Pregenerated sensors for DIO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007682Ensembl transcript IDs: ENSMUST00000082432.6
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCGACCGAGAAGCAGAGATGGACACACGTGTTCTCAGTCGCACTaGCTCAGGACTCCTTGCACCATGACCCAAATGTTCCTCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LRPRSRDGHTCSQSH*LRTPCTMTQMFLLA Trigger: AGCAAGGAGGAACATTTGGGTCATGGTGCAAGGAGTCCTGAGCCAGTGCGACTGAGAACACGTGTGTCCATCTCTGCTTCTCGGTCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CCA 90 bp | TCTGACAAGCGGAAGCGCTGGCCTAAGTCTTCCTTTATCCTTCAGTaGGACAGAAATCAGCCTAATTTTCCTCTCCGCAGTGGCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SDKRKRWPKSSFILQ*DRNQPNFPLRSGQG Trigger: CCCTTGGCCACTGCGGAGAGGAAAATTAGGCTGATTTCTGTCCCACTGAAGGATAAAGGAAGACTTAGGCCAGCGCTTCCGCTTGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR TCA 90 bp | GACAGCTCTTTCGTCAGTAGTTATCATTCGCACACCAGTGAGCTCTaGACATCTCCGTTTCCTCTTTCCGGTGCTGGTTACATGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: DSSFVSSYHSHTSEL*TSPFPLSGAGYMGW Trigger: CCAGCCCATGTAACCAGCACCGGAAAGAGGAAACGGAGATGTTCAGAGCTCACTGGTGTGCGAATGATAACTACTGACGAAAGAGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CCA 90 bp | GCCCGAGACAGGCAGCAAGCCCTGGCTTGCGTGAGCAGTCTTGTTTaGATATCTGTATGTGTTTGCTTTTTGCTGGTTCAGACTCACCTT | + |
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Preference number: 1 (lower is better) Translates to: ARDRQQALACVSSLV*ISVCVCFLLVQTHL Trigger: AAGGTGAGTCTGAACCAGCAAAAAGCAAACACATACAGATATCCAAACAAGACTGCTCACGCAAGCCAGGGCTTGCTGCCTGTCTCGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CCA 90 bp | CGATTTCCTCATCTTTCTGCTTCCTCTGTCTTTGCTTGTCACACTTaGGAATTCGGGGCTACAGAGACTAACCGGGACATTGCATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RFPHLSASSVFACHT*EFGATETNRDIAWL Trigger: CAGCCATGCAATGTCCCGGTTAGTCTCTGTAGCCCCGAATTCCCAAGTGTGACAAGCAAAGACAGAGGAAGCAGAAAGATGAGGAAATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR GCA 90 bp | AGGGTTTTTCTTCCAGTGTTTTGGACATGCTCTATTGAACACGTCTaGGTCCCTGACAGTCAGCCTAGATCTTTGTATAGTTGCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RVFLPVFWTCSIEHV*VPDSQPRSLYSCFL Trigger: GAGGAAGCAACTATACAAAGATCTAGGCTGACTGTCAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAAACACTGGAAGAAAAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CCA 90 bp | TTGGATATCTGTATGTGTTTGCTTTTTGCTGGTTCAGACTCACCTTaGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGTCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LDICMCLLFAGSDSP*NRAESVKSETLCLV Trigger: CACCAGACACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAGCAAAAAGCAAACACATACAGATATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CCA 90 bp | ATCATAGGTAGTAGCTCCCTTAACAATAAGTATTCTGAGAACTTATaGTCCTCTGGTCCCAGAGCACACGCAGGACAGAATCACTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: IIGSSSLNNKYSENL*SSGPRAHAGQNHFF Trigger: AAAGAAGTGATTCTGTCCTGCGTGTGCTCTGGGACCAGAGGACCATAAGTTCTCAGAATACTTATTGTTAAGGGAGCTACTACCTATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR GCA 90 bp | TCCCATAAAGTACTTCTCTCCACATTAAAAACGTTCACCTATCTTTaGCATCGCCCACTTCCTTTCAGTGTAGGAATATTGCTACACATC | + |
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Preference number: 1 (lower is better) Translates to: SHKVLLSTLKTFTYL*HRPLPFSVGILLHI Trigger: GATGTGTAGCAATATTCCTACACTGAAAGGAAGTGGGCGATGGCAAAGATAGGTGAACGTTTTTAATGTGGAGAGAAGTACTTTATGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTGAACTTATGGTCCTCTaGTCCCAGAGCACACGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPELMVL*SQSTRR Trigger: CCTGCGTGTGCTCTGGGACCAGAGGACCATAAGTTC...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGGAACCTACAGGGCATaGCAAGGGCAGCTTGTATCC | + |
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Preference number: 2 (lower is better) Translates to: LVQTHLGTELSLLSLRPCGTYRA*QGQLVS Trigger: GGATACAAGCTGCCCTTGGCATGCCCTGTAGGTTCC...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTAGAACCACCAATGGCTaGTTTGCCTCCACAGACATC | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPRTTNG*FASTDI Trigger: GATGTCTGTGGAGGCAAACCAGCCATTGGTGGTTCT...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTGAAGATGAAGATGAGTaGGGGATCGCTCATAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPEDEDE*GIAHKP Trigger: AGGCTTATGAGCGATCCCTCACTCATCTTCATCTTC...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACCCCCACCCACTCTCTaGCTTTCTGCTTCGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTPPPTL*LSASLS Trigger: TGATAGCGAAGCAGAAAGTCAGAGAGTGGGTGGGGG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGCATTGAACATGTTCTaGCAAGCGGAAGCGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTALNMF*QAEALA Trigger: GGCCAGCGCTTCCGCTTGTCAGAACATGTTCAATGC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTACGACGGTGTGGGTGTaGGGCAGCCAATTTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: LVQTHLGTELSLLSLRPCTTVWV*GSQFSI Trigger: AATGGAAAATTGGCTGCCCCACACCCACACCGTCGT...