Pregenerated sensors for DIMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021692Ensembl transcript IDs: ENSMUST00000022203.10, ENSMUST00000224052.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAATCTGATTTCAGTACATCTCCCACCAGGACCTGGAGTTTGCTaGCCAGAGGCGTGCCCTGAACTCTTTTGTGAAGTTCAGCTACTA | + |
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Preference number: 1 (lower is better) Translates to: ANLISVHLPPGPGVC*PEACPELFCEVQLL Trigger: TAGTAGCTGAACTTCACAAAAGAGTTCAGGGCACGCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGATGTACTGAAATCAGATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR TCA 90 bp | GATCAAGTTCACAGGCAACTACCTTTTTGGCCTTTTCTAACAGCTTaGCAGTCATATTGCCAGTCCCAGGCCCAACTTCCAGCACCACAT | + |
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Preference number: 1 (lower is better) Translates to: DQVHRQLPFWPFLTA*QSYCQSQAQLPAPH Trigger: ATGTGGTGCTGGAAGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTGAACTTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR TCA 90 bp | CTGATAAGGCAAGTTTGCCACACAAGCATCAAAGAATGGCAAATCTaGTTTCAGTACATCTCCCACCAGGACCTGGAGTTTGCTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LIRQVCHTSIKEWQI*FQYISHQDLEFAGQ Trigger: CTGGCCAGCAAACTCCAGGTCCTGGTGGGAGATGTACTGAAATCAGATTTGCCATTCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR TCA 90 bp | TCCCCACCTTCATTAGATGGTCCACGCGTGCTAAAAGCTGTGTGTTaGTGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACCA | + |
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Preference number: 1 (lower is better) Translates to: SPPSLDGPRVLKAVC*WRVYSIIYLQAWQP Trigger: TGGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCATCTAATGAAGGTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR GCA 90 bp | ATGAGTTTTTACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATaGAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: MSFYFLSFCILQVVL*RTCLYCHCSRLSSQ Trigger: CTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTAAAAACTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR GCA 90 bp | TACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTaGCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGAT | + |
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Preference number: 1 (lower is better) Translates to: YFLSFCILQVVLCRT*LYCHCSRLSSQNYD Trigger: ATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR TCA 90 bp | AAACTTACTTTGCACAAGTATAACCCCAGAATTTATTTAGGAGGCTaGGGCAAGAGTCTGAGATTAAAGTCAACCTCCAAAAGACCCTCT | + |
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Preference number: 1 (lower is better) Translates to: KLTLHKYNPRIYLGG*GKSLRLKSTSKRPS Trigger: AGAGGGTCTTTTGGAGGTTGACTTTAATCTCAGACTCTTGCCTCAGCCTCCTAAATAAATTCTGGGGTTATACTTGTGCAAAGTAAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACCAATCGAAGAGCATCTCCCACCAGGACCTaGAGTTTGCTGGCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: MESLQYNLSPGLATNRRASPTRT*SLLARG Trigger: GCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGA...TGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR CAA 90 bp | GGATCAAGTTCACAGGCAACTACCTTTTTGGCCTTTTCTAACAGCTaGACAGTCATATTGCCAGTCCCAGGCCCAACTTCCAGCACCACA | + |
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Preference number: 2 (lower is better) Translates to: GSSSQATTFLAFSNS*TVILPVPGPTSSTT Trigger: TGTGGTGCTGGAAGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTGAACTTGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATTGATTGGTGGTGGCGGATTCTTAGGTTCTATCCTGACCACGCTGGACTCAGCACATCTGAAAAATaGCCGGTGGAGCAGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: KIDWWWRILRFYPDHAGLSTSEK*PVEQQL Trigger: AAGTTGCTGCTCCACCGGCCATTTTTCAGATGTGCT...GAGTCCAGCGTGGTCAGGATAGAACCTAAGAATCCGCCACCACCAATCAATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR CAA 90 bp | TTCCCCACCTTCATTAGATGGTCCACGCGTGCTAAAAGCTGTGTGTaGATGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACC | + |
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Preference number: 2 (lower is better) Translates to: FPTFIRWSTRAKSCV*MESLQYNLSPGLAT Trigger: GGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCATCTAATGAAGGTGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGAGGCAAATAATAACACGTAGGGTGAAGGTGTGTGAAGAAAAGTCACATGGCTTTCTGACTAGTTaGGTGAGCTGTAGGCCTACG | + |
