RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIDO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038914

Ensembl transcript IDs: ENSMUST00000037764.12, ENSMUST00000087517.10, ENSMUST00000103055.8, ENSMUST00000103056.10, ENSMUST00000103057.8, ENSMUST00000130986.8

Found 916 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTaGGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCGACTA +
Preference number: 1 (lower is better)
Translates to: GSWAGLRRQFFHRCN*AQPPAHLDNSAFRL
Trigger: TAGTCGGAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 90 bp CCTGCATGTGGAGGAGTGGTTTCCTGTGCAGAGCAGCATGCTGCCTaGCTGTATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: PACGGVVSCAEQHAA*LYPLRGAAAQLSSA
Trigger: GGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATACAGGCAGGCAGCATGCTGCTCTGCACAGGAAACCACTCCTCCACATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 90 bp ATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTaGAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTC +
Preference number: 1 (lower is better)
Translates to: IAGSWAGLRRQFFHR*NCAQPPAHLDNSAF
Trigger: GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 90 bp CGAATCACCTGCATGTGGAGGAGTGGTTTCCTGTGCAGAGCAGCATaGTGCCTGCCTGTATCCACTCAGAGGGGCAGCAGCTCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: RITCMWRSGFLCRAA*CLPVSTQRGSSSAQ
Trigger: CTGAGCTGAGCTGCTGCCCCTCTGAGTGGATACAGGCAGGCAGCATGCTGCTCTGCACAGGAAACCACTCCTCCACATGCAGGTGATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp GTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTaGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGG +
Preference number: 1 (lower is better)
Translates to: VPGILGQEAKVPVTT*EDYVSEEGCVGTGW
Trigger: CCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
3UTR GCA 90 bp GTCCTTGGGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTaGAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATAGC +
Preference number: 1 (lower is better)
Translates to: VLGTQLHRLCGALPL*RGRGIKGDWSHLDS
Trigger: GCTATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCCCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 90 bp TGCCTGCCTGTATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTaGCATGCAGTCTTCTCAGTGTACATGGTGAGCATCCACGAAGAA +
Preference number: 1 (lower is better)
Translates to: CLPVSTQRGSSSAQL*HAVFSVYMVSIHEE
Trigger: TTCTTCGTGGATGCTCACCATGTACACTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATACAGGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp TCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTaGATAGCAAGAGGCAGAGAGGAGACACTGCTCCTCACTGATGAC +
Preference number: 1 (lower is better)
Translates to: SHCAEEEGSKGTGPI*IARGREETLLLTDD
Trigger: GTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCCTCTTGCTATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 90 bp GCAGTTTCAGTTACCATGGCTAGAACTGCAGCTCAGCTGGTAGACTaGTGGTCCAACACTCTGAGTTCACACCCCACAACATACATCAGG +
Preference number: 1 (lower is better)
Translates to: AVSVTMARTAAQLVD*WSNTLSSHPTTYIR
Trigger: CCTGATGTATGTTGTGGGGTGTGAACTCAGAGTGTTGGACCAGCAGTCTACCAGCTGAGCTGCAGTTCTAGCCATGGTAACTGAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp CTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATaGGCAATGCTTGACTCCTGTCTCTTCCCTCTTAAATGCTCTGAA +
Preference number: 1 (lower is better)
Translates to: LSGVCQSAEPLRGQQ*AMLDSCLFPLKCSE
Trigger: TTCAGAGCATTTAAGAGGGAAGAGACAGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR TCA 90 bp TACCCTCCTGCCCTGAAACCCATCAGTTCCACCTCCACTAAGGATTaGGTCAATTGTGAAGGACAAGGTGGGGGAGAGAAAGGTCAAAGA +
Preference number: 1 (lower is better)
Translates to: YPPALKPISSTSTKD*VNCEGQGGGEKGQR
Trigger: TCTTTGACCTTTCTCTCCCCCACCTTGTCCTTCACAATTGACTCAATCCTTAGTGGAGGTGGAACTGATGGGTTTCAGGGCAGGAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp GTTTCAGTTACCATGGCTAGAACTGCAGCTCAGCTGGTAGACTGCTaGTCCAACACTCTGAGTTCACACCCCACAACATACATCAGGTGT +
Preference number: 1 (lower is better)
Translates to: VSVTMARTAAQLVDC*SNTLSSHPTTYIRC
Trigger: ACACCTGATGTATGTTGTGGGGTGTGAACTCAGAGTGTTGGACCAGCAGTCTACCAGCTGAGCTGCAGTTCTAGCCATGGTAACTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 90 bp TCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGTTCTTACTCTaGAACCCCAGCTGGCCTAGAACTCACGATGTTCCTGTCTCAACT +
Preference number: 1 (lower is better)
Translates to: SFTFPPTCPRERFLL*NPSWPRTHDVPVST
Trigger: AGTTGAGACAGGAACATCGTGAGTTCTAGGCCAGCTGGGGTTGCAGAGTAAGAACCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp CCTCCCACTTGCCCTAGAGAAAGGTTCTTACTCTGCAACCCCAGCTaGCCTAGAACTCACGATGTTCCTGTCTCAACTTCTCTAATGTTA +
Preference number: 1 (lower is better)
Translates to: PPTCPRERFLLCNPS*PRTHDVPVSTSLML
Trigger: TAACATTAGAGAAGTTGAGACAGGAACATCGTGAGTTCTAGGCCAGCTGGGGTTGCAGAGTAAGAACCTTTCTCTAGGGCAAGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 90 bp GCTGGGAAGATTAATCAATTGTTAACTTGTCCTACCCTCCTGCCCTaGAACCCATCAGTTCCACCTCCACTAAGGATTGAGTCAATTGTG +
Preference number: 1 (lower is better)
Translates to: AGKINQLLTCPTLLP*NPSVPPPLRIESIV
Trigger: CACAATTGACTCAATCCTTAGTGGAGGTGGAACTGATGGGTTTCAGGGCAGGAGGGTAGGACAAGTTAACAATTGATTAATCTTCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 90 bp CTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTaGAATGAAAGAGGCCAACTCACTTTGAGTAGAGTGGCAACAATA +
Preference number: 1 (lower is better)
Translates to: LLLNSLGIKSCGEVP*NERGQLTLSRVATI
Trigger: TATTGTTGCCACTCTACTCAAAGTGAGTTGGCCTCTTTCATTCCAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR CCA 90 bp TCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTaGCTAGTAAGATTAATCCTCTGGGAACATGACAGAAGTGACCAT +
Preference number: 1 (lower is better)
Translates to: SMTACSRIFSTCQTH*LVRLILWEHDRSDH
Trigger: ATGGTCACTTCTGTCATGTTCCCAGAGGATTAATCTTACTAGCCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR TCA 90 bp GGTGTACCTTGTACAGCAGTGAAACAAGAATGGCTCCAAACTCAGTaGTCTAATCTTGGGTTTCAAAAGTTTACTCAAACTATAAACACT +
Preference number: 1 (lower is better)
Translates to: GVPCTAVKQEWLQTQ*SNLGFQKFTQTINT
Trigger: AGTGTTTATAGTTTGAGTAAACTTTTGAAACCCAAGATTAGATCACTGAGTTTGGAGCCATTCTTGTTTCACTGCTGTACAAGGTACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACCTACCCTCCTGCCCTaGAACCCATCAGTTCCACCT +
Preference number: 2 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIPTLLP*NPSVPP
Trigger: AGGTGGAACTGATGGGTTTCAGGGCAGGAGGGTAGG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTGCAGAGAGGAGACACTaGTCCTCACTGATGACGACA +
Preference number: 2 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIAERRH*SSLMTT
Trigger: TGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGC...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATAAGCACTCTTTACAGGTaGGGGCAGGAGGACCCCCAA +
Preference number: 2 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWISTLYR*GQEDPQ
Trigger: TTGGGGGTCCTCCTGCCCCCACCTGTAAAGAGTGCT...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGGTCAGTGAAGAGGGCTaGGTGGGGACTGGGTGGACC +
Preference number: 2 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVVSEEG*VGTGWT
Trigger: GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGAC...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
3UTR-3UTR GCA 90 bp TGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTTCTAGTCAGTGAAGAGGGCTaGGTGGGGACTGGGTGGACC +
Preference number: 2 (lower is better)
Translates to: CSPSGVEYRPWGIQELLLVSEEG*VGTGWT
Trigger: GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGAC...TAGAAGTAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCTTGTCCTACCCTCCTaGCCTGAAACCCATCAGTTC +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQLVLPS*PETHQF
Trigger: GAACTGATGGGTTTCAGGGCAGGAGGGTAGGACAAG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGCAGAGAGGAGACACTaGTCCTCACTGATGACGACA +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQAERRH*SSLMTT
Trigger: TGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTACGTGGGAAAACTCATaGTTTGTGCTGGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPITWENS*FVLGCP
Trigger: AGGACAGCCCAGCACAAACCATGAGTTTTCCCACGT...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGAGCACTCTTTACAGGTaGGGGCAGGAGGACCCCCAA +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKSTLYR*GQEDPQ
Trigger: TTGGGGGTCCTCCTGCCCCCACCTGTAAAGAGTGCT...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGGATTGAGTCAATTGTaGAGGACAAGGTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQGLSQL*RTRWGR
Trigger: TCTCCCCCACCTTGTCCTTCACAATTGACTCAATCC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGCCTACCCTCCTGCCCTaGAACCCATCAGTTCCACCT +
Preference number: 2 (lower is better)
Translates to: GREETLLLTDDDTLNVRMPTLLP*NPSVPP
Trigger: AGGTGGAACTGATGGGTTTCAGGGCAGGAGGGTAGG...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTGTCAGTGAAGAGGGCTaGGTGGGGACTGGGTGGACC +
Preference number: 2 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVVSEEG*VGTGWT
Trigger: GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGAC...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp CTAAGTGAGGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGCTTAGTCCTGACATTTaGACAGCTCTCTGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: LSEATGHLDGAQQDHTPQLSPDI*TALWFE
Trigger: TTCAAACCAGAGAGCTGTTCAAATGTCAGGACTAAG...CTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCCTCACTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR GCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTACATTCCCTCCCACTTaGCCTAGAGAAAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPITFPPT*PRERFL
Trigger: TAAGAACCTTTCTCTAGGGCAAGTGGGAGGGAATGT...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGCATCTACGAGTCTaGAAGCTACCACCCACAATT +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKGHLRV*KLPPTI
Trigger: AATTGTGGGTGGTAGCTTCCAGACTCGTAGATGCCC...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCAGAACTTCAAGAGCTaGTTTTCCATTCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQQNFKS*FSILGT
Trigger: TGTGCCCAGAATGGAAAACCAGCTCTTGAAGTTCTG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CAA 90 bp AGCATCCACGAAGAATGTAGAAGTGTTTCCAGCACTGGCTTCACTTaGAGCTTCCCTCCCTCCCCTCCCCTGTTGTGTATTCTGCACACA +
Preference number: 2 (lower is better)
Translates to: SIHEECRSVSSTGFT*SFPPSPPLLCILHT
Trigger: TGTGTGCAGAATACACAACAGGGGAGGGGAGGGAGGGAAGCTCAAAGTGAAGCCAGTGCTGGAAACACTTCTACATTCTTCGTGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGGAGGACTATGTCAGTaGAGAGGGCTGCGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEGGLCQ*RGLRGD
Trigger: GTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCC...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGATAGAAGAGCAGTGGTaGCCATGTGAAGAAAATAGG +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQIEEQW*PCEENR
Trigger: CCTATTTTCTTCACATGGTCACCACTGCTCTTCTAT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGGATTGAGTCAATTGTaGAGGACAAGGTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GREETLLLTDDDTLNVRMGLSQL*RTRWGR
Trigger: TCTCCCCCACCTTGTCCTTCACAATTGACTCAATCC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGAATGCTGATCATTTTTaGGATGCTGGTATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQNADHF*DAGMLG
Trigger: TCCCAGCATACCAGCATCTCAAAAATGATCAGCATT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACAGAACTTCAAGAGCTaGTTTTCCATTCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIQNFKS*FSILGT
Trigger: TGTGCCCAGAATGGAAAACCAGCTCTTGAAGTTCTG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CAA 90 bp TCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAGATTaGGTACAAACATTGCCCCATCCCACTGAGAAGCTTCCAAACCCA +
Preference number: 2 (lower is better)
Translates to: SMKQAASPPSSSFPD*VQTLPHPTEKLPNP
Trigger: TGGGTTTGGAAGCTTCTCAGTGGGATGGGGCAATGTTTGTACCAAATCTGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR TCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATATGGCTCCAAACTCAGTaGTCTAATCTTGGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIWLQTQ*SNLGFQ
Trigger: TTGAAACCCAAGATTAGATCACTGAGTTTGGAGCCA...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCTCTTCCCTCTTAAATaGTCTGAACTGAATCTTTCT +
Preference number: 2 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTLFPLK*SELNLS
Trigger: AGAAAGATTCAGTTCAGAGCATTTAAGAGGGAAGAG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCATGTCCCTGATGCATaGTGTATTTTGAATGCTGAT +
Preference number: 2 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQHVPDA*CILNAD
Trigger: ATCAGCATTCAAAATACAGCATGCATCAGGGACATG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTGGGCATCTACGAGTCTaGAAGCTACCACCCACAATT +
Preference number: 2 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTGHLRV*KLPPTI
Trigger: AATTGTGGGTGGTAGCTTCCAGACTCGTAGATGCCC...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTTGTGGAGAAGTCCCTTaGAATGAAAGAGGCCAACTC +
Preference number: 2 (lower is better)
Translates to: ALGLGFSILASLGVCSPSCGEVP*NERGQL
Trigger: GAGTTGGCCTCTTTCATTCCAAGGGACTTCTCCACA...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR CCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACATGCATTGCTGGGAGCTaGGCGGGCCTCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: KELSNIFAQSDTLASLLTCIAGS*AGLRRQ
Trigger: CTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATGCA...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR TCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGATCTGAGCAGCAGATaGCCTTCAAAATTCAAACCT +
Preference number: 2 (lower is better)
Translates to: GREETLLLTDDDTLNVRMDLSSR*PSKFKP
Trigger: AGGTTTGAATTTTGAAGGTCATCTGCTGCTCAGATC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACAGATGAAGATGAACTaGGTTGTAATCAATCTTCAG +
Preference number: 2 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIQMKMN*VVINLQ
Trigger: CTGAAGATTGATTACAACTCAGTTCATCTTCATCTG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTACATTCCCTCCCACTTaGCCTAGAGAAAGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTTFPPT*PRERFL
Trigger: TAAGAACCTTTCTCTAGGGCAAGTGGGAGGGAATGT...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCTTGAACCCTATACTTaGCAGGTTTTTCCCTATTCT +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLEPYT*QVFPYS
Trigger: AGAATAGGGAAAAACCTGCCAAGTATAGGGTTCAAG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CAA 90 bp ACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTaGTGTGTCTTTGTATGTAATGGGTTAAACAATACTTCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: TTHLRPSPLCHLDPT*CVFVCNGLNNTSKE
Trigger: TTCCTTGGAAGTATTGTTTAACCCATTACATACAAAGACACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACATGAAGTTCTGGGTTTaGTCCCCAGCACCACATGCC +
Preference number: 2 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNMKFWV*SPAPHA
Trigger: GGCATGTGGTGCTGGGGATCAAACCCAGAACTTCAT...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCAGATGAAGATGAACTaGGTTGTAATCAATCTTCAG +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKQMKMN*VVINLQ
Trigger: CTGAAGATTGATTACAACTCAGTTCATCTTCATCTG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCTGTATTTTGAATGCTaGTCATTTTTGAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLYFEC*SFLRCW
Trigger: CCAGCATCTCAAAAATGATCAGCATTCAAAATACAG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACACAGTTCTTCCACCGCTaGAATTGCGCACAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: KELSNIFAQSDTLASLLTQFFHR*NCAQPP
Trigger: TGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTG...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR GCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGTTAATTAGTTCACAATaGTGCTGTTGTAGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLISSQ*CCCRAA
Trigger: AGCAGCTCTACAACAGCAGCATTGTGAACTAATTAA...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCTCTGCAACCCCAGCTaGCCTAGAACTCACGATGTT +
Preference number: 2 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERLCNPS*PRTHDV
Trigger: AACATCGTGAGTTCTAGGCCAGCTGGGGTTGCAGAG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR TCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGTTCTCCATACATACATaGTTCCACTCACTGGTCATC +
Preference number: 2 (lower is better)
Translates to: YGTATELLRNQVLWRSPLFSIHT*FHSLVI
Trigger: GATGACCAGTGAGTGGAATCATGTATGTATGGAGAA...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCTGGCTCCAAACTCAGTaGTCTAATCTTGGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPWLQTQ*SNLGFQ
Trigger: TTGAAACCCAAGATTAGATCACTGAGTTTGGAGCCA...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGTTAATTAGTTCACAATaGTGCTGTTGTAGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GREETLLLTDDDTLNVRMLISSQ*CCCRAA
Trigger: AGCAGCTCTACAACAGCAGCATTGTGAACTAATTAA...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGCAGTCATTTTAGGATaGTTTTCTATGGCACTGCTA +
Preference number: 2 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQAVILG*FSMALL
Trigger: TAGCAGTGCCATAGAAAAGCATCCTAAAATGACTGC...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGGATCTGAGCAGCAGATaGCCTTCAAAATTCAAACCT +
Preference number: 2 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERDLSSR*PSKFKP
Trigger: AGGTTTGAATTTTGAAGGTCATCTGCTGCTCAGATC...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CAA 90 bp TCTAATCTTGGGTTTCAAAAGTTTACTCAAACTATAAACACTGATTaGAAATCTGGGGCATCTACGAGTCTGGAAGCTACCACCCACAAT +
Preference number: 2 (lower is better)
Translates to: SNLGFQKFTQTINTD*KSGASTSLEATTHN
Trigger: ATTGTGGGTGGTAGCTTCCAGACTCGTAGATGCCCCAGATTTCAAATCAGTGTTTATAGTTTGAGTAAACTTTTGAAACCCAAGATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGAGGCTAACAAGAATGTaGCATGTTCATATTATTACG +
Preference number: 2 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERRLTRM*HVHIIT
Trigger: CGTAATAATATGAACATGGCACATTCTTGTTAGCCT...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACAGGCTAACAAGAATGTaGCATGTTCATATTATTACG +
Preference number: 2 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNRLTRM*HVHIIT
Trigger: CGTAATAATATGAACATGGCACATTCTTGTTAGCCT...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CCA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGGTAAGATTAATCCTCTaGGAACATGACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWVRLIL*EHDRSD
Trigger: GTCACTTCTGTCATGTTCCCAGAGGATTAATCTTAC...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR TCA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCACTTAGTCCTGACATTTaGACAGCTCTCTGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: ILTDFTFEMCWALKSSSALSPDI*TALWFE
Trigger: TTCAAACCAGAGAGCTGTTCAAATGTCAGGACTAAG...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR CCA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTAGTAAGATTAATCCTCTaGGAACATGACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVVRLIL*EHDRSD
Trigger: GTCACTTCTGTCATGTTCCCAGAGGATTAATCTTAC...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR GCA 72 bp AGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTaGAATTGCGCACAGCCCCCAGCTCACCTCGACAAT +
Preference number: 3 (lower is better)
Translates to: SWAGLRRQFFHR*NCAQPPAHLDN
Trigger: ATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR CAA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGAACTGGTCGCCTTGTaGACCCCCTGGGGGACTCCC +
Preference number: 3 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQELVAL*TPWGTP
Trigger: GGGAGTCCCCCAGGGGGTCAACAAGGCGACCAGTTC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CAA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGAGAACTGGTCGCCTTGTaGACCCCCTGGGGGACTCCC +
Preference number: 3 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGELVAL*TPWGTP
Trigger: GGGAGTCCCCCAGGGGGTCAACAAGGCGACCAGTTC...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 72 bp GCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTaGGCACAGCCCCCAGCTCACCTCGACAATAGTGCT +
Preference number: 3 (lower is better)
Translates to: AGLRRQFFHRCN*AQPPAHLDNSA
Trigger: AGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 72 bp AGTGGGGAGACAGGGCCAGAGTCCTTGGGACACAGTTaGATAGACTGTGTGGTGCCCTCCCACTGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SGETGPESLGHS*IDCVVPSHCAE
Trigger: CTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCCCAAGGACTCTGGCCCTGTCTCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 72 bp CACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATaGAGTCTTCTCAGTGTACATGGTGAGCATCCACGA +
Preference number: 3 (lower is better)
Translates to: HSEGQQLSSALP*SLLSVHGEHPR
Trigger: TCGTGGATGCTCACCATGTACACTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp ATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTaGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGG +
Preference number: 3 (lower is better)
Translates to: ILGQEAKVPVTT*EDYVSEEGCVG
Trigger: CCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
3UTR-3UTR CAA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTTAGTTCCTGGGATTTaGGGTCAGGAGGCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVLVPGI*GQEAKV
Trigger: AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAA...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR TCA 72 bp AGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATaGAGCAGGCTGCTTCACCACCATCCTCTTCGTTTC +
Preference number: 3 (lower is better)
Translates to: RGNRGDTAVILP*SRLLHHHPLRF
Trigger: GAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 72 bp CTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTaGAGAGCCACTCAGAGGGCAGCAATGGGCAATGCT +
Preference number: 3 (lower is better)
Translates to: LPNPSPIWSLSV*RATQRAAMGNA
Trigger: AGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 72 bp ACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTaGAGAGGAAGAGGGATCAAAGGGGACTGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: TQLHRLCGALPL*RGRGIKGDWSH
Trigger: ATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 72 bp GTATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTaGCATGCAGTCTTCTCAGTGTACATGGTGAGCATC +
Preference number: 3 (lower is better)
Translates to: VSTQRGSSSAQL*HAVFSVYMVSI
Trigger: GATGCTCACCATGTACACTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp CATCCCACTGAGAAGCTTCCAAACCCATCGCCTATCTaGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: HPTEKLPNPSPI*SLSVCRATQRA
Trigger: TGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTCTCAGTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CCA 72 bp GCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTaGATAGCAAGAGGCAGAGAGGAGACACTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: AEEEGSKGTGPI*IARGREETLLL
Trigger: GAGGAGCAGTGTCTCCTCTCTGCCTCTTGCTATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp CTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTaGTCCCATTTGGATAGCAAGAGGCAGAGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: LPLCRGRGIKGD*SHLDSKRQRGD
Trigger: GTCTCCTCTCTGCCTCTTGCTATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CAA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACATGAAGTTCTGGGTTaGATCCCCAGCACCACATGC +
Preference number: 3 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIHEVLG*IPSTTC
Trigger: GCATGTGGTGCTGGGGATCAAACCCAGAACTTCATG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 72 bp CACCTCGACAATAGTGCTTTCCGACTAGGACAGCACTaGGGAAAGCCCCTGGATAGACGGAAGCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: HLDNSAFRLGQH*GKPLDRRKQRW
Trigger: CCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTCAGTGCTGTCCTAGTCGGAAAGCACTATTGTCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR GCA 72 bp AATCGAATCACCTGCATGTGGAGGAGTGGTTTCCTGTaGAGAGCAGCATGCTGCCTGCCTGTATCCACTCAG +
Preference number: 3 (lower is better)
Translates to: NRITCMWRSGFL*RAACCLPVSTQ
Trigger: CTGAGTGGATACAGGCAGGCAGCATGCTGCTCTGCACAGGAAACCACTCCTCCACATGCAGGTGATTCGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 72 bp GGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTaGTTCACCACCATCCTCTTCGTTTCCAGATTTGGT +
Preference number: 3 (lower is better)
Translates to: GATQQLSFHEAG*FTTILFVSRFG
Trigger: ACCAAATCTGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CCA 72 bp GTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATaGGCAATGCTTGACTCCTGTCTCTTCCCTCTTAAA +
Preference number: 3 (lower is better)
Translates to: VCQSAEPLRGQQ*AMLDSCLFPLK
Trigger: TTTAAGAGGGAAGAGACAGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CCA 72 bp CTGTTTGTGAAATCGAATCACCTGCATGTGGAGGAGTaGTTTCCTGTGCAGAGCAGCATGCTGCCTGCCTGT +
Preference number: 3 (lower is better)
Translates to: LFVKSNHLHVEE*FPVQSSMLPAC
Trigger: ACAGGCAGGCAGCATGCTGCTCTGCACAGGAAACCACTCCTCCACATGCAGGTGATTCGATTTCACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CAA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTACTATAAACACTGATTaGAAATCTGGGGCATCTACG +
Preference number: 3 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPITINTD*KSGAST
Trigger: CGTAGATGCCCCAGATTTCAAATCAGTGTTTATAGT...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CAA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGACTATAAACACTGATTaGAAATCTGGGGCATCTACG +
Preference number: 3 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQTINTD*KSGAST
Trigger: CGTAGATGCCCCAGATTTCAAATCAGTGTTTATAGT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 72 bp AAGAATGTAGAAGTGTTTCCAGCACTGGCTTCACTTTaGGCTTCCCTCCCTCCCCTCCCCTGTTGTGTATTC +
Preference number: 3 (lower is better)
Translates to: KNVEVFPALASL*ASLPPLPCCVF
Trigger: GAATACACAACAGGGGAGGGGAGGGAGGGAAGCTCAAAGTGAAGCCAGTGCTGGAAACACTTCTACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp AGGCTGCTTCACCACCATCCTCTTCGTTTCCAGATTTaGTACAAACATTGCCCCATCCCACTGAGAAGCTTC +
Preference number: 3 (lower is better)
Translates to: RLLHHHPLRFQI*YKHCPIPLRSF
Trigger: GAAGCTTCTCAGTGGGATGGGGCAATGTTTGTACCAAATCTGGAAACGAAGAGGATGGTGGTGAAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CCA 72 bp TGCCCTAGAGAAAGGTTCTTACTCTGCAACCCCAGCTaGCCTAGAACTCACGATGTTCCTGTCTCAACTTCT +
Preference number: 3 (lower is better)
Translates to: CPRERFLLCNPS*PRTHDVPVSTS
Trigger: AGAAGTTGAGACAGGAACATCGTGAGTTCTAGGCCAGCTGGGGTTGCAGAGTAAGAACCTTTCTCTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR GCA 72 bp CTCAAACTACTCAACTGCCTACAGCGCACTAAGGCCTaGCACAATGCAGTAGAGCATGCTAATTTACTGCAT +
Preference number: 3 (lower is better)
Translates to: LKLLNCLQRTKA*HNAVEHANLLH
Trigger: ATGCAGTAAATTAGCATGCTCTACTGCATTGTGGCAGGCCTTAGTGCGCTGTAGGCAGTTGAGTAGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 72 bp ATTAATCAATTGTTAACTTGTCCTACCCTCCTGCCCTaGAACCCATCAGTTCCACCTCCACTAAGGATTGAG +
Preference number: 3 (lower is better)
Translates to: INQLLTCPTLLP*NPSVPPPLRIE
Trigger: CTCAATCCTTAGTGGAGGTGGAACTGATGGGTTTCAGGGCAGGAGGGTAGGACAAGTTAACAATTGATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp ACATGTCAAACCCATTGGCTAGTAAGATTAATCCTCTaGGAACATGACAGAAGTGACCATTTCAGGCCCCTA +
Preference number: 3 (lower is better)
Translates to: TCQTHWLVRLIL*EHDRSDHFRPL
Trigger: TAGGGGCCTGAAATGGTCACTTCTGTCATGTTCCCAGAGGATTAATCTTACTAGCCAATGGGTTTGACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR CCA 72 bp AATTCTCACTTTGATGAGAATACTGCTGTAGGTGTATaGTCAGCACGATTACTCACCATGGGATCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: NSHFDENTAVGV*SARLLTMGSEQ
Trigger: CTGCTCAGATCCCATGGTGAGTAATCGTGCTGACCATACACCTACAGCAGTATTCTCATCAAAGTGAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR-3UTR CAA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGTTAGTTCCTGGGATTTaGGGTCAGGAGGCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWLVPGI*GQEAKV