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTCTCCAAAAGGCAAATaGTACACGCACACAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPSPKGK*YTHTTF Trigger: GAAGGTTGTGTGCGTGTACCATTTGCCTTTTGGAGA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTGTGTCTACATTTGCTaGGCAGGCTCTACATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPCVYIC*AGSTFK Trigger: CTTGAATGTAGAGCCTGCCCAGCAAATGTAGACACA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CAA 90 bp | AGCCCTGGCTTGCGTGAGCAGTCTTGTTTGGATATCTGTATGTGTTaGCTTTTTGCTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SPGLREQSCLDICMC*LFAGSDSPWNRAES Trigger: AGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAGCAAAAAGCAAACACATACAGATATCCAAACAAGACTGCTCACGCAAGCCAGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGGAGAAGGCAGAAACTaGATGGTTAGTGTACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTGEGRN*MVSVPA Trigger: GGCAGGTACACTAACCATTCAGTTTCTGCCTTCTCC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CAA 90 bp | TGGGCCCTTCAAGGGTTTTTCTTCCAGTGTTTTGGACATGCTCTATaGAACACGTCTGCGTCCCTGACAGTCAGCCTAGATCTTTGTATA | + |
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Preference number: 2 (lower is better) Translates to: WALQGFFFQCFGHAL*NTSASLTVSLDLCI Trigger: TATACAAAGATCTAGGCTGACTGTCAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAAACACTGGAAGAAAAACCCTTGAAGGGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTCCAGTGTTTTGGACATaGTCTATTGAACACGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LVQTHLGTELSLLSLRPCPVFWT*SIEHVC Trigger: GCAGACGTGTTCAATAGAGCATGTCCAAAACACTGG...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTCTTCGCTATCACACGTaGAAACCAAAGGGGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: LVQTHLGTELSLLSLRPCLRYHT*KPKGSF Trigger: AAATGACCCCTTTGGTTTCCACGTGTGATAGCGAAG...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTCTTTATGCCCATTCTaGAAGTCCATAAAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPSLCPF*KSIKRA Trigger: TGCTCTTTTTATGGACTTTCAGAATGGGCATAAAGA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTTGCTTCCTCTGTCTTTaGTTGTCACACTTGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: LVQTHLGTELSLLSLRPCCFLCL*LSHLGI Trigger: AATTCCCAAGTGTGACAAGCAAAGACAGAGGAAGCA...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAAGTGTGTCTACATTTaGTGGGCAGGCTCTACATTC | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTKCVYI*WAGSTF Trigger: GAATGTAGAGCCTGCCCAGCAAATGTAGACACACTT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATCTTCCTTCCTCCATTaGCCTATTCTCCAAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTSSFLH*PILQKA Trigger: TGCCTTTTGGAGAATAGGCCAATGGAGGAAGGAAGA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTTTCTTCCAGTGTTTTaGACATGCTCTATTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPFLPVF*TCSIEH Trigger: GTGTTCAATAGAGCATGTCCAAAACACTGGAAGAAA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CAA 90 bp | CGCCTTTGTTTTCCCAGCTGTGTACATGCCTCAATGCTGATGCTGTaGAACAACACTCATTACCTACAGCTTCCAGGTAAAAACACTATG | + |
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Preference number: 2 (lower is better) Translates to: RLCFPSCVHASMLML*NNTHYLQLPGKNTM Trigger: CATAGTGTTTTTACCTGGAAGCTGTAGGTAATGAGTGTTGTTCAACAGCATCAGCATTGAGGCATGTACACAGCTGGGAAAACAAAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATGGGTTTGTTTCTGGTaGCTAAAGCTGAGACAATAC | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTWVCFW*LKLRQY Trigger: GTATTGTCTCAGCTTTAGTCACCAGAAACAAACCCA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATATGGGTTAGCGATCTaGCTTATTTCTTGCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTYGLAI*LISCSH Trigger: ATGGGAGCAAGAAATAAGTCAGATCGCTAACCCATA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATCCACAGACATCCACTaGATTTGTACAAAGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTSTDIH*ICTKCV Trigger: GACACACTTTGTACAAATTCAGTGGATGTCTGTGGA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATGCAACAGGGTTTCTTaGACTCCAGTTTGGATCAAT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTCNRVS*TPVWIN Trigger: ATTGATCCAAACTGGAGTGCAAGAAACCCTGTTGCA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAGAATGAATACAGGCTaGAACAGGGTTTCTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTRMNTG*NRVSCT Trigger: AGTGCAAGAAACCCTGTTGCAGCCTGTATTCATTCT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAAGGCAGAAACTGAATaGTTAGTGTACCTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTKAETE*LVYLPL Trigger: AAGAGGCAGGTACACTAACCATTCAGTTTCTGCCTT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTATATCTAAATATACTTaGGTTCTGGTTTGGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GTNSFQLATFPAHAAADPISKYT*VLVWSH Trigger: ATGGCTCCAAACCAGAACCCAAGTATATTTAGATAT...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATATGTGTTTGCTTTTTaGTGGTTCAGACTCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTYVFAF*WFRLTL Trigger: CAAGGTGAGTCTGAACCAGCAAAAAGCAAACACATA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACACTGTGTTTCCTTGTaGGTGTGTCTTTTACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTHCVSL*VCLLQN Trigger: ATTCTGTAAAAGACACACCCACAAGGAAACACAGTG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGACACTGTTGCATTTTaGGAATTCACTGTGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTDTVAF*EFTVFP Trigger: AGGAAACACAGTGAATTCCCAAAATGCAACAGTGTC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAGATCTTTGTATAGTTaGTTCCTCTTCTTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: IQPQTEQTALSSVVIIRTRSLYS*FLFFLP Trigger: AGGAAGGAAGAAGAGGAAGCAACTATACAAAGATCT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATAACCGGGACATTGCATaGCTGGAACTAACACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLWMSDFLLILQKARRRNNRDIA*LELTLQ Trigger: CTGAAGTGTTAGTTCCAGCCATGCAATGTCCCGGTT...