATCCAGTCTTAGCTGAGGTGCTGTGCATCTTTATCATC | + |
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Preference number: 1 (lower is better) Translates to: LVNSPSSQKEQELSS*LNPVLAEVLCIFII Trigger: GATGATAAAGATGCACAGCACCTCAGCTAAGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTATTTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR CCA 90 bp | AAAAACCAGCTTACATGGGTTCCTGCAAATCTCATGAGTGTTTCTTaGGTTTCTAGTCTTCCTGGGAGGTGTCCTTATCTTTCAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: KNQLTWVPANLMSVS*VSSLPGRCPYLSDF Trigger: AAAATCTGAAAGATAAGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGGAACCCATGTAAGCTGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTGGCAGGGATGAGTTTTaGACATCTTGGCCCTACACC | + |
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Preference number: 2 (lower is better) Translates to: PANLMSVSWVSSLPGRCPGRDEF*TSWPYT Trigger: GGTGTAGGGCCAAGATGTCCAAAACTCATCCCTGCC...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGGAACACTCACTGTTTATaGAATGAGGATTTTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: FALPHSVRLCGTGATQVRNTHCL*NEDFHS Trigger: GCTGTGAAAATCCTCATTCCATAAACAGTGAGTGTT...CCTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR TCA 90 bp | ACATGGGTTCCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGGTAAAAGGGCAGGGATaGGTTTTGGACATCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: TWVPANLMSVSWVSSLPGVKGQG*VLDILA Trigger: GGCCAAGATGTCCAAAACTCATCCCTGCCCTTTTAC...CCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGGAACCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGGAAGAAAGTATCTCAAGGTCAATCTTGGAAGTGAACAACTGGTGCTAATGACTCCACAGGCCTaGGGGGCAGAAGCCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVGRKYLKVNLGSEQLVLMTPQA*GAEATL Trigger: AAGAGTGGCTTCTGCCCCCCAGGCCTGTGGAGTCAT...TAGCACCAGTTGTTCACTTCCAAGATTGACCTTGAGATACTTTCTTCCCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTAACAACGGTGAAATTTaGTTTGAGGAGAAGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PANLMSVSWVSSLPGRCPNNGEI*FEEKGV Trigger: CACCCCCTTCTCCTCAAACCAAATTTCACCGTTGTT...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR GCA 90 bp | ACATGGGTTCCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGTTAGCTGAGGTGCTGTaGATCTTTATCATCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: TWVPANLMSVSWVSSLPGLAEVL*IFIIFA Trigger: GGCAAAGATGATAAAGATGCACAGCACCTCAGCTAA...CCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGGAACCCATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGGAAGAAAGTATCTCAAGGTCAATCTTGGAAGTGAACAACTGGTGCTAGTCCGGCAATGGGACTaGCTAACATCTACAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: LVGRKYLKVNLGSEQLVLVRQWD*LTSTEH Trigger: GTGTTCTGTAGATGTTAGCCAGTCCCATTGCCGGAC...TAGCACCAGTTGTTCACTTCCAAGATTGACCTTGAGATACTTTCTTCCCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGGAAGAAAGTATCTCAAGGTCAATCTTGGAAGTGAACAACTGGTGCTAAACAATGTCCGGCAATaGGACTGGCTAACATCTACA | + |
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Preference number: 2 (lower is better) Translates to: LVGRKYLKVNLGSEQLVLNNVRQ*DWLTST Trigger: TGTAGATGTTAGCCAGTCCCATTGCCGGACATTGTT...TAGCACCAGTTGTTCACTTCCAAGATTGACCTTGAGATACTTTCTTCCCACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTGACGTTTCATTTTTATaGTACATGCCAGACATGAAT | + |
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Preference number: 2 (lower is better) Translates to: PANLMSVSWVSSLPGRCPDVSFL*YMPDMN Trigger: ATTCATGTCTGGCATGTACCATAAAAATGAAACGTC...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR TCA 72 bp | AGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTaGCTTAATCCAGTCTTAGCTGAGGTGCTGTGCATC | + |
