RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIAPH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034480

Ensembl transcript IDs: ENSMUST00000037854.15, ENSMUST00000113320.3, ENSMUST00000167619.9

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTAATTTCTGCCACATGGAAGAATCCATTAGCTTTCACTTGAGATaGGTTCTAAATACCTTGAGTTGGGCTTCTCTTTCTGAGTGTGAT +
Preference number: 1 (lower is better)
Translates to: VNFCHMEESISFHLR*VLNTLSWASLSECD
Trigger: ATCACACTCAGAAAGAGAAGCCCAACTCAAGGTATTTAGAACCCATCTCAAGTGAAAGCTAATGGATTCTTCCATGTGGCAGAAATTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 90 bp CATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAATaGCAGCACAAATTGACAGCTTTACTGCTACTGGAACTATTTATT +
Preference number: 1 (lower is better)
Translates to: HYWSSANTGVYSEVK*QHKLTALLLLELFI
Trigger: AATAAATAGTTCCAGTAGCAGTAAAGCTGTCAATTTGTGCTGTCATTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR GCA 90 bp ATTTCTGGTGAGGGCACAAGAGGAAATGAATACTGTAGTGGGAACTaGAAGAAAGATTGTTGTTATATAGCAGCAAAACCAAACCAAACA +
Preference number: 1 (lower is better)
Translates to: ISGEGTRGNEYCSGN*KKDCCYIAAKPNQT
Trigger: TGTTTGGTTTGGTTTTGCTGCTATATAACAACAATCTTTCTTGCAGTTCCCACTACAGTATTCATTTCCTCTTGTGCCCTCACCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 90 bp ATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTaGGTTCAGATTAGTGTACTTGCAGTAACTACCAATACACTTCCC +
Preference number: 1 (lower is better)
Translates to: MCIFREEQMFPNHDI*VQISVLAVTTNTLP
Trigger: GGGAAGTGTATTGGTAGTTACTGCAAGTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 90 bp TTATATATACAGAGGGGAAGCTGTCAAAACAACAGAGTAGTAAGATaGAGCCACAATCCAAGGAATAATGACAATCACATGAGAAGATGC +
Preference number: 1 (lower is better)
Translates to: LYIQRGSCQNNRVVR*SHNPRNNDNHMRRC
Trigger: GCATCTTCTCATGTGATTGTCATTATTCCTTGGATTGTGGCTTCATCTTACTACTCTGTTGTTTTGACAGCTTCCCCTCTGTATATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR GCA 90 bp AGACAAGTTAAGTATAACTTCTGCTCTCTCACATATTTAAAACAATaGCGAGCTTCTTTACCTGTTAGCGTTGTTTTGGCAGTATCACTG +
Preference number: 1 (lower is better)
Translates to: RQVKYNFCSLTYLKQ*RASLPVSVVLAVSL
Trigger: CAGTGATACTGCCAAAACAACGCTAACAGGTAAAGAAGCTCGGCATTGTTTTAAATATGTGAGAGAGCAGAAGTTATACTTAACTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 90 bp ACTGCTATGACAAATACCTACAGATGTGAAAGTGGCTTTGGAATTTaGTGCTGGGTAGAGGATGGTACAATTGTTGATAGTAAACTTAAT +
Preference number: 1 (lower is better)
Translates to: TAMTNTYRCESGFGI*CWVEDGTIVDSKLN
Trigger: ATTAAGTTTACTATCAACAATTGTACCATCCTCTACCCAGCATCAAATTCCAAAGCCACTTTCACATCTGTAGGTATTTGTCATAGCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 90 bp CAGGACCATGGGACAATAAATTGTTGTGGTCTTAAACTACAAGATTaGTGGTCAATCATTACAGTAGCCAAAGGAAAATATTCTAAACAG +
Preference number: 1 (lower is better)
Translates to: QDHGTINCCGLKLQD*WSIITVAKGKYSKQ
Trigger: CTGTTTAGAATATTTTCCTTTGGCTACTGTAATGATTGACCATCAATCTTGTAGTTTAAGACCACAACAATTTATTGTCCCATGGTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CAA 90 bp GCTGGGATTAAAGGCGTGCACCAAAAGGATGCGGCCTGCCAGCTTTaGAATAGTGGTGAAAAGATCAGGCACACATTTCTGGATTCATTC +
Preference number: 2 (lower is better)
Translates to: AGIKGVHQKDAACQL*NSGEKIRHTFLDSF
Trigger: GAATGAATCCAGAAATGTGTGCCTGATCTTTTCACCACTATTCAAAAGCTGGCAGGCCGCATCCTTTTGGTGCACGCCTTTAATCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAACCCTTTGTCTCTTTGTaGGGTATGGGGTGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKPFVSL*GMGWVG
Trigger: ACCTACCCACCCCATACCCCACAAAGAGACAAAGGG...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR GCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGCCCTCTACACTCTTCTaGAGTTCTGTTCCCTACCTC +
Preference number: 2 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQPSTLF*SSVPYL
Trigger: GAGGTAGGGAACAGAACTGCAGAAGAGTGTAGAGGG...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGAATTATTTGACAGACTaGAATGTTGGTAGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQNYLTD*NVGRSL
Trigger: AAGGCTTCTACCAACATTCCAGTCTGTCAAATAATT...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAAAGCTTTCACTTGAGATaGGTTCTAAATACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQSFHLR*VLNTLS
Trigger: ACTCAAGGTATTTAGAACCCATCTCAAGTGAAAGCT...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CAA 90 bp GTACTTGCAGTAACTACCAATACACTTCCCTTCCCCCAGATCAGCTaGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGT +
Preference number: 2 (lower is better)
Translates to: VLAVTTNTLPFPQIS*TFVEMHFFPLQLLS
Trigger: ACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGTAGTTACTGCAAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGTCCCCCAGATCAGCTTaGCCTTTGTGGAAATGCATT +
Preference number: 2 (lower is better)
Translates to: LHNQVLTHNDKLCASLERSPRSA*PLWKCI
Trigger: AATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGA...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAAGTGGCTTTGGAATTTaGTGCTGGGTAGAGGATGGT +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKSGFGI*CWVEDG
Trigger: ACCATCCTCTACCCAGCATCAAATTCCAAAGCCACT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATTAATTTCTGCCACATaGAAGAATCCATTAGCTTTC +
Preference number: 2 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQLISAT*KNPLAF
Trigger: GAAAGCTAATGGATTCTTCCATGTGGCAGAAATTAA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAGACATGCCAGTGAAATaGGATATACTAGGGGGACCA +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKDMPVK*DILGGP
Trigger: TGGTCCCCCTAGTATATCCCATTTCACTGGCATGTC...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGGGGGTGAAGGGAGAATaGAGTAATGGAAGAAGTAGA +
Preference number: 2 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQGVKGE*SNGRSR
Trigger: TCTACTTCTTCCATTACTTCATTCTCCCTTCACCCC...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR GCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCTGTCTATCTCTCCCCTaGCCTTTGTCTCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFCLSLP*PLSLCG
Trigger: CCCACAAAGAGACAAAGGGCAGGGGAGAGATAGACA...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATACCCTTTGTCTCTTTGTaGGGTATGGGGTGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIPFVSL*GMGWVG
Trigger: ACCTACCCACCCCATACCCCACAAAGAGACAAAGGG...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAGAAGTCTTAGGAGAATaGGGAGGAGAAGAGACGATA +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKEVLGE*GGEETI
Trigger: TATCGTCTCTTCTCCTCCCCATTCTCCTAAGACTTC...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTCCCCCAGATCAGCTTaGCCTTTGTGGAAATGCATT +
Preference number: 2 (lower is better)
Translates to: DKLCASLERNKCFLIMTSSPRSA*PLWKCI
Trigger: AATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAAAATACCTACAGATGTaGAAGTGGCTTTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKKYLQM*KWLWNL
Trigger: CAAATTCCAAAGCCACTTTCACATCTGTAGGTATTT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR GCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAGGTAAGGTTAATTTCTaGCACATGGAAGAATCCATT +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKGKVNF*HMEESI
Trigger: AATGGATTCTTCCATGTGGCAGAAATTAACCTTACC...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGACAGAGAGTTGGGTATaGGTTATTTCAGTAAGAGAT +
Preference number: 2 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQTESWV*VISVRD
Trigger: ATCTCTTACTGAAATAACCCATACCCAACTCTCTGT...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR GCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATAATGGCGGTCTCTAAATaGCACCATCAACATCTTTAC +
Preference number: 2 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIMAVSK*HHQHLY
Trigger: GTAAAGATGTTGATGGTGGCATTTAGAGACCGCCAT...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR GCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAATTCAATACAGTCTTTaGTTTTACCTCTCACTTCAG +
Preference number: 2 (lower is better)
Translates to: NASHYWSSANTGVYSEVKIQYSL*FYLSLQ
Trigger: CTGAAGTGAGAGGTAAAAGCAAAGACTGTATTGAAT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR TCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATATCAGTATTTCAACCTTaGCCAGTTAGAAAATATGGC +
Preference number: 2 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTISVFQP*PVRKYG
Trigger: GCCATATTTTCTAACTGGTCAAGGTTGAAATACTGA...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCAATTATTTGACAGACTaGAATGTTGGTAGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFNYLTD*NVGRSL