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTTTGCTTGTCACACTTaGGAATTCGGGGCTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: HLWMSDFLLILQKARRRNFACHT*EFGATE Trigger: CTCTGTAGCCCCGAATTCCCAAGTGTGACAAGCAAA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR CAA 90 bp | AGTGTGTCTACATTTGCTGGGCAGGCTCTACATTCAAGGAAGTCATaGTCCAGGTTACTTCCTCTAATCAACAAACTAAAGAGAGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SVSTFAGQALHSRKS*SRLLPLINKLKRVL Trigger: CAAAACTCTCTTTAGTTTGTTGATTAGAGGAAGTAACCTGGACAATGACTTCCTTGAATGTAGAGCCTGCCCAGCAAATGTAGACACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTCCTAACTGCATGGCATaGCTTCAAGATCACATCGTA | + |
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Preference number: 2 (lower is better) Translates to: ERNLYVLRKVTARDVCVCPNCMA*LQDHIV Trigger: TACGATGTGATCTTGAAGCCATGCCATGCAGTTAGG...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTTTACAGTTCTTTTACTaGAGGAGAAGGCAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: ERNLYVLRKVTARDVCVCLQFFY*RRRQKL Trigger: CAGTTTCTGCCTTCTCCTCCAGTAAAAGAACTGTAA...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTTACAATACATTGGTTaGTCTGTTGGTGTGTTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HLWMSDFLLILQKARRRNLQYIG*SVGVFW Trigger: CCAAAACACACCAACAGATCAACCAATGTATTGTAA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTCTTTCGGTGAGGCAATaGGATTCAGTTGAAATAATA | + |
|
Preference number: 2 (lower is better) Translates to: ERNLYVLRKVTARDVCVCLSVRQ*DSVEII Trigger: TATTATTTCAACTGAATCCCATTGCCTCACCGAAAG...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTTCATTAGACACTGTTaGATTTTGGGAATTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLWMSDFLLILQKARRRNFIRHC*ILGIHC Trigger: ACAGTGAATTCCCAAAATGCAACAGTGTCTAATGAA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 90 bp | ATCTTCAATATGATTCTACAGAAGTTCATTAGACACTGTTGCATTTaGGGAATTCACTGTGTTTCCTTGTGGGTGTGTCTTTTACAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: IFNMILQKFIRHCCI*GIHCVSLWVCLLQN Trigger: ATTCTGTAAAAGACACACCCACAAGGAAACACAGTGAATTCCCAAAATGCAACAGTGTCTAATGAACTTCTGTAGAATCATATTGAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | CACACGTGTTCTCAGTCGCACTGGCTCAGGACTCCTTaGACCATGACCCAAATGTTCCTCCTTGCTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HTCSQSHWLRTP*TMTQMFLLAKE Trigger: CTCCTTAGCAAGGAGGAACATTTGGGTCATGGTGCAAGGAGTCCTGAGCCAGTGCGACTGAGAACACGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTTTCCCCTCCAGTAGTTaGTGTGAGGCAGCCCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LVQTHLGTELSLLSLRPCFPSSS*CEAAPT Trigger: GGTGGGGGCTGCCTCACACAAACTACTGGAGGGGAA...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | GTTCTCAGTCGCACTGGCTCAGGACTCCTTGCACCATaGCCCAAATGTTCCTCCTTGCTAAGGAGACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLSRTGSGLLAP*PKCSSLLRRQR Trigger: TCTCTGTCTCCTTAGCAAGGAGGAACATTTGGGTCATGGTGCAAGGAGTCCTGAGCCAGTGCGACTGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | AGAAGCAGAGATGGACACACGTGTTCTCAGTCGCACTaGCTCAGGACTCCTTGCACCATGACCCAAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSRDGHTCSQSH*LRTPCTMTQMF Trigger: GAACATTTGGGTCATGGTGCAAGGAGTCCTGAGCCAGTGCGACTGAGAACACGTGTGTCCATCTCTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTGGGGGACTTTCCAGTaGGGTTTGTTTCTGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GTNSFQLATFPAHAAADPWGTFQ*GLFLVT Trigger: AGTCACCAGAAACAAACCCAACTGGAAAGTCCCCCA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGCAGCAAGCCCTGGCTaGCGTGAGCAGTCTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTAASPG*REQSCL Trigger: CAAACAAGACTGCTCACGCAAGCCAGGGCTTGCTGC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | AATGGAGCTGGGTGTAGCATTGTGACTGTAGGAATTTaGCAGGAACAACACATCAGCACCAGACCCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NGAGCSIVTVGI*QEQHISTRPPG Trigger: TCCAGGGGGTCTGGTGCTGATGTGTTGTTCCTGCCAAATTCCTACAGTCACAATGCTACACCCAGCTCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | GGCCCTTCAAGGGTTTTTCTTCCAGTGTTTTGGACATaGTCTATTGAACACGTCTGCGTCCCTGACAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GPSRVFLPVFWT*SIEHVCVPDSQ Trigger: CTGACTGTCAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAAACACTGGAAGAAAAACCCTTGAAGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | CGGAAGCGCTGGCCTAAGTCTTCCTTTATCCTTCAGTaGGACAGAAATCAGCCTAATTTTCCTCTCCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RKRWPKSSFILQ*DRNQPNFPLRS Trigger: ACTGCGGAGAGGAAAATTAGGCTGATTTCTGTCCCACTGAAGGATAAAGGAAGACTTAGGCCAGCGCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | CACGCAGGACAGAATCACTTCTTTCGCAAGCAAGAATaGATACAGGCTGCAACAGGGTTTCTTGCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HAGQNHFFRKQE*IQAATGFLALQ Trigger: CTGGAGTGCAAGAAACCCTGTTGCAGCCTGTATTCATTCTTGCTTGCGAAAGAAGTGATTCTGTCCTGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | AGTACTAGGTACATAGGTCTTCTCACCCCCGACTCCTaGCACATCAAAATCACATGGCATACTCTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: STRYIGLLTPDS*HIKITWHTLEQ Trigger: CTGCTCCAGAGTATGCCATGTGATTTTGATGTGTCAGGAGTCGGGGGTGAGAAGACCTATGTACCTAGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | TTCGTCAGTAGTTATCATTCGCACACCAGTGAGCTCTaGACATCTCCGTTTCCTCTTTCCGGTGCTGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FVSSYHSHTSEL*TSPFPLSGAGY Trigger: GTAACCAGCACCGGAAAGAGGAAACGGAGATGTTCAGAGCTCACTGGTGTGCGAATGATAACTACTGACGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTATTCACTGTGTTTCCTaGTGGGTGTGTCTTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: GTNSFQLATFPAHAAADPIHCVS*WVCLLQ Trigger: CTGTAAAAGACACACCCACAAGGAAACACAGTGAAT...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATTTGGACATGCTCTATaGAACACGTCTGCGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTFGHAL*NTSASL Trigger: CAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | CAAGCAAGAATGAATACAGGCTGCAACAGGGTTTCTTaGACTCCAGTTTGGATCAATTCGCTCAGAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QARMNTGCNRVS*TPVWINSLRRE Trigger: CTCCCTTCTGAGCGAATTGATCCAAACTGGAGTGCAAGAAACCCTGTTGCAGCCTGTATTCATTCTTGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | TTTCTACTAATAATCCCCAAAGCTTCTCTCCTTCTCTaGGACCGAGAAGCAGAGATGGACACACGTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLLIIPKASLLL*DREAEMDTRVL Trigger: GAGAACACGTGTGTCCATCTCTGCTTCTCGGTCGCAGAGAAGGAGAGAAGCTTTGGGGATTATTAGTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATGTGACTGTAGGAATTaGGCAGGAACAACACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTCDCRN*AGTTHQ Trigger: CTGATGTGTTGTTCCTGCCAAATTCCTACAGTCACA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTAGTCAGCCTAGATCTTaGTATAGTTGCTTCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVQTHLGTELSLLSLRPCSQPRS*YSCFLF Trigger: GAAGAGGAAGCAACTATACAAAGATCTAGGCTGACT...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | CATCAATCGCAACAGCATTTTGAAGATGAAGATGAGTaGGGGATCGCTCATAAGCCTCAAGTGAAGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HQSQQHFEDEDE*GIAHKPQVKAL Trigger: CAAGGCCTTCACTTGAGGCTTATGAGCGATCCCTCACTCATCTTCATCTTCAAAATGCTGTTGCGATTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | CTTCCAGTGTTTTGGACATGCTCTATTGAACACGTCTaGGTCCCTGACAGTCAGCCTAGATCTTTGTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPVFWTCSIEHV*VPDSQPRSLYS Trigger: ACTATACAAAGATCTAGGCTGACTGTCAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAAACACTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | AGTAGCTCCCTTAACAATAAGTATTCTGAGAACTTATaGTCCTCTGGTCCCAGAGCACACGCAGGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSLNNKYSENL*SSGPRAHAGQN Trigger: ATTCTGTCCTGCGTGTGCTCTGGGACCAGAGGACCATAAGTTCTCAGAATACTTATTGTTAAGGGAGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | ACAGTTCTTTTACTGGAGGAGAAGGCAGAAACTGAATaGTTAGTGTACCTGCCTCTTACACCCTTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVLLLEEKAETE*LVYLPLTPFTQ Trigger: CTGAGTGAAGGGTGTAAGAGGCAGGTACACTAACCATTCAGTTTCTGCCTTCTCCTCCAGTAAAAGAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAGACACTGTTGCATTTaGGGAATTCACTGTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTRHCCI*GIHCVS Trigger: GGAAACACAGTGAATTCCCAAAATGCAACAGTGTCT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGAACTAATGTCCAGGTaGATCCTCTTACGATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LVQTHLGTELSLLSLRPCELMSR*ILLRFT Trigger: TGTAAATCGTAAGAGGATCAACCTGGACATTAGTTC...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGTTAAGTCTGAGACCTaGTGTCTGGTGTTATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTVKSET*CLVLSR Trigger: TCTAGATAACACCAGACACAAGGTCTCAGACTTAAC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACGTGAGCAGTCTTGTTaGGATATCTGTATGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IQPQTEQTALSSVVIIRTREQSC*DICMCL Trigger: CAAACACATACAGATATCCAAACAAGACTGCTCACG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | TGTATGTGTTTGCTTTTTGCTGGTTCAGACTCACCTTaGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CMCLLFAGSDSP*NRAESVKSETL Trigger: CAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAGCAAAAAGCAAACACATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTTCCTCTGTCTTTGCTaGTCACACTTGGGAATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: HLWMSDFLLILQKARRRNFLCLC*SHLGIR Trigger: CCGAATTCCCAAGTGTGACAAGCAAAGACAGAGGAA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATCCTCAAGTGAAGGCCTaGACATCTGAAGAGTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLWMSDFLLILQKARRRNPQVKA*TSEESE Trigger: TTCAGACTCTTCAGATGTCAAGGCCTTCACTTGAGG...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTTCTTCCTTCCTCCATaGGCCTATTCTCCAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLWMSDFLLILQKARRRNFFLPP*AYSPKG Trigger: GCCTTTTGGAGAATAGGCCAATGGAGGAAGGAAGAA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR GCA 72 bp | GTACTTCTCTCCACATTAAAAACGTTCACCTATCTTTaGCATCGCCCACTTCCTTTCAGTGTAGGAATATTG | + |