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Preference number: 3 (lower is better) Translates to: SPSSQKEQELSS*LNPVLAEVLCI Trigger: GATGCACAGCACCTCAGCTAAGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR GCA 72 bp | AATATCAGGTTCACTTGGGAAAGCATTAGGTGCTTATaGCTCTTAGTAAATAGCCCTTCATCCCAGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NIRFTWESIRCL*LLVNSPSSQKE Trigger: CTCCTTCTGGGATGAAGGGCTATTTACTAAGAGGCATAAGCACCTAATGCTTTCCCAAGTGAACCTGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR TCA 72 bp | TACATCCCCAGCAAAGATAATGTGACGATACTAAGATaGACCTATCAGAGCTTAAAGATAATGAGTTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: YIPSKDNVTILR*TYQSLKIMSFS Trigger: ACTGAAACTCATTATCTTTAAGCTCTGATAGGTTCATCTTAGTATCGTCACATTATCTTTGCTGGGGATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGCTTCCCGAATTTCACTaGGAGCACCGTGCAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LCLASQCQALWYWGYTGQLPEFH*EHRAVG Trigger: ACCTACTGCACGGTGCTCCCAGTGAAATTCGGGAAG...CTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR GCA 90 bp | CTTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGACAGAGGCTGTTGCATaGAGGTCCGTCAATAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LCLASQCQALWYWGYTGQTEAVA*RSVNNS Trigger: GGAGTTATTGACGGACCTGCATGCAACAGCCTCTGT...CTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | TTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGGAGTACAGTGTTTCTGTaGCACAGAGGCTGTTGCATG | + |
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Preference number: 4 (lower is better) Translates to: FALPHSVRLCGTGATQVRSTVFL*HRGCCM Trigger: CATGCAACAGCCTCTGTGTCACAGAAACACTGTACT...CCTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGTCAGAGAGGTTCCCTTaGTCACCTAATTTTGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: LCLASQCQALWYWGYTGQSERFP*SPNFAL Trigger: TAAGGCAAAATTAGGTGACCAAGGGAACCTCTCTGA...CTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR CAA 72 bp | TTAGCTGAGGTGCTGTGCATCTTTATCATCTTTGCCTaGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LAEVLCIFIIFA*PHSVRLCGTGA Trigger: AGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAAGATGATAAAGATGCACAGCACCTCAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTAGGTCAGACTCACAGTaGCGGTCCTTAATAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PANLMSVSWVSSLPGRCPRSDSQ*RSLISS Trigger: GGAACTTATTAAGGACCGCCACTGTGAGTCTGACCT...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTAGAAACTCATTCAACTaGAGAAGTGCCCATGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PANLMSVSWVSSLPGRCPRNSFN*RSAHAD Trigger: GTCAGCATGGGCACTTCTTCAGTTGAATGAGTTTCT...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTTGGGCCATGATGGTGTaGACAATTGATCCATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IALHPRRSKNCLPDLIQSWAMMV*TIDPCS Trigger: GGAGCATGGATCAATTGTTCACACCATCATGGCCCA...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTCACTGGTGTCACACATaGGAAAGTTTCCATAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: IALHPRRSKNCLPDLIQSHWCHT*ESFHRG Trigger: GCCCCTATGGAAACTTTCTCATGTGTGACACCAGTG...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | ACATGGGTTCCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGGCAGTAGGTAGTCTTTaGGTAACTGACAGGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TWVPANLMSVSWVSSLPGAVGSL*VTDRLL Trigger: CAAAAGCCTGTCAGTTACTCAAAGACTACCTACTGC...CCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGGAACCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | TTTTGGACATCTTGGCCCTACACCTGCCATTATTGTTACAACATGCATTTAAGATCTCCTAGGGAGACCTaGCCATCTCTGTCTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: FWTSWPYTCHYCYNMHLRSPRET*PSLSPS Trigger: TGACGGAGACAGAGATGGCCAGGTCTCCCTAGGAGA...TCTTAAATGCATGTTGTAACAATAATGGCAGGTGTAGGGCCAAGATGTCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTGATGGTGTGAACAATTaGTCCATGCTCCTTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: IALHPRRSKNCLPDLIQSDGVNN*SMLLLN Trigger: GTTCAGAAGGAGCATGGATCAATTGTTCACACCATC...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTAATACTGCACATATATaGTCCAGCTTCCGACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: PANLMSVSWVSSLPGRCPNTAHI*SSFRQK Trigger: TTTTTGTCGGAAGCTGGATCATATATGTGCAGTATT...