Trigger: AAGGCTTCTACCAACATTCCAGTCTGTCAAATAATT...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAACCTGTTAGCGTTGTTTaGGCAGTATCACTGAAATGC +
Preference number: 3 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQPVSVV*AVSLKC
Trigger: GCATTTCAGTGATACTGCCAAAACAACGCTAACAGG...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAAGGACACTTGTTTACTTaGTCTCAGAAGGTGGCTTGT +
Preference number: 3 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQGHLFT*SQKVAC
Trigger: ACAAGCCACCTTCTGAGACAAAGTAAACAAGTGTCC...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATGGACACTTGTTTACTTaGTCTCAGAAGGTGGCTTGT +
Preference number: 3 (lower is better)
Translates to: TINIFTGQAERDQVHREDGHLFT*SQKVAC
Trigger: ACAAGCCACCTTCTGAGACAAAGTAAACAAGTGTCC...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAACAAAGTTGAGGAACTaGGCAGGCCCTGTTGTAGGT +
Preference number: 3 (lower is better)
Translates to: NASHYWSSANTGVYSEVKTKLRN*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAGTTCCTCAACTTTGT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 72 bp ACTCTTCTGCAGTTCTGTTCCCTACCTCTAAGGGGGTaGAGGGAGAATGAAGTAATGGAAGAAGTAGAAATC +
Preference number: 3 (lower is better)
Translates to: TLLQFCSLPLRG*RENEVMEEVEI
Trigger: GATTTCTACTTCTTCCATTACTTCATTCTCCCTTCACCCCCTTAGAGGTAGGGAACAGAACTGCAGAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAGTCTCAGAAGGTGGCTaGTCAAGCCAGTTATTTGTT +
Preference number: 3 (lower is better)
Translates to: NASHYWSSANTGVYSEVKVSEGG*SSQLFV
Trigger: AACAAATAACTGGCTTGACAAGCCACCTTCTGAGAC...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR GCA 72 bp GAGGGCACAAGAGGAAATGAATACTGTAGTGGGAACTaGAAGAAAGATTGTTGTTATATAGCAGCAAAACCA +
Preference number: 3 (lower is better)
Translates to: EGTRGNEYCSGN*KKDCCYIAAKP
Trigger: TGGTTTTGCTGCTATATAACAACAATCTTTCTTGCAGTTCCCACTACAGTATTCATTTCCTCTTGTGCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR TCA 72 bp ACAAATACCTACAGATGTGAAAGTGGCTTTGGAATTTaGTGCTGGGTAGAGGATGGTACAATTGTTGATAGT +
Preference number: 3 (lower is better)
Translates to: TNTYRCESGFGI*CWVEDGTIVDS
Trigger: ACTATCAACAATTGTACCATCCTCTACCCAGCATCAAATTCCAAAGCCACTTTCACATCTGTAGGTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CCA 72 bp ATTAATAGGCATTATACAGAGAATGCAAGTCATTATTaGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTG +
Preference number: 3 (lower is better)
Translates to: INRHYTENASHY*SSANTGVYSEV
Trigger: CACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATTCTCTGTATAATGCCTATTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR-3UTR CAA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCCTGCATGAATTAGTCTaGAAATTACACTCCAGAGAA +
Preference number: 3 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFLHELV*KLHSRE
Trigger: TTCTCTGGAGTGTAATTTCAAGACTAATTCATGCAG...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATCGTCTCCTCTTCGTTaGCGGCCCGGTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQSSPLR*RPGSPR
Trigger: GCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGCCGGTACTTGAAGTCTaGGTCCATGCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQPVLEV*VHATAV
Trigger: CACTGCAGTGGCATGGACCCAGACTTCAAGTACCGG...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATAGGAGGTGGTGGTGGTaGGCATGGTCCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TINIFTGQAERDQVHREDRRWWW*AWSCTW
Trigger: CCAGGTGCAGGACCATGCCCACCACCACCACCTCCT...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCTCCCCCAGGGGGTGGTaGTGGAGGAGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFSPRGW*WRRYSR
Trigger: TCTGGAGTACCTCCTCCACCACCACCCCCTGGGGGA...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATTCCCCCAGGGGGTGGTaGTGGAGGAGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TINIFTGQAERDQVHREDSPRGW*WRRYSR
Trigger: TCTGGAGTACCTCCTCCACCACCACCCCCTGGGGGA...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAACTGGGTCCATGCCACTaGAGTGTAGCACTATCTGTG +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQLGPCH*SVALSV
Trigger: CACAGATAGTGCTACACTGCAGTGGCATGGACCCAG...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCAGGTGGTGGAGGTGGTaGTGGAATACCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFRWWRW*WNTRHP
Trigger: GGGATGCCTGGTATTCCACCACCACCTCCACCACCT...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATAGGTGGTGGAGGTGGTaGTGGAATACCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TINIFTGQAERDQVHREDRWWRW*WNTRHP
Trigger: GGGATGCCTGGTATTCCACCACCACCTCCACCACCT...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGGCCTCTGTATTCCTTTaGCCTTTCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQASVFL*PFIWEG
Trigger: TCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGC...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAACCTGCGCTTTCCACATaGTCCAGCTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQPALST*SSSSGN
Trigger: ATTTCCTGATGAGCTGGAGCATGTGGAAAGCGCAGG...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAAGCCTCTGTATTCCTTTaGCCTTTCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQASVFL*PFIWEG
Trigger: TCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGC...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCAGGTGGACCTGGAATTaGAGATGGAACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFRWTWN*RWNSLS
Trigger: GGACAGGGAGTTCCATCTGCAATTCCAGGTCCACCT...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTTCGTCTCCTCTTCGTTaGCGGCCCGGTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFSSPLR*RPGSPR
Trigger: GCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGA...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCTGGTGGAGGTGGACCTaGAATTGCAGATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFWWRWT*NCRWNS
Trigger: GGAGTTCCATCTGCAATTCCAGGTCCACCTCCACCA...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCGCATGGTCCTGCACCTaGCAGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFAWSCT*QWRWWR
Trigger: CCTCCACCACCTCCACTGCCAGGTGCAGGACCATGC...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCCAAAGGTGGTGGAGGTaGTGGTGGAATACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFQRWWR*WWNTRH
Trigger: ATGCCTGGTATTCCACCACCACCTCCACCACCTTTG...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CAA 72 bp AAAGGCGTGCACCAAAAGGATGCGGCCTGCCAGCTTTaGAATAGTGGTGAAAAGATCAGGCACACATTTCTG +
Preference number: 4 (lower is better)
Translates to: KGVHQKDAACQL*NSGEKIRHTFL
Trigger: CAGAAATGTGTGCCTGATCTTTTCACCACTATTCAAAAGCTGGCAGGCCGCATCCTTTTGGTGCACGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCGCATGGTCCTGCACCTaGCAGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFAWSCT*QWRWWR
Trigger: CCTCCACCACCTCCACTGCCAGGTGCAGGACCATGC...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATTACTCCAGACAAAGGTaGTGGAGGTGGTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TINIFTGQAERDQVHREDYSRQR*WRWWWN
Trigger: ATTCCACCACCACCTCCACCACCTTTGTCTGGAGTA...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCGCCTCTGTATTCCTTTaGCCTTTCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFASVFL*PFIWEG
Trigger: TCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGC...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGAATGCTTTGTTCCATTaGTACAAGGTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQNALFH*YKVALE
Trigger: CTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATT...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGCATGGTCCTGCACCTaGCAGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLAWSCT*QWRWWR
Trigger: CCTCCACCACCTCCACTGCCAGGTGCAGGACCATGC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACAGGAGGTGGTGGTGGTaGGCATGGTCCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYRRWWW*AWSCTW
Trigger: CCAGGTGCAGGACCATGCCCACCACCACCACCTCCT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGAGGAGGTGGTGGTGGTaGGCATGGTCCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSERRWWW*AWSCTW
Trigger: CCAGGTGCAGGACCATGCCCACCACCACCACCTCCT...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTCCCCCAGGGGGTGGTaGTGGAGGAGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSESPRGW*WRRYSR
Trigger: TCTGGAGTACCTCCTCCACCACCACCCCCTGGGGGA...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCTGTCCTCGAAGCTGCTaGATTTCTGTTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFCPRSC*ISVSSS
Trigger: AGAACTGGAAACAGAAATCCAGCAGCTTCGAGGACA...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAATGGTGGAGGTGGACCTaGAATTGCAGATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKWWRWT*NCRWNS