|
Preference number: 3 (lower is better) Translates to: VLLSTLKTFTYL*HRPLPFSVGIL Trigger: CAATATTCCTACACTGAAAGGAAGTGGGCGATGGCAAAGATAGGTGAACGTTTTTAATGTGGAGAGAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATACATTGGTTGATCTGTaGGTGTGTTTTGGTTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLWMSDFLLILQKARRRNTLVDL*VCFGFG Trigger: CCCAAAACCAAAACACACCAACAGATCAACCAATGT...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CCA 72 bp | TTCCTTCCTCCATTGGCCTATTCTCCAAAAGGCAAATaGTACACGCACACAACCTTCTCTTTCTTTAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLPPLAYSPKGK*YTHTTFSFFKN Trigger: ATTTTTAAAGAAAGAGAAGGTTGTGTGCGTGTACCATTTGCCTTTTGGAGAATAGGCCAATGGAGGAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATAATCGCAACAGCATTTaGAAGATGAAGATGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLWMSDFLLILQKARRRNNRNSI*KMKMSE Trigger: CTCACTCATCTTCATCTTCAAAATGCTGTTGCGATT...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | TGTAACCTAACAGCAAGTGATTCTTTATGCCCATTCTaGAAGTCCATAAAAAGAGCAGGTTTGGCTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CNLTASDSLCPF*KSIKRAGLAST Trigger: TGTAGAAGCCAAACCTGCTCTTTTTATGGACTTTCAGAATGGGCATAAAGAATCACTTGCTGTTAGGTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | TTAGTGTTTGAGAAATCCAGGTGCTATGGTAAGTTCTaGGAATCTAAATTAATAGTAGACAGGCCAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVFEKSRCYGKF*ESKLIVDRPVQ Trigger: CTGAACTGGCCTGTCTACTATTAATTTAGATTCTCAGAACTTACCATAGCACCTGGATTTCTCAAACACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR TCA 72 bp | ATAGTAGACAGGCCAATTGAGTTTGAAAGCATAAACTaGTATCCCCATGTAAACATATCCTATGAGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IVDRPIEFESIN*YPHVNISYERN Trigger: ATTTCTCTCATAGGATATGTTTACATGGGGATATCAGTTTATGCTTTCAAACTCAATTGGCCTGTCTACTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTGGAGTCCCCAGGCACTaGCCAGCCATCCGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSFQLATFPAHAAADPGVPRH*PAIRRV Trigger: CACCCTTCGGATGGCTGGGCAGTGCCTGGGGACTCC...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTCGGTCAGCCACAACTTaGCACTGGGGCGGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSFQLATFPAHAAADPRSATT*HWGGKE Trigger: CTCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCG...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACGCTCCAGGAGCTGGTaGGCTGCTGCACATCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTRSRSW*AAAHRS Trigger: GGACCGATGTGCAGCAGCTCACCAGCTCCTGGAGCG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTCAGGAGCTGGTGAGCTaGTGCACATCGGTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSFQLATFPAHAAADPQELVS*CTSVLL Trigger: CAAGAGGACCGATGTGCAGCAGCTCACCAGCTCCTG...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | TGGTGCTGTTGCCCGAGACAGGCAGCAAGCCCTGGCTaGCGTGAGCAGTCTTGTTTGGATATCTGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCCCPRQAASPG*REQSCLDICMC Trigger: ACACATACAGATATCCAAACAAGACTGCTCACGCAAGCCAGGGCTTGCTGCCTGTCTCGGGCAACAGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACTTCTGAGGTCAGCATaGGCCTCCACTCTCCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTLLRSA*ASTLRE Trigger: CTCGCGGAGAGTGGAGGCGCATGCTGACCTCAGAAG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGTGGGCGCTCTGCACTaGCAAAGTCAAGAAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCVGALH*QSQEGG Trigger: GCCACCTTCTTGACTTTGCCAGTGCAGAGCGCCCAC...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTAGGTGGTCAGGTGGCTaGACCAAAGTTGACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCRWSGG*TKVDHQ Trigger: CTGGTGGTCAACTTTGGTTCAGCCACCTGACCACCT...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTCGGAAGGCTGGCAGTTaGCTAGTGAAAGGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCRKAGS*LVKGGQ Trigger: CTGACCACCTTTCACTAGGCAACTGCCAGCCTTCCG...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAACTCTTCCACCAGCTaGCGGAAGGCTGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTNSSTS*RKAGSC Trigger: GCAACTGCCAGCCTTCCGCCAGCTGGTGGAAGAGTT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | CTTTGCCATCGCCCACTTCCTTTCAGTGTAGGAATATaGCTACACATCTCCTTTCCGTGTGCATCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCHRPLPFSVGI*LHISFPCASCP Trigger: CGGGCAGGATGCACACGGAAAGGAGATGTGTAGCAATATTCCTACACTGAAAGGAAGTGGGCGATGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTAGAAGCAACGCCACGTaGTTGAGCAGAATGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCRSNAT*LSRMTE Trigger: CTCGGTCATTCTGCTCAAGCACGTGGCGTTGCTTCT...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACACACCAGTGGGCGCTCTaGACTGGCAAAGTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTHQWAL*TGKVKK Trigger: CTTCTTGACTTTGCCAGTGCAGAGCGCCCACTGGTG...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTGTTGGAGAAAAAGACTaGCAGGATCTGCAGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTNSFQLATFPAHAAADPVGEKD*QDLQGD Trigger: ATCACCCTGCAGATCCTGCCAGTCTTTTTCTCCAAC...