Trigger: AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAA...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR-3UTR CAA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCCTCAGTGATCTAATCTaGGGTTTCAAAAGTTTACTC +
Preference number: 3 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPLSDLI*GFKSLL
Trigger: GAGTAAACTTTTGAAACCCAAGATTAGATCACTGAG...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 72 bp GATGGCTACACAGGGAAAGCTAGCTCTAAGGTCCACTaGAATCCCCTTAAAACTTACACCAGTCAAGTTATT +
Preference number: 3 (lower is better)
Translates to: DGYTGKASSKVH*NPLKTYTSQVI
Trigger: AATAACTTGACTGGTGTAAGTTTTAAGGGGATTTCAGTGGACCTTAGAGCTAGCTTTCCCTGTGTAGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR-3UTR CAA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGATTTGGTACAAACATaGCCCCATCCCACTGAGAAG +
Preference number: 3 (lower is better)
Translates to: KELSNIFAQSDTLASLLTDLVQT*PHPTEK
Trigger: CTTCTCAGTGGGATGGGGCAATGTTTGTACCAAATC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR TCA 72 bp TGGTCTAGAAACATGTCCCTGATGCATGCTGTATTTTaGATGCTGATCATTTTTGAGATGCTGGTATGCTGG +
Preference number: 3 (lower is better)
Translates to: WSRNMSLMHAVF*MLIIFEMLVCW
Trigger: CCAGCATACCAGCATCTCAAAAATGATCAGCATTCAAAATACAGCATGCATCAGGGACATGTTTCTAGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR TCA 72 bp GTACAAAAAGTAAGAAAGGTGTACCTTGTACAGCAGTaGAACAAGAATGGCTCCAAACTCAGTGATCTAATC +
Preference number: 3 (lower is better)
Translates to: VQKVRKVYLVQQ*NKNGSKLSDLI
Trigger: GATTAGATCACTGAGTTTGGAGCCATTCTTGTTTCACTGCTGTACAAGGTACACCTTTCTTACTTTTTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CCA 72 bp GCATGTTCAAGAATATTTAGCACATGTCAAACCCATTaGCTAGTAAGATTAATCCTCTGGGAACATGACAGA +
Preference number: 3 (lower is better)
Translates to: ACSRIFSTCQTH*LVRLILWEHDR
Trigger: TCTGTCATGTTCCCAGAGGATTAATCTTACTAGCCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
3UTR TCA 72 bp AACAAAACCTATGGAGTCCTGTGTTTCAATGGACAGTaGTATAACACTCTGCAATACAAAATACAATGTACA +
Preference number: 3 (lower is better)
Translates to: NKTYGVLCFNGQ*YNTLQYKIQCT
Trigger: TGTACATTGTATTTTGTATTGCAGAGTGTTATATCACTGTCCATTGAAACACAGGACTCCATAGGTTTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTGCCCGTCGGCCTCATaGCCCTGTCCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLCPSAS*PCPGPA
Trigger: TGCTGGGCCTGGACAGGGCCATGAGGCCGACGGGCA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCGGTGCTGGCCTGGCTaGGCCATCCCCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTRCWPG*AIPSCR
Trigger: CCTACAGCTGGGGATGGCGCAGCCAGGCCAGCACCG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGGTGCCCTGTTCCCCATaGACTGGGCCTGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLVPCSP*TGPDLA
Trigger: GGCCAGATCAGGCCCAGTTCATGGGGAACAGGGCAC...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCATGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSCCCGC*SLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCA...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCAGTCTTCAAATTGGGCTaGTGCTCCTCCTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSVFKLG*CSSSGP
Trigger: GGGCCCCGAGGAGGAGCACCAGCCCAATTTGAAGAC...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAGTCCAGGCCCAGCACTaGAAGGCAGAGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTVQAQH*KAEQWL
Trigger: CAGCCACTGCTCTGCCTTCCAGTGCTGGGCCTGGAC...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACACTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTLPWRL*LCTTHS
Trigger: TGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAG...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCCTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTLPWRL*LCTTHS
Trigger: TGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAG...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIWDTGP*LASGSC
Trigger: GCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCA...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGAGGCTGGCGGCAGATaGAGTACAGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTEAGGR*STGHWG
Trigger: ACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCACTCCTTGGCTTCTGCTaGCAGCCCAGGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAALLGFC*QPRPLD
Trigger: GTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAG...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTCAAATGCCCGGCCCTaGCGGCTTTCCAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLSNARP*RLSNPW
Trigger: CCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCATCCTCAGTGGCAGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSSSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCTGCCACTGAGGA...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCAACCAGGCCTAGGCTGTaGCTCTCTGCTGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSTRPRL*LSAVLH
Trigger: ATGGAGGACAGCAGAGAGCCACAGCCTAGGCCTGGT...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAGGGTGCAGGGCCCCTTaGTCCTCCATATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAGCRAP*SSIWQG
Trigger: CCCCTGCCATATGGAGGACCAAGGGGCCCTGCACCC...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACGGCTTTCCAACCCTTaGGCTTCAGGCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSRLSNP*ASGSSR
Trigger: TCTGGACGAGCCTGAAGCCCAAGGGTTGGAAAGCCG...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLFLRRF*LPLRDL
Trigger: GAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CTAAGTGAGGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LSEATGHLDGAQQDHTPQFLRRF*LPLRDL
Trigger: GAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA...CTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCCTCACTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGWDTGP*LASGSC
Trigger: GCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCA...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCATAGGTGTTGGTCCTaGCTGCCTGGCAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLHRCWS*LPGRSA
Trigger: GGCACTTCTGCCAGGCAGGCAGGACCAACACCTATG...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCATTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSLCCCG*CSLGST
Trigger: GGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAA...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCAATTCTCTGTGTTTTCTaGAGCGAGCCGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSILCVF*SEPPGL
Trigger: CAGGCCAGGCGGCTCGCTGCAGAAAACACAGAGAAT...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCATTATCCCACTCCCGATaGCGGTCCCAGTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAALSHSR*RSQSRL
Trigger: GAGCCGGGACTGGGACCGGCATCGGGAGTGGGATAA...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGCCCACCAAAGAGGCTaGAGGAAGTGCTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTAHQRG*RKCFLR
Trigger: CCGAAGAAAGCACTTCCTTCAGCCTCTTTGGTGGGC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGACCAAGCCGGTACCCTTGAAGCCTaGAGGCAGTTTCTTAATGGC +
Preference number: 4 (lower is better)
Translates to: GHRTPRWRSAGPHTSDQAGTLEA*RQFLNG
Trigger: GCCATTAAGAAACTGCCTTCAGGCTTCAAGGGTACC...GGCTTGGTCTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGACCAAGCCCGATGGAAGAGCCCCTaGTTCTTAGGATCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GHRTPRWRSAGPHTSDQARWKSP*FLGSLR
Trigger: CCTTAAGGATCCTAAGAATCAGGGGCTCTTCCATCG...GGCTTGGTCTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCWDTGP*LASGSC
Trigger: GCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCA...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATTGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYWDTGP*LASGSC
Trigger: GCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCA...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACGGGAATTTTCAAACTaGCTAGGATGGGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSREFSN*LGWGPR
Trigger: ACGTGGGCCCCATCCTAGTCAGTTTGAAAATTCCCG...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGACCAAGCCCAGAATCTTCCTCTCTaGGCTTCTTCCTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GHRTPRWRSAGPHTSDQAQNLPL*ASSSGD
Trigger: ATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTG...GGCTTGGTCTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTTCTCTCTGCTCTTGCTaGGGTCCTTCCGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPSLCSC*GPSGPG
Trigger: GCCGGGACCGGAAGGACCGCAGCAAGAGCAGAGAGA...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCTTGGTCCTGCCTGCCTaGCAGAAGTGCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFLVLPA*QKCLTG
Trigger: CCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAA...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCTTGGTCCTGCCTGCCTaGCAGAAGTGCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCLVLPA*QKCLTG
Trigger: CCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAA...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTAGGACCAAGCCGTCCTaGGGCTGGAGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPRTKPS*GWRSSR
Trigger: CCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATAGGACCAAGCCGTCCTaGGGCTGGAGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYRTKPS*GWRSSR
Trigger: CCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCT...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGACCAAGCCAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTT +
Preference number: 4 (lower is better)
Translates to: GHRTPRWRSAGPHTSDQARMAIA*RLRETL
Trigger: AAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCT...GGCTTGGTCTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACATGCAGTGGGCTTCTCTaGCTTCTCTGGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTCSGLL*LLWLHS
Trigger: GCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCA...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIWARVQ*ASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCA...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACACAGAAAAGTGTGCCATaGACACACCCACAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTQKSVP*THPQQP
Trigger: GGGCTGCTGTGGGTGTGTCCATGGCACACTTTTCTG...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACACAGACTGAGCACCCCTaGGGTCCTCATATTGGGATG +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTQTEHP*GPHIGM
Trigger: CATCCCAATATGAGGACCCCAGGGGTGCTCAGTCTG...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTAGGATGGGGCCCACGTaGGCCCACGAAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTRMGPT*AHEMTR
Trigger: CCTGGTCATTTCGTGGGCCCACGTGGGCCCCATCCT...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGCTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: GQEAKVPVTTWEDYVSEELPWRL*LCTTHS
Trigger: TGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAG...CTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCCTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVLPWRL*LCTTHS
Trigger: TGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAG...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQFLRRF*LPLRDL
Trigger: GAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTTGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCWDTGP*LASGSC
Trigger: GCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCA...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGCTTCTGGCTGGCAGTaGGCTGCTGGCTACTATCAG +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQASGWQ*AAGYYQ
Trigger: CTGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCCATAGGTGTTGGTCCTaGCTGCCTGGCAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCHRCWS*LPGRSA
Trigger: GGCACTTCTGCCAGGCAGGCAGGACCAACACCTATG...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGGTTGTCCAGATGGGCTaGCATGGAGGCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVVVQMG*HGGCDC
Trigger: ACAGTCACAGCCTCCATGGCAGCCCATCTGGACAAC...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCGAGGCTGGCGGCAGATaGAGTACAGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASEAGGR*STGHWG
Trigger: ACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTC...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQAALTG*LLPRSL
Trigger: GAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGPRMVC*SHRLPP
Trigger: AGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGG...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIPRMVC*SHRLPP
Trigger: AGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLVVVVT*PGWCAA
Trigger: AGCAGCACACCATCCTGGGCAAGTGACCACAACTAC...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATGGGTAGCAGCACTCTaGGGGGCGGTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPWVAAL*GAVLAW
Trigger: CCAGGCCAGCACCGCCCCGCAGAGTGCTGCTACCCA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGTCACTTGCCCAGGATaGTGTGCTGCTCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQVTCPG*CAALTG
Trigger: GCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGAC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACGGGGCTCCCTGACTTaGGTCTGGGGCTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSRGSLT*VWGLLF
Trigger: GAACAGCAAGCCCCAGACCCAAGTCAGGGAGCCCCG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCATGGAAGGCAGAGCAGTaGCTGGGCCTGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSWKAEQ*LGLPHP
Trigger: GGGATGAGGCAGGCCCAGCCACTGCTCTGCCTTCCA...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GCAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTCCAGTTTGGTTTCTaGAGCCTGGGAGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGPHTSDQALCVIWTPPCVQFGF*SLGVVQ
Trigger: CTGGACAACTCCCAGGCTTCAGAAACCAAACTGGAC...ACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCTCCTTGGACACCGATaGCTTGAGTTTGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLLLGHR*LEFANV
Trigger: TACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAG...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVLSPHQ*LWKMWA
Trigger: AGCCCACATCTTCCACAGTCACTGATGTGGAGACAG...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVFLRRF*LPLRDL
Trigger: GAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATAAACCTGTTGTTGTaGGGCTGGCGGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTINLLL*GWRQMQ
Trigger: CTGCATCTGCCGCCAGCCTCACAACAACAGGTTTAT...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTCCAGGGAACAGCCATTaGCTCCTTGGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPPGNSH*LLGFCC
Trigger: GCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGG...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGGCTGGTTTGGCTCCTaGCATATTAGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTGWFGS*HIRVRR
Trigger: CCTCCTTACTCTAATATGGCAGGAGCCAAACCAGCC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCGTTGTCCAGATGGGCTaGCATGGAGGCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFVVQMG*HGGCDC
Trigger: ACAGTCACAGCCTCCATGGCAGCCCATCTGGACAAC...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCCTCCCAGAAACTGGGTaGTTACCTGGGCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCLPETG*LPGPSK
Trigger: CTTTGAGGGCCCAGGTAAGCACCCAGTTTCTGGGAG...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGTGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKCCCGC*SLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCA...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGLCCCG*CSLGST
Trigger: GGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAA...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCCGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCRRERL*CCGCCS
Trigger: TGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCG...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCAGCACCCACAGATCTaGACCCAGAGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQQHPQI*TQSPAH
Trigger: ATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQEAKVPVTTWEDYVSEEAALTG*LLPRSL
Trigger: GAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGC...CTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTCCCACAGCAGCCCTCTaGTGTCGGAGAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPPTAAL*CRRASS
Trigger: AGAAGAAGCTCTCCGACAGCAGAGGGCTGCTGTGGG...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTTTTGGGCCTTAGGTTaGAAAGGGAAGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLFWALG*KGKLGG
Trigger: TCCACCCAGCTTCCCTTTGCAACCTAAGGCCCAAAA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCCGACATCCCAAAAGTaGGTGGTGCAGGTTCACGCT +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFPTSQK*VVQVHA
Trigger: AGCGTGAACCTGCACCACGCACTTTTGGGATGTCGG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCGGCGAGTTCACTCTCTaGTCTTCGAACTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASGEFTL*SSNCWG
Trigger: GCCCCAGCAGTTCGAAGAGCAGAGAGTGAACTCGCC...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGTACTCTCCGGGTCTaGCTCAGAGGCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVCTLRV*LRGIFR
Trigger: CCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACA...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTT +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLRMAIA*RLRETL
Trigger: AAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCT...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGTCAGGAGAGGAGGATaGCTTAGCCAGTATGGACTT +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTVRRGG*LSQYGL
Trigger: AAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGAC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAGTCAGGAGAGGAGGATaGCTTAGCCAGTATGGACTT +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTVRRGG*LSQYGL
Trigger: AAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGAC...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: GPHTSDQALCVIWTPPCVGQEFG*HRVLST
Trigger: AGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCC...CACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCTCACCTCCCAGAAACTaGGTGCTTACCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVSPPRN*VLTWAL
Trigger: GAGGGCCCAGGTAAGCACCCAGTTTCTGGGAGGTGA...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVLPFMP*SSPDFC
Trigger: GCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAG...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTGTCACTTGCCCAGGATaGTGTGCTGCTCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPVTCPG*CAALTG
Trigger: GCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGAC...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCACTTGCCCAGGATaGTGTGCTGCTCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYVTCPG*CAALTG
Trigger: GCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGAC...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCWARVQ*ASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCA...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLWARVQ*ASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCA...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCCTCCCCCTTGGCCTTaGAATCCTGATGTGGAGATA +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTPPPWP*NPDVEI
Trigger: TATCTCCACATCAGGATTCCAAGGCCAAGGGGGAGG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCCAGCCATTGACTCCTTaGCTTCTGCTGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCQPLTP*LLLPAQ
Trigger: CTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTG...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCACAGCGTTTTCACCTaGAGCCCAGGGAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFHSVFT*SPGNSH
Trigger: ATGGCTGTTCCCTGGGCTCCAGGTGAAAACGCTGTG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCACCAGCTGTAGGAAGGTaGCTGGTGTCCAGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAPAVGR*LVSRGN
Trigger: ATTACCCCTGGACACCAGCCACCTTCCTACAGCTGG...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACTGGGGTCCTCATATTaGGATGAGCCAAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSLGSSY*DEPRDV
Trigger: AACATCTCTTGGCTCATCCCAATATGAGGACCCCAG...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTGTCCCCATAGGGAGGTaGCCCATGTTGCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTVPIGR*PMLPRE
Trigger: TTCTCTGGGCAACATGGGCCACCTCCCTATGGGGAC...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGAAACCAGGTGCTTaGCCCCTGGCCCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAMKPGA*PLAPSN
Trigger: GTTTGAAGGGGCCAGGGGCCAAGCACCTGGTTTCAT...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTGCTCCCTGTCCCTGTTaGAGCTCCTATCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPAPCPC*SSYPCL
Trigger: AAGGCAGGGATAGGAGCTCCAACAGGGACAGGGAGC...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGATGATGGGAGGGGCCTaGGAAGCCAGCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKMMGGA*EASLWV
Trigger: CACCCAAAGGCTGGCTTCCCAGGCCCCTCCCATCAT...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACTAGGCAGGAACACCTaGGGTCCAGAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWILGRNT*GPEASW
Trigger: CCAAGATGCCTCTGGACCCCAGGTGTTCCTGCCTAG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTGCCCACCAAAGAGGCTaGAGGAAGTGCTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPAHQRG*RKCFLR
Trigger: CCGAAGAAAGCACTTCCTTCAGCCTCTTTGGTGGGC...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAGCCCACCAAAGAGGCTaGAGGAAGTGCTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGAHQRG*RKCFLR
Trigger: CCGAAGAAAGCACTTCCTTCAGCCTCTTTGGTGGGC...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSPSACC*RRPGEV
Trigger: CACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCPSACC*RRPGEV
Trigger: CACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGG...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGCTCCTTGGACACCGATaGCTTGAGTTTGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: GPHTSDQALCVIWTPPCVLLGHR*LEFANV
Trigger: TACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAG...CACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKFLRRF*LPLRDL
Trigger: GAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGAATAAACCTGTTGTTGTaGGGCTGGCGGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGINLLL*GWRQMQ
Trigger: CTGCATCTGCCGCCAGCCTCACAACAACAGGTTTAT...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCCATAAATGTGGGCCCTaGGAAAGGCTCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASHKCGP*ERLPAS
Trigger: GGAAGCAGGGAGCCTTTCTCAGGGCCCACATTTATG...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCAGGCAGCCACCCAGATaGTGGGAGGGGCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPRQPPR*WEGPGK
Trigger: CTTCCCAGGCCCCTCCCATCATCTGGGTGGCTGCCT...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCGGCTGGTTTGGCTCCTaGCATATTAGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTGWFGS*HIRVRR
Trigger: CCTCCTTACTCTAATATGGCAGGAGCCAAACCAGCC...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTGGGTGCTTCCTCATTaGTCAGGTGCCCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLWVLPH*SGALYH
Trigger: ATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCTGGGTGCTTCCTCATTaGTCAGGTGCCCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTWVLPH*SGALYH
Trigger: ATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCA...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCTTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVLCCCG*CSLGST
Trigger: GGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAA...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGAGGCTGGCGGCAGATaGAGTACAGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMEAGGR*STGHWG
Trigger: ACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCCAGCACCCACAGATCTaGACCCAGAGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCQHPQI*TQSPAH
Trigger: ATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTG...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTALLSL*LCSLCH
Trigger: ATGGCACAGACTGCACAAGCATAGGGACAGTAGAGC...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCGGACACAGAAAAGTGTaGCATGGACACACCCACAGC +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFGHRKV*HGHTHS
Trigger: GCTGTGGGTGTGTCCATGGCACACTTTTCTGTGTCC...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTGATTGGTGGCTTCTGTaGCCCAAATCTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTDWWLL*PKSGRW
Trigger: CCACCTGCCAGATTTGGGGCACAGAAGCCACCAATC...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTTTTCAGGAAAGGGTaGAGGGCCCCTTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCFFRKG*RAPWSS
Trigger: GGAGGACCAAGGGGCCCTGCACCCTTTCCTGAAAAA...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGAGGCATCTTGGTATCTaGTTCTGGCTGGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQRHLGI*FWLAVS
Trigger: GCTCACTGCCAGCCAGAAGCAGATACCAAGATGCCT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTATTGGTCCTGCCTGCCTaGCAGAAGTGCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELLVLPA*QKCLTG
Trigger: CCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAA...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCTGTCATAGGTGTTaGTCCTGCCTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVSCHRC*SCLPGR
Trigger: TCTGCCAGGCAGGCAGGACCAACACCTATGACAGCT...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCAACATTGGCAGACATTaGCTTCCTGGTAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTNIGRH*LPGNSH
Trigger: GTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTT...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGAACATTGGCAGACATTaGCTTCCTGGTAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLNIGRH*LPGNSH
Trigger: GTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTT...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCAAGCCGTCCTGGGGCTaGAGAAGCAGCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASKPSWG*RSSRNI
Trigger: AATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTT...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAAAGCCGTCCTGGGGCTaGAGAAGCAGCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGKPSWG*RSSRNI
Trigger: AATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTT...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTCCTCAGTGGCAGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQSSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCTGCCACTGAGGA...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATAACTGGGTGCTTACCTaGGCCCTCAAAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYNWVLT*ALKGQE
Trigger: CTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTT...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTCACGTTTGGCAATCGTaGTTCTTCGAAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIHVWQS*FFENPR
Trigger: CCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTG...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTGCACTTGCAAAATaGTGCAATTTGGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSPALAK*CNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGG...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQLPFMP*SSPDFC
Trigger: GCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCATCCCTGACTTGGGTCTaGGGCTTGCTGTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAASLTWV*GLLFLR
Trigger: TCTCAAGAACAGCAAGCCCCAGACCCAAGTCAGGGA...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTTGCGGTCTTCAAATTaGGCTGGTGCTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASLRSSN*AGAPPR
Trigger: CCGAGGAGGAGCACCAGCCCAATTTGAAGACCGCAA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACATCTCCCTTCAAAAGCTaGGCTCCTATATTCATGGCC +
Preference number: 4 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTSPFKS*APIFMA