Trigger: GGAGTTCCATCTGCAATTCCAGGTCCACCTCCACCA...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTAGGAGGGACGACTCCTaGAAGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSRRDDS*KWRWWR
Trigger: CCTCCACCACCTCCACTTCCAGGAGTCGTCCCTCCT...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAAGGAGGGACGACTCCTaGAAGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLRRDDS*KWRWWR
Trigger: CCTCCACCACCTCCACTTCCAGGAGTCGTCCCTCCT...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTGGTGGAGGTGGTGGTaGAATACCAGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYWWRWW*NTRHPR
Trigger: CCTGGGATGCCTGGTATTCCACCACCACCTCCACCA...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGCAAAGGTGGTGGAGGTaGTGGTGGAATACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERQRWWR*WWNTRH
Trigger: ATGCCTGGTATTCCACCACCACCTCCACCACCTTTG...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAAGTGCGATTCTGCTGGTaGGAAATTCTTGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQVRFCW*EILDVF
Trigger: AAAAACATCAAGAATTTCCCACCAGCAGAATCGCAC...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCGGGCCGTCTGTTATCTaGATTTCTTGGAATTCGCTT +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFGPSVI*ISWNSL
Trigger: AAGCGAATTCCAAGAAATCCAGATAACAGACGGCCC...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGGTTCAGCTGCAGCAGTaGTGCCCCCTAAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERVQLQQ*CPLKVC
Trigger: ACAAACTTTTAGGGGGCATCACTGCTGCAGCTGAAC...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGGTTCAGCTGCAGCAGTaGTGCCCCCTAAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQVQLQQ*CPLKVC
Trigger: ACAAACTTTTAGGGGGCATCACTGCTGCAGCTGAAC...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCAGGTGGACCTGGAATTaGAGATGGAACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFRWTWN*RWNSLS
Trigger: GGACAGGGAGTTCCATCTGCAATTCCAGGTCCACCT...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGACCCAGCTGACAGGATaGCTGGTTAAAGACACTCTC +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQTQLTG*LVKDTL
Trigger: GAGAGTGTCTTTAACCAGCCATCCTGTCAGCTGGGT...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGGTGGAGGTGGTGGTaGAATACCAGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSWWRWW*NTRHPR
Trigger: CCTGGGATGCCTGGTATTCCACCACCACCTCCACCA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTATGGTGGAGGTGGTGGTaGAATACCAGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLWWRWW*NTRHPR
Trigger: CCTGGGATGCCTGGTATTCCACCACCACCTCCACCA...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAAGGTGGTGGAGGTGGTaGTGGAATACCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLRWWRW*WNTRHP
Trigger: GGGATGCCTGGTATTCCACCACCACCTCCACCACCT...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGTACTCCAGACAAAGGTaGTGGAGGTGGTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERYSRQR*WRWWWN
Trigger: ATTCCACCACCACCTCCACCACCTTTGTCTGGAGTA...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATACTGCTATGATGCTTaGTTTGATGTTGTTGACATG +
Preference number: 4 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQYCYDA*FDVVDM
Trigger: CATGTCAACAACATCAAACCAAGCATCATAGCAGTA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGCTTTCTGCGGTCTCTaGATGCTGCACCTGACTGTA +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYAFCGL*MLHLTV
Trigger: TACAGTCAGGTGCAGCATTCAGAGACCGCAGAAAGC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCACCCAGCTGACAGGATaGCTGGTTAAAGACACTCTC +
Preference number: 4 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFTQLTG*LVKDTL
Trigger: GAGAGTGTCTTTAACCAGCCATCCTGTCAGCTGGGT...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTACCGGTACTTGAAGTCTaGGTCCATGCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLPVLEV*VHATAV
Trigger: CACTGCAGTGGCATGGACCCAGACTTCAAGTACCGG...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATACCGGTACTTGAAGTCTaGGTCCATGCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIPVLEV*VHATAV
Trigger: CACTGCAGTGGCATGGACCCAGACTTCAAGTACCGG...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCACCTGGAATTGCAGATaGAACTCCCTGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFTWNCR*NSLSSK
Trigger: CTTCGAGGACAGGGAGTTCCATCTGCAATTCCAGGT...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCTGGTGGAGGTGGACCTaGAATTGCAGATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFWWRWT*NCRWNS
Trigger: GGAGTTCCATCTGCAATTCCAGGTCCACCTCCACCA...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCTGTTCTCTGGCATTCTaGGTAAAGCTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFCSLAF*VKLIIF
Trigger: AAAGATGATGAGCTTTACCCAGAATGCCAGAGAACA...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
CDS-3UTR TCA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATAAACACACTCCTCAATaGTTTTATAATACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TINIFTGQAERDQVHREDKHTPQ*FYNTVA
Trigger: GGCCACAGTATTATAAAATCATTGAGGAGTGTGTTT...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAACTTGAGTATTTGAGCTaGAACTTTGCCTGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKLEYLS*NFACAF
Trigger: GAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAG...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGCTTGAGTATTTGAGCTaGAACTTTGCCTGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQLEYLS*NFACAF
Trigger: GAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAG...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGTTGCTCTTGAGTATTTaGGCTGAAACTTTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERLLLSI*AETLPA
Trigger: CGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAA...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCGCTTTCTGCGGTCTCTaGATGCTGCACCTGACTGTA +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFAFCGL*MLHLTV
Trigger: TACAGTCAGGTGCAGCATTCAGAGACCGCAGAAAGC...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATAGCTTTCTGCGGTCTCTaGATGCTGCACCTGACTGTA +
Preference number: 4 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIAFCGL*MLHLTV
Trigger: TACAGTCAGGTGCAGCATTCAGAGACCGCAGAAAGC...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTACTGGGTCCATGCCACTaGAGTGTAGCACTATCTGTG +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLLGPCH*SVALSV
Trigger: CACAGATAGTGCTACACTGCAGTGGCATGGACCCAG...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTACTGGGTCCATGCCACTaGAGTGTAGCACTATCTGTG +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLLGPCH*SVALSV
Trigger: CACAGATAGTGCTACACTGCAGTGGCATGGACCCAG...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAGGTGGACCTGGAATTaGAGATGGAACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFRWTWN*RWNSLS
Trigger: GGACAGGGAGTTCCATCTGCAATTCCAGGTCCACCT...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATACCTGGAATTGCAGATaGAACTCCCTGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYTWNCR*NSLSSK
Trigger: CTTCGAGGACAGGGAGTTCCATCTGCAATTCCAGGT...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTACAAAGGTGGTGGAGGTaGTGGTGGAATACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLQRWWR*WWNTRH
Trigger: ATGCCTGGTATTCCACCACCACCTCCACCACCTTTG...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAAGATTCCAGGCAGTTaGGAAGTTTCTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERKIPGS*EVSHLR
Trigger: TCTCAGATGAGAAACTTCTCAACTGCCTGGAATCTT...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCGTTCAGCTGCAGCAGTaGTGCCCCCTAAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFVQLQQ*CPLKVC
Trigger: ACAAACTTTTAGGGGGCATCACTGCTGCAGCTGAAC...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGTGTTCGGGTCAAAAATaGAGTATTCTCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERCSGQK*SILPDS
Trigger: AGAGTCTGGGAGAATACTTCATTTTTGACCCGAACA...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAATGGAGAGGTGACAAGTaGATTTATGAACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKWRGDK*IYELHA
Trigger: TGCATGCAGTTCATAAATGCACTTGTCACCTCTCCA...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTACCTGCGCTTTCCACATaGTCCAGCTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLPALST*SSSSGN
Trigger: ATTTCCTGATGAGCTGGAGCATGTGGAAAGCGCAGG...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGCCTGCGCTTTCCACATaGTCCAGCTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEPALST*SSSSGN