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTACAGCGCAGCCCTTCTaGGGTCAGCATGCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCTAQPF*GQHAPP Trigger: TGGAGGCGCATGCTGACCTCAGAAGGGCTGCGCTGT...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTGGCATAATTGTTACCTaGTTCAGGATTGGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSFQLATFPAHAAADPGIIVT*FRIGDV Trigger: CACGTCTCCAATCCTGAATCAGGTAACAATTATGCC...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTAAGACTGGCAGGATCTaGAGGGTGATCAGCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCKTGRI*RVISKS Trigger: AGACTTGCTGATCACCCTGCAGATCCTGCCAGTCTT...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAAAAGTTGACCACCAGTaGGCGCTCTGCACTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTKVDHQ*ALCTGK Trigger: TTTGCCAGTGCAGAGCGCCCACTGGTGGTCAACTTT...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACAGCACATCGGTCCTCTTaGTTCCGGTGCTTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: IQPQTEQTALSSVVIIRTAHRSS*FRCFLT Trigger: GGTTAAGAAGCACCGGAACCAAGAGGACCGATGTGC...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGCAATTTTCCGTCTCTaGACGATGCACACACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCAIFRL*TMHTRS Trigger: TGAACGTGTGTGCATCGTGCAGAGACGGAAAATTGC...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATCTCCGCGAGTGGACTTaGAGCGGCTCAGAAGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: HLWMSDFLLILQKARRRNLREWT*SGSEAT Trigger: CGTTGCTTCTGAGCCGCTCCAAGTCCACTCGCGGAG...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTCCACTCTCCGCGAGTaGACTTGGAGCGGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLWMSDFLLILQKARRRNSTLRE*TWSGSE Trigger: TTCTGAGCCGCTCCAAGTCCACTCGCGGAGAGTGGA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | GCAAGCAAGAATGAATACAGGCTGCAACAGGGTTTCTaGCACTCCAGTTTGGATCAATTCGCTCAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKNEYRLQQGF*HSSLDQFAQKG Trigger: TCCCTTCTGAGCGAATTGATCCAAACTGGAGTGCAAGAAACCCTGTTGCAGCCTGTATTCATTCTTGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | CAAGGGTTTTTCTTCCAGTGTTTTGGACATGCTCTATaGAACACGTCTGCGTCCCTGACAGTCAGCCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGFFFQCFGHAL*NTSASLTVSLD Trigger: ATCTAGGCTGACTGTCAGGGACGCAGACGTGTTCAATAGAGCATGTCCAAAACACTGGAAGAAAAACCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCAGACTCACCTTGGAACAGAGCTGAGTCTGTTAAGTCTGAGACCTTGTGAATTCATCTCTTGCTaGAATTCTTCTCCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVQTHLGTELSLLSLRPCEFISC*NSSPAN Trigger: GTTGGCTGGAGAAGAATTTCAGCAAGAGATGAATTC...ACAAGGTCTCAGACTTAACAGACTCAGCTCTGTTCCAAGGTGAGTCTGAACCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTGCAAAGTCAAGAAGGTaGCATTCGGCCCCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCAKSRR*HSAPSA Trigger: CGCTGATGGGGCCGAATGCCACCTTCTTGACTTTGC...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTCAGCCATCCGAAGGGTaGGCCTCATCAATGTATACC | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCQPSEG*ASSMYT Trigger: GGTATACATTGATGAGGCTCACCCTTCGGATGGCTG...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | TTTCCCAGCTGTGTACATGCCTCAATGCTGATGCTGTaGAACAACACTCATTACCTACAGCTTCCAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPSCVHASMLML*NNTHYLQLPGK Trigger: TTTACCTGGAAGCTGTAGGTAATGAGTGTTGTTCAACAGCATCAGCATTGAGGCATGTACACAGCTGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | ACTTCTTTAGGGAGCCACATCAATCGCAACAGCATTTaGAAGATGAAGATGAGTGAGGGATCGCTCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLGSHINRNSI*KMKMSEGSLIS Trigger: GCTTATGAGCGATCCCTCACTCATCTTCATCTTCAAAATGCTGTTGCGATTGATGTGGCTCCCTAAAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTTCCGTCTCTGCACGATaGACACACGTTCAAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCSVSAR*THVQRL Trigger: TAGCCTTTGAACGTGTGTGCATCGTGCAGAGACGGA...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATGCACCACACTGGAATTaGGAGCATCTTCACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLWMSDFLLILQKARRRNAPHWN*EHLHPV Trigger: AACTGGGTGAAGATGCTCCCAATTCCAGTGTGGTGC...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTAGACGTGCACCACACTaGAATTGGGAGCATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCRRAPH*NWEHLH Trigger: GTGAAGATGCTCCCAATTCCAGTGTGGTGCACGTCT...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTTACCTGATTCAGGATTaGAGACGTGCACCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCYLIQD*RRAPHW Trigger: CCAGTGTGGTGCACGTCTCCAATCCTGAATCAGGTA...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATCCCCGTAAGCTACGTTaGCATTATTGTCCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLWMSDFLLILQKARRRNPRKLR*HYCPCG Trigger: ACCGCATGGACAATAATGCCAACGTAGCTTACGGGG...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATTGGCATTATTGTCCATaGGGTCAGCCACAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLWMSDFLLILQKARRRNWHYCP*GQPQLD Trigger: GTCAAGTTGTGGCTGACCGCATGGACAATAATGCCA...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | ACATTTGCTGGGCAGGCTCTACATTCAAGGAAGTCATaGTCCAGGTTACTTCCTCTAATCAACAAACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFAGQALHSRKS*SRLLPLINKLK Trigger: CTTTAGTTTGTTGATTAGAGGAAGTAACCTGGACAATGACTTCCTTGAATGTAGAGCCTGCCCAGCAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTTCCTCTTGGTTCCGGTaGTTCTTAACCTCAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERNLYVLRKVTARDVCVCSSWFR*FLTSKD Trigger: GTCTTTTGAGGTTAAGAAGCACCGGAACCAAGAGGA...