Pregenerated sensors for DIO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075707Ensembl transcript IDs: ENSMUST00000097228.5, ENSMUST00000173014.3
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCCCTGCGCTCGACAGGTGGGTGCCAGGCAACTAGCTAGAGCCTaGGGCGCTGCTGGAACCCAGCTGCGCTCAGGGCGCGCGGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: TPCARQVGARQLARA*GAAGTQLRSGRAGV Trigger: CACGCCCGCGCGCCCTGAGCGCAGCTGGGTTCCAGCAGCGCCTCAGGCTCTAGCTAGTTGCCTGGCACCCACCTGTCGAGCGCAGGGAGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR GCA 90 bp | GCGCTCAGGGCGCGCGGGCGTGGCCAACAAGTCCGAGCTGTGAAATaGTGGGGACTTTCGCGCTTTGCCGAAGCAGCGCTGGAGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: ALRARGRGQQVRAVK*WGLSRFAEAALETW Trigger: CCAGGTCTCCAGCGCTGCTTCGGCAAAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 90 bp | CCTGAGGCGCTGCTGGAACCCAGCTGCGCTCAGGGCGCGCGGGCGTaGCCAACAAGTCCGAGCTGTGAAATGCTGGGGACTTTCGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: PEALLEPSCAQGARA*PTSPSCEMLGTFAL Trigger: AAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAGCGCAGCTGGGTTCCAGCAGCGCCTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR TCA 90 bp | CAGCTGCGCTCAGGGCGCGCGGGCGTGGCCAACAAGTCCGAGCTGTaGAATGCTGGGGACTTTCGCGCTTTGCCGAAGCAGCGCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: QLRSGRAGVANKSEL*NAGDFRALPKQRWR Trigger: TCTCCAGCGCTGCTTCGGCAAAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAGCGCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 90 bp | CTCAGGGCGCGCGGGCGTGGCCAACAAGTCCGAGCTGTGAAATGCTaGGGACTTTCGCGCTTTGCCGAAGCAGCGCTGGAGACCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LRARGRGQQVRAVKC*GLSRFAEAALETWC Trigger: ACACCAGGTCTCCAGCGCTGCTTCGGCAAAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR GCA 90 bp | TGGCCAACAAGTCCGAGCTGTGAAATGCTGGGGACTTTCGCGCTTTaGCGAAGCAGCGCTGGAGACCTGGTGTCAGAAAGTCCAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: WPTSPSCEMLGTFAL*RSSAGDLVSESPAG Trigger: ACCTGCTGGACTTTCTGACACCAGGTCTCCAGCGCTGCTTCGGCAAAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 90 bp | TGCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTaGAGCATTTGCACGTGGGCTTCGAAGGCCCAGGAGACCCGGCCC | + |
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Preference number: 1 (lower is better) Translates to: CSSVSWGSPTTFDFL*SICTWASKAQETRP Trigger: GGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR GCA 90 bp | GTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTaGACGTGGGCTTCGAAGGCCCAGGAGACCCGGCCCACCAATTCA | + |
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Preference number: 1 (lower is better) Translates to: VSWGSPTTFDFLWSI*TWASKAQETRPTNS Trigger: TGAATTGGTGGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 90 bp | TGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTaGGCTTCGAAGGCCCAGGAGACCCGGCCCACCAATTCAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: WGSPTTFDFLWSICT*ASKAQETRPTNSVT Trigger: AGTGACTGAATTGGTGGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR TCA 90 bp | TCTGTGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTTaGCTTTCTTTGGAGCATTTGCACGTGGGCTTCGAAGGCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SVAVLICVMGIPHNL*LSLEHLHVGFEGPG Trigger: TCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR GCA 90 bp | AGCGCACCCAAAGCTAGGCGGGGAAATTACCCTGCCCACCCTTTCCCTATCTCGCTGCTGGAACCCAGCTaGGCTCAGGGCGCGCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SAPKARRGNYPAHPFPISLLEPS*AQGARA Trigger: CGCCCGCGCGCCCTGAGCGCAGCTGGGTTCCAGCAG...CGAGATAGGGAAAGGGTGGGCAGGGTAATTTCCCCGCCTAGCTTTGGGTGCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | AGCGCACCCAAAGCTAGGCGGGGAAATTACCCTGCCCACCCTTTCCCTATCTCGCAGGGCGCGCGGGCGTaGCCAACAAGTCCGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SAPKARRGNYPAHPFPISQGARA*PTSPSC Trigger: ACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTG...CGAGATAGGGAAAGGGTGGGCAGGGTAATTTCCCCGCCTAGCTTTGGGTGCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCGACGGTTCCCTGTGGAACCCAGAGCACTCTCCCCCTCTTACTTTAGGCCTGCTGGAACCCAGCTaGGCTCAGGGCGCGCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: FFDGSLWNPEHSPPLTLGLLEPS*AQGARA Trigger: CGCCCGCGCGCCCTGAGCGCAGCTGGGTTCCAGCAG...GCCTAAAGTAAGAGGGGGAGAGTGCTCTGGGTTCCACAGGGAACCGTCGAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAAAGCAGCAGGACTCCCTGCGCTCGACAGGTGGGTGCCAGGCAACTAGCTTTGCCGAAGCAGCGCTaGAGACCTGGTGTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HKSSRTPCARQVGARQLALPKQR*RPGVRK Trigger: CTTTCTGACACCAGGTCTCCAGCGCTGCTTCGGCAA...AGCTAGTTGCCTGGCACCCACCTGTCGAGCGCAGGGAGTCCTGCTGCTTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | AATGTTTCCAACACAACATTCACTGATTGGTCTTCACCCCGCCCCACAACCCGCAGCCTGAGGCGCTGCTaGAACCCAGCTGCGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NVSNTTFTDWSSPRPTTRSLRRC*NPAALR Trigger: CCTGAGCGCAGCTGGGTTCCAGCAGCGCCTCAGGCT...GCGGGTTGTGGGGCGGGGTGAAGACCAATCAGTGAATGTTGTGTTGGAAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR CAA 90 bp | TTCTGTGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTaGACTTTCTTTGGAGCATTTGCACGTGGGCTTCGAAGGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FCGCAHLCHGDPPQP*TFFGAFARGLRRPR Trigger: CCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | GCGCACCCAAAGCTAGGCGGGGAAATTACCCTGCCCACCCTTTCCCTATCTCGAACCTTTGACTTTCTTTaGAGCATTTGCACGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: AHPKLGGEITLPTLSLSRTFDFL*SICTWA Trigger: AGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGT...TCGAGATAGGGAAAGGGTGGGCAGGGTAATTTCCCCGCCTAGCTTTGGGTGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTGGTCTCGAAGTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGTTGCCGAAGCAGCGCTaGAGACCTGGTGTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SFGLEVHPLPCPSSTPFSLPKQR*RPGVRK Trigger: CTTTCTGACACCAGGTCTCCAGCGCTGCTTCGGCAA...CGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGACTTCGAGACCAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR-3UTR CCA 90 bp | AACACAACATTCACTGATTGGTCTTCACCCCGCCCCACAACCCGCGCTTTCTGCACCTTTGACTTTCTTTaGAGCATTTGCACGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NTTFTDWSSPRPTTRAFCTFDFL*SICTWA Trigger: AGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGT...GCAGAAAGCGCGGGTTGTGGGGCGGGGTGAAGACCAATCAGTGAATGTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR CCA 72 bp | CTGCTGGAACCCAGCTGCGCTCAGGGCGCGCGGGCGTaGCCAACAAGTCCGAGCTGTGAAATGCTGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: LLEPSCAQGARA*PTSPSCEMLGT Trigger: AGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAGCGCAGCTGGGTTCCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR TCA 72 bp | TCAGGGCGCGCGGGCGTGGCCAACAAGTCCGAGCTGTaGAATGCTGGGGACTTTCGCGCTTTGCCGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SGRAGVANKSEL*NAGDFRALPKQ Trigger: CTGCTTCGGCAAAGCGCGAAAGTCCCCAGCATTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR GCA 72 bp | GGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTaGACGTGGGCTTCGAAGGCCCAGGAGACCCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GSPTTFDFLWSI*TWASKAQETRP Trigger: GGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 72 bp | CCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTaGGCTTCGAAGGCCCAGGAGACCCGGCCCACCAAT | + |
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Preference number: 3 (lower is better) Translates to: PTTFDFLWSICT*ASKAQETRPTN Trigger: ATTGGTGGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 72 bp | CTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTaGTCAAGCCCAGTTAGAGGCGGTTCGTCATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LFRASLQFRADP*SSPVRGGSSSA Trigger: TGCTGATGACGAACCGCCTCTAACTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCCTGAGTTCTGTGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTTCTTTGGAGCATTaGCACGTGGGCTTCGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LSLSSVAVLICVMGIPHNLSLEH*HVGFEG Trigger: GCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAG...GTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCACAGAACTCAGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGGAACCCAGAGCACTCTCCCCCTCTTACTTTAGGCGCTGTTTCGAGCCTCTTTCTTTGGAGCATTaGCACGTGGGCTTCGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: PVEPRALSPSYFRRCFEPLSLEH*HVGFEG Trigger: GCCTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAG...AGGCTCGAAACAGCGCCTAAAGTAAGAGGGGGAGAGTGCTCTGGGTTCCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR GCA 72 bp | GGGATAAGAAATAAACACAAAAGCAGCAGGACTCCCTaGGCTCGACAGGTGGGTGCCAGGCAACTAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: GIRNKHKSSRTP*ARQVGARQLAR Trigger: TCTAGCTAGTTGCCTGGCACCCACCTGTCGAGCGCAGGGAGTCCTGCTGCTTTTGTGTTTATTTCTTATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 72 bp | CGAACCTCGCAGATTGATTCCCCAAGCCACTTCCTTTaGTCTCGAAGTCCATCCCTTACCATGTCCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RTSQIDSPSHFL*SRSPSLTMSLF Trigger: GAAGAGGGACATGGTAAGGGATGGACTTCGAGACCAAAGGAAGTGGCTTGGGGAATCAATCTGCGAGGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR TCA 72 bp | GTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTTaGCTTTCTTTGGAGCATTTGCACGTGGGCTTCGAA | + |