Trigger: ATTTCCTGATGAGCTGGAGCATGTGGAAAGCGCAGG...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGACAAACTTATCATGGTaGGATTCTGCTGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERTNLSW*DSAGGK
Trigger: TTTCCCACCAGCAGAATCGCACCATGATAAGTTTGT...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGAGAGCTTCAACATATTaGTGTGCATGGTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQRASTY*CAWWTV
Trigger: AACTGTCCACCATGCACAGCAATATGTTGAAGCTCT...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAACCCAGCTGACAGGATaGCTGGTTAAAGACACTCTC +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLTQLTG*LVKDTL
Trigger: GAGAGTGTCTTTAACCAGCCATCCTGTCAGCTGGGT...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCTGCATGCAGGCCACCTaGAGATGCAAGGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFCMQAT*RCKASL
Trigger: TAATGAAGCCTTGCATCTCCAGGTGGCCTGCATGCA...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGACCTGGAATTGCAGATaGAACTCCCTGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSETWNCR*NSLSSK
Trigger: CTTCGAGGACAGGGAGTTCCATCTGCAATTCCAGGT...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTACTCCAGACAAAGGTaGTGGAGGTGGTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSYSRQR*WRWWWN
Trigger: ATTCCACCACCACCTCCACCACCTTTGTCTGGAGTA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAACTTCACTTTCTTCTTTaGAGGCCCACTCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKLHFLL*RPTPIF
Trigger: GAAAATAGGAGTGGGCCTCCAAAGAAGAAAGTGAAG...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCGATTCTGGGCTGTTTTaGTATCCAAAATTCTCAATT +
Preference number: 4 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFDSGLF*YPKFSI
Trigger: AATTGAGAATTTTGGATACCAAAACAGCCCAGAATC...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCTTGCTCTTGAGTATTTaGGCTGAAACTTTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFLLLSI*AETLPA
Trigger: CGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAA...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGCTACAAGGTTGCTCTTaGGTATTTGAGCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERLQGCS*VFELKL
Trigger: AAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAG...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGCTGGTGGGAAATTCTTaGTGTTTTTCTCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERLVGNS*CFSPDE
Trigger: TTCATCTGGAGAAAAACATCAAGAATTTCCCACCAG...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGCTGGTGGGAAATTCTTaGTGTTTTTCTCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQLVGNS*CFSPDE
Trigger: TTCATCTGGAGAAAAACATCAAGAATTTCCCACCAG...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCAGGCCACCTGGAGATaGAAGGCTTCATTATTTTCT +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFQATWR*KASLFS
Trigger: AGAAAATAATGAAGCCTTGCATCTCCAGGTGGCCTG...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTATCTTTTCTGAAGCTCTaGTTGAGCTTCCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLSFLKL*LSFLTS
Trigger: GCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAAAGA...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTCTTTTCTGAAGCTCTaGTTGAGCTTCCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSSFLKL*LSFLTS
Trigger: GCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAAAGA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTCTTTTCTGAAGCTCTaGTTGAGCTTCCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYSFLKL*LSFLTS
Trigger: GCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAAAGA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCATCACAACACCAAACTaGTCAGGCTCACAGAGATCA +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFITTPN*SGSQRS
Trigger: TGATCTCTGTGAGCCTGAGCAGTTTGGTGTTGTGAT...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGAATGCTTTGTTCCATTaGTACAAGGTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQNALFH*YKVALE
Trigger: CTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATT...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGTTCAACATATTGCTGTaGATGGTGGACAGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERFNILL*MVDSLS
Trigger: TGACAAACTGTCCACCATGCACAGCAATATGTTGAA...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTGTCCTCGAAGCTGCTaGATTTCTGTTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYCPRSC*ISVSSS
Trigger: AGAACTGGAAACAGAAATCCAGCAGCTTCGAGGACA...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTATTAAAACCTAGAGACTaGGCATTCCTGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLLKPRD*AFLEPE
Trigger: CTCAGGCTCCAGGAATGCCCAGTCTCTAGGTTTTAA...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTTAAAACCTAGAGACTaGGCATTCCTGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSLKPRD*AFLEPE
Trigger: CTCAGGCTCCAGGAATGCCCAGTCTCTAGGTTTTAA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATATTAAAACCTAGAGACTaGGCATTCCTGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTILKPRD*AFLEPE
Trigger: CTCAGGCTCCAGGAATGCCCAGTCTCTAGGTTTTAA...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCTGCTTCTTCTTCTTCTaGCGTTCCAGCTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFCFFFF*RSSFSC
Trigger: ACAAGAGAAGCTGGAACGCCAGAAGAAGAAGAAGCA...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGGGCCGTCTGTTATCTaGATTTCTTGGAATTCGCTT +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYGPSVI*ISWNSL
Trigger: AAGCGAATTCCAAGAAATCCAGATAACAGACGGCCC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CAA 72 bp AATTTCTGCCACATGGAAGAATCCATTAGCTTTCACTaGAGATGGGTTCTAAATACCTTGAGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NFCHMEESISFH*RWVLNTLSWAS
Trigger: AGAAGCCCAACTCAAGGTATTTAGAACCCATCTCAAGTGAAAGCTAATGGATTCTTCCATGTGGCAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGGCCTTCCACAATTGGTaGAAATCGTTCTCTATTATT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERAFHNW*KSFSII
Trigger: AATAATAGAGAACGATTTTCACCAATTGTGGAAGGC...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAAAACACACTCCTCAATaGTTTTATAATACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKKHTPQ*FYNTVA
Trigger: GGCCACAGTATTATAAAATCATTGAGGAGTGTGTTT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCACTTCCTGACGAGCTGTaGATTCTTCATCGAACTTCT +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSLPDEL*ILHRTS
Trigger: AGAAGTTCGATGAAGAATTCACAGCTCGTCAGGAAG...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTACTTCCTGACGAGCTGTaGATTCTTCATCGAACTTCT +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLLPDEL*ILHRTS
Trigger: AGAAGTTCGATGAAGAATTCACAGCTCGTCAGGAAG...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTCTTGAGTATTTGAGCTaGAACTTTGCCTGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFLEYLS*NFACAF
Trigger: GAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAG...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTGCTCTTGAGTATTTaGGCTGAAACTTTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSELLLSI*AETLPA
Trigger: CGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAA...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGCAGGCCACCTGGAGATaGAAGGCTTCATTATTTTCT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEQATWR*KASLFS
Trigger: AGAAAATAATGAAGCCTTGCATCTCCAGGTGGCCTG...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACATCACAACACCAAACTaGTCAGGCTCACAGAGATCA +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYITTPN*SGSQRS
Trigger: TGATCTCTGTGAGCCTGAGCAGTTTGGTGTTGTGAT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCACAAACTTATCATGGTaGGATTCTGCTGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFTNLSW*DSAGGK
Trigger: TTTCCCACCAGCAGAATCGCACCATGATAAGTTTGT...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGTAGCAGAAATATACTaGACAACCATCTCACGCTTG +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYVAEIY*TTISRL
Trigger: CAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTAC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGGAAAGTGTTGGAGAATaGATAATAAGTAAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQESVGE*IISKVP
Trigger: CGGAACCTTACTTATTATCCATTCTCCAACACTTTC...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGTCCTCGAAGCTGCTaGATTTCTGTTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSCPRSC*ISVSSS
Trigger: AGAACTGGAAACAGAAATCCAGCAGCTTCGAGGACA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGCTTCTTCTTCTTCTaGCGTTCCAGCTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSCFFFF*RSSFSC