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | AGTACTTCTCTCCACATTAAAAACGTTCACCTATCTTaGCCATCGCCCACTTCCTTTCAGTGTAGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: STSLHIKNVHLS*PSPTSFQCRNI Trigger: AATATTCCTACACTGAAAGGAAGTGGGCGATGGCAAAGATAGGTGAACGTTTTTAATGTGGAGAGAAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| 3UTR CAA 72 bp | ATGATTCTACAGAAGTTCATTAGACACTGTTGCATTTaGGGAATTCACTGTGTTTCCTTGTGGGTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MILQKFIRHCCI*GIHCVSLWVCL Trigger: AAGACACACCCACAAGGAAACACAGTGAATTCCCAAAATGCAACAGTGTCTAATGAACTTCTGTAGAATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS GCA 90 bp | ACACTGGGGCGGCAAGGAGAAACGCTCCAGGAGCTGGTGAGCTGCTaGACATCGGTCCTCTTGGTTCCGGTGCTTCTTAACCTCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLGRQGETLQELVSC*TSVLLVPVLLNLKR Trigger: TCTTTTGAGGTTAAGAAGCACCGGAACCAAGAGGACCGATGTGCAGCAGCTCACCAGCTCCTGGAGCGTTTCTCCTTGCCGCCCCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS GCA 90 bp | TTGACACTGGGGCGGCAAGGAGAAACGCTCCAGGAGCTGGTGAGCTaGTGCACATCGGTCCTCTTGGTTCCGGTGCTTCTTAACCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTLGRQGETLQELVS*CTSVLLVPVLLNLK Trigger: TTTGAGGTTAAGAAGCACCGGAACCAAGAGGACCGATGTGCAGCAGCTCACCAGCTCCTGGAGCGTTTCTCCTTGCCGCCCCAGTGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS CCA 90 bp | TATACCAACAGGAAGTCAGCCACCGAGGAGAACTCTTCCACCAGCTaGCGGAAGGCTGGCAGTTGCCTAGTGAAAGGTGGTCAGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YTNRKSATEENSSTS*RKAGSCLVKGGQVA Trigger: AGCCACCTGACCACCTTTCACTAGGCAACTGCCAGCCTTCCGCCAGCTGGTGGAAGAGTTCTCCTCGGTGGCTGACTTCCTGTTGGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS CCA 90 bp | GACCGAGTCATAGAGCGCCAGGAAGAGGCAGTTGGAGAAAAAGACTaGCAGGATCTGCAGGGTGATCAGCAAGTCTACGCTGAGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRVIERQEEAVGEKD*QDLQGDQQVYAEES Trigger: GGACTCCTCAGCGTAGACTTGCTGATCACCCTGCAGATCCTGCCAGTCTTTTTCTCCAACTGCCTCTTCCTGGCGCTCTATGACTCGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS GCA 90 bp | CACGTTCAAAGGCTACCCCGTAAGCTACGTTGGCATTATTGTCCATaGGGTCAGCCACAACTTGACACTGGGGCGGCAAGGAGAAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVQRLPRKLRWHYCP*GQPQLDTGAARRNA Trigger: AGCGTTTCTCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTAGCTTACGGGGTAGCCTTTGAACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS CCA 90 bp | TCTGCACGATGCACACACGTTCAAAGGCTACCCCGTAAGCTACGTTaGCATTATTGTCCATGCGGTCAGCCACAACTTGACACTGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SARCTHVQRLPRKLR*HYCPCGQPQLDTGA Trigger: CGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTAGCTTACGGGGTAGCCTTTGAACGTGTGTGCATCGTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTAGCAACGCCACGTGCTaGAGCAGAATGACCGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTNSFQLATFPAHAAADPSNATC*SRMTES Trigger: TGACTCGGTCATTCTGCTCAAGCACGTGGCGTTGCT...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATCTCCGCGAGTGGACTaGGAGCGGCTCAGAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQPQTEQTALSSVVIIRTSPRVD*ERLRSN Trigger: GTTGCTTCTGAGCCGCTCCAAGTCCACTCGCGGAGA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTAATTCCTTCCAGTTAGCAACTTTCCCAGCTCACGCAGCTGCAGATCCTTGCACATCGGTCCTCTaGGTTCCGGTGCTTCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTNSFQLATFPAHAAADPCTSVL*VPVLLN Trigger: GTTAAGAAGCACCGGAACCAAGAGGACCGATGTGCA...AGGATCTGCAGCTGCGTGAGCTGGGAAAGTTGCTAACTGGAAGGAATTAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS CCA 90 bp | CATCAGCGGTCTTCTCCGAGGCATAATTGTTACCTGATTCAGGATTaGAGACGTGCACCACACTGGAATTGGGAGCATCTTCACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HQRSSPRHNCYLIQD*RRAPHWNWEHLHPV Trigger: AACTGGGTGAAGATGCTCCCAATTCCAGTGTGGTGCACGTCTCCAATCCTGAATCAGGTAACAATTATGCCTCGGAGAAGACCGCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | ATCCAACCACAGACTGAGCAGACAGCTCTTTCGTCAGTAGTTATCATTCGCACATGCACCACACTGGAATaGGGAGCATCTTCACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IQPQTEQTALSSVVIIRTCTTLE*GASSPS Trigger: ACTGGGTGAAGATGCTCCCAATTCCAGTGTGGTGCA...TGTGCGAATGATAACTACTGACGAAAGAGCTGTCTGCTCAGTCTGTGGTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | CATCTCTGGATGAGTGACTTCTTGTTAATTTTACAAAAGGCACGTCGTAGGAATGCGGTCAGCCACAACTaGACACTGGGGCGGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLWMSDFLLILQKARRRNAVSHN*TLGRQG Trigger: TCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGC...ATTCCTACGACGTGCCTTTTGTAAAATTAACAAGAAGTCACTCATCCAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTGTGGCTGAACCAAAGTaGACCACCAGTGGGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERNLYVLRKVTARDVCVCVAEPK*TTSGRS Trigger: AGAGCGCCCACTGGTGGTCAACTTTGGTTCAGCCAC...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAATCTTTATGTTCTAAGAAAGGTAACTGCAAGGGATGTGTGTGTGTGTGCTACGTTGGCATTATaGTCCATGCGGTCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ERNLYVLRKVTARDVCVCATLAL*SMRSAT Trigger: TGTGGCTGACCGCATGGACAATAATGCCAACGTAGC...ACACACACACACATCCCTTGCAGTTACCTTTCTTAGAACATAAAGATTTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