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Preference number: 3 (lower is better) Translates to: VLICVMGIPHNL*LSLEHLHVGFE Trigger: TTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR CCA 72 bp | TACACAAGGAATGTTTCCAACACAACATTCACTGATTaGTCTTCACCCCGCCCCACAACCCGCGCTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: YTRNVSNTTFTD*SSPRPTTRAFC Trigger: GCAGAAAGCGCGGGTTGTGGGGCGGGGTGAAGACCAATCAGTGAATGTTGTGTTGGAAACATTCCTTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR TCA 72 bp | GGACAAAGCTGTCAGTTCGAGCCACAGCAATGCTCCTaGGAGCAAGCCAAAAACGTACAAAAGGGAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: GQSCQFEPQQCS*EQAKNVQKGVT Trigger: AGTGACTCCCTTTTGTACGTTTTTGGCTTGCTCTCAGGAGCATTGCTGTGGCTCGAACTGACAGCTTTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| 3UTR TCA 72 bp | TTTATACACAAGGAATGTTTCCAACACAACATTCACTaGTTGGTCTTCACCCCGCCCCACAACCCGCGCTTT | + |
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Preference number: 3 (lower is better) Translates to: FIHKECFQHNIH*LVFTPPHNPRF Trigger: AAAGCGCGGGTTGTGGGGCGGGGTGAAGACCAATCAGTGAATGTTGTGTTGGAAACATTCCTTGTGTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | AGGCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCAGGAGAGCGGAGCATGGTaGCCGCGGGCCCCGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RRCFEPLCNSEPTRGQAQESGAW*PRAPKP Trigger: GGGCTTCGGGGCCCGCGGCCACCATGCTCCGCTCTC...CTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGTTCGTCATCAGCAGCCAGGGCTCCAGCGCACCCAAAGCTAGGCGGGGGGCCACGGCCTCCCTaGTACATGATGGTGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: RGGSSSAARAPAHPKLGGGPRPP*YMMVPL Trigger: GAGTGGCACCATCATGTACCAGGGAGGCCGTGGCCC...CCCGCCTAGCTTTGGGTGCGCTGGAGCCCTGGCTGCTGATGACGAACCGCCTCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | CCTGTGGAACCCAGAGCACTCTCCCCCTCTTACTTTAGGCGCTGTTTCGAGCCTGCAGAGAGCGGAGCATaGTGGCCGCGGGCCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PVEPRALSPSYFRRCFEPAESGA*WPRAPK Trigger: CTTCGGGGCCCGCGGCCACCATGCTCCGCTCTCTGC...AGGCTCGAAACAGCGCCTAAAGTAAGAGGGGGAGAGTGCTCTGGGTTCCACAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTGAGTTCTGTGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACAGGCACGAGGCGGTCTaGGCGCAGAGCCTCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLSSVAVLICVMGIPHNRHEAV*AQSLSE Trigger: CTCGCTGAGGCTCTGCGCCCAGACCGCCTCGTGCCT...GTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCACAGAACTCAGGCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | TTTCGCGCTTTGCCGAAGCAGCGCTGGAGACCTGGTGTCAGAAAGTCCAGCAGGCGCTCATCCGCGCCATaGACGGTGGTCAGGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: FRALPKQRWRPGVRKSSRRSSAP*TVVRYS Trigger: GCTGTACCTGACCACCGTTCATGGCGCGGATGAGCG...CCTGCTGGACTTTCTGACACCAGGTCTCCAGCGCTGCTTCGGCAAAGCGCGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | ATTTGCACGTGGGCTTCGAAGGCCCAGGAGACCCGGCCCACCAATTCAGTCACTCATGCCACACGGCTTTaGGAGAGGCCAGGGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: ICTWASKAQETRPTNSVTHATRL*ERPGCT Trigger: TGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATG...AGTGACTGAATTGGTGGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR GCA 90 bp | GTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGACGGTTCCCTGTGGACGGGCGGGTCCCTTGTaGGTAGTCGAGGATGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VHPLPCPSSTPFSTVPCGRAGPL*VVEDAL Trigger: CAGCGCATCCTCGACTACGCACAAGGGACCCGCCCG...TCCACAGGGAACCGTCGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | GGAGTCACTATAGCAGAGTCTCAAGTTAGCCAGACTCAGCCTGAGTTCTGTGGCCGCGCTGGTACTTGGTaGCCAGGCGCTGGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GVTIAESQVSQTQPEFCGRAGTW*PGAGRR Trigger: GCGCCTTCCAGCGCCTGGTCACCAAGTACCAGCGCG...GCCACAGAACTCAGGCTGAGTCTGGCTAACTTGAGACTCTGCTATAGTGACTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | GTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGACGGTTCCCTGTGGACAGAGCCTCAGCGAGTaGAGCAGCAGAGAGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VHPLPCPSSTPFSTVPCGQSLSE*SSRERS Trigger: GCTCCGCTCTCTGCTGCTTCACTCGCTGAGGCTCTG...TCCACAGGGAACCGTCGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | CTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTCGCGCTGGTACTTGGTaGCCAGGCGCTGGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LCHGDPPQPLTFFGAFARRAGTW*PGAGRR Trigger: GCGCCTTCCAGCGCCTGGTCACCAAGTACCAGCGCG...ACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | CATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTGGGCTTGTACTCTCGCTGCGCTaGCACGGTCCTCCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HGDPPQPLTFFGAFARGLVLSLR*HGPPGC