Trigger: GGCCATGAATATAGGAGCCCAGCTTTTGAAGGGAGA...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCGGTACCCTTGAAGCCTaGAGGCAGTTTCTTAATGGC +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFGTLEA*RQFLNG
Trigger: GCCATTAAGAAACTGCCTTCAGGCTTCAAGGGTACC...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAAACCCCAGGTTTTCCTaGACTCCTTACTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAANPRFS*TPYWWV
Trigger: AACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTT...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGAACCCCAGGTTTTCCTaGACTCCTTACTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQNPRFS*TPYWWV
Trigger: AACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAACACTCTGCACATCATaGGGCCTCCCTGGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPTLCTS*GLPGSA
Trigger: CGCTGAGCCAGGGAGGCCTCATGATGTGCAGAGTGT...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCGGGGCTTGCTGTTCTTaGGAGAACAGCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASGACCS*ENSSVL
Trigger: CAAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCC...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGCTTCTGGCTGGCAGTaGGCTGCTGGCTACTATCAG +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMASGWQ*AAGYYQ
Trigger: CTGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGCCACAGGACACCTCGATGGCGCTCAGCAGGACCACACACCTCAGACCAAGCCCATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GHRTPRWRSAGPHTSDQAHSDKF*QGDFFS
Trigger: CGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATG...GGCTTGGTCTGAGGTGTGTGGTCCTGCTGAGCGCCATCGAGGTGTCCTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTGGACTTGGGCACCACTaGAGAAGTCAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPGLGHH*RSQCRL
Trigger: AAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCC...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGTAGAGAGAAATGTATaGAACCTCCTCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTVERNV*NLLLLS
Trigger: ACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTAC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCTCCCAGAAACTGGGTaGTTACCTGGGCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQLPETG*LPGPSK
Trigger: CTTTGAGGGCCCAGGTAAGCACCCAGTTTCTGGGAG...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCTTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTFDSLG*FLIAQV
Trigger: CACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAA...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGTGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVCCCGC*SLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCA...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCCTCTCCACAGGTTCTTaGTCTCGCTTTCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCLSTGS*SRFLRR
Trigger: CCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAG...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCCTCTCCACAGGTTCTTaGTCTCGCTTTCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVLSTGS*SRFLRR
Trigger: CCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAG...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACTCTCCACAGGTTCTTaGTCTCGCTTTCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWILSTGS*SRFLRR
Trigger: CCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATACTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWILSLCL*SLCHQH
Trigger: GTGCTGATGGCACAGACTGCACAAGCATAGGGACAG...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTACTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLLSLCL*SLCHQH
Trigger: GTGCTGATGGCACAGACTGCACAAGCATAGGGACAG...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVVVVVT*PGWCAA
Trigger: AGCAGCACACCATCCTGGGCAAGTGACCACAACTAC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGCCCTTGCAGGTAGGGTaGCTTGTGGGCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQPLQVG*LVGQVC
Trigger: GCACACCTGGCCCACAAGGCACCCTACCTGCAAGGG...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCATATATTCATGGCCTTTaGCTTCTCGGAACTCTGATG +
Preference number: 4 (lower is better)
Translates to: GPQKAVLPPLQLRTAPSSYIHGL*LLGTLM
Trigger: CATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATA...TGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTTGGAGCTCCTATCCCTaGCTTTATCCCACTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPWSSYP*LYPTPD
Trigger: ATCGGGAGTGGGATAAAGGCAGGGATAGGAGCTCCA...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATGTCTCGGTCTCTGCTaGGGGACCTGTCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPCLGLC*GTCLGL
Trigger: GAGACCGAGACAGGTCCCGCAGCAGAGACCGAGACA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTTCTATTGGTCCTGCCTGCCTaGCAGAAGTGCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: CSPSGVEYRPWGIQELLLLVLPA*QKCLTG
Trigger: CCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAA...TAGAAGTAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAGTCGAATTTGTGAATTaGGCTGTGATGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAVEFVN*AVMELG
Trigger: GCCCAGCTCCATCACAGCCCAATTCACAAATTCGAC...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTAGGAACTGCATTAGGTaGAGAGCTGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTRNCIR*RAVMPG
Trigger: CCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCT...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAAGGAACTGCATTAGGTaGAGAGCTGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGRNCIR*RAVMPG
Trigger: CCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCT...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTTGTACTCTCCGGGTCTaGCTCAGAGGCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPCTLRV*LRGIFR
Trigger: CCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACA...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVGQEFG*HRVLST
Trigger: AGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFVCPLP*GFPLYF
Trigger: GAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAAC...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTLPFMP*SSPDFC
Trigger: GCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAG...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTACTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLLPFMP*SSPDFC
Trigger: GCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAG...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGCAGTGGGCTTCTCTaGCTTCTCTGGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQCSGLL*LLWLHS
Trigger: GCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCA...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMWARVQ*ASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCA...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGAGGCAGAGCAGTGGCTaGGCCTGCCTCATCCCATCG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQRQSSG*ACLIPS
Trigger: CGATGGGATGAGGCAGGCCCAGCCACTGCTCTGCCT...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTAGCCCACCAAAGAGGCTaGAGGAAGTGCTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELAHQRG*RKCFLR
Trigger: CCGAAGAAAGCACTTCCTTCAGCCTCTTTGGTGGGC...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGCTTTCCAAATCGTGTTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVLSKSC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAACACGATTTGGAAAG...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATTGGACACCGATGACTTaGGTTTGCCAACGTAATCCC +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYWTPMT*VCQRNP
Trigger: GGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCA...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATCTCCTTGGACACCGATaGCTTGAGTTTGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYLLGHR*LEFANV
Trigger: TACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAG...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATAAACCCCAGGTTTTCCTaGACTCCTTACTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWINPRFS*TPYWWV
Trigger: AACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTT...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSLSPHQ*LWKMWA
Trigger: AGCCCACATCTTCCACAGTCACTGATGTGGAGACAG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLSPHQ*LWKMWA
Trigger: AGCCCACATCTTCCACAGTCACTGATGTGGAGACAG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGATAAACCTGTTGTTGTaGGGCTGGCGGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKINLLL*GWRQMQ
Trigger: CTGCATCTGCCGCCAGCCTCACAACAACAGGTTTAT...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTGGTGGACCCTGGCTTaGGGGATGACAGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASWWTLA*GMTVFS
Trigger: TGAAAATACTGTCATCCCTCAAGCCAGGGTCCACCA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTCAGCGAGCAGTGTATaGAATGCTCGATCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASSASSV*NARSGL
Trigger: CAACCCTGATCGAGCATTTCATACACTGCTCGCTGA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTAACAAGGTTCTCTTCTaGATAAGGAGGGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTNKVLF*IRRDWP
Trigger: GGGCCAGTCCCTCCTTATTCAGAAGAGAACCTTGTT...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGGCTGGTTTGGCTCCTaGCATATTAGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYGWFGS*HIRVRR
Trigger: CCTCCTTACTCTAATATGGCAGGAGCCAAACCAGCC...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAGGCTGGTTTGGCTCCTaGCATATTAGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGGWFGS*HIRVRR
Trigger: CCTCCTTACTCTAATATGGCAGGAGCCAAACCAGCC...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGCATAGGTGTTGGTCCTaGCTGCCTGGCAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVHRCWS*LPGRSA
Trigger: GGCACTTCTGCCAGGCAGGCAGGACCAACACCTATG...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTGGACTTGGGCACCACTaGAGAAGTCAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCGLGHH*RSQCRL
Trigger: AAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCC...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATGGGTGCTTCCTCATTaGTCAGGTGCCCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGWVLPH*SGALYH
Trigger: ATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCA...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTTGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVCCCGC*SLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCA...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCTGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPCCCGC*SLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCA...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGCGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMRRERL*CCGCCS
Trigger: TGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCG...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAGAGGCTGGCGGCAGATaGAGTACAGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTEAGGR*STGHWG
Trigger: ACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTC...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TGTGATTGGGGCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGCAGCACCCACAGATCTaGACCCAGAGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: CDWGTGLGLQHLSQFRCMQHPQI*TQSPAH
Trigger: ATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTG...CATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGCCCCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGTGCTTGTGCAGTCTGTaGCATCAGCACCCACAGATC +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKCLCSL*HQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVALLSL*LCSLCH
Trigger: ATGGCACAGACTGCACAAGCATAGGGACAGTAGAGC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKVVVVT*PGWCAA
Trigger: AGCAGCACACCATCCTGGGCAAGTGACCACAACTAC...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTCTTGCTCCTCCAGCTaGCTCTTTTGCTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASSCSSS*LFCSSI
Trigger: GATTGAGGAGCAAAAGAGGCAGCTGGAGGAGCAAGA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACTCGACTCCAGTTTCTaGCTCTCTCTCGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPLDSSF*LSLALA
Trigger: GGCGAGAGCGAGAGAGAGGCAGAAACTGGAGTCGAG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGAAGCAGCAGGAACATTaGCAGACATTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQEAKVPVTTWEDYVSEEKQQEH*QTLASW
Trigger: CCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTT...CTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATAAGCAGCAGGAACATTaGCAGACATTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYKQQEH*QTLASW
Trigger: CCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTT...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGGAATGAAAGGACCAAGCCGTCCTaGGGCTGGAGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLNSLGIKSCGEVPWNERTKPS*GWRSSR
Trigger: CCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCT...TTCATTCCAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTAGTCGAATTTGTGAATTaGGCTGTGATGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLVEFVN*AVMELG
Trigger: GCCCAGCTCCATCACAGCCCAATTCACAAATTCGAC...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGTCAGGAGAGGAGGATaGCTTAGCCAGTATGGACTT +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVVRRGG*LSQYGL
Trigger: AAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGAC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGGATGTGGATGGTGTCTaGCAAATCCTCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: GPHTSDQALCVIWTPPCVDVDGV*QILTEI
Trigger: TATCTCAGTGAGGATTTGCCAGACACCATCCACATC...CACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGTCCTCAGTGGCAGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVSSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCTGCCACTGAGGA...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSGQEFG*HRVLST
Trigger: AGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCC...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TGTGATTGGGGCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGAACTGGGTGCTTACCTaGGCCCTCAAAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CDWGTGLGLQHLSQFRCMNWVLT*ALKGQE
Trigger: CTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTT...CATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGCCCCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGTCACCTCCCAGAAACTaGGTGCTTACCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWSPPRN*VLTWAL
Trigger: GAGGGCCCAGGTAAGCACCCAGTTTCTGGGAGGTGA...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTCACGTTTGGCAATCGTaGTTCTTCGAAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPHVWQS*FFENPR
Trigger: CCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTG...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTACACGTTTGGCAATCGTaGTTCTTCGAAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLHVWQS*FFENPR
Trigger: CCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTG...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCCACGTTTGGCAATCGTaGTTCTTCGAAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVHVWQS*FFENPR
Trigger: CCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTG...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYVCPLP*GFPLYF
Trigger: GAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAAC...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGCAAAATGGTGCAATTTaGGCAGATGTAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GPHTSDQALCVIWTPPCVQNGAI*ADVVFP
Trigger: GGGGAAGACTACATCTGCCCAAATTGCACCATTTTG...CACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTCAAAATGGTGCAATTTaGGCAGATGTAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIQNGAI*ADVVFP
Trigger: GGGGAAGACTACATCTGCCCAAATTGCACCATTTTG...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCTCCTGTCATCCTTCATaGATTTACTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTSCHPS*IYSIGW
Trigger: CCACCCTATTGAGTAAATCCATGAAGGATGACAGGA...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTAGGTGGAGGGCCTCTTaGTCCATCACTATTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPRWRAS*SITIRN
Trigger: GTTCCTAATAGTGATGGACCAAGAGGCCCTCCACCT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCATGATGGGAGGGGCCTaGGAAGCCAGCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPMMGGA*EASLWV
Trigger: CACCCAAAGGCTGGCTTCCCAGGCCCCTCCCATCAT...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
3UTR CAA 72 bp CTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTaGACTCCTGTCTCTTCCCTCTTAAATGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LQSHSEGSNGQC*TPVSSLLNALN
Trigger: GTTCAGAGCATTTAAGAGGGAAGAGACAGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACGATGGAAGAGCCCCTaGTTCTTAGGATCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSRWKSP*FLGSLR
Trigger: CCTTAAGGATCCTAAGAATCAGGGGCTCTTCCATCG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCTTCAGGCTTCATTCTaGCAAGTTTTGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFLQASF*QVLPRR
Trigger: TCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGCCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YGTATELLRNQVLWRSPLPSACC*RRPGEV
Trigger: CACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGG...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVPSACC*RRPGEV
Trigger: CACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGG...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTAACCCCAGGTTTTCCTaGACTCCTTACTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCNPRFS*TPYWWV
Trigger: AACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTT...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGAGCCTTCCCTTCCAACTaGTTTTCTATGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGAFPSN*FSMSSV
Trigger: GACAGATGACATAGAAAATCAGTTGGAAGGGAAGGC...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCTCCAGACGGCTCAAATaGTTTCTTTTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTSRRLK*FLFPKE
Trigger: CTCTTTGGGAAAAAGAAATCATTTGAGCCGTCTGGA...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCAAGAGATGTTTCCTaGGACATAAATGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTPRDVS*DINVGP
Trigger: AGGGCCCACATTTATGTCTCAGGAAACATCTCTTGG...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGAGGCAGCCACCCAGATaGTGGGAGGGGCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERRQPPR*WEGPGK
Trigger: CTTCCCAGGCCCCTCCCATCATCTGGGTGGCTGCCT...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVSSVRN*IRWRAV
Trigger: GACAGCTCTCCACCTAATGCAGTTCCTAACACTGCT...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPSSVRN*IRWRAV
Trigger: GACAGCTCTCCACCTAATGCAGTTCCTAACACTGCT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGTTGTCCAGATGGGCTaGCATGGAGGCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWVVQMG*HGGCDC
Trigger: ACAGTCACAGCCTCCATGGCAGCCCATCTGGACAAC...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCCACTGCAGAAGTCAATaGAGGCTTTATCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCHCRSQ*RLYHVQ
Trigger: CTGGACATGATAAAGCCTGCATTGACTTCTGCAGTG...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCCCAGAGACAGGATATaGCTTAGTGACAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTPRDRI*LSDKFC
Trigger: GCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATATTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIFDSLG*FLIAQV
Trigger: CACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAA...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPRRERL*CCGCCS
Trigger: TGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACAGAATCTTCCTCTCTaGGCTTCTTCCTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSQNLPL*ASSSGD
Trigger: ATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCGACGCTAGTCTCTTGTaGACAGAAGAGATTTTAATC +
Preference number: 4 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTDASLL*TEEILI
Trigger: GATTAAAATCTCTTCTGTGCACAAGAGACTAGCGTC...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTAGCTGTCATAGGTGTTaGTCCTGCCTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGLGFSILASLGVCSPSSCHRC*SCLPGR
Trigger: TCTGCCAGGCAGGCAGGACCAACACCTATGACAGCT...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTAAGCCGTCCTGGGGCTaGAGAAGCAGCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: ALGLGFSILASLGVCSPSKPSWG*RSSRNI
Trigger: AATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTT...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTAAGGAACTGCATTAGGTaGAGAGCTGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELRNCIR*RAVMPG
Trigger: CCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCT...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTATGTACTCTCCGGGTCTaGCTCAGAGGCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELCTLRV*LRGIFR
Trigger: CCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACA...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTT +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQRMAIA*RLRETL
Trigger: AAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCT...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTGTCAGGAGAGGAGGATaGCTTAGCCAGTATGGACTT +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCVRRGG*LSQYGL
Trigger: AAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGAC...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGTCCTCAGTGGCAGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQSSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCTGCCACTGAGGA...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCACGTTTGGCAATCGTaGTTCTTCGAAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKHVWQS*FFENPR
Trigger: CCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGACAAAATGGTGCAATTTaGGCAGATGTAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGQNGAI*ADVVFP
Trigger: GGGGAAGACTACATCTGCCCAAATTGCACCATTTTG...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGTGCAGTGGGCTTCTCTaGCTTCTCTGGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVCSGLL*LLWLHS
Trigger: GCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCA...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: YGTATELLRNQVLWRSPLWARVQ*ASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCA...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTCTAGTTCTTCCTGTTaGAGTCGAGTCCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASSSSSC*SRVRFS
Trigger: TGAGAAGCGGACTCGACTCCAACAGGAAGAACTAGA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGCATCAATGGTCACTTTaGCTTCTTCTAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLHQWSL*LLLRWS
Trigger: AGACCATCTTAGAAGAAGCCAAAGTGACCATTGATG...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATGGGAAGCCAGCCTTTaGGTGATACGTACATTTACT +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGWEASL*VIRTFT
Trigger: AGTAAATGTACGTATCACCCAAAGGCTGGCTTCCCA...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTTCAGGCTTCATTCTaGCAAGTTTTGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGLQASF*QVLPRR
Trigger: TCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAG...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCTTCTTAGAAGAAGCTaGAAGCTTTTGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTLLRRS*KLLLLR
Trigger: CCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTGTCCAGTTTGGTTTCTaGAGCCTGGGAGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALGLGFSILASLGVCSPSVQFGF*SLGVVQ
Trigger: CTGGACAACTCCCAGGCTTCAGAAACCAAACTGGAC...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACTGGCAAATCCTCACTaGGATAATCCAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSLANPH*DNPNTQ
Trigger: CTGGGTGTTTGGATTATCTCAGTGAGGATTTGCCAG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTGCCTTCCCTTCCAACTaGTTTTCTATGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTAFPSN*FSMSSV
Trigger: GACAGATGACATAGAAAATCAGTTGGAAGGGAAGGC...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATGCATTTTGGAAGACTaGACTTTTCTGGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGCILED*TFLASS
Trigger: AGACGAAGCCAGAAAAGTTCAGTCTTCCAAAATGCA...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCCAGAGCCTTGTCTTTTaGGAACTGACCAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASQSLVF*ELTKLL
Trigger: CAACAGTTTGGTCAGTTCTCAAAAGACAAGGCTCTG...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGAGGCTTCACGGGCTGTaGAGATGGGCCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQRLHGL*RWALKV
Trigger: CACTTTCAAGGCCCATCTTCACAGCCCGTGAAGCCT...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGAAGCCAGCCTTTGGGTaGTACGTACATTTACTCAAT +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQKPAFG*YVHLLN
Trigger: ATTGAGTAAATGTACGTATCACCCAAAGGCTGGCTT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAGAAGCTGAAAGCTTTTaGTTCTTAGGAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAEAESF*FLGAGS
Trigger: TGAACCAGCTCCTAAGAAGCAAAAGCTTTCAGCTTC...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGCACTGCAGAAGTCAATaGAGGCTTTATCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQEAKVPVTTWEDYVSEEHCRSQ*RLYHVQ
Trigger: CTGGACATGATAAAGCCTGCATTGACTTCTGCAGTG...CTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGGGACTTGGGCACCACTaGAGAAGTCAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVGLGHH*RSQCRL
Trigger: AAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCC...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCATCGTGATTCTGAAATaGTTGGTGATGGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCIVILK*LVMVVL
Trigger: CAGTACCACCATCACCAAGCATTTCAGAATCACGAT...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCGTAGAGAGAAATGTATaGAACCTCCTCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCVERNV*NLLLLS
Trigger: ACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTAC...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCTCCCAGAAACTGGGTaGTTACCTGGGCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVLPETG*LPGPSK
Trigger: CTTTGAGGGCCCAGGTAAGCACCCAGTTTCTGGGAG...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTTTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDILCCCG*CSLGST
Trigger: GGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAA...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTRRERL*CCGCCS
Trigger: TGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACAGCACCCACAGATCTaGACCCAGAGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTQHPQI*TQSPAH
Trigger: ATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATGCTTGTGCAGTCTGTaGCATCAGCACCCACAGATC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPCLCSL*HQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPLSLCL*SLCHQH
Trigger: GTGCTGATGGCACAGACTGCACAAGCATAGGGACAG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGAAAATCTCATGGTAGCTaGTGCGTGTTTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGKSHGS*CVFENA
Trigger: TGCATTCTCAAACACGCAGCAGCTACCATGAGATTT...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGCCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEPRMVC*SHRLPP
Trigger: AGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGG...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTVVVVT*PGWCAA
Trigger: AGCAGCACACCATCCTGGGCAAGTGACCACAACTAC...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTCTAACATTTTCTGCTaGTCTACCAGCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCSNIFC*STSEAL
Trigger: CAGTGCTTCGCTGGTAGAGCAGCAGAAAATGTTAGA...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCTTTTCTTTAGATCCTaGTTCAAATCGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFLFFRS*FKSLPL
Trigger: CAGAGGGAGCGATTTGAAGCAGGATCTAAAGAAAAG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTAAGTGCCTGACAGGGTaGCTGAGGGCCATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFYGTATELLRNQVLWRSKCLTG*LRAMAS
Trigger: AGAGGCCATGGCCCTCAGCCACCCTGTCAGGCACTT...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGAGCTGTCATAGGTGTTaGTCCTGCCTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQSCHRC*SCLPGR
Trigger: TCTGCCAGGCAGGCAGGACCAACACCTATGACAGCT...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTAGCTGTCATAGGTGTTaGTCCTGCCTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVSCHRC*SCLPGR
Trigger: TCTGCCAGGCAGGCAGGACCAACACCTATGACAGCT...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TGTGATTGGGGCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGAAGCAGCAGGAACATTaGCAGACATTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CDWGTGLGLQHLSQFRCMKQQEH*QTLASW
Trigger: CCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTT...CATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGCCCCAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAGATGTGGATGGTGTCTaGCAAATCCTCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGDVDGV*QILTEI
Trigger: TATCTCAGTGAGGATTTGCCAGACACCATCCACATC...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQVLSTQ*NQVQVL
Trigger: AAGGACCTGTACCTGATTCCACTGAGTGCTAAGGAC...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMVCPLP*GFPLYF
Trigger: GAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAAC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTCAAAATGGTGCAATTTaGGCAGATGTAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPQNGAI*ADVVFP
Trigger: GGGGAAGACTACATCTGCCCAAATTGCACCATTTTG...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTACCTGCACTTGCAAAATaGTGCAATTTGGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLPALAK*CNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGG...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCTGCAGTGGGCTTCTCTaGCTTCTCTGGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPCSGLL*LLWLHS
Trigger: GCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCA...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGAAGCTGCAGTTACTTTaGGATAGACTGAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLKLQLL*DRLKFL
Trigger: TAGAAACTTCAGTCTATCCCAAAGTAACTGCAGCTT...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCATGGGCAAGTCATCAATaGTCACTTTGGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAWASHQ*SLWLLL
Trigger: TAGAAGAAGCCAAAGTGACCATTGATGACTTGCCCA...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTGGGTGCTCACATTTTTaGATGTCATGTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTGCSHF*MSCSGL
Trigger: GAGACCTGAACATGACATCCAAAAATGTGAGCACCC...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CAA 72 bp CCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTaGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGG +
Preference number: 4 (lower is better)
Translates to: PLTGHPNLVPGI*GQEAKVPVTTW
Trigger: CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCTTCAGGCTTCATTCTaGCAAGTTTTGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCLQASF*QVLPRR
Trigger: TCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAG...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGGTCCAGTTTGGTTTCTaGAGCCTGGGAGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQVQFGF*SLGVVQ
Trigger: CTGGACAACTCCCAGGCTTCAGAAACCAAACTGGAC...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTGGCAAATCCTCACTaGGATAATCCAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELLANPH*DNPNTQ
Trigger: CTGGGTGTTTGGATTATCTCAGTGAGGATTTGCCAG...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATGGACACCGATGACTTaGGTTTGCCAACGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPWTPMT*VCQRNP
Trigger: GGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGTGGACACCGATGACTTaGGTTTGCCAACGTAATCCC +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWWTPMT*VCQRNP
Trigger: GGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCA...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVLSPHQ*LWKMWA
Trigger: AGCCCACATCTTCCACAGTCACTGATGTGGAGACAG...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPLSPHQ*LWKMWA
Trigger: AGCCCACATCTTCCACAGTCACTGATGTGGAGACAG...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTGCCTTCCCTTCCAACTaGTTTTCTATGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCAFPSN*FSMSSV
Trigger: GACAGATGACATAGAAAATCAGTTGGAAGGGAAGGC...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAATAAACCTGTTGTTGTaGGGCTGGCGGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTINLLL*GWRQMQ
Trigger: CTGCATCTGCCGCCAGCCTCACAACAACAGGTTTAT...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGATAAACCTGTTGTTGTaGGGCTGGCGGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: YGTATELLRNQVLWRSPLINLLL*GWRQMQ
Trigger: CTGCATCTGCCGCCAGCCTCACAACAACAGGTTTAT...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTTGCATTTTGGAAGACTaGACTTTTCTGGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPCILED*TFLASS
Trigger: AGACGAAGCCAGAAAAGTTCAGTCTTCCAAAATGCA...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGCATTTTGGAAGACTaGACTTTTCTGGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLCILED*TFLASS
Trigger: AGACGAAGCCAGAAAAGTTCAGTCTTCCAAAATGCA...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATATATTTGGACGTGGTaGTTCAAGACCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPYIWTW*FKTWAL
Trigger: GAGGGCCCAGGTCTTGAATCACCACGTCCAAATATA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGAAATTGCCTCCAACATaGGGCCTACACAGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKKLPPT*GLHSSL
Trigger: TAAAGAGCTGTGTAGGCCTCATGTTGGAGGCAATTT...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAGAAGCTGAAAGCTTTTaGTTCTTAGGAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGEAESF*FLGAGS
Trigger: TGAACCAGCTCCTAAGAAGCAAAAGCTTTCAGCTTC...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCACTGCAGAAGTCAATaGAGGCTTTATCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQHCRSQ*RLYHVQ
Trigger: CTGGACATGATAAAGCCTGCATTGACTTCTGCAGTG...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGGTAGAGAGAAATGTATaGAACCTCCTCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQVERNV*NLLLLS
Trigger: ACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTAC...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTCAGAATCTTCCTCTCTaGGCTTCTTCCTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTQNLPL*ASSSGD
Trigger: ATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTG...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGGAGGCTGGCGGCAGATaGAGTACAGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPREREAGGR*STGHWG
Trigger: ACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTC...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACATGCTTGTGCAGTCTGTaGCATCAGCACCCACAGATC +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTCLCSL*HQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTALLSL*LCSLCH
Trigger: ATGGCACAGACTGCACAAGCATAGGGACAGTAGAGC...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTAAATCTCATGGTAGCTaGTGCGTGTTTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPKSHGS*CVFENA
Trigger: TGCATTCTCAAACACGCAGCAGCTACCATGAGATTT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTAAAATCTCATGGTAGCTaGTGCGTGTTTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLKSHGS*CVFENA
Trigger: TGCATTCTCAAACACGCAGCAGCTACCATGAGATTT...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERPRMVC*SHRLPP
Trigger: AGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGCCCCATGAGGATCCTTaGGGTCTTCAAATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQPHEDP*GLQIGL
Trigger: CAGCCCAATTTGAAGACCGCAAGGATCCTCATGGGG...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATCCAAACTGAAAGGGTaGCCTGTTCCCCATGAACTG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPSKLKG*PVPHEL
Trigger: CAGTTCATGGGGAACAGGGCACCCTTTCAGTTTGGA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCAGGCATCTTGGTATCTaGTTCTGGCTGGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPRHLGI*FWLAVS
Trigger: GCTCACTGCCAGCCAGAAGCAGATACCAAGATGCCT...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGACTGAAATAAGAAATTaGCTCCAACATGAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQTEIRN*LQHEAY
Trigger: GTAGGCCTCATGTTGGAGGCAATTTCTTATTTCAGT...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCCAGTTTCTTAATGGCTaGTTTGGCTCCTGCCATATT +
Preference number: 4 (lower is better)
Translates to: SLEATGATQQLSFHEAGCQFLNG*FGSCHI
Trigger: AATATGGCAGGAGCCAAACCAGCCATTAAGAAACTG...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GCAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTCAGGAATGGTTTCTaGTTTAGTAGTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGPHTSDQALCVIWTPPCVRNGF*FSSVLL
Trigger: AAGAAGAACACTACTAAACCAGAAACCATTCCTGAC...ACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACATGTACTCTCCGGGTCTaGCTCAGAGGCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTCTLRV*LRGIFR
Trigger: CCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACA...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGTCACCTCCCAGAAACTaGGTGCTTACCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQESPPRN*VLTWAL
Trigger: GAGGGCCCAGGTAAGCACCCAGTTTCTGGGAGGTGA...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVVCPLP*GFPLYF
Trigger: GAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAAC...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTVCPLP*GFPLYF
Trigger: GAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAAC...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAAAGACTGAACTTTTCTaGCTTCGTCTTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAKTELF*LRLDLF
Trigger: GAAAAGGTCAAGACGAAGCCAGAAAAGTTCAGTCTT...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCACTGAACACTGCATTTTaGAAGACTGAACTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NPSPIWSLSVCRATQRAALNTAF*KTELFW
Trigger: CCAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAG...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTCCTGTCATCCTTCATaGATTTACTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASSCHPS*IYSIGW
Trigger: CCACCCTATTGAGTAAATCCATGAAGGATGACAGGA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACAGTATTTTCAATACTaGGGGTTCAGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSQYFQY*GFRKRR
Trigger: CCTCCTCTTCCTGAACCCCCAGTATTGAAAATACTG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCCCAGAACTAAAATTTTaGGCCTTAGGTTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASPELKF*ALGCKG
Trigger: CCCTTTGCAACCTAAGGCCCAAAATTTTAGTTCTGG...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGGAAATGACCAGGAGGTaGTCCCCTTTGGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQEMTRR*SPLGSK
Trigger: TTTGGAGCCCAAAGGGGACCACCTCCTGGTCATTTC...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACACCCCCTCAGAGGTCCTaGCCTCAGGCTTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTPPQRS*PQASGP
Trigger: GGGACCAGAAGCCTGAGGCCAGGACCTCTGAGGGGG...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
3UTR CAA 72 bp CAGGCTGCTTCACCACCATCCTCTTCGTTTCCAGATTaGGTACAAACATTGCCCCATCCCACTGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QAASPPSSSFPD*VQTLPHPTEKL
Trigger: AAGCTTCTCAGTGGGATGGGGCAATGTTTGTACCAAATCTGGAAACGAAGAGGATGGTGGTGAAGCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAGGTACCCTTGAAGCCTaGAGGCAGTTTCTTAATGGC +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTGTLEA*RQFLNG
Trigger: GCCATTAAGAAACTGCCTTCAGGCTTCAAGGGTACC...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTAAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLSHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCGATGGAAGAGCCCCTaGTTCTTAGGATCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVRWKSP*FLGSLR
Trigger: CCTTAAGGATCCTAAGAATCAGGGGCTCTTCCATCG...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTTTCCAAATCGTGTTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELLSKSC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAACACGATTTGGAAAG...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGCTGGCAAATCCTCACTaGGATAATCCAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWLANPH*DNPNTQ
Trigger: CTGGGTGTTTGGATTATCTCAGTGAGGATTTGCCAG...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGGACACCGATGACTTaGGTTTGCCAACGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPWTPMT*VCQRNP
Trigger: GGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCA...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTGGACGTTTCACTTTCTaGCATATTACTAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: ESVSLQSHSEGSNGQCLTGRFTF*HITNPS
Trigger: ACTTGGGTTAGTAATATGTCAGAAAGTGAAACGTCC...AGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAACCTGCCTGGCAGAAGTaGCTGACAGGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQPAWQK*LTGWLR
Trigger: CCTCAGCCACCCTGTCAGGCACTTCTGCCAGGCAGG...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVSSVRN*IRWRAV
Trigger: GACAGCTCTCCACCTAATGCAGTTCCTAACACTGCT...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWSSVRN*IRWRAV
Trigger: GACAGCTCTCCACCTAATGCAGTTCCTAACACTGCT...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGTTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWFDSLG*FLIAQV
Trigger: CACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAA...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACAGAATCTTCCTCTCTaGGCTTCTTCCTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTQNLPL*ASSSGD
Trigger: ATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTAAATCTCATGGTAGCTaGTGCGTGTTTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCKSHGS*CVFENA
Trigger: TGCATTCTCAAACACGCAGCAGCTACCATGAGATTT...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTAGACGCTAGTCTCTTGTaGACAGAAGAGATTTTAATC +
Preference number: 4 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLDASLL*TEEILI
Trigger: GATTAAAATCTCTTCTGTGCACAAGAGACTAGCGTC...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERAALTG*LLPRSL
Trigger: GAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGC...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGAGAACAGCTCTGTCTTaGCCAAAGACGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQRTALS*PKTTWE
Trigger: CTCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCT...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGAACATTGGCAGACATTaGCTTCCTGGTAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWNIGRH*LPGNSH
Trigger: GTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTT...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTAAGCCGTCCTGGGGCTaGAGAAGCAGCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: LFYGTATELLRNQVLWRSKPSWG*RSSRNI
Trigger: AATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTT...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTGTCGAATTTGTGAATTaGGCTGTGATGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVVEFVN*AVMELG
Trigger: GCCCAGCTCCATCACAGCCCAATTCACAAATTCGAC...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGATCTCCTTCTCAATGTaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: GQEAKVPVTTWEDYVSEEISFSM*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCACATTGAGAAGGAGAT...CTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAATCTCCTTCTCAATGTaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGISFSM*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCACATTGAGAAGGAGAT...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTT +
Preference number: 4 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQRMAIA*RLRETL
Trigger: AAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCT...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTAGATGTGGATGGTGTCTaGCAAATCCTCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELDVDGV*QILTEI
Trigger: TATCTCAGTGAGGATTTGCCAGACACCATCCACATC...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPVLSTQ*NQVQVL
Trigger: AAGGACCTGTACCTGATTCCACTGAGTGCTAAGGAC...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGGTCACTTGCCCAGGATaGTGTGCTGCTCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERVTCPG*CAALTG
Trigger: GCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGAC...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGTGCCCAAAGACGACTTaGGAGGTGGTGACATCAATG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQCPKTT*EVVTSM
Trigger: CATTGATGTCACCACCTCCCAAGTCGTCTTTGGGCA...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACACCTTGGTCCTCCATATaGCAGGGGCGCCGATGCCCT +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTPWSSI*QGRRCP
Trigger: AGGGCATCGGCGCCCCTGCCATATGGAGGACCAAGG...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCTAGGCAGGAACACCTaGGGTCCAGAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNLGRNT*GPEASW
Trigger: CCAAGATGCCTCTGGACCCCAGGTGTTCCTGCCTAG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTAACAAGATTCCTAGGTaGAGTCTGTCTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPNKIPR*SLSAHQ
Trigger: TTGGTGGGCAGACAGACTTCACCTAGGAATCTTGTT...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: EASKPIAYLESVSLQSHSSHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTCTTCAGGCTTCATTCTaGCAAGTTTTGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ALGLGFSILASLGVCSPSLQASF*QVLPRR
Trigger: TCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAG...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCTTCTTAGAAGAAGCTaGAAGCTTTTGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQLLRRS*KLLLLR
Trigger: CCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAG...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGTCCAGTTTGGTTTCTaGAGCCTGGGAGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEVQFGF*SLGVVQ
Trigger: CTGGACAACTCCCAGGCTTCAGAAACCAAACTGGAC...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACTTTCCAAATCGTGTTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPLSKSC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAACACGATTTGGAAAG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTGCCTTCCCTTCCAACTaGTTTTCTATGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTAFPSN*FSMSSV
Trigger: GACAGATGACATAGAAAATCAGTTGGAAGGGAAGGC...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGCCCTGGCTTGAGGGATaGCAGTATTTTCAATACTGG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQPWLEG*QYFQYW
Trigger: CCAGTATTGAAAATACTGTCATCCCTCAAGCCAGGG...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTAAATTGCCTCCAACATaGGGCCTACACAGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTKLPPT*GLHSSL
Trigger: TAAAGAGCTGTGTAGGCCTCATGTTGGAGGCAATTT...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTGGACTTGGGCACCACTaGAGAAGTCAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LFYGTATELLRNQVLWRSGLGHH*RSQCRL
Trigger: AAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCC...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTTGGGTGCTTCCTCATTaGTCAGGTGCCCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVWVLPH*SGALYH
Trigger: ATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCA...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPFDSLG*FLIAQV
Trigger: CACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAA...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCTTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPFDSLG*FLIAQV
Trigger: CACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAA...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGTTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERLCCCG*CSLGST
Trigger: GGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAA...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERRRERL*CCGCCS
Trigger: TGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCAGCACCCACAGATCTaGACCCAGAGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNQHPQI*TQSPAH
Trigger: ATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGTGCTTGTGCAGTCTGTaGCATCAGCACCCACAGATC +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQECLCSL*HQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGAAATCTCATGGTAGCTaGTGCGTGTTTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: GREETLLLTDDDTLNVRMKSHGS*CVFENA
Trigger: TGCATTCTCAAACACGCAGCAGCTACCATGAGATTT...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGACGCTAGTCTCTTGTaGACAGAAGAGATTTTAATC +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKDASLL*TEEILI
Trigger: GATTAAAATCTCTTCTGTGCACAAGAGACTAGCGTC...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACACCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTPRMVC*SHRLPP
Trigger: AGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGG...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEVVVVT*PGWCAA
Trigger: AGCAGCACACCATCCTGGGCAAGTGACCACAACTAC...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAAGCAGTGGCTGGGCCTaGCTCATCCCATCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTSSGWA*LIPSVL
Trigger: AAGGACCGATGGGATGAGGCAGGCCCAGCCACTGCT...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGAACATTGGCAGACATTaGCTTCCTGGTAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: YGTATELLRNQVLWRSPLNIGRH*LPGNSH
Trigger: GTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTT...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTC +
Preference number: 4 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVKHFLS*LRLDVL
Trigger: GAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTT...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTC +
Preference number: 4 (lower is better)
Translates to: EESPWIDGSRDGYTGKASKHFLS*LRLDVL
Trigger: GAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTT...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAGATGTGGATGGTGTCTaGCAAATCCTCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPDVDGV*QILTEI
Trigger: TATCTCAGTGAGGATTTGCCAGACACCATCCACATC...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDIVLSTQ*NQVQVL
Trigger: AAGGACCTGTACCTGATTCCACTGAGTGCTAAGGAC...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCTGAACACTGCATTTTaGAAGACTGAACTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLNTAF*KTELFW
Trigger: CCAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGCTGAACACTGCATTTTaGAAGACTGAACTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQLNTAF*KTELFW
Trigger: CCAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAG...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACTGCAGTGGGCTTCTCTaGCTTCTCTGGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNCSGLL*LLWLHS
Trigger: GCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCA...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TGTGATTGGGGCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTCCTGTCATCCTTCATaGATTTACTCAATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CDWGTGLGLQHLSQFRCMSCHPS*IYSIGW
Trigger: CCACCCTATTGAGTAAATCCATGAAGGATGACAGGA...CATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGCCCCAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGTTGTACGGAGTGTCCTaGAATTCCCTTTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQLYGVS*NSLFSP
Trigger: TGGGGAGAAAAGGGAATTCCAGGACACTCCGTACAA...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp TGTGATTGGGGCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGCTTCTTAGAAGAAGCTaGAAGCTTTTGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: CDWGTGLGLQHLSQFRCMLLRRS*KLLLLR
Trigger: CCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAG...CATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGCCCCAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACTTTCCAAATCGTGTTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTLSKSC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAACACGATTTGGAAAG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAAGCTGAAAGCTTTTaGTTCTTAGGAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWEAESF*FLGAGS
Trigger: TGAACCAGCTCCTAAGAAGCAAAAGCTTTCAGCTTC...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGCACTGCAGAAGTCAATaGAGGCTTTATCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQHCRSQ*RLYHVQ
Trigger: CTGGACATGATAAAGCCTGCATTGACTTCTGCAGTG...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAATCGTGATTCTGAAATaGTTGGTGATGGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPIVILK*LVMVVL
Trigger: CAGTACCACCATCACCAAGCATTTCAGAATCACGAT...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGCCCAGAGACAGGATATaGCTTAGTGACAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWPRDRI*LSDKFC
Trigger: GCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGG...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGCCCAGAGACAGGATATaGCTTAGTGACAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVPRDRI*LSDKFC
Trigger: GCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGG...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTGTAGAGAGAAATGTATaGAACCTCCTCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPVERNV*NLLLLS
Trigger: ACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTAC...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCTCTCCACAGGTTCTTaGTCTCGCTTTCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERLSTGS*SRFLRR
Trigger: CCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACTGCTTGTGCAGTCTGTaGCATCAGCACCCACAGATC +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNCLCSL*HQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNLSLCL*SLCHQH
Trigger: GTGCTGATGGCACAGACTGCACAAGCATAGGGACAG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTAALTG*LLPRSL
Trigger: GAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGCAGTTTCTTAATGGCTaGTTTGGCTCCTGCCATATT +
Preference number: 4 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWQFLNG*FGSCHI
Trigger: AATATGGCAGGAGCCAAACCAGCCATTAAGAAACTG...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGCAGTTTCTTAATGGCTaGTTTGGCTCCTGCCATATT +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVQFLNG*FGSCHI
Trigger: AATATGGCAGGAGCCAAACCAGCCATTAAGAAACTG...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCAAGGACCAAGCCGTCCTaGGGCTGGAGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILTDFTFEMCWALKSSSARTKPS*GWRSSR
Trigger: CCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCT...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGTCGAATTTGTGAATTaGGCTGTGATGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEVEFVN*AVMELG
Trigger: GCCCAGCTCCATCACAGCCCAATTCACAAATTCGAC...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACAAAATGGTGCAATTTaGGCAGATGTAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTQNGAI*ADVVFP
Trigger: GGGGAAGACTACATCTGCCCAAATTGCACCATTTTG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTCCTGCACTTGCAAAATaGTGCAATTTGGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDIPALAK*CNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGG...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERLPFMP*SSPDFC
Trigger: GCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTTGCATTTTGGAAGACTaGACTTTTCTGGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDICILED*TFLASS
Trigger: AGACGAAGCCAGAAAAGTTCAGTCTTCCAAAATGCA...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPHSDKF*QGDFFS