Trigger: ACAAGAGAAGCTGGAACGCCAGAAGAAGAAGAAGCA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTGCTTCTTCTTCTTCTaGCGTTCCAGCTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYCFFFF*RSSFSC
Trigger: ACAAGAGAAGCTGGAACGCCAGAAGAAGAAGAAGCA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGGGGCCGTCTGTTATCTaGATTTCTTGGAATTCGCTT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEGPSVI*ISWNSL
Trigger: AAGCGAATTCCAAGAAATCCAGATAACAGACGGCCC...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAAAGATTCCAGGCAGTTaGGAAGTTTCTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLKIPGS*EVSHLR
Trigger: TCTCAGATGAGAAACTTCTCAACTGCCTGGAATCTT...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAAAGATTCCAGGCAGTTaGGAAGTTTCTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSKIPGS*EVSHLR
Trigger: TCTCAGATGAGAAACTTCTCAACTGCCTGGAATCTT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCAAGCATCTAGGAGATaGGTGAAATCAAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFQASRR*VKSKSM
Trigger: CATAGACTTTGATTTCACTCATCTCCTAGATGCTTG...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTGTTCGGGTCAAAAATaGAGTATTCTCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSCSGQK*SILPDS
Trigger: AGAGTCTGGGAGAATACTTCATTTTTGACCCGAACA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTGTTCGGGTCAAAAATaGAGTATTCTCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYCSGQK*SILPDS
Trigger: AGAGTCTGGGAGAATACTTCATTTTTGACCCGAACA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGGAGAGGTGACAAGTaGATTTATGAACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSWRGDK*IYELHA
Trigger: TGCATGCAGTTCATAAATGCACTTGTCACCTCTCCA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTACAAACTTATCATGGTaGGATTCTGCTGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSTNLSW*DSAGGK
Trigger: TTTCCCACCAGCAGAATCGCACCATGATAAGTTTGT...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAAGAGCTTCAACATATTaGTGTGCATGGTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSRASTY*CAWWTV
Trigger: AACTGTCCACCATGCACAGCAATATGTTGAAGCTCT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTAGAGCTTCAACATATTaGTGTGCATGGTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFRASTY*CAWWTV
Trigger: AACTGTCCACCATGCACAGCAATATGTTGAAGCTCT...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAAAATCAAGATCATATaGAGAGGTGACAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: LHNQVLTHNDKLCASLERKIKII*RGDKCI
Trigger: AATGCACTTGTCACCTCTCCATATGATCTTGATTTT...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTCTTCACTTTCTTCTTTaGAGGCCCACTCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFLHFLL*RPTPIF
Trigger: GAAAATAGGAGTGGGCCTCCAAAGAAGAAAGTGAAG...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCACTTCACTTTCTTCTTTaGAGGCCCACTCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSLHFLL*RPTPIF
Trigger: GAAAATAGGAGTGGGCCTCCAAAGAAGAAAGTGAAG...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAGATTCTGGGCTGTTTTaGTATCCAAAATTCTCAATT +
Preference number: 4 (lower is better)
Translates to: NASHYWSSANTGVYSEVKDSGLF*YPKFSI
Trigger: AATTGAGAATTTTGGATACCAAAACAGCCCAGAATC...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGTGCGATTCTGCTGGTaGGAAATTCTTGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYVRFCW*EILDVF
Trigger: AAAAACATCAAGAATTTCCCACCAGCAGAATCGCAC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACATGGTGCGATTCTGCTaGTGGGAAATTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYMVRFC*WEILDV
Trigger: AACATCAAGAATTTCCCACCAGCAGAATCGCACCAT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAATGGTGCGATTCTGCTaGTGGGAAATTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSMVRFC*WEILDV
Trigger: AACATCAAGAATTTCCCACCAGCAGAATCGCACCAT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATAATGGTGCGATTCTGCTaGTGGGAAATTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIMVRFC*WEILDV
Trigger: AACATCAAGAATTTCCCACCAGCAGAATCGCACCAT...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
3UTR CAA 72 bp AAACAATGCCGAGCTTCTTTACCTGTTAGCGTTGTTTaGGCAGTATCACTGAAATGCGTTAATAATATAAGG +
Preference number: 4 (lower is better)
Translates to: KQCRASLPVSVV*AVSLKCVNNIR
Trigger: CCTTATATTATTAACGCATTTCAGTGATACTGCCAAAACAACGCTAACAGGTAAAGAAGCTCGGCATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTACTTTCAGGCACTGAATaGCTTTGTACTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLLSGTE*LCTDSS
Trigger: AGAAGAATCAGTACAAAGTCATTCAGTGCCTGAAAG...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGCTTTCAGGCACTGAATaGCTTTGTACTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSELSGTE*LCTDSS
Trigger: AGAAGAATCAGTACAAAGTCATTCAGTGCCTGAAAG...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTCAAGCATCTAGGAGATaGGTGAAATCAAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFQASRR*VKSKSM
Trigger: CATAGACTTTGATTTCACTCATCTCCTAGATGCTTG...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCCAAGCATCTAGGAGATaGGTGAAATCAAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFQASRR*VKSKSM
Trigger: CATAGACTTTGATTTCACTCATCTCCTAGATGCTTG...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGCTACAAGGTTGCTCTTaGGTATTTGAGCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSELQGCS*VFELKL
Trigger: AAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAG...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACCTACAAGGTTGCTCTTaGGTATTTGAGCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYLQGCS*VFELKL
Trigger: AAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAG...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCGTTTCTCATCTGAGATaGCAGATCGTAATTCATGAA +
Preference number: 4 (lower is better)
Translates to: VLTHNDKLCASLERNKCFVSHLR*QIVIHE
Trigger: TTCATGAATTACGATCTGGCATCTCAGATGAGAAAC...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGTTTCTCATCTGAGATaGCAGATCGTAATTCATGAA +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYVSHLR*QIVIHE
Trigger: TTCATGAATTACGATCTGGCATCTCAGATGAGAAAC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTAATGCTTTGTTCCATTaGTACAAGGTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSNALFH*YKVALE
Trigger: CTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATT...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTTCAACATATTGCTGTaGATGGTGGACAGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYFNILL*MVDSLS
Trigger: TGACAAACTGTCCACCATGCACAGCAATATGTTGAA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAACATATTGCTGTaGATGGTGGACAGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEFNILL*MVDSLS
Trigger: TGACAAACTGTCCACCATGCACAGCAATATGTTGAA...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAATGTCATTGAGACGGTaGGATAATTCACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSMSLRR*DNSLRS
Trigger: TGACCTAAGTGAATTATCCCACCGTCTCAATGACAT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGATGTCATTGAGACGGTaGGATAATTCACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEMSLRR*DNSLRS
Trigger: TGACCTAAGTGAATTATCCCACCGTCTCAATGACAT...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACATGTCATTGAGACGGTaGGATAATTCACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYMSLRR*DNSLRS
Trigger: TGACCTAAGTGAATTATCCCACCGTCTCAATGACAT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCGAAAGTGTTGGAGAATaGATAATAAGTAAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFESVGE*IISKVP
Trigger: CGGAACCTTACTTATTATCCATTCTCCAACACTTTC...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGGTGCGATTCTGCTGGTaGGAAATTCTTGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEVRFCW*EILDVF
Trigger: AAAAACATCAAGAATTTCCCACCAGCAGAATCGCAC...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTGTTCTCTGGCATTCTaGGTAAAGCTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYCSLAF*VKLIIF
Trigger: AAAGATGATGAGCTTTACCCAGAATGCCAGAGAACA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
CDS-3UTR TCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGCCTTCCACAATTGGTaGAAATCGTTCTCTATTATT +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSAFHNW*KSFSII
Trigger: AATAATAGAGAACGATTTTCACCAATTGTGGAAGGC...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGCCTTCCACAATTGGTaGAAATCGTTCTCTATTATT +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLAFHNW*KSFSII