Trigger: GCAGCCTGGAGGACCGTGTCAGCGCAGCGAGAGTAC...AAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | AGGCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCAGTGGTGCCACTCTGGATaGCGTAGAGGCGCTCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: RRCFEPLCNSEPTRGQAQWCHSG*RRGAQN Trigger: ATTTTGAGCGCCTCTACGTCATCCAGAGTGGCACCA...CTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR TCA 90 bp | CGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCAGTTACCTCGCCTTCACTGTTaGGCTCTACTTCGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RCFEPLCNSEPTRGQAQLPRLHC*ALLRAQ Trigger: CTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGG...TAACTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTGGTCTCGAAGTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGTTGGTGACCAGGCGCTaGAAGGCGCTCATCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLEVHPLPCPSSTPFSLVTRR*KALIRA Trigger: GGCGCGGATGAGCGCCTTCCAGCGCCTGGTCACCAA...CGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGACTTCGAGACCAAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | CCTGTGGAACCCAGAGCACTCTCCCCCTCTTACTTTAGGCGCTGTTTCGAGCCTAAGTCAACGTCGCGCTaGTACTTGGTGACCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVEPRALSPSYFRRCFEPKSTSR*YLVTRR Trigger: GCGCCTGGTCACCAAGTACCAGCGCGACGTTGACTT...AGGCTCGAAACAGCGCCTAAAGTAAGAGGGGGAGAGTGCTCTGGGTTCCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CCA 90 bp | GCGCACCCAAAGCTAGGCGGGGAAATTACCCTGCCCACCCTTTCCCTATCTCGAGCTGGGCCACCCTCATaGGCTTGCTTGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHPKLGGEITLPTLSLSRAGPPS*ACLKKS Trigger: GGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGC...TCGAGATAGGGAAAGGGTGGGCAGGGTAATTTCCCCGCCTAGCTTTGGGTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTGAGTTCTGTGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACAGCGCTCCAACCAAGTaGGCAACTCAGACACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSVAVLICVMGIPHNSAPTK*ATQTPG Trigger: ACCAGGTGTCTGAGTTGCGCACTTGGTTGGAGCGCT...GTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCACAGAACTCAGGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTGGGCTTCGAAGAGGGTGAATCTGTGGTaGCCCAGCCGTCGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPTTFDFLWSICTWASKRVNLW*PSRRMG Trigger: ACCCATCCGACGGCTGGGTCACCACAGATTCACCCT...CTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | CATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTGGGCTTAGGGTGAATCTGTGGTaGCCCAGCCGTCGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGDPPQPLTFFGAFARGLRVNLW*PSRRMG Trigger: ACCCATCCGACGGCTGGGTCACCACAGATTCACCCT...AAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | GCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTTTGGTGACCAGGCGCTaGAAGGCGCTCATCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHLCHGDPPQPLTFFGAFLVTRR*KALIRA Trigger: GGCGCGGATGAGCGCCTTCCAGCGCCTGGTCACCAA...AAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | GGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTGGGCTTCGAAGGACCCAGCCGTCGGATaGGTGGGCTTCCTCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSPTTFDFLWSICTWASKDPAVG*VGFLDV Trigger: TACATCGAGGAAGCCCACCCATCCGACGGCTGGGTC...CTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTGGGCTTCGAAGCAGACGGTTGTCGTCTaGTACGCATATGGGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPTTFDFLWSICTWASKQTVVV*YAYGRV Trigger: GACCCGCCCATATGCGTATCAGACGACAACCGTCTG...CTTCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCGGCGCAGGAAATGCTTaGGGATGCACAAGAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGAVSSLSAIQSRPVVKPGAGNA*GCTRNL Trigger: TAGATTTCTTGTGCATCCGCAAGCATTTCCTGCGCC...GGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | GGAGTCACTATAGCAGAGTCTCAAGTTAGCCAGACTCAGCCTGAGTTCTGTGGCAAGTCAACGTCGCGCTaGTACTTGGTGACCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTIAESQVSQTQPEFCGKSTSR*YLVTRR Trigger: GCGCCTGGTCACCAAGTACCAGCGCGACGTTGACTT...GCCACAGAACTCAGGCTGAGTCTGGCTAACTTGAGACTCTGCTATAGTGACTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCAGAAGAAATCCAATTTCTaGCCATGCCACACGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRCFEPLCNSEPTRGQAQKKSNF*PCHTAL Trigger: CAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTT...CTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | ATAAGAAATAAACACAAAAGCAGCAGGACTCCCTGCGCTCGACAGGTGGGTGCCCCGCGCCATGAACGGTaGTCAGGTACAGCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRNKHKSSRTPCARQVGAPRHER*SGTAAK Trigger: TTTGGCAGCTGTACCTGACCACCGTTCATGGCGCGG...GGCACCCACCTGTCGAGCGCAGGGAGTCCTGCTGCTTTTGTGTTTATTTCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGAACCCAGAGCACTCTCCCCCTCTTACTTTAGGCGCTGTTTCGAGCCTCCTCATGGGCTTGCTTaGAGAAATCCAATTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVEPRALSPSYFRRCFEPPHGLA*RNPISG Trigger: GCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGG...AGGCTCGAAACAGCGCCTAAAGTAAGAGGGGGAGAGTGCTCTGGGTTCCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCGCTCCAACCAAGTaGGCAACTCAGACACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLCSSVSWGSPTTFDFLWSAPTK*ATQTPG Trigger: ACCAGGTGTCTGAGTTGCGCACTTGGTTGGAGCGCT...CCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCACAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCCCACCCTCATGGGCTTaGTTGAAGAAATCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAVSSLSAIQSRPVVKPPPSWA*LKKSNF Trigger: GAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGG...GGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCAATGCTCCTGAGAGCAAGCCAAAAACGTACAAAAGGGAGTCACTATAGCGGGCCACGGCCTCCCTaGTACATGATGGTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TAMLLRASQKRTKGSHYSGPRPP*YMMVPL Trigger: GAGTGGCACCATCATGTACCAGGGAGGCCGTGGCCC...GCTATAGTGACTCCCTTTTGTACGTTTTTGGCTTGCTCTCAGGAGCATTGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | GCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGTGCGTAGTCGAGGATaGGCTGGCTCTGGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHLCHGDPPQPLTFFGAFVRSRG*AGSGSH Trigger: ATGGCTTCCAGAGCCAGCGCATCCTCGACTACGCAC...AAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| 3UTR CAA 72 bp | TGTGCTCATCTGTGTCATGGGGATCCCCCACAACCTTaGACTTTCTTTGGAGCATTTGCACGTGGGCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CAHLCHGDPPQP*TFFGAFARGLR Trigger: TCGAAGCCCACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | GCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTTGGTGCCACTCTGGATaGCGTAGAGGCGCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHLCHGDPPQPLTFFGAFWCHSG*RRGAQN Trigger: ATTTTGAGCGCCTCTACGTCATCCAGAGTGGCACCA...AAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR GCA 90 bp | GTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGACGGTTCCCTGTGGAGGAAATGCTTGCGGATaGACAAGAAATCTAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHPLPCPSSTPFSTVPCGGNACG*TRNLKA Trigger: GGCTTTTAGATTTCTTGTGCATCCGCAAGCATTTCC...TCCACAGGGAACCGTCGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCAAGTTCTTCCCCTTCTCCTTGTCTTAGAACTAATCCCTTCTCCAAAAAGCTAAAAGCCAGAGCATaGAGGCCGTGCCTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSSPSPCLRTNPFSKKLKARA*RPCLGS Trigger: GCTTCCTAGGCACGGCCTTCATGCTCTGGCTTTTAG...CTTTTTGGAGAAGGGATTAGTTCTAAGACAAGGAGAAGGGGAAGAACTTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | AACCCAGCTGCGCTCAGGGCGCGCGGGCGTGGCCAACAAGTCCGAGCTGTGAAACCATGCCACACGGCTTaGAGAGAGGCCAGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NPAALRARGRGQQVRAVKPCHTA*REARVH Trigger: GTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGG...TTTCACAGCTCGGACTTGTTGGCCACGCCCGCGCGCCCTGAGCGCAGCTGGGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS TCA 90 bp | CGCATATGGGCGGGTCGTCAGGGGGCATCTCCTCGCCTTCACTGTTaGGCTCTACTTCGGGCTCAGGGTGGTCAGGATGGCGACGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RIWAGRQGASPRLHC*ALLRAQGGQDGDGA Trigger: TGCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGAGATGCCCCCTGACGACCCGCCCATATGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 90 bp | CTTGGTGACCAGGCGCTGGAAGGCGCTCATCCGCGCCATGAACGGTaGTCAGGTACAGCTGCCAAAATTGAGCACCAACGGGCGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGDQALEGAHPRHER*SGTAAKIEHQRAGP Trigger: GGGACCCGCCCGTTGGTGCTCAATTTTGGCAGCTGTACCTGACCACCGTTCATGGCGCGGATGAGCGCCTTCCAGCGCCTGGTCACCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS TCA 90 bp | CCACACGGCTTTGAGAGAGGCCAGGGTGCACAGACGGTTGTCGTCTaGTACGCATATGGGCGGGTCGTCAGGGGGCATCTCCTCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PHGFERGQGAQTVVV*YAYGRVVRGHLLAF Trigger: GAAGGCGAGGAGATGCCCCCTGACGACCCGCCCATATGCGTATCAGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CAA 90 bp | AGCGCACCCAAAGCTAGGCGGGGAAATTACCCTGCCCACCCTTTCCCTATCTCGACGTCGCGCTGGTACTaGGTGACCAGGCGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAPKARRGNYPAHPFPISTSRWY*VTRRWK Trigger: CTTCCAGCGCCTGGTCACCAAGTACCAGCGCGACGT...CGAGATAGGGAAAGGGTGGGCAGGGTAATTTCCCCGCCTAGCTTTGGGTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS GCA 90 bp | TCAGGTACAGCTGCCAAAATTGAGCACCAACGGGCGGGTCCCTTGTaGGTAGTCGAGGATGCGCTGGCTCTGGAAGCCATCAGGTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGTAAKIEHQRAGPL*VVEDALALEAIRSD Trigger: GTCCGACCTGATGGCTTCCAGAGCCAGCGCATCCTCGACTACGCACAAGGGACCCGCCCGTTGGTGCTCAATTTTGGCAGCTGTACCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 90 bp | GGCATCTCCTCGCCTTCACTGTTGAGCTCTACTTCGGGCTCAGGGTaGTCAGGATGGCGACGGCGCAGGAAATGCTTGCGGATGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GISSPSLLSSTSGSG*SGWRRRRKCLRMHK Trigger: CTTGTGCATCCGCAAGCATTTCCTGCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGAGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 90 bp | GGCGCTGGGCCACCCTCATGGGCTTGCTTGAAGAAATCCAATTTCTaGCCATGCCACACGGCTTTGAGAGAGGCCAGGGTGCACAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGPPSWACLKKSNF*PCHTALREARVHRR Trigger: CCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS CCA 90 bp | CCATCAGGTCGGACAACCTCCGAGTTGGGCGCTGGGCCACCCTCATaGGCTTGCTTGAAGAAATCCAATTTCTGGCCATGCCACACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSGRTTSELGAGPPS*ACLKKSNFWPCHTA Trigger: AGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCTGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 90 bp | CTGGCTCTGGAAGCCATCAGGTCGGACAACCTCCGAGTTGGGCGCTaGGCCACCCTCATGGGCTTGCTTGAAGAAATCCAATTTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LALEAIRSDNLRVGR*ATLMGLLEEIQFLA Trigger: GGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCTGATGGCTTCCAGAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 90 bp | ATGATAAGGAAGTCAACGTCGCGCTGGTACTTGGTGACCAGGCGCTaGAAGGCGCTCATCCGCGCCATGAACGGTGGTCAGGTACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MIRKSTSRWYLVTRR*KALIRAMNGGQVQL Trigger: CAGCTGTACCTGACCACCGTTCATGGCGCGGATGAGCGCCTTCCAGCGCCTGGTCACCAAGTACCAGCGCGACGTTGACTTCCTTATCAT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CAA 90 bp | GCGCTGTTTCGAGCCTCTCTGCAATTCAGAGCCGACCCGTGGTCAAGCCCAGTTGTACAGCTGCCAAAATaGAGCACCAACGGGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALFRASLQFRADPWSSPVVQLPK*STNGRV Trigger: GACCCGCCCGTTGGTGCTCAATTTTGGCAGCTGTAC...AACTGGGCTTGACCACGGGTCGGCTCTGAATTGCAGAGAGGCTCGAAACAGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 90 bp | GGGCCACCCTCATGGGCTTGCTTGAAGAAATCCAATTTCTGGCCATaGCACACGGCTTTGAGAGAGGCCAGGGTGCACAGACGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPPSWACLKKSNFWP*HTALREARVHRRLS Trigger: CGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS-3UTR CAA 90 bp | TTTGCACGTGGGCTTCGAAGGCCCAGGAGACCCGGCCCACCAATTCAGTCACTTTCCTCGCCTTCACTGTaGAGCTCTACTTCGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FARGLRRPRRPGPPIQSLSSPSL*SSTSGS Trigger: TGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGA...AAGTGACTGAATTGGTGGGCCGGGTCTCCTGGGCCTTCGAAGCCCACGTGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS TCA 90 bp | GCAGGAAATGCTTGCGGATGCACAAGAAATCTAAAAGCCAGAGCATaGAGGCCGTGCCTAGGAAGCGCGGGAACAGCACGAGGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGNACGCTRNLKARA*RPCLGSAGTARGTR Trigger: CCTCGTGCCTCGTGCTGTTCCCGCGCTTCCTAGGCACGGCCTTCATGCTCTGGCTTTTAGATTTCTTGTGCATCCGCAAGCATTTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | GGAGTCACTATAGCAGAGTCTCAAGTTAGCCAGACTCAGCCTGAGTTCTGTGGCACGTCGCGCTGGTACTaGGTGACCAGGCGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTIAESQVSQTQPEFCGTSRWY*VTRRWK Trigger: CTTCCAGCGCCTGGTCACCAAGTACCAGCGCGACGT...GCCACAGAACTCAGGCTGAGTCTGGCTAACTTGAGACTCTGCTATAGTGACTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCACGTCAACGGGCGGGTCCCTaGTGCGTAGTCGAGGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LCHGDPPQPLTFFGAFARQRAGP*CVVEDA Trigger: CGCATCCTCGACTACGCACAAGGGACCCGCCCGTTG...ACGTGCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS GCA 90 bp | GGTGCCACTCTGGATGACGTAGAGGCGCTCAAAATAGGCACCATATaGGGAACTGCTAGAGTTGGCCATAGTGTCCAGGACCAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GATLDDVEALKIGTI*GTARVGHSVQDQST Trigger: TGTGCTCTGGTCCTGGACACTATGGCCAACTCTAGCAGTTCCGCATATGGTGCCTATTTTGAGCGCCTCTACGTCATCCAGAGTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
||
| CDS CCA 90 bp | TCGCCTTCACTGTTGAGCTCTACTTCGGGCTCAGGGTGGTCAGGATaGCGACGGCGCAGGAAATGCTTGCGGATGCACAAGAAATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLLSSTSGSGWSG*RRRRKCLRMHKKSK Trigger: TTTAGATTTCTTGTGCATCCGCAAGCATTTCCTGCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | GCTCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTAGGGTGCACAGACGGTaGTCGTCTGATACGCATATG | + |
|