Trigger: CGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp TGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTTCTACATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: CSPSGVEYRPWGIQELLLHSDKF*QGDFFS
Trigger: CGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATG...TAGAAGTAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTTGTCCAGATGGGCTaGCATGGAGGCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQVVQMG*HGGCDC
Trigger: ACAGTCACAGCCTCCATGGCAGCCCATCTGGACAAC...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGATCGTGATTCTGAAATaGTTGGTGATGGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQIVILK*LVMVVL
Trigger: CAGTACCACCATCACCAAGCATTTCAGAATCACGAT...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGCCCAGAGACAGGATATaGCTTAGTGACAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: YGTATELLRNQVLWRSPLPRDRI*LSDKFC
Trigger: GCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGG...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCAGAATCTTCCTCTCTaGGCTTCTTCCTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNQNLPL*ASSSGD
Trigger: ATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERALLSL*LCSLCH
Trigger: ATGGCACAGACTGCACAAGCATAGGGACAGTAGAGC...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGGAGGTGGCCCATGTTaGCCAGAGAATAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTGGGPC*PENKEG
Trigger: CCCTTCCTTATTCTCTGGGCAACATGGGCCACCTCC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTACTGAAATAAGAAATTaGCTCCAACATGAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTTEIRN*LQHEAY
Trigger: GTAGGCCTCATGTTGGAGGCAATTTCTTATTTCAGT...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGAACTGGGTGCTTACCTaGGCCCTCAAAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWNWVLT*ALKGQE
Trigger: CTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTT...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTAAGACTGAACTTTTCTaGCTTCGTCTTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTKTELF*LRLDLF
Trigger: GAAAAGGTCAAGACGAAGCCAGAAAAGTTCAGTCTT...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGAAGACTGAACTTTTCTaGCTTCGTCTTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVKTELF*LRLDLF
Trigger: GAAAAGGTCAAGACGAAGCCAGAAAAGTTCAGTCTT...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGTGGCTTCTTCTAAGATaGTCTCATCTTCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQWLLLR*SHLLGH
Trigger: ATGACCCAGAAGATGAGACCATCTTAGAAGAAGCCA...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR GCA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTACATAGGTGTTGGTCCTaGCTGCCTGGCAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVHRCWS*LPGRSA
Trigger: GGCACTTCTGCCAGGCAGGCAGGACCAACACCTATG...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTHSDKF*QGDFFS
Trigger: CGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACTGGGTGCTTCCTCATTaGTCAGGTGCCCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNWVLPH*SGALYH
Trigger: ATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCA...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAACTCTCCACAGGTTCTTaGTCTCGCTTTCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQLSTGS*SRFLRR
Trigger: CCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAG...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGCTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWLSLCL*SLCHQH
Trigger: GTGCTGATGGCACAGACTGCACAAGCATAGGGACAG...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCGACGCTAGTCTCTTGTaGACAGAAGAGATTTTAATC +
Preference number: 4 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPDASLL*TEEILI
Trigger: GATTAAAATCTCTTCTGTGCACAAGAGACTAGCGTC...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR GCA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTAGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVAALTG*LLPRSL
Trigger: GAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGC...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGATCTCCTTCTCAATGTaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQISFSM*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCACATTGAGAAGGAGAT...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCAGTCAGGAATGGTTTCTaGTTTAGTAGTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPVRNGF*FSSVLL
Trigger: AAGAAGAACACTACTAAACCAGAAACCATTCCTGAC...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAAGGAACTGCATTAGGTaGAGAGCTGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQRNCIR*RAVMPG
Trigger: CCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCT...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTC +
Preference number: 4 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVKHFLS*LRLDVL
Trigger: GAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTT...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWGQEFG*HRVLST
Trigger: AGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCC...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CCGATTATGGCTTCACAGAACATACTAACAGACTTTACTTTTGAAATGTGCTGGCTCCTTGGACACCGATaGCTTGAGTTTGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: PIMASQNILTDFTFEMCWLLGHR*LEFANV
Trigger: TACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAG...CCAGCACATTTCAAAAGTAAAGTCTGTTAGTATGTTCTGTGAAGCCATAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp CCGATTATGGCTTCACAGAACATACTAACAGACTTTACTTTTGAAATGTGCTGGAACCCCAGGTTTTCCTaGACTCCTTACTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PIMASQNILTDFTFEMCWNPRFS*TPYWWV
Trigger: AACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTT...CCAGCACATTTCAAAAGTAAAGTCTGTTAGTATGTTCTGTGAAGCCATAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp GCTACTTCTATGACAGCATGTTCAAGAATATTTAGCACATGTCAAACCCATTGGGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ATSMTACSRIFSTCQTHWALLSL*LCSLCH
Trigger: ATGGCACAGACTGCACAAGCATAGGGACAGTAGAGC...CCAATGGGTTTGACATGTGCTAAATATTCTTGAACATGCTGTCATAGAAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAAAGCAGCAGGAACATTaGCAGACATTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTKQQEH*QTLASW
Trigger: CCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTT...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTGTCAGGAATGGTTTCTaGTTTAGTAGTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVVRNGF*FSSVLL
Trigger: AAGAAGAACACTACTAAACCAGAAACCATTCCTGAC...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTC +
Preference number: 4 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVKHFLS*LRLDVL
Trigger: GAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTT...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCCTGCACTTGCAAAATaGTGCAATTTGGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERPALAK*CNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCCTGCACTTGCAAAATaGTGCAATTTGGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNPALAK*CNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp CTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGGAATGAAAAGACTGAACTTTTCTaGCTTCGTCTTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLLNSLGIKSCGEVPWNEKTELF*LRLDLF
Trigger: GAAAAGGTCAAGACGAAGCCAGAAAAGTTCAGTCTT...TTCATTCCAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGTGGGAAGCCAGCCTTTaGGTGATACGTACATTTACT +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERWEASL*VIRTFT
Trigger: AGTAAATGTACGTATCACCCAAAGGCTGGCTTCCCA...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQESHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGCTTCTTAGAAGAAGCTaGAAGCTTTTGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQELLRRS*KLLLLR
Trigger: CCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAG...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAACTGGCAAATCCTCACTaGGATAATCCAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQLANPH*DNPNTQ
Trigger: CTGGGTGTTTGGATTATCTCAGTGAGGATTTGCCAG...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGTCCTCATATTGGGATaGGCCAAGAGATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTVLILG*AKRCFL
Trigger: CAGGAAACATCTCTTGGCTCATCCCAATATGAGGAC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR TCA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACAAGCCAGCCTTTGGGTaGTACGTACATTTACTCAAT +
Preference number: 4 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNKPAFG*YVHLLN
Trigger: ATTGAGTAAATGTACGTATCACCCAAAGGCTGGCTT...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp CCGATTATGGCTTCACAGAACATACTAACAGACTTTACTTTTGAAATGTGCTGGGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PIMASQNILTDFTFEMCWVLSTQ*NQVQVL
Trigger: AAGGACCTGTACCTGATTCCACTGAGTGCTAAGGAC...CCAGCACATTTCAAAAGTAAAGTCTGTTAGTATGTTCTGTGAAGCCATAATCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCTGAACACTGCATTTTaGAAGACTGAACTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LFYGTATELLRNQVLWRSLNTAF*KTELFW
Trigger: CCAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAG...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCAGGTACCCTTGAAGCCTaGAGGCAGTTTCTTAATGGC +
Preference number: 4 (lower is better)
Translates to: ILTDFTFEMCWALKSSSAGTLEA*RQFLNG
Trigger: GCCATTAAGAAACTGCCTTCAGGCTTCAAGGGTACC...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGTCAGGAATGGTTTCTaGTTTAGTAGTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MIPLTGHPNLVPGILGQEVRNGF*FSSVLL
Trigger: AAGAAGAACACTACTAAACCAGAAACCATTCCTGAC...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGAAGACTGAACTTTTCTaGCTTCGTCTTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERKTELF*LRLDLF
Trigger: GAAAAGGTCAAGACGAAGCCAGAAAAGTTCAGTCTT...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CCA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCTGAACACTGCATTTTaGAAGACTGAACTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERLNTAF*KTELFW
Trigger: CCAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR TCA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: SHFRMLFYGTATELLRNQSHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR TCA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCAGCCTTCCCTTCCAACTaGTTTTCTATGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: ILTDFTFEMCWALKSSSAAFPSN*FSMSSV
Trigger: GACAGATGACATAGAAAATCAGTTGGAAGGGAAGGC...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR GCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGACGCTAGTCTCTTGTaGACAGAAGAGATTTTAATC +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTDASLL*TEEILI
Trigger: GATTAAAATCTCTTCTGTGCACAAGAGACTAGCGTC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAATCTCCTTCTCAATGTaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: KELSNIFAQSDTLASLLTISFSM*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCACATTGAGAAGGAGAT...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CCA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCACAGTTTCTTAATGGCTaGTTTGGCTCCTGCCATATT +
Preference number: 4 (lower is better)
Translates to: ILTDFTFEMCWALKSSSAQFLNG*FGSCHI
Trigger: AATATGGCAGGAGCCAAACCAGCCATTAAGAAACTG...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS CCA 90 bp TGGCCCACTGCCCGTCGGCCTCATGGCCCTGTCCAGGCCCAGCACTaGAAGGCAGAGCAGTGGCTGGGCCTGCCTCATCCCATCGGTCCT +
Preference number: 5 (lower is better)
Translates to: WPTARRPHGPVQAQH*KAEQWLGLPHPIGP
Trigger: AGGACCGATGGGATGAGGCAGGCCCAGCCACTGCTCTGCCTTCCAGTGCTGGGCCTGGACAGGGCCATGAGGCCGACGGGCAGTGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp TGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCCGTGTCTCCTGCACCCTCACGTTTG +
Preference number: 5 (lower is better)
Translates to: CRPLRRRERLCCCGC*SLGSTSVSPAPSRL
Trigger: CAAACGTGAGGGTGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp CCCTGTCGTTGTCTCGCTCCCTGTCCCTGTTGGAGCTCCTATCCCTaGCTTTATCCCACTCCCGATGCCGGTCCCAGTCCCGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PCRCLAPCPCWSSYP*LYPTPDAGPSPGSS
Trigger: AGAGGAGCCGGGACTGGGACCGGCATCGGGAGTGGGATAAAGGCAGGGATAGGAGCTCCAACAGGGACAGGGAGCGAGACAACGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGGGGCTCTCTCTGCTCTaGCTGCGGTCCTTCCGGTCC +
Preference number: 5 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLGLSLL*LRSFRS
Trigger: GGACCGGAAGGACCGCAGCAAGAGCAGAGAGAGCCC...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CTGCCTCTCTCTCGCTCTCGCCTCCTATCCTCAAATGCCCGGCCCTaGCGGCTTTCCAACCCTTGGGCTTCAGGCTCGTCCAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LPLSRSRLLSSNARP*RLSNPWASGSSRGF
Trigger: AAAGCCTCTGGACGAGCCTGAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGATAGGAGGCGAGAGCGAGAGAGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TTTTGGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTaGTTGCTGCTCACTGGGGTCCACCTCCGTGTCTCCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: FWLPSTAAQGEVMLL*LLLTGVHLRVSCTL
Trigger: GAGGGTGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp CTGGGCTCCTATATTCATGGCCTTTGCCTTCTCGGAACTCTGATGTaGCCCACTGCCCGTCGGCCTCATGGCCCTGTCCAGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LGSYIHGLCLLGTLM*PTARRPHGPVQAQH
Trigger: GTGCTGGGCCTGGACAGGGCCATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATAGGAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp AAAGATGGGCACGGTGCTGGCTTGTGGTGTCCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTGCTGCGCTCTTCTCAGGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KDGHGAGLWCPSACC*RRPGEVLRSSQGRL
Trigger: GAGCCGCCCCTGAGAAGAGCGCAGCACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGGACACCACAAGCCAGCACCGTGCCCATCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp GTACGTTTTGGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTaGTGTGGTTGCTGCTCACTGGGGTCCACCTCCGTGTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: VRFGCRPLRRRERLC*CGCCSLGSTSVSPA
Trigger: TGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp ACTCCAGTTTCTGCCTCTCTCTCGCTCTCGCCTCCTATCCTCAAATaGCCGGCCCTGCCGGCTTTCCAACCCTTGGGCTTCAGGCTCGTC +
Preference number: 5 (lower is better)
Translates to: TPVSASLSLSPPILK*PALPAFQPLGFRLV
Trigger: GACGAGCCTGAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGATAGGAGGCGAGAGCGAGAGAGAGGCAGAAACTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp ACACAGCGTTTTCACCTGGAGCCCAGGGAACAGCCATTGACTCCTTaGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACTGCAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TQRFHLEPREQPLTP*LLLPAQAPGLLQSQ
Trigger: CTGGGACTGCAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAAACGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TCCATATGGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTTGGTaGCGAGTTCACTCTCTGCTCTTCGAACTGCTGGGGCTGAATACC +
Preference number: 5 (lower is better)
Translates to: SIWQGRRCPLAGKPW*RVHSLLFELLGLNT
Trigger: GGTATTCAGCCCCAGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCATATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TCCTCCATATGGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTTaGTGGCGAGTTCACTCTCTGCTCTTCGAACTGCTGGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSIWQGRRCPLAGKP*WRVHSLLFELLGLN
Trigger: ATTCAGCCCCAGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCATATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTEGHGL*GMVPLK
Trigger: CTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTC...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp TTTCTGAAGCCTGGGAGTTGTCCAGATGGGCTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCAGGGCAGTTCTGGGGTCTCGACCAG +
Preference number: 5 (lower is better)
Translates to: FLKPGSCPDGLPWRL*LCTTHSGQFWGLDQ
Trigger: CTGGTCGAGACCCCAGAACTGCCCTGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS TCA 90 bp AGGTCTCAACACAGCGTTTTCACCTGGAGCCCAGGGAACAGCCATTaGCTCCTTGGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACTGC +
Preference number: 5 (lower is better)
Translates to: RSQHSVFTWSPGNSH*LLGFCCQPRPLDYC
Trigger: GCAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAAACGCTGTGTTGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp AAAAGCTGGGCTCCTATATTCATGGCCTTTGCCTTCTCGGAACTCTaGTGTGGCCCACTGCCCGTCGGCCTCATGGCCCTGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KSWAPIFMAFAFSEL*CGPLPVGLMALSRP
Trigger: GGGCCTGGACAGGGCCATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATAGGAGCCCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CCAGGCAACTTTTTGGAAGCAGCTGTCATAGGTGTTGGTCCTGCCTaGCTGGCAGAAGTGCCTGACAGGGTGGCTGAGGGCCATGGCCTC +
Preference number: 5 (lower is better)
Translates to: PGNFLEAAVIGVGPA*LAEVPDRVAEGHGL
Trigger: GAGGCCATGGCCCTCAGCCACCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAACACCTATGACAGCTGCTTCCAAAAAGTTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp TCCTGGAAAACTGGGACCATGATGACCCGACATCCCAAAAGTGCGTaGTGCAGGTTCACGCTGGCCAGGAAACTGAGGCTGAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SWKTGTMMTRHPKSA*CRFTLARKLRLRAP
Trigger: GGGGGCCCTCAGCCTCAGTTTCCTGGCCAGCGTGAACCTGCACCACGCACTTTTGGGATGTCGGGTCATCATGGTCCCAGTTTTCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCAGGAGGTGGTCCCCTTaGGGCTCCAAACTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTRRWSP*GSKLRG
Trigger: CCCTCTCAGTTTGGAGCCCAAAGGGGACCACCTCCT...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAGCTGAGGAGGATGGCTaGGTAGCTCCAACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: NPSPIWSLSVCRATQRAAAEEDG*VAPTGA
Trigger: GGCCCCTGTTGGAGCTACCAAGCCATCCTCCTCAGC...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCATGAAACCAGGTGCTaGGCCCCTGGCCCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTHETRC*APGPFK
Trigger: TTTGAAGGGGCCAGGGGCCAAGCACCTGGTTTCATG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp CACCTGGGGTCCAGAGGCATCTTGGTATCTGCTTCTGGCTGGCAGTaGGCTGCTGGCTACTATCAGCACCAGAACACCCAGGACTCTGGT +
Preference number: 5 (lower is better)
Translates to: HLGSRGILVSASGWQ*AAGYYQHQNTQDSG
Trigger: ACCAGAGTCCTGGGTGTTCTGGTGCTGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGCAGATACCAAGATGCCTCTGGACCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CCA 90 bp AAGCCGTCCTGGGGCTGGAGAAGCAGCAGGAACATTGGCAGACATTaGCTTCCTGGTAACTCCCACCACAGCAGCAGAGCCAGGCAACTT +
Preference number: 5 (lower is better)
Translates to: KPSWGWRSSRNIGRH*LPGNSHHSSRARQL
Trigger: AAGTTGCCTGGCTCTGCTGCTGTGGTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp GCGCCGAACCGTGGTAAGAAACTCTTCTACCCTCTCAGTACGTTTTaGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: APNRGKKLFYPLSTF*LPSTAAQGEVMLLW
Trigger: CCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAGAGGGTAGAAGAGTTTCTTACCACGGTTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp CGCCTCCTATCCTCAAATGCCCGGCCCTGCCGGCTTTCCAACCCTTaGGCTTCAGGCTCGTCCAGAGGCTTTTCTTTAGATCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: RLLSSNARPCRLSNP*ASGSSRGFSLDPAS
Trigger: TGAAGCAGGATCTAAAGAAAAGCCTCTGGACGAGCCTGAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGATAGGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TTTAGGAACCACCCAGAGAGGCTCCACAGGCTAGGCAGGAACACCTaGGGTCCAGAGGCATCTTGGTATCTGCTTCTGGCTGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: FRNHPERLHRLGRNT*GPEASWYLLLAGSE
Trigger: CTCACTGCCAGCCAGAAGCAGATACCAAGATGCCTCTGGACCCCAGGTGTTCCTGCCTAGCCTGTGGAGCCTCTCTGGGTGGTTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCACTCAGGCTTTGGTTaGCCCGCTTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQHSGFG*PASLGF
Trigger: AAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFRWRYR*SHPALA
Trigger: TGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGCCGCCTGGCCTGCCTaGGGTCCCTACTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSAAWPA*GPYFVL
Trigger: CAAGACAAAGTAGGGACCCAAGGCAGGCCAGGCGGC...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCCCCAGGGAACAGCCATaGACTCCTTGGCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFPREQP*TPWLLL
Trigger: CAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGG...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp CAGAACTGCTTTCAACGCTCCCCTCGGAAGCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCTCACTGGAATCCTCCAGGGACACCG +
Preference number: 5 (lower is better)
Translates to: QNCFQRSPRKLSPHQ*LWKMWAHWNPPGTP
Trigger: CGGTGTCCCTGGAGGATTCCAGTGAGCCCACATCTTCCACAGTCACTGATGTGGAGACAGCTTCCGAGGGGAGCGTTGAAAGCAGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp CGGCAGAATCTTCCTCTCTGCGCTTCTTCCTCAGGCGATTCTGACTaGCTCTCAGGGACCTCTCCACAGGTTCTTGCTCTCGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: RQNLPLCASSSGDSD*LSGTSPQVLALAFS
Trigger: GGAGAAAGCGAGAGCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp GTGCAGTCTGTGCCATCAGCACCCACAGATCTGCACCCAGAGTCCTaGTCATCGGTGGCGCTACCGTTTGTCTCATCCTGCACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: VQSVPSAPTDLHPES*SSVALPFVSSCTCK
Trigger: TTTGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp TGCCCTGGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCACCCACAGATCTGCACCCAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: CPGLLRTSALLSLCL*SLCHQHPQICTQSP
Trigger: AGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp CTGGCTTCACAGCATTGTAGTTGTGGTCACTTGCCCAGGATGGTGTaGTGCTCTCACAGGCTGCCTCCTTCCCAGAAGTCTCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LASQHCSCGHLPRMV*CSHRLPPSQKSHSW
Trigger: CCAGGAGTGAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTGTGAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp TCGGACACAGAAAAGTGTGCCATGGACACACCCACAGCAGCCCTCTaGTGTCGGAGAGCTTCTTCTTGCTCCTCCAGCTGCCTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: SDTEKCAMDTPTAAL*CRRASSCSSSCLFC
Trigger: GCAAAAGAGGCAGCTGGAGGAGCAAGAAGAAGCTCTCCGACAGCAGAGGGCTGCTGTGGGTGTGTCCATGGCACACTTTTCTGTGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CCCTCTGTCTCCCTTCAAAAGCTGGGCTCCTATATTCATGGCCTTTaGCTTCTCGGAACTCTGATGTGGCCCACTGCCCGTCGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: PSVSLQKLGSYIHGL*LLGTLMWPTARRPH
Trigger: ATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATAGGAGCCCAGCTTTTGAAGGGAGACAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp GAGGCAGAAGAGGGAGAAAGGCCACCCAGAGACGAGGGCTCAGGATaGCTATCGCCTGGAGACTCAGGGAAACACTTTCTCTCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: EAEEGERPPRDEGSG*LSPGDSGKHFLSWL
Trigger: TAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCTGAGCCCTCGTCTCTGGGTGGCCTTTCTCCCTCTTCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GCAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTAATCCCACACGGTCTTaGGAGCAATCCTTCCACCGA +
Preference number: 5 (lower is better)
Translates to: AGPHTSDQALCVIWTPPCNPTRS*EQSFHR
Trigger: TCGGTGGAAGGATTGCTCCAAAGACCGTGTGGGATT...ACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTSKGKS*DGTGSL
Trigger: TAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGA...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: VVPSHCAEEEGSKGTGPIVGLIA*GASSLL
Trigger: GAGCAATGAGGAAGCACCCAAGGCTATCAAACCCAC...AATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTGTTATGCTGCTGTGGTaGCTGCTCACTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPVMLLW*LLTGVH
Trigger: GTGGACCCCAGTGAGCAGCAACCACAGCAGCATAAC...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAAGGCAGTTCTTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACACCTCTTCACCTCCTTTaGCCTTTTCAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EGSSSTAAIAHSPQLTSTPLHLL*PFQKRQ
Trigger: CTGCCTCTTCTGAAAAGGCAAAAGGAGGTGAAGAGG...TGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAAGAACTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVRWRYR*SHPALA
Trigger: TGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCG...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTACAGCCATTGACTCCTaGGCTTCTGCTGCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPTAIDS*ASAASP
Trigger: TGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CGAACCGTGGTAAGAAACTCTTCTACCCTCTCAGTACGTTTTGGTTaGCGTCCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: RTVVRNSSTLSVRFG*RPLRRRERLCCCGC
Trigger: GCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAGAGGGTAGAAGAGTTTCTTACCACGGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp CCTTTATGCCCTGGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCATCAGCACCCACAGATCTGCACCCAG +
Preference number: 5 (lower is better)
Translates to: PLCPGLLRTSALLSL*LCSLCHQHPQICTQ
Trigger: CTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp GTAGTTGTGGTCACTTGCCCAGGATGGTGTGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTCACTCCTGGAAGCCAGCATCACTTT +
Preference number: 5 (lower is better)
Translates to: VVVVTCPGWCAALTG*LLPRSLTPGSQHHF
Trigger: AAAGTGATGCTGGCTTCCAGGAGTGAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp GCTTCACAGCATTGTAGTTGTGGTCACTTGCCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCTTCCCAGAAGTCTCACTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ASQHCSCGHLPRMVC*SHRLPPSQKSHSWK
Trigger: CTTCCAGGAGTGAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp GGCTCCTGCTTACAGAGAGGTCTGTCCTGCTCGGCACTGCCTATTTaGACACTCCCAGTTTCGGCAGAATCTTCCTCTCTGCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSCLQRGLSCSALPI*TLPVSAESSSLRFF
Trigger: GAAGAAGCGCAGAGAGGAAGATTCTGCCGAAACTGGGAGTGTCCAAATAGGCAGTGCCGAGCAGGACAGACCTCTCTGTAAGCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCGAGACAAAAAGAGGGTaGTATCTCCTTCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTETKRG*YLLLVG
Trigger: CCCCACCAGAAGGAGATACAACCCTCTTTTTGTCTC...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCAATCCCACACGGTCTTaGGAGCAATCCTTCCACCGA +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFNPTRS*EQSFHR
Trigger: TCGGTGGAAGGATTGCTCCAAAGACCGTGTGGGATT...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCAATCCCACACGGTCTTaGGAGCAATCCTTCCACCGA +
Preference number: 5 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCNPTRS*EQSFHR
Trigger: TCGGTGGAAGGATTGCTCCAAAGACCGTGTGGGATT...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCTCTTGCCGCTGGGGTTaGCTGCCTTCTCAATCCTAC +
Preference number: 5 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVSCRWG*LPSQSY
Trigger: GTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAAGA...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS TCA 90 bp GTTTCGGCAGAATCTTCCTCTCTGCGCTTCTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTCTCCACAGGTTCTTGCTCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: VSAESSSLRFFLRRF*LPLRDLSTGSCSRF
Trigger: AAAGCGAGAGCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTCTGCCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp GCCTTCTCAATCCTACCCTTTATGCCCTGGTCTTCTCCGGACTTCTaGTCTACTGTCCCTATGCTTGTGCAGTCTGTGCCATCAGCACCC +
Preference number: 5 (lower is better)
Translates to: AFSILPFMPWSSPDF*STVPMLVQSVPSAP
Trigger: GGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp GGGAGAAAGGCCACCCAGAGACGAGGGCTCAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTTTCTCTCCTGGTTAAGACTAGATGT +
Preference number: 5 (lower is better)
Translates to: GRKATQRRGLRMAIA*RLRETLSLLVKTRC
Trigger: ACATCTAGTCTTAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCTGAGCCCTCGTCTCTGGGTGGCCTTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp TGGGGTCGTAAACCTCACACTCAGGCTTTGGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTCCCTGAGTCGCCTTCCCTTCCAACT +
Preference number: 5 (lower is better)
Translates to: WGRKPHTQALVCPLP*GFPLYFPESPSLPT