Trigger: AATAATAGAGAACGATTTTCACCAATTGTGGAAGGC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR TCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACAAACACACTCCTCAATaGTTTTATAATACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYKHTPQ*FYNTVA
Trigger: GGCCACAGTATTATAAAATCATTGAGGAGTGTGTTT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGGGAATCTCAACCACTaGAGTTTGATAATCAATAGA +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLGNLNH*SLIINR
Trigger: TCTATTGATTATCAAACTGCAGTGGTTGAGATTCCC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGGGAATCTCAACCACTaGAGTTTGATAATCAATAGA +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLGNLNH*SLIINR
Trigger: TCTATTGATTATCAAACTGCAGTGGTTGAGATTCCC...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACGGGAATCTCAACCACTaGAGTTTGATAATCAATAGA +
Preference number: 4 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYGNLNH*SLIINR
Trigger: TCTATTGATTATCAAACTGCAGTGGTTGAGATTCCC...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTCTCCAGATGAAGAATaGTTTGTTCCATTGCTACAA +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSSPDEE*FVPLLQ
Trigger: TTGTAGCAATGGAACAAAGCATTCTTCATCTGGAGA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCTCTCCAGATGAAGAATaGTTTGTTCCATTGCTACAA +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFSPDEE*FVPLLQ
Trigger: TTGTAGCAATGGAACAAAGCATTCTTCATCTGGAGA...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR GCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTCTCCAGATGAAGAATaGTTTGTTCCATTGCTACAA +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSESPDEE*FVPLLQ
Trigger: TTGTAGCAATGGAACAAAGCATTCTTCATCTGGAGA...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTATTTGAATGTTCAGTTTaGGTTTGTTTCTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLFECSV*VCFSSP
Trigger: AGGAGACGAGAAACAAACCCAAACTGAACATTCAAA...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATATTTGAATGTTCAGTTTaGGTTTGTTTCTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTIFECSV*VCFSSP
Trigger: AGGAGACGAGAAACAAACCCAAACTGAACATTCAAA...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATAAAATCAAGATCATATaGAGAGGTGACAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYKIKII*RGDKCI
Trigger: AATGCACTTGTCACCTCTCCATATGATCTTGATTTT...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCGAAAGTGTTGGAGAATaGATAATAAGTAAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFESVGE*IISKVP
Trigger: CGGAACCTTACTTATTATCCATTCTCCAACACTTTC...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTTACTGCTATGATGCTTaGTTTGATGTTGTTGACATG +
Preference number: 4 (lower is better)
Translates to: DKLCASLERNKCFLIMTSYCYDA*FDVVDM
Trigger: CATGTCAACAACATCAAACCAAGCATCATAGCAGTA...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATACTGCTATGATGCTTaGTTTGATGTTGTTGACATG +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSYCYDA*FDVVDM
Trigger: CATGTCAACAACATCAAACCAAGCATCATAGCAGTA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTATGTTCTCTGGCATTCTaGGTAAAGATCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLCSLAF*VKIIIF
Trigger: AAAGATGATGATCTTTACCCAGAATGCCAGAGAACA...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAAAATCAAGATCATATaGAGAGGTGACAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFKIKII*RGDKCI
Trigger: AATGCACTTGTCACCTCTCCATATGATCTTGATTTT...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGATTCTGGGCTGTTTTaGTATCCAAAATTCTCAATT +
Preference number: 4 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLDSGLF*YPKFSI
Trigger: AATTGAGAATTTTGGATACCAAAACAGCCCAGAATC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAAAGATAGATAGATTCTaGGCTGTTTTGGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSKIDRF*AVLVSK
Trigger: TTTGGATACCAAAACAGCCCAGAATCTATCTATCTT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CCA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGAAGATAGATAGATTCTaGGCTGTTTTGGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: KLCASLERNKCFLIMTSEKIDRF*AVLVSK
Trigger: TTTGGATACCAAAACAGCCCAGAATCTATCTATCTT...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp TTATTTGAATGTTCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTTaGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTCCGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: LFECSVWVCFSSPLR*RPGSPRLACCSGPR
Trigger: GCGGGGGCCGGAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGAACATTCAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS GCA 90 bp TGGTCCTGCACCTGGCAGTGGAGGTGGTGGAGGTGGACCTGGAATTaGAGATGGAACTCCCTGTCCTCGAAGCTGCTGGATTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: WSCTWQWRWWRWTWN*RWNSLSSKLLDFCF
Trigger: GAAACAGAAATCCAGCAGCTTCGAGGACAGGGAGTTCCATCTGCAATTCCAGGTCCACCTCCACCACCTCCACTGCCAGGTGCAGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATCCCGCGCCTCGCTTGTaGCTCCGGCCCCCGCCGTGT +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYPAPRL*LRPPPC
Trigger: ACACGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGG...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCTTCCCCGCGCCTCGCTaGTTGCTCCGGCCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFFPAPR*LLRPPP
Trigger: CGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGGGAA...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGCTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: LHNQVLTHNDKLCASLERLVSSS*AARFPA
Trigger: CGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAG...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCCCCGCGCCTCGCTTGTaGCTCCGGCCCCCGCCGTGT +
Preference number: 5 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFPAPRL*LRPPPC
Trigger: ACACGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGG...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTCCCGCGCCTCGCTTGTaGCTCCGGCCCCCGCCGTGT +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSPAPRL*LRPPPC
Trigger: ACACGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGG...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACTTCCCCGCGCCTCGCTaGTTGCTCCGGCCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYFPAPR*LLRPPP
Trigger: CGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGGGAA...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCATGCGCTGCCGGTACTaGAAGTCTGGGTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFMRCRY*KSGSMP
Trigger: TGGCATGGACCCAGACTTCAAGTACCGGCAGCGCAT...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGAGGGTGAACTCATGTTaGCTGTTTTTCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQRVNSC*LFFRPP
Trigger: GGGTGGCCTGAAAAACAGCAAACATGAGTTCACCCT...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS-3UTR CAA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTACTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLLVSSS*AARFPA
Trigger: CGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAG...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCACTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSLVSSS*AARFPA
Trigger: CGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAG...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGTCGGGTCAATTGCTCTaGCCAACAGTAAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQSGQLL*PTVKGF
Trigger: GAAGCCTTTTACTGTTGGCAAGAGCAATTGACCCGA...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATGCATGGTGGACAGTTaGTCATACTGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQCMVDS*SYCSLA
Trigger: TGCCAGAGAACAGTATGACAAACTGTCCACCATGCA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGAAAGATTCCAGGCAGTaGAGAAGTTTCTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQKDSRQ*RSFSSE
Trigger: CTCAGATGAGAAACTTCTCAACTGCCTGGAATCTTT...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATTCAGGCCACCAGATTaGGAAGTAGCAGAAATATAC +
Preference number: 5 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQFRPPD*EVAEIY
Trigger: GTATATTTCTGCTACTTCCAAATCTGGTGGCCTGAA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATAGGGTGAACTCATGTTaGCTGTTTTTCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: TINIFTGQAERDQVHREDRVNSC*LFFRPP
Trigger: TGGTGGCCTGAAAAACAGCAAACATGAGTTCACCCT...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGCTTAGGTCATCTTCTTaGTTCTCTTCAAACACTCTC +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQLRSSS*FSSNTL
Trigger: GAGAGTGTTTGAAGAGAACAAAGAAGATGACCTAAG...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGTCCATTTCCTTTCTCTaGTGGTTTTCTTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQSISFL*WFSFSA