Preference number: 5 (lower is better) Translates to: AHLCHGDPPQPLTFFGAFRVHRR*SSDTHM Trigger: CATATGCGTATCAGACGACAACCGTCTGTGCACCCT...AAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTGGTCTCGAAGTCCATCCCTTACCATGTCCCTCTTCCACCCCTTTTTCGCCCTCATGGGCTTGCTaGAAGAAATCCAATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFGLEVHPLPCPSSTPFSPSWAC*KKSNFW Trigger: CCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGG...CGAAAAAGGGGTGGAAGAGGGACATGGTAAGGGATGGACTTCGAGACCAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS-3UTR CAA 90 bp | TCATCTGTGTCATGGGGATCCCCCACAACCTTTGACTTTCTTTGGAGCATTTGCGCCACCCTCATGGGCTaGCTTGAAGAAATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SSVSWGSPTTFDFLWSICATLMG*LEEIQF Trigger: AAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGC...GCAAATGCTCCAAAGAAAGTCAAAGGTTGTGGGGGATCCCCATGACACAGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS CAA 90 bp | ACGCATATGGGCGGGTCGTCAGGGGGCATCTCCTCGCCTTCACTGTaGAGCTCTACTTCGGGCTCAGGGTGGTCAGGATGGCGACGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: THMGGSSGGISSPSL*SSTSGSGWSGWRRR Trigger: GCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGAGATGCCCCCTGACGACCCGCCCATATGCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
||
| CDS TCA 72 bp | GCGGGTCGTCAGGGGGCATCTCCTCGCCTTCACTGTTaGGCTCTACTTCGGGCTCAGGGTGGTCAGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRQGASPRLHC*ALLRAQGGQDG Trigger: GCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGAGATGCCCCCTGACGACCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | GCACCAACGGGCGGGTCCCTTGTGCGTAGTCGAGGATaGGCTGGCTCTGGAAGCCATCAGGTCGGACAACCT | + |
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Preference number: 6 (lower is better) Translates to: APTGGSLVRSRG*AGSGSHQVGQP Trigger: AGGTTGTCCGACCTGATGGCTTCCAGAGCCAGCGCATCCTCGACTACGCACAAGGGACCCGCCCGTTGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | GGCGGGTCGTCAGGGGGCATCTCCTCGCCTTCACTGTaGAGCTCTACTTCGGGCTCAGGGTGGTCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: GGSSGGISSPSL*SSTSGSGWSGW Trigger: CCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGAGGAGATGCCCCCTGACGACCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 90 bp | TGGCCATGCCACACGGCTTTGAGAGAGGCCAGGGTGCACAGACGGTaGTCGTCTGATACGCATATGGGCGGGTCGTCAGGGGGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: WPCHTALREARVHRR*SSDTHMGGSSGGIS Trigger: GGAGATGCCCCCTGACGACCCGCCCATATGCGTATCAGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | CCAGGGTGCACAGACGGTTGTCGTCTGATACGCATATaGGCGGGTCGTCAGGGGGCATCTCCTCGCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PGCTDGCRLIRI*AGRQGASPRLH Trigger: GTGAAGGCGAGGAGATGCCCCCTGACGACCCGCCCATATGCGTATCAGACGACAACCGTCTGTGCACCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | AAGTCAACGTCGCGCTGGTACTTGGTGACCAGGCGCTaGAAGGCGCTCATCCGCGCCATGAACGGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KSTSRWYLVTRR*KALIRAMNGGQ Trigger: CTGACCACCGTTCATGGCGCGGATGAGCGCCTTCCAGCGCCTGGTCACCAAGTACCAGCGCGACGTTGACTT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | TGGCTCTGGAAGCCATCAGGTCGGACAACCTCCGAGTaGGGCGCTGGGCCACCCTCATGGGCTTGCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: WLWKPSGRTTSE*GAGPPSWACLK Trigger: CTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCTGATGGCTTCCAGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | GCTGCCAAAATTGAGCACCAACGGGCGGGTCCCTTGTaGGTAGTCGAGGATGCGCTGGCTCTGGAAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: AAKIEHQRAGPL*VVEDALALEAI Trigger: GATGGCTTCCAGAGCCAGCGCATCCTCGACTACGCACAAGGGACCCGCCCGTTGGTGCTCAATTTTGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | TCGCCTTCACTGTTGAGCTCTACTTCGGGCTCAGGGTaGTCAGGATGGCGACGGCGCAGGAAATGCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SPSLLSSTSGSG*SGWRRRRKCLR Trigger: CCGCAAGCATTTCCTGCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAGTGAAGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | CAGGCGCTGGAAGGCGCTCATCCGCGCCATGAACGGTaGTCAGGTACAGCTGCCAAAATTGAGCACCAACGG | + |
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Preference number: 6 (lower is better) Translates to: QALEGAHPRHER*SGTAAKIEHQR Trigger: CCGTTGGTGCTCAATTTTGGCAGCTGTACCTGACCACCGTTCATGGCGCGGATGAGCGCCTTCCAGCGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | CACACGGCTTTGAGAGAGGCCAGGGTGCACAGACGGTaGTCGTCTGATACGCATATGGGCGGGTCGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HTALREARVHRR*SSDTHMGGSSG Trigger: CCCTGACGACCCGCCCATATGCGTATCAGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | ACAGCTGCCAAAATTGAGCACCAACGGGCGGGTCCCTaGTGCGTAGTCGAGGATGCGCTGGCTCTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAAKIEHQRAGP*CVVEDALALEA Trigger: GGCTTCCAGAGCCAGCGCATCCTCGACTACGCACAAGGGACCCGCCCGTTGGTGCTCAATTTTGGCAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS TCA 72 bp | TTTGAGAGAGGCCAGGGTGCACAGACGGTTGTCGTCTaGTACGCATATGGGCGGGTCGTCAGGGGGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: FERGQGAQTVVV*YAYGRVVRGHL Trigger: GAGATGCCCCCTGACGACCCGCCCATATGCGTATCAGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | CTGTTGAGCTCTACTTCGGGCTCAGGGTGGTCAGGATaGCGACGGCGCAGGAAATGCTTGCGGATGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: LLSSTSGSGWSG*RRRRKCLRMHK Trigger: CTTGTGCATCCGCAAGCATTTCCTGCGCCGTCGCCATCCTGACCACCCTGAGCCCGAAGTAGAGCTCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 90 bp | AGGATGCGCTGGCTCTGGAAGCCATCAGGTCGGACAACCTCCGAGTaGGGCGCTGGGCCACCCTCATGGGCTTGCTTGAAGAAATCCAAT | + |