Trigger: AGTTGGAAGGGAAGGCGACTCAGGGAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTGTGAGGTTTACGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp TTGCCGCTGGGGTTTGCTGCCTTCTCAATCCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATGCTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LPLGFAAFSILPFMP*SSPDFCSTVPMLVQ
Trigger: CTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp CCTCTCAGCTGTCTCAGACACACTCTGCACATCATGAGGCCTCCCTaGCTCAGCGAGCAGTGTATGAAATGCTCGATCAGGGTTGTACTC +
Preference number: 5 (lower is better)
Translates to: PLSCLRHTLHIMRPP*LSEQCMKCSIRVVL
Trigger: GAGTACAACCCTGATCGAGCATTTCATACACTGCTCGCTGAGCCAGGGAGGCCTCATGATGTGCAGAGTGTGTCTGAGACAGCTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp ACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGTGGGGACTGGGTGGACCTTCTTAATGGCTGGTTaGGCTCCTGCCATATTAGAG +
Preference number: 5 (lower is better)
Translates to: TTWEDYVSEEGCVGTGWTFLMAG*APAILE
Trigger: CTCTAATATGGCAGGAGCCAAACCAGCCATTAAGAA...GGTCCACCCAGTCCCCACGCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCTGTCGAATTTGTGAATaGGGCTGTGATGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCCRICE*GCDGAG
Trigger: CCCAGCTCCATCACAGCCCAATTCACAAATTCGACA...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATTGCTGGGAGCTGGGCGGGCCTCAGAAGGCAGTTCTTCCACCGCTGCAATTGTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HCWELGGPQKAVLPPLQLFIMSS*VSEAWE
Trigger: CTCCCAGGCTTCAGAAACCAAACTGGACATGATAAA...CAATTGCAGCGGTGGAAGAACTGCCTTCTGAGGCCCGCCCAGCTCCCAGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCGAGACAAAAAGAGGGTaGTATCTCCTTCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCETKRG*YLLLVG
Trigger: CCCCACCAGAAGGAGATACAACCCTCTTTTTGTCTC...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCATCAGACAGAGCTCCTaGGACACCGATGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFIRQSS*DTDDLS
Trigger: ACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGAT...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTGAAGAGGGCTGCATCAGACAGAGCTCCTaGGACACCGATGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: EAKVPVTTWEDYVSEEGCIRQSS*DTDDLS
Trigger: ACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGAT...GCAGCCCTCTTCACTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCATCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: NPSPIWSLSVCRATQRAASKGKS*DGTGSL
Trigger: TAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGA...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: EESPWIDGSRDGYTGKASVGLIA*GASSLL
Trigger: GAGCAATGAGGAAGCACCCAAGGCTATCAAACCCAC...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVVGLIA*GASSLL
Trigger: GAGCAATGAGGAAGCACCCAAGGCTATCAAACCCAC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATAGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIVGLIA*GASSLL
Trigger: GAGCAATGAGGAAGCACCCAAGGCTATCAAACCCAC...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGTTATGCTGCTGTGGTaGCTGCTCACTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: GREETLLLTDDDTLNVRMVMLLW*LLTGVH
Trigger: GTGGACCCCAGTGAGCAGCAACCACAGCAGCATAAC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELRWRYR*SHPALA
Trigger: TGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCG...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTATTTTGGGCCTTAGGTaGCAAAGGGAAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPILGLR*QREAGW
Trigger: CCACCCAGCTTCCCTTTGCAACCTAAGGCCCAAAAT...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCAGAATAAGGAAGGGATaGGTGGCTTCTGTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFRIRKG*VASVPQ
Trigger: TTGGGGCACAGAAGCCACCAATCCCTTCCTTATTCT...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGCTGGGAAGCCAGCCTTaGGGTGATACGTACATTTAC +
Preference number: 5 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQLGSQP*GDTYIY
Trigger: GTAAATGTACGTATCACCCAAAGGCTGGCTTCCCAG...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS TCA 90 bp CAGGGTGGAAGCGGATCAGACAGAGCTCCTTGGACACCGATGACTTaGGTTTGCCAACGTAATCCCACACGGTCTTTGGAGCAATCCTTC +
Preference number: 5 (lower is better)
Translates to: QGGSGSDRAPWTPMT*VCQRNPTRSLEQSF
Trigger: GAAGGATTGCTCCAAAGACCGTGTGGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGATCCGCTTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS TCA 90 bp GACCTCTCCACAGGTTCTTGCTCTCGCTTTCTCCGAAGGCGGTTCTaGAGTTCCTTCAACGTAAGGCCATCACTGTCACTGTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: DLSTGSCSRFLRRRF*SSFNVRPSLSLSEV
Trigger: CACCTCTGACAGTGACAGTGATGGCCTTACGTTGAAGGAACTTCAGAACCGCCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 90 bp GCACCCCTGGGGTCCTCATATTGGGATGAGCCAAGAGATGTTTCCTaGGACATAAATGTGGGCCCTGAGAAAGGCTCCCTGCTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: APLGSSYWDEPRDVS*DINVGPEKGSLLPE
Trigger: TTCTGGAAGCAGGGAGCCTTTCTCAGGGCCCACATTTATGTCTCAGGAAACATCTCTTGGCTCATCCCAATATGAGGACCCCAGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CCCAAAGCGACCACGGCTGCTAAAATAGGAGTAGAGAGAAATGTATaGAACCTCCTCCTCCTCAGTGGCAGGGTGGAAGCGGATCAGACA +
Preference number: 5 (lower is better)
Translates to: PKATTAAKIGVERNV*NLLLLSGRVEADQT
Trigger: TGTCTGATCCGCTTCCACCCTGCCACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTACTCCTATTTTAGCAGCCGTGGTCGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp GACTTGGGTCTGGGGCTTGCTGTTCTTGAGAGAACAGCTCTGTCTTaGCCAAAGACGACTTGGGAGGTGGTGACATCAATGCATCGGACA +
Preference number: 5 (lower is better)
Translates to: DLGLGLAVLERTALS*PKTTWEVVTSMHRT
Trigger: TGTCCGATGCATTGATGTCACCACCTCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCCAGACCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CAACCCTTGGGCTTCAGGCTCGTCCAGAGGCTTTTCTTTAGATCCTaGTTCAAATCGCTCCCTCTGTCTCCCTTCAAAAGCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QPLGFRLVQRLFFRS*FKSLPLSPFKSWAP
Trigger: AGGAGCCCAGCTTTTGAAGGGAGACAGAGGGAGCGATTTGAAGCAGGATCTAAAGAAAAGCCTCTGGACGAGCCTGAAGCCCAAGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TGGGCACCACTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGTTTaGTTTCTGAAGCCTGGGAGTTGTCCAGATGGGCTGCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: WAPLQKSMQALSCPV*FLKPGSCPDGLPWR
Trigger: CCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAGTGGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp AGAAACTGGGTGCTTACCTGGGCCCTCAAAGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTACAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: RNWVLTWALKGQEFG*HRVLSTQWNQVQVL
Trigger: AAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: YGTATELLRNQVLWRSPLEGHGL*GMVPLK
Trigger: CTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTC...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTEGHGL*GMVPLK
Trigger: CTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTC...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAATGGGCAATGCTTGACTCCTTGTCGAATTTGTGAATaGGGCTGTGATGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SVSLQSHSEGSNGQCLTPCRICE*GCDGAG
Trigger: CCCAGCTCCATCACAGCCCAATTCACAAATTCGACA...AGGAGTCAAGCATTGCCCATTGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCGAGACAAAAAGAGGGTaGTATCTCCTTCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GILGQEAKVPVTTWEDYVETKRG*YLLLVG
Trigger: CCCCACCAGAAGGAGATACAACCCTCTTTTTGTCTC...GACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CAGGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGCCTTTCCAAATCGTGTaGAGTCGAGACAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: QDHTPQTKPSVSSGPHLVPFQIV*SRDKKR
Trigger: CCTCTTTTTGTCTCGACTCAACACGATTTGGAAAGG...CACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCCCTTTCCAAATCGTGTaGAGTCGAGACAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTPFQIV*SRDKKR
Trigger: CCTCTTTTTGTCTCGACTCAACACGATTTGGAAAGG...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GGACCACACACCTCAGACCAAGCCCTCTGTGTCATCTGGACCCCACCTTGTGTGCCTTTCCAAATCGTGTaGAGTCGAGACAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GPHTSDQALCVIWTPPCVPFQIV*SRDKKR
Trigger: CCTCTTTTTGTCTCGACTCAACACGATTTGGAAAGG...CACACAAGGTGGGGTCCAGATGACACAGAGGGCTTGGTCTGAGGTGTGTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGAATCCCACACGGTCTTaGGAGCAATCCTTCCACCGA +
Preference number: 5 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQNPTRS*EQSFHR
Trigger: TCGGTGGAAGGATTGCTCCAAAGACCGTGTGGGATT...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCTCCTTGACATGCCTGTaGTTATTAGCTACAACCCCA +
Preference number: 5 (lower is better)
Translates to: ATGATQQLSFHEAGCFTTSLTCL*LLATTP
Trigger: TGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGA...GGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATTTGGGTGCTTCCTCATaGCTCAGGTGCCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYLGASS*LRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAA...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGTTATGCTGCTGTGGTaGCTGCTCACTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWVMLLW*LLTGVH
Trigger: GTGGACCCCAGTGAGCAGCAACCACAGCAGCATAAC...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACCTCTTCACCTCCTTTaGCCTTTTCAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGPLHLL*PFQKRQ
Trigger: CTGCCTCTTCTGAAAAGGCAAAAGGAGGTGAAGAGG...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTACCTCTTCACCTCCTTTaGCCTTTTCAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLPLHLL*PFQKRQ
Trigger: CTGCCTCTTCTGAAAAGGCAAAAGGAGGTGAAGAGG...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGCACTCAGGCTTTGGTTaGCCCGCTTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWHSGFG*PASLGF
Trigger: AAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTG...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GGACACAGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGAGCAAAATGGTGCAATTaGGGCAGATGTAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GHSCIDCVVPSHCAEEEGAKWCN*GRCSLP
Trigger: GGGAAGACTACATCTGCCCAAATTGCACCATTTTGC...TCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TATCCACTCAGAGGGGCAGCAGCTCAGCTCAGCTCTGCCATGCAGTCTTCTCAGGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: YPLRGAAAQLSSAMQSSQVAAAC*RMQSLL
Trigger: CAGTAATGACTGCATTCTCAAACACGCAGCAGCTAC...CTGAGAAGACTGCATGGCAGAGCTGAGCTGAGCTGCTGCCCCTCTGAGTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAACTTGGGTCTGGGGCTaGCTGTTCTTGAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSTWVWG*LFLREQ
Trigger: CTGTTCTCTCAAGAACAGCAAGCCCCAGACCCAAGT...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCACTTGCGGTCTTCAAATaGGGCTGGTGCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPLAVFK*GWCSSS
Trigger: CGAGGAGGAGCACCAGCCCAATTTGAAGACCGCAAG...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp CACTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGTTTGGTTTCTaGAGCCTGGGAGTTGTCCAGATGGGCTGCCATGGAGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: HCRSQCRLYHVQFGF*SLGVVQMGCHGGCD
Trigger: GTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp TGTACTCTCCGGGTCTGGCTCAGAGGCATTTTCAGGCAGCGTGTCTaGAATCCCTTCATCAGCAGTGTTAGGAACTGCATTAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: CTLRVWLRGIFRQRV*NPFISSVRNCIRWR
Trigger: TCTCCACCTAATGCAGTTCCTAACACTGCTGATGAAGGGATTGCAGACACGCTGCCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp TTTTCTTGCCGCTGGGGTTTGCTGCCTTCTCAATCCTACCCTTTATaGCCTGGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATGCTTG +
Preference number: 5 (lower is better)
Translates to: FSCRWGLLPSQSYPL*PGLLRTSALLSLCL
Trigger: CAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 90 bp ATGGACACACCCACAGCAGCCCTCTGCTGTCGGAGAGCTTCTTCTTaGTCCTCCAGCTGCCTCTTTTGCTCCTCAATCTGTTTATTTAGC +
Preference number: 5 (lower is better)
Translates to: MDTPTAALCCRRASS*SSSCLFCSSICLFS
Trigger: GCTAAATAAACAGATTGAGGAGCAAAAGAGGCAGCTGGAGGAGCAAGAAGAAGCTCTCCGACAGCAGAGGGCTGCTGTGGGTGTGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp GAAGTCAATGCAGGCTTTATCATGTCCAGTTTGGTTTCTGAAGCCTaGGAGTTGTCCAGATGGGCTGCCATGGAGGCTGTGACTGTGCAC +
Preference number: 5 (lower is better)
Translates to: EVNAGFIMSSLVSEA*ELSRWAAMEAVTVH
Trigger: GTGCACAGTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp TATCAGCTACTGGGCTGTCATTCTTCCCAGCAGACTGAGCACCCCTaGGGTCCTCATATTGGGATGAGCCAAGAGATGTTTCCTGAGACA +
Preference number: 5 (lower is better)
Translates to: YQLLGCHSSQQTEHP*GPHIGMSQEMFPET
Trigger: TGTCTCAGGAAACATCTCTTGGCTCATCCCAATATGAGGACCCCAGGGGTGCTCAGTCTGCTGGGAAGAATGACAGCCCAGTAGCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGTTGGGTGCTTCCTCATaGCTCAGGTGCCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLGASS*LRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAA...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCCTCTTCACCTCCTTTaGCCTTTTCAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKPLHLL*PFQKRQ
Trigger: CTGCCTCTTCTGAAAAGGCAAAAGGAGGTGAAGAGG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TACCACGCACAACTGCATTCTCACTTTGTAAACCTACGTGCAAAAGGTCCTCCCCACTCAGGCTTTGGTTaGCCCGCTTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: YHAQLHSHFVNLRAKGPPHSGFG*PASLGF
Trigger: AAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTG...GGGAGGACCTTTTGCACGTAGGTTTACAAAGTGAGAATGCAGTTGTGCGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTTCTTGCCGCTGGGGTTaGCTGCCTTCTCAATCCTAC +
Preference number: 5 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTSCRWG*LPSQSY
Trigger: GTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAAGA...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TCTTTAGAGGCAACCGGGGCGACACAGCAGTTATCCTTCCATGAAGCAGGCTGCGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: SLEATGATQQLSFHEAGCVAAAC*RMQSLL
Trigger: CAGTAATGACTGCATTCTCAAACACGCAGCAGCTAC...GCAGCCTGCTTCATGGAAGGATAACTGCTGTGTCGCCCCGGTTGCCTCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp AGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGAGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: SSWDFGSGGQGSCDNLGGVAAAC*RMQSLL
Trigger: CAGTAATGACTGCATTCTCAAACACGCAGCAGCTAC...TCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCACGCTTCTCATCTGTCTaGTCTAACTCGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSRFSSV*SNSPAL
Trigger: AAGTGCTGGCGAGTTAGACAAGACAGATGAGAAGCG...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp AGTTGCATAGACTGTGTGGTGCCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGCTGGGAAGCCAGCCTTaGGGTGATACGTACATTTAC +
Preference number: 5 (lower is better)
Translates to: SCIDCVVPSHCAEEEGSKLGSQP*GDTYIY
Trigger: GTAAATGTACGTATCACCCAAAGGCTGGCTTCCCAG...CTTTGATCCCTCTTCCTCTGCACAGTGGGAGGGCACCACACAGTCTATGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS TCA 90 bp TTGAGAGAACAGCTCTGTCTTGCCCAAAGACGACTTGGGAGGTGGTaGCATCAATGCATCGGACACAGAAAAGTGTGCCATGGACACACC +
Preference number: 5 (lower is better)
Translates to: LREQLCLAQRRLGRW*HQCIGHRKVCHGHT
Trigger: GGTGTGTCCATGGCACACTTTTCTGTGTCCGATGCATTGATGTCACCACCTCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp ACAGGGTCCTTAGCACTCAGTGGAATCAGGTACAGGTCCTTGACATaGCTGTTGTTATTAGCTACAACCCCAAAGCGACCACGGCTGCTA +
Preference number: 5 (lower is better)
Translates to: TGSLALSGIRYRSLT*LLLLATTPKRPRLL
Trigger: TAGCAGCCGTGGTCGCTTTGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp GGAAGGTGGCTGGTGTCCAGGGGTAATGAGACAGGGTTACCAGGGTaGTCACATTTTTGGATGTCATGTTCAGGTCTCAACACAGCGTTT +
Preference number: 5 (lower is better)
Translates to: GRWLVSRGNETGLPG*SHFWMSCSGLNTAF
Trigger: AAACGCTGTGTTGAGACCTGAACATGACATCCAAAAATGTGAGCACCCTGGTAACCCTGTCTCATTACCCCTGGACACCAGCCACCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TCAGGATGGCTATCGCCTGGAGACTCAGGGAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTCTCCGGGTCTGGCTCAGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: SGWLSPGDSGKHFLS*LRLDVLSGSGSEAF
Trigger: AAATGCCTCTGAGCCAGACCCGGAGAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp TGCGATTGGGCAAGTCATCAATGGTCACTTTGGCTTCTTCTAAGATaGTCTCATCTTCTGGGTCATAGGCCACCTCCTCCCTCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: CDWASHQWSLWLLLR*SHLLGHRPPPPSQL
Trigger: CAGCTGAGAGGGAGGAGGTGGCCTATGACCCAGAAGATGAGACCATCTTAGAAGAAGCCAAAGTGACCATTGATGACTTGCCCAATCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTTCTTAATGGCTGGTTaGGCTCCTGCCATATTAGAG +
Preference number: 5 (lower is better)
Translates to: EESPWIDGSRDGYTGKASFLMAG*APAILE
Trigger: CTCTAATATGGCAGGAGCCAAACCAGCCATTAAGAA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LFYGTATELLRNQVLWRSEGHGL*GMVPLK
Trigger: CTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTC...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGCAAAATGGTGCAATTaGGGCAGATGTAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSAKWCN*GRCSLP
Trigger: GGGAAGACTACATCTGCCCAAATTGCACCATTTTGC...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGTCTTGCCGCTGGGGTTaGCTGCCTTCTCAATCCTAC +
Preference number: 5 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQSCRWG*LPSQSY
Trigger: GTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAAGA...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCVAAAC*RMQSLL
Trigger: CAGTAATGACTGCATTCTCAAACACGCAGCAGCTAC...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TTCCACCGCTGCAATTGCGCACAGCCCCCAGCTCACCTCGACAATAGTGCTTTCTCCAGAACTAAAATTTaGGGCCTTAGGTTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: FHRCNCAQPPAHLDNSAFSRTKI*GLRLQR
Trigger: CCTTTGCAACCTAAGGCCCAAAATTTTAGTTCTGGA...GAAAGCACTATTGTCGAGGTGAGCTGGGGGCTGTGCGCAATTGCAGCGGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp TTCAGGCAGCGTGTCTGCAATCCCTTCATCAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTCATGCCTGGGCTTAAAGTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: FRQRVCNPFISSVRN*IRWRAVMPGLKVFL
Trigger: AAGGAAGACTTTAAGCCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCTAACACTGCTGATGAAGGGATTGCAGACACGCTGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp GTGTTTGAGAATGCAGTCATTACTGCAATACACAGAGTCAGGCTGTaGTACACTGGAACACCCAGGGCCAATGCATTTAGGAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VFENAVITAIHRVRL*YTGTPRANAFRSTR
Trigger: CCTGGTGCTCCTAAATGCATTGGCCCTGGGTGTTCCAGTGTAGCACAGCCTGACTCTGTGTATTGCAGTAATGACTGCATTCTCAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 90 bp GAAACACTTTCTCTCCTGGTTAAGACTAGATGTACTCTCCGGGTCTaGCTCAGAGGCATTTTCAGGCAGCGTGTCTGCAATCCCTTCATC +
Preference number: 5 (lower is better)
Translates to: ETLSLLVKTRCTLRV*LRGIFRQRVCNPFI
Trigger: GATGAAGGGATTGCAGACACGCTGCCTGAAAATGCCTCTGAGCCAGACCCGGAGAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 90 bp CCACACGGTCTTTGGAGCAATCCTTCCACCGATGTGGATGGTGTCTaGCAAATCCTCACTGAGATAATCCAAACACCCAGAGACAGGATA +
Preference number: 5 (lower is better)
Translates to: PHGLWSNPSTDVDGV*QILTEIIQTPRDRI
Trigger: TATCCTGTCTCTGGGTGTTTGGATTATCTCAGTGAGGATTTGCCAGACACCATCCACATCGGTGGAAGGATTGCTCCAAAGACCGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTTTGGGGATGGTACCCTaGAAGCCTGAAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDILGMVP*KPEGSF
Trigger: GAAACTGCCTTCAGGCTTCAAGGGTACCATCCCCAA...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGCCAGGCAACTTTTaGGAAGCAGCTGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWEPGNF*EAAVIG
Trigger: ACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTC...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCATTCTATCACAGATTTaGTGGGCTTCTCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: EESPWIDGSRDGYTGKASILSQI*WASLST
Trigger: TGTGGACAGAGAAGCCCACAAAATCTGTGATAGAAT...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTATCAGACAGAGCTCCTaGGACACCGATGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: ALGLGFSILASLGVCSPSIRQSS*DTDDLS
Trigger: ACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGAT...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AGCAGTTATCCTTCCATGAAGCAGGCTGCTTCACCACCATCCTCTTCGTTTCCATTGGGTGCTTCCTCATaGCTCAGGTGCCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: SSYPSMKQAASPPSSSFPLGASS*LRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAA...TGGAAACGAAGAGGATGGTGGTGAAGCAGCCTGCTTCATGGAAGGATAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GATCCAGGTAGGCCCTGTCTCTCCTCTCTAAGTTTGGTTCTTAGTCCTGACATTGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: DPGRPCLSSLSLVLSPDIVGLIA*GASSLL
Trigger: GAGCAATGAGGAAGCACCCAAGGCTATCAAACCCAC...AATGTCAGGACTAAGAACCAAACTTAGAGAGGAGAGACAGGGCCTACCTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CTGAAGGAACACCAGACCTCTCATCTCAAACTACTCAACTGCCTACAGCGCACTCCTCTTCACCTCCTTTaGCCTTTTCAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LKEHQTSHLKLLNCLQRTPLHLL*PFQKRQ
Trigger: CTGCCTCTTCTGAAAAGGCAAAAGGAGGTGAAGAGG...AGTGCGCTGTAGGCAGTTGAGTAGTTTGAGATGAGAGGTCTGGTGTTCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GGCAGAGAGGAGACACTGCTCCTCACTGATGACGACACTCTCAATGTTAGGATGGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: GREETLLLTDDDTLNVRMVAAAC*RMQSLL
Trigger: CAGTAATGACTGCATTCTCAAACACGCAGCAGCTAC...CATCCTAACATTGAGAGTGTCGTCATCAGTGAGGAGCAGTGTCTCCTCTCTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp CCCTCCCACTGTGCAGAGGAAGAGGGATCAAAGGGGACTGGTCCCATTTGGATATTTTCTGGCTTCGTCTaGACCTTTTCCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: PSHCAEEEGSKGTGPIWIFSGFV*TFSLGF
Trigger: AAAACCCAAGGAAAAGGTCAAGACGAAGCCAGAAAA...TATCCAAATGGGACCAGTCCCCTTTGATCCCTCTTCCTCTGCACAGTGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATTTTCTGGCTTCGTCTaGACCTTTTCCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: SWDFGSGGQGSCDNLGGLFSGFV*TFSLGF
Trigger: AAAACCCAAGGAAAAGGTCAAGACGAAGCCAGAAAA...TAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAGAGGGCAGCAACCCAAGTATTATATTaGGACGTGGTGATTCAAGAC +
Preference number: 5 (lower is better)
Translates to: NPSPIWSLSVCRATQRAATQVLY*DVVIQD
Trigger: GTCTTGAATCACCACGTCCAAATATAATACTTGGGT...TGCTGCCCTCTGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCTCATCAATGGTCACTTaGGCTTCTTCTAAGATGGTC +
Preference number: 5 (lower is better)
Translates to: EESPWIDGSRDGYTGKASSSMVT*ASSKMV
Trigger: GACCATCTTAGAAGAAGCCAAAGTGACCATTGATGA...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp CTCAAAGGGCAAGAGTTTGGATGGCACAGGGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTTGACATGCCTGTTGTTATTAGCTAC +
Preference number: 5 (lower is better)
Translates to: LKGQEFGWHRVLSTQ*NQVQVLDMPVVISY
Trigger: GTAGCTAATAACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: PGILGQEAKVPVTTWEDYKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...ATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGATTCTATCACAGATTTaGTGGGCTTCTCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQILSQI*WASLST
Trigger: TGTGGACAGAGAAGCCCACAAAATCTGTGATAGAAT...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTAGTGATTCTGAAATGCTaGGTGATGGTGGTACTGACA +
Preference number: 5 (lower is better)
Translates to: GVCSPSGVEYRPWGIQELVILKC*VMVVLT
Trigger: TGTCAGTACCACCATCACCAAGCATTTCAGAATCAC...TAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AGTTTAGGTGTATGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGATCAGACAGAGCTCCTaGGACACCGATGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: SLGVCSPSGVEYRPWGIQIRQSS*DTDDLS
Trigger: ACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGAT...CTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCAATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTA +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSIRYRS*TCLLLL
Trigger: TAATAACAACAGGCATGTCAAGGACCTGTACCTGAT...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVSKGKS*DGTGSL
Trigger: TAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGA...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACATTGGGTGCTTCCTCATaGCTCAGGTGCCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTLGASS*LRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAA...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGGCAAAATGGTGCAATTaGGGCAGATGTAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVAKWCN*GRCSLP
Trigger: GGGAAGACTACATCTGCCCAAATTGCACCATTTTGC...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERRWRYR*SHPALA
Trigger: TGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCG...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNRWRYR*SHPALA
Trigger: TGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCG...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp GAAGCTTCCAAACCCATCGCCTATCTGGAGTCTGTCAGTCTGCAGAGCCACTCATTTTCTGGCTTCGTCTaGACCTTTTCCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: EASKPIAYLESVSLQSHSFSGFV*TFSLGF
Trigger: AAAACCCAAGGAAAAGGTCAAGACGAAGCCAGAAAA...TGAGTGGCTCTGCAGACTGACAGACTCCAGATAGGCGATGGGTTTGGAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTTTTTCTGGCTTCGTCTaGACCTTTTCCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: WDFGSGGQGSCDNLGGLCFSGFV*TFSLGF
Trigger: AAAACCCAAGGAAAAGGTCAAGACGAAGCCAGAAAA...ACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GAGGAAAGCCCCTGGATAGACGGAAGCAGAGATGGCTACACAGGGAAAGCTAGCGAACTGACCAAACTGTaGAACAATTGGATCCAACAA +
Preference number: 5 (lower is better)
Translates to: EESPWIDGSRDGYTGKASELTKL*NNWIQQ
Trigger: TTGTTGGATCCAATTGTTCAACAGTTTGGTCAGTTC...GCTAGCTTTCCCTGTGTAGCCATCTCTGCTTCCGTCTATCCAGGGGCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 90 bp AGAGCTGTCATGCCTGGGCTTAAAGTCTTCCTTCTTAGAAGAAGCTaGAAGCTTTTGCTTCTTAGGAGCTGGTTCATCCTCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: RAVMPGLKVFLLRRS*KLLLLRSWFILRGW
Trigger: CCATCCTCGGAGGATGAACCAGCTCCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAGGAAGACTTTAAGCCCAGGCATGACAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp ACAGCAGCCCTCTGCTGTCGGAGAGCTTCTTCTTGCTCCTCCAGCTaGCTCTTTTGCTCCTCAATCTGTTTATTTAGCTCTTCTAACATT +
Preference number: 5 (lower is better)
Translates to: TAALCCRRASSCSSS*LFCSSICLFSSSNI
Trigger: AATGTTAGAAGAGCTAAATAAACAGATTGAGGAGCAAAAGAGGCAGCTGGAGGAGCAAGAAGAAGCTCTCCGACAGCAGAGGGCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 90 bp TGTACTTGGGAGGCTTCTTCTCGGATGGCAAAGCTGCAGTTACTTTaGGATAGACTGAAGTTTCTAGTTCTTCCTGTTGGAGTCGAGTCC +
Preference number: 5 (lower is better)
Translates to: CTWEASSRMAKLQLL*DRLKFLVLPVGVES
Trigger: GGACTCGACTCCAACAGGAAGAACTAGAAACTTCAGTCTATCCCAAAGTAACTGCAGCTTTGCCATCCGAGAAGAAGCCTCCCAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp GCACTGGGCTTGGGCTTCAGCATCTTAGCCAGTTTAGGTGTATGTAGTCCAAGTTTCTTAATGGCTGGTTaGGCTCCTGCCATATTAGAG +
Preference number: 5 (lower is better)
Translates to: ALGLGFSILASLGVCSPSFLMAG*APAILE
Trigger: CTCTAATATGGCAGGAGCCAAACCAGCCATTAAGAA...ACTTGGACTACATACACCTAAACTGGCTAAGATGCTGAAGCCCAAGCCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGGAGGACTATGTCAGTTAGGATCCTTAAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: DFGSGGQGSCDNLGGLCQLGSLR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTTAAGGATCCTAA...CTGACATAGTCCTCCCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp GGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGTCCTTGACATGCCTGTaGTTATTAGCTACAACCCCA +
Preference number: 5 (lower is better)
Translates to: GHPNLVPGILGQEAKVPVSLTCL*LLATTP
Trigger: TGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGA...CACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 90 bp TTTTGCTCCTCAATCTGTTTATTTAGCTCTTCTAACATTTTCTGCTaGTCTACCAGCGAAGCACTGGAGGCATCGGTGGTGAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: FCSSICLFSSSNIFC*STSEALEASVVKSA
Trigger: TGCCGACTTCACCACCGATGCCTCCAGTGCTTCGCTGGTAGAGCAGCAGAAAATGTTAGAAGAGCTAAATAAACAGATTGAGGAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTTTCTTAATGGCTGGTTaGGCTCCTGCCATATTAGAG +