Trigger: AGCACTGAAAGAAAACCACAAGAGAAAGGAAATGGA...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAAGTCTCATCACCCTCTTaGTTTATGTCAATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQVSSPS*FMSMSC
Trigger: GCAACTCATTGACATAAACAAAGAGGGTGATGAGAC...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCATGCGCTGCCGGTACTaGAAGTCTGGGTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: VLTHNDKLCASLERNKCFMRCRY*KSGSMP
Trigger: TGGCATGGACCCAGACTTCAAGTACCGGCAGCGCAT...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCCTTTGTCTCTTTGTGGGGTATGGGGTGGGTAGGTCTGACCTAGAATTTCAGAGATTCTGGGCTGTTTaGGTATCCAAAATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ALCLFVGYGVGRSDLEFQRFWAV*VSKILN
Trigger: ATTGAGAATTTTGGATACCAAAACAGCCCAGAATCT...CTGAAATTCTAGGTCAGACCTACCCACCCCATACCCCACAAAGAGACAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCCTCTGTTGTAGCCTCTGGAGGTAGCATGAATGGTCTGATGTCCAGATGTCAATCCATTTCCTTTCTCTaGTGGTTTTCTTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ASVVASGGSMNGLMSRCQSISFL*WFSFSA
Trigger: AGCACTGAAAGAAAACCACAAGAGAAAGGAAATGGA...TTGACATCTGGACATCAGACCATTCATGCTACCTCCAGAGGCTACAACAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGGATGACATGGCTCCATaGTGGCGAGAGCGAGATCTT +
Preference number: 5 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQDDMAP*WRERDL
Trigger: AAGATCTCGCTCTCGCCACAATGGAGCCATGTCATC...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 90 bp TTTGGAGGCCCACTCCTATTTTCTTCTGCAGCCTCTGTATTCCTTTaGCCTTTCATCTGGGAAGGAAATGTCAAGGCCAGTTTTGCAAAT +
Preference number: 5 (lower is better)
Translates to: FGGPLLFSSAASVFL*PFIWEGNVKASFAN
Trigger: ATTTGCAAAACTGGCCTTGACATTTCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGCTGCAGAAGAAAATAGGAGTGGGCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 90 bp AATGCTTTGTTCCATTGCTACAAGGTTGCTCTTGAGTATTTGAGCTaGAACTTTGCCTGCGCTTTCCACATGCTCCAGCTCATCAGGAAA +
Preference number: 5 (lower is better)
Translates to: NALFHCYKVALEYLS*NFACAFHMLQLIRK
Trigger: TTTCCTGATGAGCTGGAGCATGTGGAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 90 bp TCTCCAGATGAAGAATGCTTTGTTCCATTGCTACAAGGTTGCTCTTaGGTATTTGAGCTGAAACTTTGCCTGCGCTTTCCACATGCTCCA +
Preference number: 5 (lower is better)
Translates to: SPDEECFVPLLQGCS*VFELKLCLRFPHAP
Trigger: TGGAGCATGTGGAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATTCTTCATCTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp TCATCATATTCACTCTTAAGCTGGGCTAGTTCTCGGAGTGCGTTCTaGTCAGGAAGATATTTTACAAGATTCTGGATTAGGGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SSYSLLSWASSRSAF*SGRYFTRFWIRASL
Trigger: CAGTGAGGCCCTAATCCAGAATCTTGTAAAATATCTTCCTGACCAGAACGCACTCCGAGAACTAGCCCAGCTTAAGAGTGAATATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATACAGGCTTTTCTCTCTaGGTGGCAGATTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: TINIFTGQAERDQVHREDTGFSL*VADFLK
Trigger: TTTCAGAAAATCTGCCACCAAGAGAGAAAAGCCTGT...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCATCAACATCTTTACAGGACAGGCTGAGAGAGATCAGGTGCACAGAGAAGATGTTGTTTCGGGTCAATaGCTCTTGCCAACAGTAAAA +
Preference number: 5 (lower is better)
Translates to: TINIFTGQAERDQVHREDVVSGQ*LLPTVK
Trigger: TTTTACTGTTGGCAAGAGCAATTGACCCGAAACAAC...ATCTTCTCTGTGCACCTGATCTCTCTCAGCCTGTCCTGTAAAGATGTTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGAGGTGGACCTGGAATaGCAGATGGAACTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYEVDLE*QMELPV
Trigger: GACAGGGAGTTCCATCTGCAATTCCAGGTCCACCTC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCACAACCATCTCACGCTaGATGCTAAAATCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFTTISR*MLKSFF
Trigger: AAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGT...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACGAGGTGGACCTGGAATaGCAGATGGAACTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYEVDLE*QMELPV
Trigger: GACAGGGAGTTCCATCTGCAATTCCAGGTCCACCTC...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGGTGGACCTGGAATaGCAGATGGAACTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSEVDLE*QMELPV
Trigger: GACAGGGAGTTCCATCTGCAATTCCAGGTCCACCTC...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp AGTTCTCGGAGTGCGTTCTGGTCAGGAAGATATTTTACAAGATTCTaGATTAGGGCCTCACTGAGCATCTCTTCATTAACCTCCAAAATA +
Preference number: 5 (lower is better)
Translates to: SSRSAFWSGRYFTRF*IRASLSISSLTSKI
Trigger: TATTTTGGAGGTTAATGAAGAGATGCTCAGTGAGGCCCTAATCCAGAATCTTGTAAAATATCTTCCTGACCAGAACGCACTCCGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp TCATCACCCTCTTTGTTTATGTCAATGAGTTGCTTCTTCTTCTTCTaGCGTTCCAGCTTCTCTTGTTCCGCTTTCTCTTTTGCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SSPSLFMSMSCFFFF*RSSFSCSAFSFASF
Trigger: AAAGCTTGCAAAAGAGAAAGCGGAACAAGAGAAGCTGGAACGCCAGAAGAAGAAGAAGCAACTCATTGACATAAACAAAGAGGGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCTTTCTGAAGCTCTGCTaGAGCTTCCTGACGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFFLKLC*SFLTSC
Trigger: ACAGCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAA...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp ACCAATACACTTCCCTTCCCCCAGATCAGCTTGACCTTTGTGGAAATGCATTTCAGATTCTGGGCTGTTTaGGTATCCAAAATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: TNTLPFPQISLTFVEMHFRFWAV*VSKILN
Trigger: ATTGAGAATTTTGGATACCAAAACAGCCCAGAATCT...GAAATGCATTTCCACAAAGGTCAAGCTGATCTGGGGGAAGGGAAGTGTATTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACGATGACATGGCTCCATaGTGGCGAGAGCGAGATCTT +
Preference number: 5 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYDDMAP*WRERDL
Trigger: AAGATCTCGCTCTCGCCACAATGGAGCCATGTCATC...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGATGACATGGCTCCATaGTGGCGAGAGCGAGATCTT +
Preference number: 5 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLDDMAP*WRERDL
Trigger: AAGATCTCGCTCTCGCCACAATGGAGCCATGTCATC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp TTGCTGTTTTTCAGGCCACCAGATTTGGAAGTAGCAGAAATATACTaGACAACCATCTCACGCTTGATGCTAAAATCCTTCTTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: LLFFRPPDLEVAEIY*TTISRLMLKSFFRK
Trigger: TTTGCGAAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTCCAAATCTGGTGGCCTGAAAAACAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCAGGGTGAACTCATGTTaGCTGTTTTTCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VLTHNDKLCASLERNKCFRVNSC*LFFRPP
Trigger: TGGTGGCCTGAAAAACAGCAAACATGAGTTCACCCT...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTCGGGTCAATTGCTCTaGCCAACAGTAAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYSGQLL*PTVKGF
Trigger: GAAGCCTTTTACTGTTGGCAAGAGCAATTGACCCGA...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCTCGGGTCAATTGCTCTaGCCAACAGTAAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLTHNDKLCASLERNKCFSGQLL*PTVKGF
Trigger: GAAGCCTTTTACTGTTGGCAAGAGCAATTGACCCGA...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGGTTGTTTCGGGTCAATaGCTCTTGCCAACAGTAAAA +
Preference number: 5 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQVVSGQ*LLPTVK
Trigger: TTTTACTGTTGGCAAGAGCAATTGACCCGAAACAAC...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATTTCTGAAGCTCTGCTaGAGCTTCCTGACGAGCTGT +
Preference number: 5 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSFLKLC*SFLTSC
Trigger: ACAGCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTTTTCTGAAGCTCTGCTaGAGCTTCCTGACGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFFLKLC*SFLTSC
Trigger: ACAGCTCGTCAGGAAGCTCAAGCAGAGCTTCAGAAA...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAATCTTCAAAGGTGAGTTaGAAAAGGATGCTCGTGAGA +
Preference number: 5 (lower is better)
Translates to: NASHYWSSANTGVYSEVKSSKVS*KRMLVR
Trigger: TCTCACGAGCATCCTTTTCAAACTCACCTTTGAAGA...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS GCA 90 bp AGATCGGTCATCATGTACTATCAGAGCTGGGGGAATCTCAACCACTaGAGTTTGATAATCAATAGAATGTTGAATAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RSVIMYYQSWGNLNH*SLIINRMLNNRLFS
Trigger: AGAGAAAAGCCTGTTATTCAACATTCTATTGATTATCAAACTGCAGTGGTTGAGATTCCCCCAGCTCTGATAGTACATGATGACCGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS GCA 90 bp GGTAAAGCTCATCATCTTTTCCACAAACTTATCATGGTGCGATTCTaGTGGTGGGAAATTCTTGATGTTTTTCTCCAGATGAAGAATGCT +
Preference number: 5 (lower is better)
Translates to: GKAHHLFHKLIMVRF*WWEILDVFLQMKNA
Trigger: AGCATTCTTCATCTGGAGAAAAACATCAAGAATTTCCCACCAGCAGAATCGCACCATGATAAGTTTGTGGAAAAGATGATGAGCTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