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTAGAATCCCATTAGTTTaGGGGTGTGTTCTTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: PANLMSVSWVSSLPGRCPRIPLV*GCVLYL Trigger: AAGATAAAGAACACACCCCCAAACTAATGGGATTCT...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | TTAGTGGGAAGAAAGTATCTCAAGGTCAATCTTGGAAGTGAACAACTGGTGCTAAGAGCTTGTTCCATTTaGCACTTCACAACACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LVGRKYLKVNLGSEQLVLRACSI*HFTTPG Trigger: ACCAGGTGTTGTGAAGTGTCAAATGGAACAAGCTCT...TAGCACCAGTTGTTCACTTCCAAGATTGACCTTGAGATACTTTCTTCCCACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTGTGTGTTCTTTATCTTaGAGTATCACCATCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IALHPRRSKNCLPDLIQSVCSLS*SITIRR Trigger: TCTCCTGATGGTGATACTTCAAGATAAAGAACACAC...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR TCA 90 bp | TTTTGGACATCTTGGCCCTACACCTGCCATTATTGTTACAACATGCATTTAAGATGCCTTTCTGGGCCATaGTGGTGTGAACAATTGATC | + |
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Preference number: 4 (lower is better) Translates to: FWTSWPYTCHYCYNMHLRCLSGP*WCEQLI Trigger: GATCAATTGTTCACACCATCATGGCCCAGAAAGGCA...TCTTAAATGCATGTTGTAACAATAATGGCAGGTGTAGGGCCAAGATGTCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | TTTTGGACATCTTGGCCCTACACCTGCCATTATTGTTACAACATGCATTTAAGAAATACATCTGGTTGCTaGGCTTGTTGGACAGACATT | + |
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Preference number: 4 (lower is better) Translates to: FWTSWPYTCHYCYNMHLRNTSGC*ACWTDI Trigger: AATGTCTGTCCAACAAGCCCAGCAACCAGATGTATT...TCTTAAATGCATGTTGTAACAATAATGGCAGGTGTAGGGCCAAGATGTCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| 3UTR CAA 72 bp | GGCTTTAAAGATTTGAGAACAACGGTGAAATTTGGTTaGAGGAGAAGGGGGTGTCTAGGACGTTTCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: GFKDLRTTVKFG*RRRGCLGRFIF Trigger: AAAAATGAAACGTCCTAGACACCCCCTTCTCCTCAAACCAAATTTCACCGTTGTTCTCAAATCTTTAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CCA 90 bp | TTTTGGACATCTTGGCCCTACACCTGCCATTATTGTTACAACATGCATTTAAGAATTCTAGAAGTCCTATaGCTATCTTTGCCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FWTSWPYTCHYCYNMHLRILEVL*LSLPFW Trigger: CCAGAAAGGCAAAGATAGCCATAGGACTTCTAGAAT...TCTTAAATGCATGTTGTAACAATAATGGCAGGTGTAGGGCCAAGATGTCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR GCA 90 bp | GCTAACATCTACAGAACACTCACTGTTTATGGAATGAGGATTTTCACAGCATTAGTATTACTTCAGAAGTaGACTTCATTGTACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ANIYRTLTVYGMRIFTALVLLQK*TSLYSG Trigger: ACCTGAGTACAATGAAGTGCACTTCTGAAGTAATAC...TAATGCTGTGAAAATCCTCATTCCATAAACAGTGAGTGTTCTGTAGATGTTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | CTTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGGTGACACAGAGGCTGTaGCATGCAGGTCCGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: LCLASQCQALWYWGYTGQVTQRL*HAGPSI Trigger: TATTGACGGACCTGCATGCAACAGCCTCTGTGTCAC...CTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | TTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGGAAGAGCTTGTTCCATTaGACACTTCACAACACCTGG | + |
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Preference number: 5 (lower is better) Translates to: FALPHSVRLCGTGATQVRKSLFH*TLHNTW Trigger: CCAGGTGTTGTGAAGTGTCAAATGGAACAAGCTCTT...CCTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | TTTGCCTTGCCTCACAGTGTCAGGCTCTGTGGTACTGGGGCTACACAGGTCAGGGTAACTGACAGGCTTTaGCCAAGTTTGGTTGTATTA | + |