||
| CDS CAA 72 bp | GAGGTCAGCATGCGCCTCCACTCTCCGCGAGTGGACTaGGAGCGGCTCAGAAGCAACGCCACGTGCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: EVSMRLHSPRVD*ERLRSNATCLS Trigger: GCTCAAGCACGTGGCGTTGCTTCTGAGCCGCTCCAAGTCCACTCGCGGAGAGTGGAGGCGCATGCTGACCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS GCA 72 bp | GGGCGGCAAGGAGAAACGCTCCAGGAGCTGGTGAGCTaGTGCACATCGGTCCTCTTGGTTCCGGTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GRQGETLQELVS*CTSVLLVPVLL Trigger: AAGAAGCACCGGAACCAAGAGGACCGATGTGCAGCAGCTCACCAGCTCCTGGAGCGTTTCTCCTTGCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CCA 72 bp | ACCAGTGGGCGCTCTGCACTGGCAAAGTCAAGAAGGTaGCATTCGGCCCCATCAGCGGTCTTCTCCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSGRSALAKSRR*HSAPSAVFSEA Trigger: TGCCTCGGAGAAGACCGCTGATGGGGCCGAATGCCACCTTCTTGACTTTGCCAGTGCAGAGCGCCCACTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CAA 90 bp | CCCGTAAGCTACGTTGGCATTATTGTCCATGCGGTCAGCCACAACTaGACACTGGGGCGGCAAGGAGAAACGCTCCAGGAGCTGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: PVSYVGIIVHAVSHN*TLGRQGETLQELVS Trigger: GCTCACCAGCTCCTGGAGCGTTTCTCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTAGCTTACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CAA 90 bp | GCTGGCAGTTGCCTAGTGAAAGGTGGTCAGGTGGCTGAACCAAAGTaGACCACCAGTGGGCGCTCTGCACTGGCAAAGTCAAGAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGSCLVKGGQVAEPK*TTSGRSALAKSRRW Trigger: CCACCTTCTTGACTTTGCCAGTGCAGAGCGCCCACTGGTGGTCAACTTTGGTTCAGCCACCTGACCACCTTTCACTAGGCAACTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS TCA 72 bp | ACGTTGGCATTATTGTCCATGCGGTCAGCCACAACTTaGCACTGGGGCGGCAAGGAGAAACGCTCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TLALLSMRSATT*HWGGKEKRSRS Trigger: GCTCCTGGAGCGTTTCTCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS GCA 72 bp | GAGAACTCTTCCACCAGCTGGCGGAAGGCTGGCAGTTaGCTAGTGAAAGGTGGTCAGGTGGCTGAACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ENSSTSWRKAGS*LVKGGQVAEPK Trigger: CTTTGGTTCAGCCACCTGACCACCTTTCACTAGGCAACTGCCAGCCTTCCGCCAGCTGGTGGAAGAGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS GCA 72 bp | AGGCTACCCCGTAAGCTACGTTGGCATTATTGTCCATaGGGTCAGCCACAACTTGACACTGGGGCGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RLPRKLRWHYCP*GQPQLDTGAAR Trigger: CCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTAGCTTACGGGGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CAA 72 bp | TGCCTAGTGAAAGGTGGTCAGGTGGCTGAACCAAAGTaGACCACCAGTGGGCGCTCTGCACTGGCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: CLVKGGQVAEPK*TTSGRSALAKS Trigger: TGACTTTGCCAGTGCAGAGCGCCCACTGGTGGTCAACTTTGGTTCAGCCACCTGACCACCTTTCACTAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CAA 72 bp | TACGTTGGCATTATTGTCCATGCGGTCAGCCACAACTaGACACTGGGGCGGCAAGGAGAAACGCTCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: YVGIIVHAVSHN*TLGRQGETLQE Trigger: CTCCTGGAGCGTTTCTCCTTGCCGCCCCAGTGTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS GCA 72 bp | AGGAAGAGGCAGTTGGAGAAAAAGACTGGCAGGATCTaGAGGGTGATCAGCAAGTCTACGCTGAGGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RKRQLEKKTGRI*RVISKSTLRSP Trigger: GGGACTCCTCAGCGTAGACTTGCTGATCACCCTGCAGATCCTGCCAGTCTTTTTCTCCAACTGCCTCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CCA 72 bp | TGCACACACGTTCAAAGGCTACCCCGTAAGCTACGTTaGCATTATTGTCCATGCGGTCAGCCACAACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: CTHVQRLPRKLR*HYCPCGQPQLD Trigger: GTCAAGTTGTGGCTGACCGCATGGACAATAATGCCAACGTAGCTTACGGGGTAGCCTTTGAACGTGTGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS TCA 72 bp | CCCATCAGCGGTCTTCTCCGAGGCATAATTGTTACCTaGTTCAGGATTGGAGACGTGCACCACACTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: PISGLLRGIIVT*FRIGDVHHTGI Trigger: AATTCCAGTGTGGTGCACGTCTCCAATCCTGAATCAGGTAACAATTATGCCTCGGAGAAGACCGCTGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS GCA 72 bp | TCCCTCCTAAGTAAGCAATTTTCCGTCTCTGCACGATaGACACACGTTCAAAGGCTACCCCGTAAGCTACGT | + |
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Preference number: 6 (lower is better) Translates to: SLLSKQFSVSAR*THVQRLPRKLR Trigger: ACGTAGCTTACGGGGTAGCCTTTGAACGTGTGTGCATCGTGCAGAGACGGAAAATTGCTTACTTAGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS TCA 72 bp | TCTCCAGCCAACTTCGGACTTCTTGTAGGTTATAGCTaGAGGGGCCCTTCCCTCCTAAGTAAGCAATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPANFGLLVGYS*RGPSLLSKQFS Trigger: GGAAAATTGCTTACTTAGGAGGGAAGGGCCCCTTCAGCTATAACCTACAAGAAGTCCGAAGTTGGCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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| CDS CCA 72 bp | TCTTCTCCGAGGCATAATTGTTACCTGATTCAGGATTaGAGACGTGCACCACACTGGAATTGGGAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SSPRHNCYLIQD*RRAPHWNWEHL Trigger: AAGATGCTCCCAATTCCAGTGTGGTGCACGTCTCCAATCCTGAATCAGGTAACAATTATGCCTCGGAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082432.6 |
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