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Preference number: 2 (lower is better) Translates to: CKRQIITRRVKVCEEKSHGFLTS*VSCRPT Trigger: CGTAGGCCTACAGCTCACTCAACTAGTCAGAAAGCC...ATGTGACTTTTCTTCACACACCTTCACCCTACGTGTTATTATTTGCCTCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR-3UTR TCA 90 bp | AAAATTGATTGGTGGTGGCGGATTCTTAGGTTCTATCCTGACCACGCTGGACTCAAAGAATGGCAAATCTaGTTTCAGTACATCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: KIDWWWRILRFYPDHAGLKEWQI*FQYISH Trigger: GTGGGAGATGTACTGAAATCAGATTTGCCATTCTTT...GAGTCCAGCGTGGTCAGGATAGAACCTAAGAATCCGCCACCACCAATCAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCACGCGTGCTAAAAGCTGTGTGTTGATGGAGAGTCTACAGTATAATTTACTGATAAGGCAAGTTTaGCACACAAGCATCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: WSTRAKSCVLMESLQYNLLIRQV*HTSIKE Trigger: TTCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAG...TAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR GCA 72 bp | CTGATTTCAGTACATCTCCCACCAGGACCTGGAGTTTaGTGGCCAGAGGCGTGCCCTGAACTCTTTTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: LISVHLPPGPGV*WPEACPELFCE Trigger: TTCACAAAAGAGTTCAGGGCACGCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGATGTACTGAAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR CCA 72 bp | ATTTCAGTACATCTCCCACCAGGACCTGGAGTTTGCTaGCCAGAGGCGTGCCCTGAACTCTTTTGTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: ISVHLPPGPGVC*PEACPELFCEV Trigger: AACTTCACAAAAGAGTTCAGGGCACGCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGATGTACTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR CCA 72 bp | GGCGGTCTGAAGTTATTCTTCCCCACCTTCATTAGATaGTCCACGCGTGCTAAAAGCTGTGTGTTGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: GGLKLFFPTFIR*STRAKSCVLME Trigger: CTCCATCAACACACAGCTTTTAGCACGCGTGGACCATCTAATGAAGGTGGGGAAGAATAACTTCAGACCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR TCA 72 bp | CACAGGCAACTACCTTTTTGGCCTTTTCTAACAGCTTaGCAGTCATATTGCCAGTCCCAGGCCCAACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: HRQLPFWPFLTA*QSYCQSQAQLP Trigger: TGGAAGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGAATGGCAAATCTGATTTCAGTACATCTCCCACCAGGACCTGGAGTTTGAGCTTGACAGTCATATaGCCAGTCCCAGGCCCAACT | + |
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Preference number: 3 (lower is better) Translates to: SKNGKSDFSTSPTRTWSLSLTVI*PVPGPT Trigger: AGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCT...CAAACTCCAGGTCCTGGTGGGAGATGTACTGAAATCAGATTTGCCATTCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR CAA 90 bp | AAAATTGATTGGTGGTGGCGGATTCTTAGGTTCTATCCTGACCACGCTGGACTCCAGGCAACTACCTTTTaGGCCTTTTCTAACAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: KIDWWWRILRFYPDHAGLQATTF*AFSNSL Trigger: CAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTG...GAGTCCAGCGTGGTCAGGATAGAACCTAAGAATCCGCCACCACCAATCAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR GCA 72 bp | AGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTaGCTGTACTGTCATTGCAGCAGACTCAGCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SFCILQVVLCRT*LYCHCSRLSSQ Trigger: CTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR TCA 72 bp | CAAGTTTGCCACACAAGCATCAAAGAATGGCAAATCTaGTTTCAGTACATCTCCCACCAGGACCTGGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: QVCHTSIKEWQI*FQYISHQDLEF Trigger: AAACTCCAGGTCCTGGTGGGAGATGTACTGAAATCAGATTTGCCATTCTTTGATGCTTGTGTGGCAAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR GCA 72 bp | CAGGTAGTCTTATGCAGAACTTGCCTGTACTGTCATTaGAGCAGACTCAGCTCCCAGAATTATGATGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: QVVLCRTCLYCH*SRLSSQNYDVV Trigger: AACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAAGACTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR TCA 72 bp | TCATTAGATGGTCCACGCGTGCTAAAAGCTGTGTGTTaGTGGAGAGTCTACAGTATAATTTATCTCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SLDGPRVLKAVC*WRVYSIIYLQA Trigger: AGCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCATCTAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTTAGGAGGCTGAGGCAAGAGTCTGAGATTAAAGTCAACCTCCAAAAGACCAATGAGACCACCTATTaGATTGACAAAACCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LFRRLRQESEIKVNLQKTNETTY*IDKTLQ Trigger: CTGGAGGGTTTTGTCAATCAAATAGGTGGTCTCATT...GGTCTTTTGGAGGTTGACTTTAATCTCAGACTCTTGCCTCAGCCTCCTAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACCAATCGAAGAGCAAACTTCTGATAAGGCAAGTTaGCCACACAAGCATCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RVYSIIYLQAWQPIEEQTSDKAS*PHKHQR Trigger: TCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAGA...AGTTTGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR TCA 72 bp | TTGCACAAGTATAACCCCAGAATTTATTTAGGAGGCTaGGGCAAGAGTCTGAGATTAAAGTCAACCTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LHKYNPRIYLGG*GKSLRLKSTSK Trigger: TTTGGAGGTTGACTTTAATCTCAGACTCTTGCCTCAGCCTCCTAAATAAATTCTGGGGTTATACTTGTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | CTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTTCCCGGCGCTGCTCCTaGCGATCCCGCCGGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LYCHCSRLSSQNYDVVCVSRRCS*RSRRRL Trigger: TAGCCGCCGGCGGGATCGTCAGGAGCAGCGCCGGGA...AACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | ATGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACCAATCGAAGAGCATCCCGGCGCTGCTCCTaGCGATCCCGCCGGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: MESLQYNLSPGLATNRRASRRCS*RSRRRL Trigger: TAGCCGCCGGCGGGATCGTCAGGAGCAGCGCCGGGA...TGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| 3UTR CAA 72 bp | TCACAGGCAACTACCTTTTTGGCCTTTTCTAACAGCTaGACAGTCATATTGCCAGTCCCAGGCCCAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SQATTFLAFSNS*TVILPVPGPTS Trigger: GGAAGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS-3UTR CCA 90 bp | TTTTACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTGCCTGTCTCCCACCAGGACCTaGAGTTTGCTGGCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FYFLSFCILQVVLCRTCLSPTRT*SLLARG Trigger: GCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGA...CAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CCA 90 bp | TTATGCAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATAGCACATCTGAAAAATaGCCGGTGGAGCAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: LCRTCLYCHCSRLSSQNYSTSEK*PVEQQL Trigger: AAGTTGCTGCTCCACCGGCCATTTTTCAGATGTGCT...ATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR CAA 72 bp | AAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTaGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLLHFTGSLMQN*PVLSLQQTQLP Trigger: TGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | TTATGCAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATCCTTTTCTAACAGCTTaGCAGTCATATTGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LCRTCLYCHCSRLSSQNYPFLTA*QSYCQS Trigger: GGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGG...ATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | ACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTGCAATTTTCCGAACAAAAGTaGTCCTTACTAAGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TVIAADSAPRIMMLFVLQFSEQK*SLLSRP Trigger: GGGACGGCTTAGTAAGGATCACTTTTGTTCGGAAAA...TTGCAACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CCA 90 bp | TTATGCAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATCTGAAAATTGATTGGTaGTGGCGGATTCTTAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LCRTCLYCHCSRLSSQNYLKIDW*WRILRF Trigger: GAACCTAAGAATCCGCCACCACCAATCAATTTTCAG...ATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| 3UTR CAA 72 bp | TTCATTAGATGGTCCACGCGTGCTAAAAGCTGTGTGTaGATGGAGAGTCTACAGTATAATTTATCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FIRWSTRAKSCV*MESLQYNLSPG Trigger: GCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCATCTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS-3UTR TCA 90 bp | TTATGCAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATAAAGAATGGCAAATCTaGTTTCAGTACATCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LCRTCLYCHCSRLSSQNYKEWQI*FQYISH Trigger: GTGGGAGATGTACTGAAATCAGATTTGCCATTCTTT...ATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | AAGCTTAAGTGTATGTTGTGTGTGTCTGTGGCTTTCAAACTTAAAGACCATTATGGTGGAGCAGCAACTTaGAGACAAAGGGAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KLKCMLCVSVAFKLKDHYGGAAT*RQRERR Trigger: TCTCCTCTCCCTTTGTCTTCAAGTTGCTGCTCCACC...ATAATGGTCTTTAAGTTTGAAAGCCACAGACACACACAACATACACTTAAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | GCTACTAGCCTTGGATCAAGTTCACAGGCAACTACCTTTTTGGCCTTTTCTAACGGAACAAACTCAGTGTaGTTTGGACGTAAATTTACG | + |