Preference number: 5 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVFLMAG*APAILE
Trigger: CTCTAATATGGCAGGAGCCAAACCAGCCATTAAGAA...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGTGTCGAATTTGTGAATaGGGCTGTGATGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: MIPLTGHPNLVPGILGQECRICE*GCDGAG
Trigger: CCCAGCTCCATCACAGCCCAATTCACAAATTCGACA...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGATTCTATCACAGATTTaGTGGGCTTCTCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWILSQI*WASLST
Trigger: TGTGGACAGAGAAGCCCACAAAATCTGTGATAGAAT...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVFIMSS*VSEAWE
Trigger: CTCCCAGGCTTCAGAAACCAAACTGGACATGATAAA...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGGTGATTCTGAAATGCTaGGTGATGGTGGTACTGACA +
Preference number: 5 (lower is better)
Translates to: YGTATELLRNQVLWRSPLVILKC*VMVVLT
Trigger: TGTCAGTACCACCATCACCAAGCATTTCAGAATCAC...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGGTGATTCTGAAATGCTaGGTGATGGTGGTACTGACA +
Preference number: 5 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQVILKC*VMVVLT
Trigger: TGTCAGTACCACCATCACCAAGCATTTCAGAATCAC...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAGTGATTCTGAAATGCTaGGTGATGGTGGTACTGACA +
Preference number: 5 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTVILKC*VMVVLT
Trigger: TGTCAGTACCACCATCACCAAGCATTTCAGAATCAC...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTGAGACAAAAAGAGGGTaGTATCTCCTTCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LFYGTATELLRNQVLWRSETKRG*YLLLVG
Trigger: CCCCACCAGAAGGAGATACAACCCTCTTTTTGTCTC...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACACCTTTCCAAATCGTGTaGAGTCGAGACAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTPFQIV*SRDKKR
Trigger: CCTCTTTTTGTCTCGACTCAACACGATTTGGAAAGG...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACATCCTTGACATGCCTGTaGTTATTAGCTACAACCCCA +
Preference number: 5 (lower is better)
Translates to: HPNLVPGILGQEAKVPVTSLTCL*LLATTP
Trigger: TGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGA...TGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTCCTGTGACAACCTGGATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTA +
Preference number: 5 (lower is better)
Translates to: NLVPGILGQEAKVPVTTWIRYRS*TCLLLL
Trigger: TAATAACAACAGGCATGTCAAGGACCTGTACCTGAT...CCAGGTTGTCACAGGAACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AGTCATTTTAGGATGCTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTTATGCTGCTGTGGTaGCTGCTCACTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SHFRMLFYGTATELLRNQVMLLW*LLTGVH
Trigger: GTGGACCCCAGTGAGCAGCAACCACAGCAGCATAAC...TTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAGCATCCTAAAATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACACACTCAGGCTTTGGTTaGCCCGCTTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KELSNIFAQSDTLASLLTHSGFG*PASLGF
Trigger: AAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTG...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp CCTTCATCAGCAGTGTTAGGAACTGCATTAGGTGGAGAGCTGTCATaGCTGGGCTTAAAGTCTTCCTTCTTAGAAGAAGCTGAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: PSSAVLGTALGGELS*LGLKSSFLEEAESF
Trigger: AAAGCTTTCAGCTTCTTCTAAGAAGGAAGACTTTAAGCCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCTAACACTGCTGATGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TGTAGTCCAAGTGGTGTGGAGTACAGGCCTTGGGGTATTCAGGAGCTACTTCTATTAGGATCCTTAAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: CSPSGVEYRPWGIQELLLLGSLR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTTAAGGATCCTAA...TAGAAGTAGCTCCTGAATACCCCAAGGCCTGTACTCCACACCACTTGGACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTATTCTATCACAGATTTaGTGGGCTTCTCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPILSQI*WASLST
Trigger: TGTGGACAGAGAAGCCCACAAAATCTGTGATAGAAT...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTTGATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTA +
Preference number: 5 (lower is better)
Translates to: YGTATELLRNQVLWRSPLIRYRS*TCLLLL
Trigger: TAATAACAACAGGCATGTCAAGGACCTGTACCTGAT...CAAGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTCCCTATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTA +
Preference number: 5 (lower is better)
Translates to: SMALLLNSLGIKSCGEVPIRYRS*TCLLLL
Trigger: TAATAACAACAGGCATGTCAAGGACCTGTACCTGAT...AGGGACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACTTGGGTGCTTCCTCATaGCTCAGGTGCCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNLGASS*LRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAA...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGGCCAAGGTTAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: LTGHPNLVPGILGQEAKVKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...AACCTTGGCCTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp TGCCAGGCTGAGCCTATATACACAATAACTGACACAGGTCTTTGTCCACACCAGTTAGGATCCTTAAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: CQAEPIYTITDTGLCPHQLGSLR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTTAAGGATCCTAA...CTGGTGTGGACAAAGACCTGTGTCAGTTATTGTGTATATAGGCTCAGCCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CTTTTCTATGGCACTGCTACTGAACTCCTTAGGAATCAAGTCCTGTGGAGAAGTTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LFYGTATELLRNQVLWRSFIMSS*VSEAWE
Trigger: CTCCCAGGCTTCAGAAACCAAACTGGACATGATAAA...ACTTCTCCACAGGACTTGATTCCTAAGGAGTTCAGTAGCAGTGCCATAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp ATGATTCCACTCACTGGTCATCCTAATTTAGTTCCTGGGATTTTGGGTCAGGAGTCCTTGACATGCCTGTaGTTATTAGCTACAACCCCA +
Preference number: 5 (lower is better)
Translates to: MIPLTGHPNLVPGILGQESLTCL*LLATTP
Trigger: TGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGA...CTCCTGACCCAAAATCCCAGGAACTAAATTAGGATGACCAGTGAGTGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTACACTCAGGCTTTGGTTaGCCCGCTTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVHSGFG*PASLGF
Trigger: AAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTG...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AATGTTAGTCTAGGCCTGCAATACCACGCACAACTGCATTCTCACTTTGTAAACGCAAAATGGTGCAATTaGGGCAGATGTAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NVSLGLQYHAQLHSHFVNAKWCN*GRCSLP
Trigger: GGGAAGACTACATCTGCCCAAATTGCACCATTTTGC...GTTTACAAAGTGAGAATGCAGTTGTGCGTGGTATTGCAGGCCTAGACTAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGAGAACAGCTCTGTCTaGCCCAAAGACGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: KELSNIFAQSDTLASLLTENSSV*PKDDLG
Trigger: TCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCTC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 90 bp AAGCTCTTTAGATACAAGTTCTTCAGGCTTCATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCGAAGAACACGATGGAAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: KLFRYKFFRLHSDKF*QGDFFSKNTMEEPL
Trigger: CAGGGGCTCTTCCATCGTGTTCTTCGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAGAACTTGTATCTAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACAGAGCCAGGCAACTTTTaGGAAGCAGCTGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: KELSNIFAQSDTLASLLTEPGNF*EAAVIG
Trigger: ACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTC...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp CCGATTATGGCTTCACAGAACATACTAACAGACTTTACTTTTGAAATGTGCTGGGAGCCAGGCAACTTTTaGGAAGCAGCTGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: PIMASQNILTDFTFEMCWEPGNF*EAAVIG
Trigger: ACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTC...CCAGCACATTTCAAAAGTAAAGTCTGTTAGTATGTTCTGTGAAGCCATAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCATCTTGCCGCTGGGGTTaGCTGCCTTCTCAATCCTAC +
Preference number: 5 (lower is better)
Translates to: ILTDFTFEMCWALKSSSASCRWG*LPSQSY
Trigger: GTAGGATTGAGAAGGCAGCAAACCCCAGCGGCAAGA...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp AAGGAACTATCAAACATATTTGCACAGTCAGATACGTTAGCCAGCCTTCTTACATGGGGCTTGCTGTTCTaGAGAGAACAGCTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: KELSNIFAQSDTLASLLTWGLLF*REQLCL
Trigger: AAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCCA...TGTAAGAAGGCTGGCTAACGTATCTGACTGTGCAAATATGTTTGATAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp TTTACTGCATTTCTTAGGTCTTTTACATTCCCTCCCACTTGCCCTAGAGAAAGGTTTTCTGGCTTCGTCTaGACCTTTTCCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: FTAFLRSFTFPPTCPRERFSGFV*TFSLGF
Trigger: AAAACCCAAGGAAAAGGTCAAGACGAAGCCAGAAAA...CCTTTCTCTAGGGCAAGTGGGAGGGAATGTAAAAGACCTAAGAAATGCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS-3UTR CAA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTAGAGCCAGGCAACTTTTaGGAAGCAGCTGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVEPGNF*EAAVIG
Trigger: ACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTC...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CCGATTATGGCTTCACAGAACATACTAACAGACTTTACTTTTGAAATGTGCTGGTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PIMASQNILTDFTFEMCWFIMSS*VSEAWE
Trigger: CTCCCAGGCTTCAGAAACCAAACTGGACATGATAAA...CCAGCACATTTCAAAAGTAAAGTCTGTTAGTATGTTCTGTGAAGCCATAATCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS TCA 90 bp TCTGTCTTGTCTAACTCGCCAGCACTTGAAGGACGTTTCACTTTCTaGCATATTACTAACCCAAGTATTATATTTGGACGTGGTGATTCA +
Preference number: 5 (lower is better)
Translates to: SVLSNSPALEGRFTF*HITNPSIIFGRGDS
Trigger: TGAATCACCACGTCCAAATATAATACTTGGGTTAGTAATATGTCAGAAAGTGAAACGTCCTTCAAGTGCTGGCGAGTTAGACAAGACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS-3UTR CAA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCAGCAAAATGGTGCAATTaGGGCAGATGTAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ILTDFTFEMCWALKSSSAAKWCN*GRCSLP
Trigger: GGGAAGACTACATCTGCCCAAATTGCACCATTTTGC...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp CATTTAACCCAGCATTATGACACAAACCAACACTTAATGTACACATACTGTGTAAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: HLTQHYDTNQHLMYTYCVKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...TACACAGTATGTGTACATTAAGTGTTGGTTTGTGTCATAATGCTGGGTTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS-3UTR CAA 90 bp ATACTAACAGACTTTACTTTTGAAATGTGCTGGGCACTAAAATCATCTAGTGCATTAGGATCCTTAAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: ILTDFTFEMCWALKSSSALGSLR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTTAAGGATCCTAA...TGCACTAGATGATTTTAGTGCCCAGCACATTTCAAAAGTAAAGTCTGTTAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037764.12
ENSMUST00000103057.8
CDS GCA 72 bp CAGGCTTCTGGTCCCGAGGGCTCTCTCTGCTCTTGCTaGGGTCCTTCCGGTCCCGGCCTCGGTCCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QASGPEGSLCSC*GPSGPGLGPCP
Trigger: GGGACAGGGACCGAGGCCGGGACCGGAAGGACCGCAGCAAGAGCAGAGAGAGCCCTCGGGACCAGAAGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp GCCTCAGGCTTCTGGTCCCGAGGGCTCTCTCTGCTCTaGCTGCGGTCCTTCCGGTCCCGGCCTCGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: ASGFWSRGLSLL*LRSFRSRPRSL
Trigger: CAGGGACCGAGGCCGGGACCGGAAGGACCGCAGCAAGAGCAGAGAGAGCCCTCGGGACCAGAAGCCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CCTCAGGCTTCTGGTCCCGAGGGCTCTCTCTGCTCTTaGTGCGGTCCTTCCGGTCCCGGCCTCGGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: PQASGPEGSLCS*CGPSGPGLGPC
Trigger: ACAGGGACCGAGGCCGGGACCGGAAGGACCGCAGCAAGAGCAGAGAGAGCCCTCGGGACCAGAAGCCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp TCCTGGCCTCAGGCTTCTGGTCCCGAGGGCTCTCTCTaGTCTTGCTGCGGTCCTTCCGGTCCCGGCCTCGGT +
Preference number: 6 (lower is better)
Translates to: SWPQASGPEGSL*SCCGPSGPGLG
Trigger: ACCGAGGCCGGGACCGGAAGGACCGCAGCAAGAGCAGAGAGAGCCCTCGGGACCAGAAGCCTGAGGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp CCAGCCCAGGCCCCTGGACTACTGCAGTCCCAGCAGGAGTCTCCCTaGCAGGTAGGGTGCCTTGTGGGCCAGGTGTGCTTCCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PAQAPGLLQSQQESP*QVGCLVGQVCFLWG
Trigger: CCCCCACAGGAAGCACACCTGGCCCACAAGGCACCCTACCTGCAAGGGAGACTCCTGCTGGGACTGCAGTAGTCCAGGGGCCTGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CTGCAGTCCCAGCAGGAGTCTCCCTTGCAGGTAGGGTaGCTTGTGGGCCAGGTGTGCTTCCTGTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: LQSQQESPLQVG*LVGQVCFLWGP
Trigger: GGGCCCCCACAGGAAGCACACCTGGCCCACAAGGCACCCTACCTGCAAGGGAGACTCCTGCTGGGACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CTGCGGCGCAGGGAGAGGTTATGCTGCTGTGGTTGCTaGTCACTGGGGTCCACCTCCGTGTCTCCTGCACCC +
Preference number: 6 (lower is better)
Translates to: LRRRERLCCCGC*SLGSTSVSPAP
Trigger: GGGTGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp GGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTaGTGTGGTTGCTGCTCACTGGGGTCCACCTCCGTG +
Preference number: 6 (lower is better)
Translates to: GCRPLRRRERLC*CGCCSLGSTSV
Trigger: CACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp TGGCCTTTGCCTTCTCGGAACTCTGATGTGGCCCACTaGCCGTCGGCCTCATGGCCCTGTCCAGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: WPLPSRNSDVAH*PSASWPCPGPA
Trigger: TGCTGGGCCTGGACAGGGCCATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTTGGTaGCGAGTTCACTCTCTGCTCTTCGAACTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: QGRRCPLAGKPW*RVHSLLFELLG
Trigger: CCCCAGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TTCAGGAAAGGGTGCAGGGCCCCTTGGTCCTCCATATaGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCT +
Preference number: 6 (lower is better)
Translates to: FRKGCRAPWSSI*QGRRCPLAGKP
Trigger: AGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCATATGGAGGACCAAGGGGCCCTGCACCCTTTCCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTGGTTaGTGCTCACTGGGGTCCACCTCCGTGTCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: PLRRRERLCCCG*CSLGSTSVSPA
Trigger: TGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp TCTCGCTCTCGCCTCCTATCCTCAAATGCCCGGCCCTaGCGGCTTTCCAACCCTTGGGCTTCAGGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SRSRLLSSNARP*RLSNPWASGSS
Trigger: GGACGAGCCTGAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGATAGGAGGCGAGAGCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TGGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTTaGTGGCGAGTTCACTCTCTGCTCTTCGAACTGCTG +
Preference number: 6 (lower is better)
Translates to: WQGRRCPLAGKP*WRVHSLLFELL
Trigger: CAGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp GTCCTCCATATGGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTaGGTGGCGAGTTCACTCTCTGCTCTTCGAACTGCTGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: VLHMAGAPMPSGRQT*VASSLSALRTAGAE
Trigger: TTCAGCCCCAGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCATATGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp CCTGGGAGTTGTCCAGATGGGCTGCCATGGAGGCTGTaGCTGTGCACGACCCACTCAGGGCAGTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: PGSCPDGLPWRL*LCTTHSGQFWG
Trigger: ACCCCAGAACTGCCCTGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp TTTGGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATaGTGCTGTGGTTGCTGCTCACTGGGGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: FGCRPLRRRERL*CCGCCSLGSTS
Trigger: GGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp TCTGCCTCTCTCTCGCTCTCGCCTCCTATCCTCAAATaGCCGGCCCTGCCGGCTTTCCAACCCTTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: SASLSLSPPILK*PALPAFQPLGF
Trigger: GAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGATAGGAGGCGAGAGCGAGAGAGAGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GCTGGCCTGGCTGCGCCATCCCCAGCTGTAGGAAGGTaGCTGGTGTCCAGGGGTAATGAGACAGGGTTACCA +
Preference number: 6 (lower is better)
Translates to: AGLAAPSPAVGR*LVSRGNETGLP
Trigger: TGGTAACCCTGTCTCATTACCCCTGGACACCAGCCACCTTCCTACAGCTGGGGATGGCGCAGCCAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp ACGTGGGCCCACGAAATGACCAGGAGGTGGTCCCCTTaGGGCTCCAAACTGAGAGGGTGGAGGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: TWAHEMTRRWSP*GSKLRGWRSST
Trigger: CGTGGAGGACCTCCACCCTCTCAGTTTGGAGCCCAAAGGGGACCACCTCCTGGTCATTTCGTGGGCCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp ATGGCAGGGGCGCCGATGCCCTCTGGCCGGCAAACCTaGGTGGCGAGTTCACTCTCTGCTCTTCGAACTGCT +
Preference number: 6 (lower is better)
Translates to: MAGAPMPSGRQT*VASSLSALRTA
Trigger: AGCAGTTCGAAGAGCAGAGAGTGAACTCGCCACCAAGGTTTGCCGGCCAGAGGGCATCGGCGCCCCTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp CTCTCGCGGCTCCGGTCCCATTCCTTAGCCCTGTCGTaGTCTCGCTCCCTGTCCCTGTTGGAGCTCCTATCC +
Preference number: 6 (lower is better)
Translates to: LSRLRSHSLALS*SRSLSLLELLS
Trigger: GGATAGGAGCTCCAACAGGGACAGGGAGCGAGACAACGACAGGGCTAAGGAATGGGACCGGAGCCGCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp GGGGGCCCTAGGAAGGGATTCATTCTCTGTGTTTTCTaGAGCGAGCCGCCTGGCCTGCCTTGGGTCCCTACT +
Preference number: 6 (lower is better)
Translates to: GGPRKGFILCVF*SEPPGLPWVPT
Trigger: AGTAGGGACCCAAGGCAGGCCAGGCGGCTCGCTGCAGAAAACACAGAGAATGAATCCCTTCCTAGGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GCAGGGAGAGGTTATGCTGCTGTGGTTGCTGCTCACTaGGGTCCACCTCCGTGTCTCCTGCACCCTCACGTT +
Preference number: 6 (lower is better)
Translates to: AGRGYAAVVAAH*GPPPCLLHPHV
Trigger: AACGTGAGGGTGCAGGAGACACGGAGGTGGACCCCAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp ATTGACTCCTTGGCTTCTGCTGCCAGCCCAGGCCCCTaGACTACTGCAGTCCCAGCAGGAGTCTCCCTTGCA +
Preference number: 6 (lower is better)
Translates to: IDSLASAASPGP*TTAVPAGVSLA
Trigger: TGCAAGGGAGACTCCTGCTGGGACTGCAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TTTCACCTGGAGCCCAGGGAACAGCCATTGACTCCTTaGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACTG +
Preference number: 6 (lower is better)
Translates to: FHLEPREQPLTP*LLLPAQAPGLL
Trigger: CAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp AACACAGCGTTTTCACCTGGAGCCCAGGGAACAGCCATTGACTCCTaGGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACTGCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: NTAFSPGAQGTAIDS*ASAASPGPWTTAVP
Trigger: TGGGACTGCAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAAACGCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp CAGGTCTCAACACAGCGTTTTCACCTGGAGCCCAGGGAACAGCCATaGACTCCTTGGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACTG +
Preference number: 6 (lower is better)
Translates to: QVSTQRFHLEPREQP*TPWLLLPAQAPGLL
Trigger: CAGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAAACGCTGTGTTGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp CACGGTGCTGGCTTGTGGTGTCCTTCAGCATGCTGCTaGAGACGTCCAGGAGAGGTGCTGCGCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: HGAGLWCPSACC*RRPGEVLRSSQ
Trigger: CTGAGAAGAGCGCAGCACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGGACACCACAAGCCAGCACCGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS TCA 72 bp CTCCAACAGGGGCCTCGGGGGAGGCTTCACGGGCTGTaGAGATGGGCCTTGAAAGTGAAATCGAGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: LQQGPRGRLHGL*RWALKVKSRRW
Trigger: CCACCTTCTCGATTTCACTTTCAAGGCCCATCTTCACAGCCCGTGAAGCCTCCCCCGAGGCCCCTGTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp GCTCCTATATTCATGGCCTTTGCCTTCTCGGAACTCTaGTGTGGCCCACTGCCCGTCGGCCTCATGGCCCTG +
Preference number: 6 (lower is better)
Translates to: APIFMAFAFSEL*CGPLPVGLMAL
Trigger: CAGGGCCATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp GTGCCATCAGCACCCACAGATCTGCACCCAGAGTCCTaGTCATCGGTGGCGCTACCGTTTGTCTCATCCTGC +
Preference number: 6 (lower is better)
Translates to: VPSAPTDLHPES*SSVALPFVSSC
Trigger: GCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp TGCTTGTGCAGTCTGTGCCATCAGCACCCACAGATCTaGACCCAGAGTCCTGCTCATCGGTGGCGCTACCGT +
Preference number: 6 (lower is better)
Translates to: CLCSLCHQHPQI*TQSPAHRWRYR
Trigger: ACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp GTCACTTGCCCAGGATGGTGTGCTGCTCTCACAGGCTaGCTCCTTCCCAGAAGTCTCACTCCTGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: VTCPGWCAALTG*LLPRSLTPGSQ
Trigger: CTGGCTTCCAGGAGTGAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp TGGAGCTGGGCTCACAGGACCAAGCCGTCCTGGGGCTaGAGAAGCAGCAGGAACATTGGCAGACATTGGCTT +
Preference number: 6 (lower is better)
Translates to: WSWAHRTKPSWG*RSSRNIGRHWL
Trigger: AAGCCAATGTCTGCCAATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCTGTGAGCCCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp AAAGGGTGCCCTGTTCCCCATGAACTGGGCCTGATCTaGCCCTTCACACTGAGCAGGGGCACCTGTCATCTC +
Preference number: 6 (lower is better)
Translates to: KGCPVPHELGLI*PFTLSRGTCHL
Trigger: GAGATGACAGGTGCCCCTGCTCAGTGTGAAGGGCCAGATCAGGCCCAGTTCATGGGGAACAGGGCACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CACCCAGAGAGGCTCCACAGGCTAGGCAGGAACACCTaGGGTCCAGAGGCATCTTGGTATCTGCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: HPERLHRLGRNT*GPEASWYLLLA
Trigger: AGCCAGAAGCAGATACCAAGATGCCTCTGGACCCCAGGTGTTCCTGCCTAGCCTGTGGAGCCTCTCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CAA 72 bp GAAGTGCCTGACAGGGTGGCTGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAGCCTGAAGGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: EVPDRVAEGHGL*GMVPLKPEGSF
Trigger: GAAACTGCCTTCAGGCTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTCAGCCACCCTGTCAGGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp TTTTCACCTGGAGCCCAGGGAACAGCCATTGACTCCTaGGCTTCTGCTGCCAGCCCAGGCCCCTGGACTACT +
Preference number: 6 (lower is better)
Translates to: FSPGAQGTAIDS*ASAASPGPWTT
Trigger: AGTAGTCCAGGGGCCTGGGCTGGCAGCAGAAGCCAAGGAGTCAATGGCTGTTCCCTGGGCTCCAGGTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp CTCACAGGACCAAGCCGTCCTGGGGCTGGAGAAGCAGCAGGAACATaGGCAGACATTGGCTTCCTGGTAACTCCCACCACAGCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LTGPSRPGAGEAAGT*ADIGFLVTPTTAAE
Trigger: CTCTGCTGCTGTGGTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTTGGTCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp CCCCATAGGGAGGTGGCCCATGTTGCCCAGAGAATAAGGAAGGGATaGGTGGCTTCTGTGCCCCAAATCTGGCAGGTGGAGGGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PHREVAHVAQRIRKG*VASVPQIWQVEGLL
Trigger: CAAGAGGCCCTCCACCTGCCAGATTTGGGGCACAGAAGCCACCAATCCCTTCCTTATTCTCTGGGCAACATGGGCCACCTCCCTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp CCAGGCAGCCACCCAGATGATGGGAGGGGCCTGGGAAGCCAGCCTTaGGGTGATACGTACATTTACTCAATAGGGTGGGCGAGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: PGSHPDDGRGLGSQP*GDTYIYSIGWARVQ
Trigger: CTGCACTCTCGCCCACCCTATTGAGTAAATGTACGTATCACCCAAAGGCTGGCTTCCCAGGCCCCTCCCATCATCTGGGTGGCTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CAA 90 bp TGCCTGGCAGAAGTGCCTGACAGGGTGGCTGAGGGCCATGGCCTCTaGGGGATGGTACCCTTGAAGCCTGAAGGCAGTTTCTTAATGGCT +
Preference number: 6 (lower is better)
Translates to: CLAEVPDRVAEGHGL*GMVPLKPEGSFLMA
Trigger: AGCCATTAAGAAACTGCCTTCAGGCTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTCAGCCACCCTGTCAGGCACTTCTGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp GTTGGTGTTCGGGGCTCCCTGACTTGGGTCTGGGGCTTGCTGTTCTaGAGAGAACAGCTCTGTCTTGCCCAAAGACGACTTGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VGVRGSLTWVWGLLF*REQLCLAQRRLGRW
Trigger: CCACCTCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCCAGACCCAAGTCAGGGAGCCCCGAACACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp TCTGGCCTCCAAACTGAAAGGGTGCCCTGTTCCCCATaGACTGGGCCTGATCTGGCCCTTCACACTGAGCAG +
Preference number: 6 (lower is better)
Translates to: SGLQTERVPCSP*TGPDLALHTEQ
Trigger: CTGCTCAGTGTGAAGGGCCAGATCAGGCCCAGTTCATGGGGAACAGGGCACCCTTTCAGTTTGGAGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp TTTTTGGAAGCAGCTGTCATAGGTGTTGGTCCTGCCTaGCTGGCAGAAGTGCCTGACAGGGTGGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: FLEAAVIGVGPA*LAEVPDRVAEG
Trigger: GCCCTCAGCCACCCTGTCAGGCACTTCTGCCAGGCAGGCAGGACCAACACCTATGACAGCTGCTTCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp ACTGGGACCATGATGACCCGACATCCCAAAAGTGCGTaGTGCAGGTTCACGCTGGCCAGGAAACTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: TGTMMTRHPKSA*CRFTLARKLRL
Trigger: CAGCCTCAGTTTCCTGGCCAGCGTGAACCTGCACCACGCACTTTTGGGATGTCGGGTCATCATGGTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CTCCCCATGAGGATCCTTGCGGTCTTCAAATTGGGCTaGTGCTCCTCCTCGGGGCCCACCAAGATAAGAAGG +
Preference number: 6 (lower is better)
Translates to: LPMRILAVFKLG*CSSSGPTKIRR
Trigger: CCTTCTTATCTTGGTGGGCCCCGAGGAGGAGCACCAGCCCAATTTGAAGACCGCAAGGATCCTCATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TATATTCATGGCCTTTGCCTTCTCGGAACTCTGATGTaGCCCACTGCCCGTCGGCCTCATGGCCCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: YIHGLCLLGTLM*PTARRPHGPVQ
Trigger: CTGGACAGGGCCATGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp GGCTTCCTGGTAACTCCCACCACAGCAGCAGAGCCAGGCAACTTTTaGGAAGCAGCTGTCATAGGTGTTGGTCCTGCCTGCCTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: GFLVTPTTAAEPGNF*EAAVIGVGPACLAE
Trigger: TTCTGCCAGGCAGGCAGGACCAACACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTCTGCTGCTGTGGTGGGAGTTACCAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp TCCCTCTGTCTCCCTTCAAAAGCTGGGCTCCTATATTCATGGCCTTaGCCTTCTCGGAACTCTGATGTGGCCCACTGCCCGTCGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SLCLPSKAGLLYSWP*PSRNSDVAHCPSAS
Trigger: TGAGGCCGACGGGCAGTGGGCCACATCAGAGTTCCGAGAAGGCAAAGGCCATGAATATAGGAGCCCAGCTTTTGAAGGGAGACAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CTTCTACCCTCTCAGTACGTTTTGGTTGCCGTCCACTaGGGCGCAGGGAGAGGTTATGCTGCTGTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: LLPSQYVLVAVH*GAGRGYAAVVA
Trigger: AGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAGAGGGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTTCCTCTCTGCGCTTCTTCCTCAGGCGATTCTGACTaGCTCTCAGGGACCTCTCCACAGGTTCTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LPLCASSSGDSD*LSGTSPQVLAL
Trigger: GAGAGCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAAGAAGCGCAGAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTAGCCTCAGGCTCCTGCTTACAGAGAGGTCTGTCCTaGTCGGCACTGCCTATTTGGACACTCCCAGTTTCG +
Preference number: 6 (lower is better)
Translates to: LASGSCLQRGLS*SALPIWTLPVS
Trigger: CGAAACTGGGAGTGTCCAAATAGGCAGTGCCGAGCAGGACAGACCTCTCTGTAAGCAGGAGCCTGAGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp GCAGGAACACCTGGGGTCCAGAGGCATCTTGGTATCTaGTTCTGGCTGGCAGTGAGCTGCTGGCTACTATCA +
Preference number: 6 (lower is better)
Translates to: AGTPGVQRHLGI*FWLAVSCWLLS
Trigger: TGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGCAGATACCAAGATGCCTCTGGACCCCAGGTGTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CCA 72 bp GCCACCCAGAGACGAGGGCTCAGGATGGCTATCGCCTaGAGACTCAGGGAAACACTTTCTCTCCTGGTTAAG +
Preference number: 6 (lower is better)
Translates to: ATQRRGLRMAIA*RLRETLSLLVK
Trigger: CTTAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAGCCATCCTGAGCCCTCGTCTCTGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp TCCAGTTTGGTTTCTGAAGCCTGGGAGTTGTCCAGATaGGCTGCCATGGAGGCTGTGACTGTGCACGACCCA +
Preference number: 6 (lower is better)
Translates to: SSLVSEAWELSR*AAMEAVTVHDP
Trigger: TGGGTCGTGCACAGTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp AGGCTGTGGCTCTCTGCTGTCCTCCATATCAGCTACTaGGCTGTCATTCTTCCCAGCAGACTGAGCACCCCT +
Preference number: 6 (lower is better)
Translates to: RLWLSAVLHISY*AVILPSRLSTP
Trigger: AGGGGTGCTCAGTCTGCTGGGAAGAATGACAGCCCAGTAGCTGATATGGAGGACAGCAGAGAGCCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TCCTCAAATGCCCGGCCCTGCCGGCTTTCCAACCCTTaGGCTTCAGGCTCGTCCAGAGGCTTTTCTTTAGAT +
Preference number: 6 (lower is better)
Translates to: SSNARPCRLSNP*ASGSSRGFSLD