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Preference number: 5 (lower is better) Translates to: FALPHSVRLCGTGATQVRVTDRL*PSLVVL Trigger: TAATACAACCAAACTTGGCAAAAGCCTGTCAGTTAC...CCTGACCTGTGTAGCCCCAGTACCACAGAGCCTGACACTGTGAGGCAAGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | CTCAAGGTCAATCTTGGAAGTGAACAACTGGTGCTAATCCATGGCTTTAAAGATAGTGCCCATGCTGACTaGGCTTCTCCTAGGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: LKVNLGSEQLVLIHGFKDSAHAD*ASPRET Trigger: GGTCTCCCTAGGAGAAGCCAAGTCAGCATGGGCACT...ATCTTTAAAGCCATGGATTAGCACCAGTTGTTCACTTCCAAGATTGACCTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS GCA 90 bp | ACATTTTCCAAAGTACAGTGTTTCTGTGACACAGAGGCTGTTGCATaGAGGTCCGTCAATAACTCCGGTCTTGTATTTGTCACACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TFSKVQCFCDTEAVA*RSVNNSGLVFVTLE Trigger: CTCCAGTGTGACAAATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTTGGAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145239.2 |
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| CDS-3UTR CAA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTCCTAAATACATCTGGTaGCTGGGCTTGTTGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: IALHPRRSKNCLPDLIQSPKYIW*LGLLDR Trigger: TCTGTCCAACAAGCCCAGCAACCAGATGTATTTAGG...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTGGTGTGTTCTTTATCTaGAAGTATCACCATCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PANLMSVSWVSSLPGRCPGVFFI*KYHHQE Trigger: CTCCTGATGGTGATACTTCAAGATAAAGAACACACC...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTCAGAATCCCATTAGTTaGGGGGTGTGTTCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: PANLMSVSWVSSLPGRCPQNPIS*GVCSLS Trigger: AGATAAAGAACACACCCCCAAACTAATGGGATTCTG...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | CCTGCAAATCTCATGAGTGTTTCTTGGGTTTCTAGTCTTCCTGGGAGGTGTCCTTTATATCCTAGGTTTTaGGCACTGGTGTCACACATG | + |
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Preference number: 5 (lower is better) Translates to: PANLMSVSWVSSLPGRCPLYPRF*ALVSHM Trigger: CATGTGTGACACCAGTGCCAAAAACCTAGGATATAA...AGGACACCTCCCAGGAAGACTAGAAACCCAAGAAACACTCATGAGATTTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS TCA 90 bp | ATTCTTCCCGAATTTCACTGGGAGCACCGTGCAGTAGGTAGTCTTTaGGTAACTGACAGGCTTTTGCCAAGTTTGGTTGTATTACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ILPEFHWEHRAVGSL*VTDRLLPSLVVLLQ Trigger: CTGAAGTAATACAACCAAACTTGGCAAAAGCCTGTCAGTTACTCAAAGACTACCTACTGCACGGTGCTCCCAGTGAAATTCGGGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS TCA 90 bp | CCTATGGCTATCTTTGCCTTTCTGGGCCATGATGGTGTGAACAATTaGTCCATGCTCCTTCTGAACCCAGATGGAATAAAAAGTTCCATA | + |
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Preference number: 5 (lower is better) Translates to: PMAIFAFLGHDGVNN*SMLLLNPDGIKSSI Trigger: TATGGAACTTTTTATTCCATCTGGGTTCAGAAGGAGCATGGATCAATTGTTCACACCATCATGGCCCAGAAAGGCAAAGATAGCCATAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS GCA 90 bp | ACATTTTCCAAAGTACAGTGTTTCTGTGACACAGAGGCTGTTGCATaGAGGTCCGTCAATAACTCCGGTCTTGTATTTGTCACATATGAT | + |
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Preference number: 5 (lower is better) Translates to: TFSKVQCFCDTEAVA*RSVNNSGLVFVTYD Trigger: ATCATATGTGACAAATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTTGGAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS CCA 90 bp | CAACACTTTCCATCACGTAGAGATCACCACAGAATCCCATTAGTTTaGGGGTGTGTTCTTTATCTTGAAGTATCACCATCAGGAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: QHFPSRRDHHRIPLV*GCVLYLEVSPSGET Trigger: AGTTTCTCCTGATGGTGATACTTCAAGATAAAGAACACACCCCCAAACTAATGGGATTCTGTGGTGATCTCTACGTGATGGAAAGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS-3UTR CAA 90 bp | ATAGCCCTTCATCCCAGAAGGAGCAAGAATTGTCTTCCTGACTTAATCCAGTCTATCAAGATGAAGAGCTaGTTCCATTTGACACTTCAC | + |
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Preference number: 5 (lower is better) Translates to: IALHPRRSKNCLPDLIQSIKMKS*FHLTLH Trigger: GTGAAGTGTCAAATGGAACAAGCTCTTCATCTTGAT...AGACTGGATTAAGTCAGGAAGACAATTCTTGCTCCTTCTGGGATGAAGGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS-3UTR CAA 90 bp | GCTAACATCTACAGAACACTCACTGTTTATGGAATGAGGATTTTCACAGCATTATTTTGCCAAGTTTGGTaGTATTACTTCAGAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: ANIYRTLTVYGMRIFTALFCQVW*YYFRSA Trigger: TGCACTTCTGAAGTAATACAACCAAACTTGGCAAAA...TAATGCTGTGAAAATCCTCATTCCATAAACAGTGAGTGTTCTGTAGATGTTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS CCA 72 bp | AGTGCCCATGCTGACTTGGCTTCTCCTAGGGAGACCTaGCCATCTCTGTCTCCGTCAGCCACTGTCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SAHADLASPRET*PSLSPSATVKM Trigger: CATCTTGACAGTGGCTGACGGAGACAGAGATGGCCAGGTCTCCCTAGGAGAAGCCAAGTCAGCATGGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CCA 72 bp | GAAACTCATTCAACTGAAGAAGTGCCCATGCTGACTTaGCTTCTCCTAGGGAGACCTGGCCATCTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ETHSTEEVPMLT*LLLGRPGHLCL Trigger: GAGACAGAGATGGCCAGGTCTCCCTAGGAGAAGCCAAGTCAGCATGGGCACTTCTTCAGTTGAATGAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CAA 90 bp | GACAGACATTTTCCAAAGTACAGTGTTTCTGTGACACAGAGGCTGTaGCATGCAGGTCCGTCAATAACTCCGGTCTTGTATTTGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: DRHFPKYSVSVTQRL*HAGPSITPVLYLSH Trigger: GTGTGACAAATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTTGGAAAATGTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145239.2 |
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| CDS TCA 72 bp | GAATTTCACTGGGAGCACCGTGCAGTAGGTAGTCTTTaGGTAACTGACAGGCTTTTGCCAAGTTTGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: EFHWEHRAVGSL*VTDRLLPSLVV Trigger: TACAACCAAACTTGGCAAAAGCCTGTCAGTTACTCAAAGACTACCTACTGCACGGTGCTCCCAGTGAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS GCA 72 bp | AAAGTACAGTGTTTCTGTGACACAGAGGCTGTTGCATaGAGGTCCGTCAATAACTCCGGTCTTGTATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: KVQCFCDTEAVA*RSVNNSGLVFV Trigger: GACAAATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CAA 72 bp | TTTCCAAAGTACAGTGTTTCTGTGACACAGAGGCTGTaGCATGCAGGTCCGTCAATAACTCCGGTCTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: FPKYSVSVTQRL*HAGPSITPVLY Trigger: ATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CAA 90 bp | GACAGACATTTTCCAAAGTACAGTGTTTCTGTGACACAGAGGCTGTaGCATGCAGGTCCGTCAATAACTCCGGTCTTGTATTTGTCACAT | + |
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Preference number: 6 (lower is better) Translates to: DRHFPKYSVSVTQRL*HAGPSITPVLYLSH Trigger: ATGTGACAAATACAAGACCGGAGTTATTGACGGACCTGCATGCAACAGCCTCTGTGTCACAGAAACACTGTACTTTGGAAAATGTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031198.11 |
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| CDS TCA 72 bp | TGCATAGCTCTGTATAGGTTGAATACTGCACATATATaGTCCAGCTTCCGACAAAAACCACCAGCCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CIALYRLNTAHI*SSFRQKPPARK Trigger: TTTCCTGGCTGGTGGTTTTTGTCGGAAGCTGGATCATATATGTGCAGTATTCAACCTATACAGAGCTATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000153172.2 |
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| CDS CCA 72 bp | GTCAAGATGAGATTAACCAATTCAGAGAGGTTCCCTTaGTCACCTAATTTTGCCTTAAAGAGACTGTACACC | + |
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Preference number: 6 (lower is better) Translates to: VKMRLTNSERFP*SPNFALKRLYT Trigger: GGTGTACAGTCTCTTTAAGGCAAAATTAGGTGACCAAGGGAACCTCTCTGAATTGGTTAATCTCATCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CAA 90 bp | CCTTGGTCACCTAATTTTGCCTTAAAGAGACTGTACACCATTTCTTaGAATTTCTGTACAGTAGTTCCCCTGGTTGGTTTATCAAATAGC | + |
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Preference number: 6 (lower is better) Translates to: PWSPNFALKRLYTIS*NFCTVVPLVGLSNS Trigger: GCTATTTGATAAACCAACCAGGGGAACTACTGTACAGAAATTCAAAGAAATGGTGTACAGTCTCTTTAAGGCAAAATTAGGTGACCAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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| CDS CAA 72 bp | CCTAATTTTGCCTTAAAGAGACTGTACACCATTTCTTaGAATTTCTGTACAGTAGTTCCCCTGGTTGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PNFALKRLYTIS*NFCTVVPLVGL Trigger: TAAACCAACCAGGGGAACTACTGTACAGAAATTCAAAGAAATGGTGTACAGTCTCTTTAAGGCAAAATTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031198.11 ENSMUST00000145239.2 |
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