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Preference number: 6 (lower is better) Translates to: RMRWLWKPSGRTTSE*GAGPPSWACLKKSN Trigger: ATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCTGATGGCTTCCAGAGCCAGCGCATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 90 bp | AGGTCGGACAACCTCCGAGTTGGGCGCTGGGCCACCCTCATGGGCTaGCTTGAAGAAATCCAATTTCTGGCCATGCCACACGGCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSDNLRVGRWATLMG*LEEIQFLAMPHGFE Trigger: CTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS TCA 72 bp | CCGAGTTGGGCGCTGGGCCACCCTCATGGGCTTGCTTaGAGAAATCCAATTTCTGGCCATGCCACACGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PSWALGHPHGLA*RNPISGHATRL Trigger: AAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | ACCTCCGAGTTGGGCGCTGGGCCACCCTCATGGGCTTaGTTGAAGAAATCCAATTTCTGGCCATGCCACACG | + |
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Preference number: 6 (lower is better) Translates to: TSELGAGPPSWA*LKKSNFWPCHT Trigger: CGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CCA 72 bp | GAAGCCATCAGGTCGGACAACCTCCGAGTTGGGCGCTaGGCCACCCTCATGGGCTTGCTTGAAGAAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: EAIRSDNLRVGR*ATLMGLLEEIQ Trigger: TTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTTGTCCGACCTGATGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | GGCTCAGGGTGGTCAGGATGGCGACGGCGCAGGAAATaGTTGCGGATGCACAAGAAATCTAAAAGCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSGWSGWRRRRK*LRMHKKSKSQS Trigger: GCTCTGGCTTTTAGATTTCTTGTGCATCCGCAAGCATTTCCTGCGCCGTCGCCATCCTGACCACCCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | AACCTCCGAGTTGGGCGCTGGGCCACCCTCATGGGCTaGCTTGAAGAAATCCAATTTCTGGCCATGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: NLRVGRWATLMG*LEEIQFLAMPH Trigger: GTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGGCCCAGCGCCCAACTCGGAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | TACCATGCAACTGTTCATCATAGCGCTCCAACCAAGTaGGCAACTCAGACACCTGGTAACCGTCGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: YHATVHHSAPTK*ATQTPGNRRGH Trigger: GTGGCCCCGACGGTTACCAGGTGTCTGAGTTGCGCACTTGGTTGGAGCGCTATGATGAACAGTTGCATGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS CCA 72 bp | CCACCCTCATGGGCTTGCTTGAAGAAATCCAATTTCTaGCCATGCCACACGGCTTTGAGAGAGGCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPSWACLKKSNF*PCHTALREARV Trigger: CACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGAGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 90 bp | TGGGCTTGCTTGAAGAAATCCAATTTCTGGCCATGCCACACGGCTTaGAGAGAGGCCAGGGTGCACAGACGGTTGTCGTCTGATACGCAT | + |
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Preference number: 6 (lower is better) Translates to: WACLKKSNFWPCHTA*REARVHRRLSSDTH Trigger: ATGCGTATCAGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS GCA 72 bp | CTGGATGACGTAGAGGCGCTCAAAATAGGCACCATATaGGGAACTGCTAGAGTTGGCCATAGTGTCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LDDVEALKIGTI*GTARVGHSVQD Trigger: GTCCTGGACACTATGGCCAACTCTAGCAGTTCCGCATATGGTGCCTATTTTGAGCGCCTCTACGTCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097228.5 ENSMUST00000173014.3 |
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| CDS GCA 72 bp | TCATGGGCTTGCTTGAAGAAATCCAATTTCTGGCCATaGCACACGGCTTTGAGAGAGGCCAGGGTGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SWACLKKSNFWP*HTALREARVHR Trigger: TCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAAGCAAGCCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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| CDS CAA 72 bp | TTGAAGAAATCCAATTTCTGGCCATGCCACACGGCTTaGAGAGAGGCCAGGGTGCACAGACGGTTGTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: LKKSNFWPCHTA*REARVHRRLSS Trigger: AGACGACAACCGTCTGTGCACCCTGGCCTCTCTCAAAGCCGTGTGGCATGGCCAGAAATTGGATTTCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173014.3 |
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