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Preference number: 4 (lower is better) Translates to: ATSLGSSSQATTFLAFSNGTNSV*FGRKFT Trigger: CGTAAATTTACGTCCAAATCACACTGAGTTTGTTCC...GTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTGAACTTGATCCAAGGCTAGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS-3UTR GCA 90 bp | CTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTCTGATAAGGCAAGTTTaGCACACAAGCATCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LYCHCSRLSSQNYDVVCVLIRQV*HTSIKE Trigger: TTCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAG...AACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CCA 90 bp | ACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTGCAAAAAATTGATTGGTGGTaGCGGATTCTTAGGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: TVIAADSAPRIMMLFVLQKIDWW*RILRFY Trigger: ATAGAACCTAAGAATCCGCCACCACCAATCAATTTT...TTGCAACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR TCA 90 bp | AATTTATTTAGGAGGCTGAGGCAAGAGTCTGAGATTAAAGTCAACCTCCAAAAGCTAAAAGCTGTGTGTTaGTGGAGAGTCTACAGTATA | + |
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Preference number: 4 (lower is better) Translates to: NLFRRLRQESEIKVNLQKLKAVC*WRVYSI Trigger: TATACTGTAGACTCTCCATCAACACACAGCTTTTAG...CTTTTGGAGGTTGACTTTAATCTCAGACTCTTGCCTCAGCCTCCTAAATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CCA 90 bp | TTTTACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTGCCTGATTTATCTCCAGGCTTaGCAACCAATCGAAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: FYFLSFCILQVVLCRTCLIYLQA*QPIEEQ Trigger: TTGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAAT...CAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CCA 90 bp | TTTTACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTGCCTGTTCCTGAAAATTGATTaGTGGTGGCGGATTCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: FYFLSFCILQVVLCRTCLFLKID*WWRILR Trigger: CCTAAGAATCCGCCACCACCAATCAATTTTCAGGAA...CAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS TCA 90 bp | TTGAACATGAGTCCTCCAGCTCGCTTCAGCTCCCGGCGCTGCTCCTaGCGATCCCGCCGGCGGCTACTCGCTGCGGACTTGGCCTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: LNMSPPARFSSRRCS*RSRRRLLAADLAFG Trigger: GCCGAAGGCCAAGTCCGCAGCGAGTAGCCGCCGGCGGGATCGTCAGGAGCAGCGCCGGGAGCTGAAGCGAGCTGGAGGACTCATGTTCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022203.10 ENSMUST00000224052.2 |
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| CDS-3UTR CAA 90 bp | CTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTTGTCCGATCCCTGTGTaGAACATGAGTCCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LYCHCSRLSSQNYDVVCVCPIPV*NMSPPA Trigger: AGCTGGAGGACTCATGTTCAACACAGGGATCGGACA...AACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | GGCAAGAGTCTGAGATTAAAGTCAACCTCCAAAAGACCCTCTCATTCAAGAAAGAGCTTGACAGTCATATaGCCAGTCCCAGGCCCAACT | + |
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Preference number: 5 (lower is better) Translates to: GKSLRLKSTSKRPSHSRKSLTVI*PVPGPT Trigger: AGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCT...CTTTCTTGAATGAGAGGGTCTTTTGGAGGTTGACTTTAATCTCAGACTCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | AAAAGCTGTGTGTTGATGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCATGTCCGATCCCTGTGTaGAACATGAGTCCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: KSCVLMESLQYNLSPGLACPIPV*NMSPPA Trigger: AGCTGGAGGACTCATGTTCAACACAGGGATCGGACA...TGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS TCA 90 bp | TTGTTTTTCCGAACAAAAGTGATCCTTACTAAGCCGTCCCATTCCTaGAAATTGATTGGTGGTGGCGGATTCTTAGGTTCTATCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: LFFRTKVILTKPSHS*KLIGGGGFLGSILT Trigger: GGTCAGGATAGAACCTAAGAATCCGCCACCACCAATCAATTTTCAGGAATGGGACGGCTTAGTAAGGATCACTTTTGTTCGGAAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | GGCAAGAGTCTGAGATTAAAGTCAACCTCCAAAAGACCCTCTCATTCAAGAAAGGCCTTTTCTAACAGCTaGACAGTCATATTGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GKSLRLKSTSKRPSHSRKAFSNS*TVILPV Trigger: GACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGC...CTTTCTTGAATGAGAGGGTCTTTTGGAGGTTGACTTTAATCTCAGACTCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | CTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTCAGGCAACTACCTTTTaGGCCTTTTCTAACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LYCHCSRLSSQNYDVVCVQATTF*AFSNSL Trigger: CAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTG...AACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | TTATGCAGAACTTGCCTGTACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGCTAAAAGCTGTGTGTaGATGGAGAGTCTACAGTAT | + |
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Preference number: 5 (lower is better) Translates to: LCRTCLYCHCSRLSSQNYAKSCV*MESLQY Trigger: ATACTGTAGACTCTCCATCAACACACAGCTTTTAGC...ATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGTACAGGCAAGTTCTGCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | ACTGTCATTGCAGCAGACTCAGCTCCCAGAATTATGATGTTGTTTGTGTTGCAATCTGATAAGGCAAGTTaGCCACACAAGCATCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: TVIAADSAPRIMMLFVLQSDKAS*PHKHQR Trigger: TCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAGA...TTGCAACACAAACAACATCATAATTCTGGGAGCTGAGTCTGCTGCAATGACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | ATGGAGAGTCTACAGTATAATTTATCTCCAGGCTTGGCAACCAATCGAAGAGCACAAACTCAGTGTGATTaGGACGTAAATTTACGGTCT | + |
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Preference number: 5 (lower is better) Translates to: MESLQYNLSPGLATNRRAQTQCD*DVNLRS Trigger: AGACCGTAAATTTACGTCCAAATCACACTGAGTTTG...TGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS-3UTR CAA 90 bp | GTCTACAGTATAATTTATCTCCAGGCTTGGCAACCAATCGAAGAGCAAACTCTCATTTTTCAAAATGTGTaGTCCGATCCCTGTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VYSIIYLQAWQPIEEQTLIFQNV*SDPCVE Trigger: TTCAACACAGGGATCGGACAACACATTTTGAAAAAT...GAGAGTTTGCTCTTCGATTGGTTGCCAAGCCTGGAGATAAATTATACTGTAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224052.2 |
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| CDS-3UTR CAA 90 bp | AAGCTTAAGTGTATGTTGTGTGTGTCTGTGGCTTTCAAACTTAAAGACCATTATTGGATGCCTTCTGCATaGAATCCATGTAGCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: KLKCMLCVSVAFKLKDHYWMPSA*NPCSNL Trigger: CAGGTTGCTACATGGATTCAATGCAGAAGGCATCCA...ATAATGGTCTTTAAGTTTGAAAGCCACAGACACACACAACATACACTTAAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS-3UTR CAA 90 bp | TTTTACTTTCTAAGCTTCTGCATTTTACAGGTAGTCTTATGCAGAACTTGCCTGATTTTTCAAAATGTGTaGTCCGATCCCTGTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: FYFLSFCILQVVLCRTCLIFQNV*SDPCVE Trigger: TTCAACACAGGGATCGGACAACACATTTTGAAAAAT...CAGGCAAGTTCTGCATAAGACTACCTGTAAAATGCAGAAGCTTAGAAAGTAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS TCA 72 bp | AGTCCTCCAGCTCGCTTCAGCTCCCGGCGCTGCTCCTaGCGATCCCGCCGGCGGCTACTCGCTGCGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SPPARFSSRRCS*RSRRRLLAADL Trigger: CAAGTCCGCAGCGAGTAGCCGCCGGCGGGATCGTCAGGAGCAGCGCCGGGAGCTGAAGCGAGCTGGAGGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022203.10 ENSMUST00000224052.2 |
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| CDS CAA 90 bp | CAGGCAACTACCTTTTTGGCCTTTTCTAACAGCTTGACAGTCATATaGCCAGTCCCAGGCCCAACTTCCAGCACCACATCGGTAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QATTFLAFSNSLTVI*PVPGPTSSTTSVGL Trigger: AAGACCTACCGATGTGGTGCTGGAAGTTGGGCCTGGGACTGGCAATATGACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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| CDS TCA 72 bp | CGAACAAAAGTGATCCTTACTAAGCCGTCCCATTCCTaGAAATTGATTGGTGGTGGCGGATTCTTAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RTKVILTKPSHS*KLIGGGGFLGS Trigger: AGAACCTAAGAATCCGCCACCACCAATCAATTTTCAGGAATGGGACGGCTTAGTAAGGATCACTTTTGTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022203.10 |
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