Trigger: ATCTAAAGAAAAGCCTCTGGACGAGCCTGAAGCCCAAGGGTTGGAAAGCCGGCAGGGCCGGGCATTTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp GAGGTGGCCCATGTTGCCCAGAGAATAAGGAAGGGATaGGTGGCTTCTGTGCCCCAAATCTGGCAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: EVAHVAQRIRKG*VASVPQIWQVE
Trigger: CTCCACCTGCCAGATTTGGGGCACAGAAGCCACCAATCCCTTCCTTATTCTCTGGGCAACATGGGCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp CTCCCAGAAACTGGGTGCTTACCTGGGCCCTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: LPETGCLPGPSKGKS*DGTGSLALSGIRYR
Trigger: CCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTTTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp CCGAACCGTGGTAAGAAACTCTTCTACCCTCTCAGTACGTTTTGGTaGCCGTCCACTGCGGCGCAGGGAGAGGTTATGCTGCTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: PNRGKKLFYPLSTFW*PSTAAQGEVMLLWL
Trigger: CAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAGAGGGTAGAAGAGTTTCTTACCACGGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 72 bp GAATCTTCCTCTCTGCGCTTCTTCCTCAGGCGATTCTaGCTGCCTCTCAGGGACCTCTCCACAGGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: ESSSLRFFLRRF*LPLRDLSTGSC
Trigger: GCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAAGAAGCGCAGAGAGGAAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTTCTCCGGACTTCTGCTCTACTGTCCCTATGCTTGTaGAGTCTGTGCCATCAGCACCCACAGATCTGCACC +
Preference number: 6 (lower is better)
Translates to: LLRTSALLSLCL*SLCHQHPQICT
Trigger: GGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CCTGGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATaGTTGTGCAGTCTGTGCCATCAGCACCCACAGATC +
Preference number: 6 (lower is better)
Translates to: PGLLRTSALLSL*LCSLCHQHPQI
Trigger: GATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CGCTGGGGTTTGCTGCCTTCTCAATCCTACCCTTTATaGCCTGGTCTTCTCCGGACTTCTGCTCTACTGTCC +
Preference number: 6 (lower is better)
Translates to: RWGLLPSQSYPL*PGLLRTSALLS
Trigger: GGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CATTGTAGTTGTGGTCACTTGCCCAGGATGGTGTGCTaGTCTCACAGGCTGCCTCCTTCCCAGAAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: HCSCGHLPRMVC*SHRLPPSQKSH
Trigger: GTGAGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CAGCATTGTAGTTGTGGTCACTTGCCCAGGATGGTGTaGTGCTCTCACAGGCTGCCTCCTTCCCAGAAGTCT +
Preference number: 6 (lower is better)
Translates to: QHCSCGHLPRMV*CSHRLPPSQKS
Trigger: AGACTTCTGGGAAGGAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTTCTCTGGCTTCACAGCATTGTAGTTGTGGTCACTTaGCCAGGATGGTGTGCTGCTCTCACAGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: LLWLHSIVVVVT*PGWCAALTGCL
Trigger: GAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTGTGAAGCCAGAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp GAAAACTGGGACCATGATGACCCGACATCCCAAAAGTaGGTGGTGCAGGTTCACGCTGGCCAGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: ENWDHDDPTSQK*VVQVHAGQETE
Trigger: CTCAGTTTCCTGGCCAGCGTGAACCTGCACCACGCACTTTTGGGATGTCGGGTCATCATGGTCCCAGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GAAATGTATGCAACCTCCTCCTCCTCAGTGGCAGGGTaGAAGCGGATCAGACAGAGCTCCTTGGACACCGAT +
Preference number: 6 (lower is better)
Translates to: EMYATSSSSVAG*KRIRQSSLDTD
Trigger: ATCGGTGTCCAAGGAGCTCTGTCTGATCCGCTTCCACCCTGCCACTGAGGAGGAGGAGGTTGCATACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp TGTTGTGAGGCTGGCGGCAGATGCAGTACAGGGCATTaGGGTCGTAAACCTCACACTCAGGCTTTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: CCEAGGRCSTGH*GRKPHTQALVC
Trigger: GCAAACCAAAGCCTGAGTGTGAGGTTTACGACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTCACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp CACCCACAGATCTGCACCCAGAGTCCTGCTCATCGGTaGCGCTACCGTTTGTCTCATCCTGCACTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: HPQICTQSPAHR*RYRLSHPALAK
Trigger: TTTTGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp GTTGTGGTTGGTGTTCGGGGCTCCCTGACTTGGGTCTaGGGCTTGCTGTTCTTGAGAGAACAGCTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: VVVGVRGSLTWV*GLLFLREQLCL
Trigger: AAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCCAGACCCAAGTCAGGGAGCCCCGAACACCAACCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TTGGGTCCCTACTTTGTCTTGAGTCTAGGTTGTGGTTaGTGTTCGGGGCTCCCTGACTTGGGTCTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: LGPYFVLSLGCG*CSGLPDLGLGL
Trigger: AAGCCCCAGACCCAAGTCAGGGAGCCCCGAACACCAACCACAACCTAGACTCAAGACAAAGTAGGGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CATCTTGGTATCTGCTTCTGGCTGGCAGTGAGCTGCTaGCTACTATCAGCACCAGAACACCCAGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: HLGICFWLAVSC*LLSAPEHPGLW
Trigger: CCAGAGTCCTGGGTGTTCTGGTGCTGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGCAGATACCAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CAA 72 bp ACTGGGTGCTTACCTGGGCCCTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTAGCACTCAGTGGAATC +
Preference number: 6 (lower is better)
Translates to: TGCLPGPSKGKS*DGTGSLALSGI
Trigger: GATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp AGAGTCTGCAGGATGTGTTCCAGGGGCGAGGCTGTTTaGGAAGTGGCAGCAGTAACAGGGGAAGCTGTGGTA +
Preference number: 6 (lower is better)
Translates to: RVCRMCSRGEAV*EVAAVTGEAVV
Trigger: TACCACAGCTTCCCCTGTTACTGCTGCCACTTCCAAAACAGCCTCGCCCCTGGAACACATCCTGCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp TCTCTGTGTTTTCTGCAGCGAGCCGCCTGGCCTGCCTaGGGTCCCTACTTTGTCTTGAGTCTAGGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: SLCFLQRAAWPA*GPYFVLSLGCG
Trigger: ACCACAACCTAGACTCAAGACAAAGTAGGGACCCAAGGCAGGCCAGGCGGCTCGCTGCAGAAAACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp AGGCTCCTGCTTACAGAGAGGTCTGTCCTGCTCGGCACTGCCTATTaGGACACTCCCAGTTTCGGCAGAATCTTCCTCTCTGCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: RLLLTERSVLLGTAY*DTPSFGRIFLSALL
Trigger: AAGAAGCGCAGAGAGGAAGATTCTGCCGAAACTGGGAGTGTCCAAATAGGCAGTGCCGAGCAGGACAGACCTCTCTGTAAGCAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp TTATGCCCTGGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATGCTaGTGCAGTCTGTGCCATCAGCACCCACAGATCTGCACCCAGAGT +
Preference number: 6 (lower is better)
Translates to: LCPGLLRTSALLSLC*CSLCHQHPQICTQS
Trigger: ACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 72 bp TTTCAACGCTCCCCTCGGAAGCTGTCTCCACATCAGTaGCTGTGGAAGATGTGGGCTCACTGGAATCCTCCA +
Preference number: 6 (lower is better)
Translates to: FQRSPRKLSPHQ*LWKMWAHWNPP
Trigger: TGGAGGATTCCAGTGAGCCCACATCTTCCACAGTCACTGATGTGGAGACAGCTTCCGAGGGGAGCGTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 72 bp TCTATGTCATCTGTCTCTGACTGGGACACTGGTCCCTaGCTAGCCTCAGGCTCCTGCTTACAGAGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SMSSVSDWDTGP*LASGSCLQRGL
Trigger: CAGACCTCTCTGTAAGCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCAGTCAGAGACAGATGACATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp GCAGGCTTTATCATGTCCAGTTTGGTTTCTGAAGCCTaGGAGTTGTCCAGATGGGCTGCCATGGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: AGFIMSSLVSEA*ELSRWAAMEAV
Trigger: CACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp GTGCTTACCTGGGCCCTCAAAGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTA +
Preference number: 6 (lower is better)
Translates to: VLTWALKGQEFG*HRVLSTQWNQV
Trigger: TACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037764.12
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp CGTGGTAAGAAACTCTTCTACCCTCTCAGTACGTTTTaGTTGCCGTCCACTGCGGCGCAGGGAGAGGTTATG +
Preference number: 6 (lower is better)
Translates to: RGKKLFYPLSTF*LPSTAAQGEVM
Trigger: CATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAGAGGGTAGAAGAGTTTCTTACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp AAACCTCACACTCAGGCTTTGGTTTGCCCGCTTCCCTaGGGTTTTCCTCTGTATTTCCCTGAGTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KPHTQALVCPLP*GFPLYFPESPS
Trigger: GGAAGGCGACTCAGGGAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAACCAAAGCCTGAGTGTGAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp CCCTCCTGTCATCCTTCATGGATTTACTCAATAGGGTaGGCGAGAGTGCAGTGGGCTTCTCTGGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: PSCHPSWIYSIG*ARVQWASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATCCATGAAGGATGACAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp TGTCTCAGACACACTCTGCACATCATGAGGCCTCCCTaGCTCAGCGAGCAGTGTATGAAATGCTCGATCAGG +
Preference number: 6 (lower is better)
Translates to: CLRHTLHIMRPP*LSEQCMKCSIR
Trigger: CCTGATCGAGCATTTCATACACTGCTCGCTGAGCCAGGGAGGCCTCATGATGTGCAGAGTGTGTCTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GGGATTCATTCTCTGTGTTTTCTGCAGCGAGCCGCCTaGCCTGCCTTGGGTCCCTACTTTGTCTTGAGTCTA +
Preference number: 6 (lower is better)
Translates to: GIHSLCFLQRAA*PALGPYFVLSL
Trigger: TAGACTCAAGACAAAGTAGGGACCCAAGGCAGGCCAGGCGGCTCGCTGCAGAAAACACAGAGAATGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CTGGGCTGTCATTCTTCCCAGCAGACTGAGCACCCCTaGGGTCCTCATATTGGGATGAGCCAAGAGATGTTT +
Preference number: 6 (lower is better)
Translates to: LGCHSSQQTEHP*GPHIGMSQEMF
Trigger: AAACATCTCTTGGCTCATCCCAATATGAGGACCCCAGGGGTGCTCAGTCTGCTGGGAAGAATGACAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp AGGGATTGGTGGCTTCTGTGCCCCAAATCTGGCAGGTaGAGGGCCTCTTGGTCCATCACTATTAGGAACAAG +
Preference number: 6 (lower is better)
Translates to: RDWWLLCPKSGR*RASWSITIRNK
Trigger: CTTGTTCCTAATAGTGATGGACCAAGAGGCCCTCCACCTGCCAGATTTGGGGCACAGAAGCCACCAATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp GGTGATTCAAGACCTGGGCCCTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTAGCACTCAGTGGAATC +
Preference number: 6 (lower is better)
Translates to: GDSRPGPSKGKS*DGTGSLALSGI
Trigger: GATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTCTTGAATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp AATGCAGGCTTTATCATGTCCAGTTTGGTTTCTGAAGCCTGGGAGTaGTCCAGATGGGCTGCCATGGAGGCTGTGACTGTGCACGACCCA +
Preference number: 6 (lower is better)
Translates to: NAGFIMSSLVSEAWE*SRWAAMEAVTVHDP
Trigger: TGGGTCGTGCACAGTCACAGCCTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp CCACAGATCTGCACCCAGAGTCCTGCTCATCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCAAAATGGTGCAATTTGGGCAGATGT +
Preference number: 6 (lower is better)
Translates to: PQICTQSPAHRWRYR*SHPALAKWCNLGRC
Trigger: ACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp TTTGGACGTGGTGATTCAAGACCTGGGCCCTCAAAGGGCAAGAGTTaGGATGGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: FGRGDSRPGPSKGKS*DGTGSLALSGIRYR
Trigger: CCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTCTTGAATCACCACGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp ATTGCTGCTGTGGTAGGCGCTGTGACAGTGCTGGTGGACCCTGGCTaGAGGGATGACAGTATTTTCAATACTGGGGGTTCAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: IAAVVGAVTVLVDPG*RDDSIFNTGGSGRG
Trigger: TCCTCTTCCTGAACCCCCAGTATTGAAAATACTGTCATCCCTCAAGCCAGGGTCCACCAGCACTGTCACAGCGCCTACCACAGCAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp TTCCCAAAGAGAGTCTGCAGGATGTGTTCCAGGGGCGAGGCTGTTTaGGAAGTGGCAGCAGTAACAGGGGAAGCTGTGGTAGTGATTGCT +
Preference number: 6 (lower is better)
Translates to: FPKRVCRMCSRGEAV*EVAAVTGEAVVVIA
Trigger: AGCAATCACTACCACAGCTTCCCCTGTTACTGCTGCCACTTCCAAAACAGCCTCGCCCCTGGAACACATCCTGCAGACTCTCTTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp AGCGGATCAGACAGAGCTCCTTGGACACCGATGACTTaGGTTTGCCAACGTAATCCCACACGGTCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SGSDRAPWTPMT*VCQRNPTRSLE
Trigger: CTCCAAAGACCGTGTGGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGATCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp ATCCTACCCTTTATGCCCTGGTCTTCTCCGGACTTCTaGTCTACTGTCCCTATGCTTGTGCAGTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: ILPFMPWSSPDF*STVPMLVQSVP
Trigger: TGGCACAGACTGCACAAGCATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTGGGGCTTGCTGTTCTTGAGAGAACAGCTCTGTCTTaGCCAAAGACGACTTGGGAGGTGGTGACATCAATG +
Preference number: 6 (lower is better)
Translates to: LGLAVLERTALS*PKTTWEVVTSM
Trigger: CATTGATGTCACCACCTCCCAAGTCGTCTTTGGGCAAGACAGAGCTGTTCTCTCAAGAACAGCAAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GGGTTTGCTGCCTTCTCAATCCTACCCTTTATGCCCTaGTCTTCTCCGGACTTCTGCTCTACTGTCCCTATG +
Preference number: 6 (lower is better)
Translates to: GFAAFSILPFMP*SSPDFCSTVPM
Trigger: CATAGGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CCA 72 bp TTCAAGACCTGGGCCCTCAAAGGGCAAGAGTTTGGATaGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTA +
Preference number: 6 (lower is better)
Translates to: FKTWALKGQEFG*HRVLSTQWNQV
Trigger: TACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTGCCCTTTGAGGGCCCAGGTCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CAGCCTTTGGGTGATACGTACATTTACTCAATAGGGTaGGCGAGAGTGCAGTGGGCTTCTCTGGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: QPLGDTYIYSIG*ARVQWASLASL
Trigger: CAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATGTACGTATCACCCAAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CAA 72 bp TGCACCCAGAGTCCTGCTCATCGGTGGCGCTACCGTTaGTCTCATCCTGCACTTGCAAAATGGTGCAATTTG +
Preference number: 6 (lower is better)
Translates to: CTQSPAHRWRYR*SHPALAKWCNL
Trigger: CAAATTGCACCATTTTGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCTGGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp TTGGGCACCACTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAGTTGTCCAGATGGGCTGCCATGGAG +
Preference number: 6 (lower is better)
Translates to: LGTTAEVNAGFIMSS*VSEAWELSRWAAME
Trigger: CTCCATGGCAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAGTGGTGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp AGGTATCTCGGGTCAGGAGAGGAGGATGGCTTAGCCAGTATGGACTaGGGCACCACTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGT +
Preference number: 6 (lower is better)
Translates to: RYLGSGEEDGLASMD*GTTAEVNAGFIMSS
Trigger: ACTGGACATGATAAAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGACCCGAGATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp GATGGCACAGGGTCCTTAGCACTCAGTGGAATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTAGCTACAACCCCAAAGCGACCACGG +
Preference number: 6 (lower is better)
Translates to: DGTGSLALSGIRYRS*TCLLLLATTPKRPR
Trigger: CCGTGGTCGCTTTGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 90 bp AGAGTCCTGCTCATCGGTGGCGCTACCGTTTGTCTCATCCTGCACTaGCAAAATGGTGCAATTTGGGCAGATGTAGTCTTCCCCGTTCCT +
Preference number: 6 (lower is better)
Translates to: RVLLIGGATVCLILH*QNGAIWADVVFPVP
Trigger: AGGAACGGGGAAGACTACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGGATGAGACAAACGGTAGCGCCACCGATGAGCAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp GGCGTGGTGCTGGTAGCAGCTGTGTCTATAGAGTGTACACTGTACTaGGGAGGCTTCTTCTCGGATGGCAAAGCTGCAGTTACTTTGGGA +
Preference number: 6 (lower is better)
Translates to: GVVLVAAVSIECTLY*GGFFSDGKAAVTLG
Trigger: TCCCAAAGTAACTGCAGCTTTGCCATCCGAGAAGAAGCCTCCCAAGTACAGTGTACACTCTATAGACACAGCTGCTACCAGCACCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp GTTCTTTCCCTAAGGAGTCAGATACAGGGCCACTTCTaGTCTCAGAACTGCTTTCAACGCTCCCCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: VLSLRSQIQGHF*SQNCFQRSPRK
Trigger: CTTCCGAGGGGAGCGTTGAAAGCAGTTCTGAGATCAGAAGTGGCCCTGTATCTGACTCCTTAGGGAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 72 bp CTTCCCTTCCAACTGATTTTCTATGTCATCTGTCTCTaGCTGGGACACTGGTCCCTGACTAGCCTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LPFQLIFYVICL*LGHWSLTSLRL
Trigger: GAGCCTGAGGCTAGTCAGGGACCAGTGTCCCAGTCAGAGACAGATGACATAGAAAATCAGTTGGAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS TCA 72 bp CAGCTCTGTCTTGCCCAAAGACGACTTGGGAGGTGGTaGCATCAATGCATCGGACACAGAAAAGTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: QLCLAQRRLGRW*HQCIGHRKVCH
Trigger: ATGGCACACTTTTCTGTGTCCGATGCATTGATGTCACCACCTCCCAAGTCGTCTTTGGGCAAGACAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp GGCTTCAGGCTCGTCCAGAGGCTTTTCTTTAGATCCTaGTTCAAATCGCTCCCTCTGTCTCCCTTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: GFRLVQRLFFRS*FKSLPLSPFKS
Trigger: GCTTTTGAAGGGAGACAGAGGGAGCGATTTGAAGCAGGATCTAAAGAAAAGCCTCTGGACGAGCCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CTATCGCCTGGAGACTCAGGGAAACACTTTCTCTCCTaGTTAAGACTAGATGTACTCTCCGGGTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LSPGDSGKHFLS*LRLDVLSGSGS
Trigger: TGAGCCAGACCCGGAGAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp TCATGGATTTACTCAATAGGGTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTGGCTTCACAGCATTGT +
Preference number: 6 (lower is better)
Translates to: SWIYSIGWARVQ*ASLASLASQHC
Trigger: ACAATGCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp ACGTACATTTACTCAATAGGGTGGGCGAGAGTGCAGTaGGCTTCTCTGGCTTCTCTGGCTTCACAGCATTGT +
Preference number: 6 (lower is better)
Translates to: TYIYSIGWARVQ*ASLASLASQHC
Trigger: ACAATGCTGTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATGTACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103055.8
ENSMUST00000130986.8
CDS CAA 72 bp AAACCCCAGGTTTTCCTGAACTCCTTACTGGTGGGTTaGATAGCCTTGGGTGCTTCCTCATTGCTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: KPQVFLNSLLVG*IALGASSLLRC
Trigger: GCACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAACCCACCAGTAAGGAGTTCAGGAAAACCTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp CCTCCAGAGCCTTGTCTTTTGAGAACTGACCAAACTGTTGAACAATaGGATCCAACAAAGGAGCTGCTGACATGGTGTCCTCCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: PPEPCLLRTDQTVEQ*DPTKELLTWCPPPW
Trigger: CCAAGGGGGAGGACACCATGTCAGCAGCTCCTTTGTTGGATCCAATTGTTCAACAGTTTGGTCAGTTCTCAAAAGACAAGGCTCTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp GCTGACATGGTGTCCTCCCCCTTGGCCTTGGAATCCTaGTGTGGAGATAGAGTAGACCCAACAGATTCTTTT +
Preference number: 6 (lower is better)
Translates to: ADMVSSPLALES*CGDRVDPTDSF
Trigger: AAAAGAATCTGTTGGGTCTACTCTATCTCCACATCAGGATTCCAAGGCCAAGGGGGAGGACACCATGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp CGTGTCTGCAATCCCTTCATCAGCAGTGTTAGGAACTaGATTAGGTGGAGAGCTGTCATGCCTGGGCTTAAA +
Preference number: 6 (lower is better)
Translates to: RVCNPFISSVRN*IRWRAVMPGLK
Trigger: TTTAAGCCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCTAACACTGCTGATGAAGGGATTGCAGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp GGAGGATGGCTTAGCCAGTATGGACTTGGGCACCACTaGAGAAGTCAATGCAGGCTTTATCATGTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: GGWLSQYGLGHH*RSQCRLYHVQF
Trigger: AAACTGGACATGATAAAGCCTGCATTGACTTCTGCAGTGGTGCCCAAGTCCATACTGGCTAAGCCATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp CCTGAACTCCTTACTGGTGGGTTTGATAGCCTTGGGTaGTTCCTCATTGCTCAGGTGCCCTTTATCATCCAT +
Preference number: 6 (lower is better)
Translates to: PELLTGGFDSLG*FLIAQVPFIIH
Trigger: ATGGATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAACCCACCAGTAAGGAGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTGGTGTCCAGGGGTAATGAGACAGGGTTACCAGGGTaGTCACATTTTTGGATGTCATGTTCAGGTCTCAAC +
Preference number: 6 (lower is better)
Translates to: LVSRGNETGLPG*SHFWMSCSGLN
Trigger: GTTGAGACCTGAACATGACATCCAAAAATGTGAGCACCCTGGTAACCCTGTCTCATTACCCCTGGACACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp CTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGTTTaGTTTCTGAAGCCTGGGAGTTGTCCAGATGGGCTG +
Preference number: 6 (lower is better)
Translates to: LQKSMQALSCPV*FLKPGSCPDGL
Trigger: CAGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp CAAGAGTTTGGATGGCACAGGGTCCTTAGCACTCAGTaGAATCAGGTACAGGTCCTTGACATGCCTGTTGTT +
Preference number: 6 (lower is better)
Translates to: QEFGWHRVLSTQ*NQVQVLDMPVV
Trigger: AACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATCCAAACTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp GCAAGTCATCAATGGTCACTTTGGCTTCTTCTAAGATaGTCTCATCTTCTGGGTCATAGGCCACCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ASHQWSLWLLLR*SHLLGHRPPPP
Trigger: GGGAGGAGGTGGCCTATGACCCAGAAGATGAGACCATCTTAGAAGAAGCCAAAGTGACCATTGATGACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp CTGGTAGCAGCTGTGTCTATAGAGTGTACACTGTACTaGGGAGGCTTCTTCTCGGATGGCAAAGCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: LVAAVSIECTLY*GGFFSDGKAAV
Trigger: AACTGCAGCTTTGCCATCCGAGAAGAAGCCTCCCAAGTACAGTGTACACTCTATAGACACAGCTGCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp TCTTGGTCCATCACTATTAGGAACAAGGTTCTCTTCTaGATAAGGAGGGACTGGCCCCCTAGGTCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: SWSITIRNKVLF*IRRDWPPRSWK
Trigger: TTTCCAGGACCTAGGGGGCCAGTCCCTCCTTATTCAGAAGAGAACCTTGTTCCTAATAGTGATGGACCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp AATGCAGTCATTACTGCAATACACAGAGTCAGGCTGTaGTACACTGGAACACCCAGGGCCAATGCATTTAGG +
Preference number: 6 (lower is better)
Translates to: NAVITAIHRVRL*YTGTPRANAFR
Trigger: CCTAAATGCATTGGCCCTGGGTGTTCCAGTGTAGCACAGCCTGACTCTGTGTATTGCAGTAATGACTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS GCA 72 bp CTCTGCTGTCGGAGAGCTTCTTCTTGCTCCTCCAGCTaGCTCTTTTGCTCCTCAATCTGTTTATTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: LCCRRASSCSSS*LFCSSICLFSS
Trigger: AGAGCTAAATAAACAGATTGAGGAGCAAAAGAGGCAGCTGGAGGAGCAAGAAGAAGCTCTCCGACAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp ACTGCAGAAGTCAATGCAGGCTTTATCATGTCCAGTTaGGTTTCTGAAGCCTGGGAGTTGTCCAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: TAEVNAGFIMSS*VSEAWELSRWA
Trigger: AGCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp GGGTCCTTAGCACTCAGTGGAATCAGGTACAGGTCCTaGACATGCCTGTTGTTATTAGCTACAACCCCAAAG +
Preference number: 6 (lower is better)
Translates to: GSLALSGIRYRS*TCLLLLATTPK
Trigger: CTTTGGGGTTGTAGCTAATAACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp GTTTTCCTGAACTCCTTACTGGTGGGTTTGATAGCCTaGGGTGCTTCCTCATTGCTCAGGTGCCCTTTATCA +
Preference number: 6 (lower is better)
Translates to: VFLNSLLVGLIA*GASSLLRCPLS
Trigger: TGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAACCCACCAGTAAGGAGTTCAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 90 bp AAGTCGGCAGGCCTTTCTGTGGCGCTAACTTTCATACACATGCGATaGGGCAAGTCATCAATGGTCACTTTGGCTTCTTCTAAGATGGTC +
Preference number: 6 (lower is better)
Translates to: KSAGLSVALTFIHMR*GKSSMVTLASSKMV
Trigger: GACCATCTTAGAAGAAGCCAAAGTGACCATTGATGACTTGCCCAATCGCATGTGTATGAAAGTTAGCGCCACAGAAAGGCCTGCCGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS GCA 72 bp GCAGTGTTAGGAACTGCATTAGGTGGAGAGCTGTCATaGCTGGGCTTAAAGTCTTCCTTCTTAGAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: AVLGTALGGELS*LGLKSSFLEEA
Trigger: AGCTTCTTCTAAGAAGGAAGACTTTAAGCCCAGGCATGACAGCTCTCCACCTAATGCAGTTCCTAACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp GGCCTTTCTGTGGCGCTAACTTTCATACACATGCGATaGGGCAAGTCATCAATGGTCACTTTGGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GLSVALTFIHMR*GKSSMVTLASS
Trigger: AGAAGAAGCCAAAGTGACCATTGATGACTTGCCCAATCGCATGTGTATGAAAGTTAGCGCCACAGAAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp ATTTTACAGTTTAAATCAAAAAGATGGGCACGGTGCTaGCTTGTGGTGTCCTTCAGCATGCTGCTGAAGACG +
Preference number: 6 (lower is better)
Translates to: ILQFKSKRWARC*LVVSFSMLLKT
Trigger: CGTCTTCAGCAGCATGCTGAAGGACACCACAAGCCAGCACCGTGCCCATCTTTTTGATTTAAACTGTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CCA 72 bp GAGGCTTCTTCTCGGATGGCAAAGCTGCAGTTACTTTaGGATAGACTGAAGTTTCTAGTTCTTCCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: EASSRMAKLQLL*DRLKFLVLPVG
Trigger: TCCAACAGGAAGAACTAGAAACTTCAGTCTATCCCAAAGTAACTGCAGCTTTGCCATCCGAGAAGAAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp GGTAATGAGACAGGGTTACCAGGGTGCTCACATTTTTaGATGTCATGTTCAGGTCTCAACACAGCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: GNETGLPGCSHF*MSCSGLNTAFS
Trigger: TGAAAACGCTGTGTTGAGACCTGAACATGACATCCAAAAATGTGAGCACCCTGGTAACCCTGTCTCATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp GGAGTCGAGTCCGCTTCTCATCTGTCTTGTCTAACTCGCCAGCACTaGAAGGACGTTTCACTTTCTGACATATTACTAACCCAAGTATTA +
Preference number: 6 (lower is better)
Translates to: GVESASHLSCLTRQH*KDVSLSDILLTQVL
Trigger: TAATACTTGGGTTAGTAATATGTCAGAAAGTGAAACGTCCTTCAAGTGCTGGCGAGTTAGACAAGACAGATGAGAAGCGGACTCGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CCA 72 bp TACACATGCGATTGGGCAAGTCATCAATGGTCACTTTaGCTTCTTCTAAGATGGTCTCATCTTCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: YTCDWASHQWSL*LLLRWSHLLGH
Trigger: ATGACCCAGAAGATGAGACCATCTTAGAAGAAGCCAAAGTGACCATTGATGACTTGCCCAATCGCATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp TCCGCTTCTCATCTGTCTTGTCTAACTCGCCAGCACTaGAAGGACGTTTCACTTTCTGACATATTACTAACC +
Preference number: 6 (lower is better)
Translates to: SASHLSCLTRQH*KDVSLSDILLT
Trigger: GGTTAGTAATATGTCAGAAAGTGAAACGTCCTTCAAGTGCTGGCGAGTTAGACAAGACAGATGAGAAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 90 bp TGTTCTTTACCTGAACTTAGAAATCTCATGGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTGCAATACACAGAGTCAGGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: CSLPELRNLMVAAAC*RMQSLLQYTESGCA
Trigger: AGCACAGCCTGACTCTGTGTATTGCAGTAATGACTGCATTCTCAAACACGCAGCAGCTACCATGAGATTTCTAAGTTCAGGTAAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 72 bp CCTGAACTTAGAAATCTCATGGTAGCTGCTGCGTGTTaGAGAATGCAGTCATTACTGCAATACACAGAGTCA +
Preference number: 6 (lower is better)
Translates to: PELRNLMVAAAC*RMQSLLQYTES
Trigger: TGACTCTGTGTATTGCAGTAATGACTGCATTCTCAAACACGCAGCAGCTACCATGAGATTTCTAAGTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087517.10
ENSMUST00000103055.8
ENSMUST00000103056.10
ENSMUST00000103057.8
ENSMUST00000130986.8
CDS CAA 72 bp TCACTTTCTGACATATTACTAACCCAAGTATTATATTaGGACGTGGTGATTCAAGACCTGGGCCCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SLSDILLTQVLY*DVVIQDLGPQR
Trigger: CCTTTGAGGGCCCAGGTCTTGAATCACCACGTCCAAATATAATACTTGGGTTAGTAATATGTCAGAAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS TCA 72 bp TTCTTAGGAGCTGGTTCATCCTCCGAGGATGGAACCTaGCCTGTACAGATTTTACAGTTTAAATCAAAAAGA +
Preference number: 6 (lower is better)
Translates to: FLGAGSSSEDGT*PVQILQFKSKR
Trigger: TCTTTTTGATTTAAACTGTAAAATCTGTACAGGTCAGGTTCCATCCTCGGAGGATGAACCAGCTCCTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp AGATACAAGTTCTTCAGGCTTCATTCTGACAAGTTTTaGCAAGGAGATTTCTTCTCGAAGAACACGATGGAA +
Preference number: 6 (lower is better)
Translates to: RYKFFRLHSDKF*QGDFFSKNTME
Trigger: TTCCATCGTGTTCTTCGAGAAGAAATCTCCTTGGCAAAACTTGTCAGAATGAAGCCTGAAGAACTTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS GCA 72 bp CTCACTGAGATAATCCAAACACCCAGAGACAGGATATaGCTTAGTGACAAATTTTGCTACACTCTGCATATT +
Preference number: 6 (lower is better)
Translates to: LTEIIQTPRDRI*LSDKFCYTLHI
Trigger: AATATGCAGAGTGTAGCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGGTGTTTGGATTATCTCAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS TCA 72 bp TCTAACTCGCCAGCACTTGAAGGACGTTTCACTTTCTaGCATATTACTAACCCAAGTATTATATTTGGACGT +
Preference number: 6 (lower is better)
Translates to: SNSPALEGRFTF*HITNPSIIFGR
Trigger: ACGTCCAAATATAATACTTGGGTTAGTAATATGTCAGAAAGTGAAACGTCCTTCAAGTGCTGGCGAGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087517.10
CDS CAA 72 bp ATGTCAGGAATGGTTTCTGGTTTAGTAGTGTTCTTCTaGCTTTCATTAAGCAACTTAGTCCTGGATTCTATC +
Preference number: 6 (lower is better)
Translates to: MSGMVSGLVVFF*LSLSNLVLDSI
Trigger: GATAGAATCCAGGACTAAGTTGCTTAATGAAAGCAAGAAGAACACTACTAAACCAGAAACCATTCCTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8
CDS CAA 72 bp ACACTCTGCATATTAATAAATCCTTTCCAAATCGTGTaGAGTCGAGACAAAAAGAGGGTTGTATCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: TLCILINPFQIV*SRDKKRVVSPS
Trigger: AGAAGGAGATACAACCCTCTTTTTGTCTCGACTCAACACGATTTGGAAAGGATTTATTAATATGCAGAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037764.12
ENSMUST00000087517.10
ENSMUST00000103056.10
ENSMUST00000103057.8