CDS-3UTR CAA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAGTCATCATATTCTGTaGTTTCGGGTCAATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LHNQVLTHNDKLCASLERSHHIL*FRVNCS
Trigger: AGAGCAATTGACCCGAAACAACAGAATATGATGACT...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TCTTGCCAATATCATGGTTTTGGAGTTGTGGCTATAAAAACACCACAGAACCAGCTAAGCCTTCCACAATaGGTGAAAATCGTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: SCQYHGFGVVAIKTPQNQLSLPQ*VKIVLY
Trigger: ATAGAGAACGATTTTCACCAATTGTGGAAGGCTTAG...CTGGTTCTGTGGTGTTTTTATAGCCACAACTCCAAAACCATGATATTGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGCTTAGGTCATCTTCTTaGTTCTCTTCAAACACTCTC +
Preference number: 5 (lower is better)
Translates to: LHNQVLTHNDKLCASLERLRSSS*FSSNTL
Trigger: GAGAGTGTTTGAAGAGAACAAAGAAGATGACCTAAG...CCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AATGCAAGTCATTATTGGTCCAGCGCAAATACAGGTGTTTATTCCGAGGTGAAAATGTCAAGGCCAGTTTaGCAAATAGATCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: NASHYWSSANTGVYSEVKMSRPV*QIDLHS
Trigger: AGAATGCAGATCTATTTGCAAAACTGGCCTTGACAT...TTTCACCTCGGAATAAACACCTGTATTTGCGCTGGACCAATAATGACTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTAGCCTCTGTATTCCTTaGACCTTTCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFSLCIP*TFHLGR
Trigger: CCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGCT...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAAGCCTCTGTATTCCTTaGACCTTTCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLSLCIP*TFHLGR
Trigger: CCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGCT...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTATGCATGGTGGACAGTTaGTCATACTGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLCMVDS*SYCSLA
Trigger: TGCCAGAGAACAGTATGACAAACTGTCCACCATGCA...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGCATGGTGGACAGTTaGTCATACTGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSCMVDS*SYCSLA
Trigger: TGCCAGAGAACAGTATGACAAACTGTCCACCATGCA...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS GCA 90 bp GGTAAAGATCATCATCTTTTCCACAAACTTATCATGGTGCGATTCTaGTGGTGGGAAATTCTTGATGTTTTTCTCCAGATGAAGAATGCT +
Preference number: 5 (lower is better)
Translates to: GKDHHLFHKLIMVRF*WWEILDVFLQMKNA
Trigger: AGCATTCTTCATCTGGAGAAAAACATCAAGAATTTCCCACCAGCAGAATCGCACCATGATAAGTTTGTGGAAAAGATGATGATCTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGTTTACTTTGTCTCAGAAGGTGGCTTGTCAAGCCAGTTATTTGTTCTTTTCACAACCATCTCACGCTaGATGCTAAAATCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LVYFVSEGGLSSQLFVLFTTISR*MLKSFF
Trigger: AAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGT...GAAAAGAACAAATAACTGGCTTGACAAGCCACCTTCTGAGACAAAGTAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTGTACACAGGCTTTTCTCTCTaGGTGGCAGATTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: LERNKCFLIMTSEFRLVYTGFSL*VADFLK
Trigger: TTTCAGAAAATCTGCCACCAAGAGAGAAAAGCCTGT...GTACACTAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTATTCAGGCCACCAGATTaGGAAGTAGCAGAAATATAC +
Preference number: 5 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLFRPPD*EVAEIY
Trigger: GTATATTTCTGCTACTTCCAAATCTGGTGGCCTGAA...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTAAAGATTCCAGGCAGTaGAGAAGTTTCTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFKDSRQ*RSFSSE
Trigger: CTCAGATGAGAAACTTCTCAACTGCCTGGAATCTTT...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGTTGTTTCGGGTCAATaGCTCTTGCCAACAGTAAAA +
Preference number: 5 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLVVSGQ*LLPTVK
Trigger: TTTTACTGTTGGCAAGAGCAATTGACCCGAAACAAC...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTCTCTTTCTGAGTGTGATATTTGCTCCTTTACAATCATTAATGCGCCTATTCAGTCATCATATTCTGTaGTTTCGGGTCAATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLFLSVIFAPLQSLMRLFSHHIL*FRVNCS
Trigger: AGAGCAATTGACCCGAAACAACAGAATATGATGACT...GAATAGGCGCATTAATGATTGTAAAGGAGCAAATATCACACTCAGAAAGAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTCTTTAGGCTCAATCTaGGACCAGTTGATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYSLGSI*DQLILF
Trigger: GAAAAGAATCAACTGGTCCAAGATTGAGCCTAAAGA...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATATGTCAAGGCCAGTTTaGCAAATAGATCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYMSRPV*QIDLHS
Trigger: AGAATGCAGATCTATTTGCAAAACTGGCCTTGACAT...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTCCTTACACACAATGACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCATGTCAAGGCCAGTTTaGCAAATAGATCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: VLTHNDKLCASLERNKCFMSRPV*QIDLHS
Trigger: AGAATGCAGATCTATTTGCAAAACTGGCCTTGACAT...GAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTCATTGTGTGTAAGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTTCTTCAAAGGTGAGTTaGAAAAGGATGCTCGTGAGA +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFSSKVS*KRMLVR
Trigger: TCTCACGAGCATCCTTTTCAAACTCACCTTTGAAGA...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GAAATCTACTATTTTATCCCTCTGTGTCTGTGGGAATATGTTACAGTAACCATATCTTCAAAGGTGAGTTaGAAAAGGATGCTCGTGAGA +
Preference number: 5 (lower is better)
Translates to: EIYYFIPLCLWEYVTVTISSKVS*KRMLVR
Trigger: TCTCACGAGCATCCTTTTCAAACTCACCTTTGAAGA...TATGGTTACTGTAACATATTCCCACAGACACAGAGGGATAAAATAGTAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp AGCTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATGCTATGATGCTTGGTTaGATGTTGTTGACATGTTCT +
Preference number: 5 (lower is better)
Translates to: SLTFVEMHFFPLQLLSVYAMMLG*MLLTCS
Trigger: AGAACATGTCAACAACATCAAACCAAGCATCATAGC...ATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTAGTCTCATCACCCTCTTaGTTTATGTCAATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLVSSPS*FMSMSC
Trigger: GCAACTCATTGACATAAACAAAGAGGGTGATGAGAC...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTAGTCTCATCACCCTCTTaGTTTATGTCAATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLVSSPS*FMSMSC
Trigger: GCAACTCATTGACATAAACAAAGAGGGTGATGAGAC...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 90 bp AGAACTTTACTTCCAACTATAGATTTGGAAGTAGCAGAAATATACTaGACAACCATCTCACGCTTGATGCTAAAATCCTTCTTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: RTLLPTIDLEVAEIY*TTISRLMLKSFFRK
Trigger: TTTGCGAAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTCCAAATCTATAGTTGGAAGTAAAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS-3UTR CAA 90 bp AAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGACAACCATCTCACGCTaGATGCTAAAATCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KLCASLERNKCFLIMTSETTISR*MLKSFF
Trigger: AAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGT...CTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTAGTCATCATATTCTGTaGTTTCGGGTCAATTGCTCT +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSSHHIL*FRVNCS
Trigger: AGAGCAATTGACCCGAAACAACAGAATATGATGACT...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTCTAAGCCTTCCACAATaGGTGAAAATCGTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFLSLPQ*VKIVLY
Trigger: ATAGAGAACGATTTTCACCAATTGTGGAAGGCTTAG...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTCTTAGGTCATCTTCTTaGTTCTCTTCAAACACTCTC +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFLRSSS*FSSNTL
Trigger: GAGAGTGTTTGAAGAGAACAAAGAAGATGACCTAAG...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTTCTTTAGGCTCAATCTaGGACCAGTTGATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFSLGSI*DQLILF
Trigger: GAAAAGAATCAACTGGTCCAAGATTGAGCCTAAAGA...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TTTGATCTTCACAATCAGGTCCTTACACACAATGACAAGTTATGTGCATCTTTATCTTTAGGCTCAATCTaGGACCAGTTGATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: FDLHNQVLTHNDKLCASLSLGSI*DQLILF
Trigger: GAAAAGAATCAACTGGTCCAAGATTGAGCCTAAAGA...TAAAGATGCACATAACTTGTCATTGTGTGTAAGGACCTGATTGTGAAGATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGCTATGATGCTTGGTTaGATGTTGTTGACATGTTCT +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSAMMLG*MLLTCS
Trigger: AGAACATGTCAACAACATCAAACCAAGCATCATAGC...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp CTTGACCTTTGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGCTATGATGCTTGGTTaGATGTTGTTGACATGTTCT +
Preference number: 5 (lower is better)
Translates to: LDLCGNAFLSTPTLKCIFAMMLG*MLLTCS
Trigger: AGAACATGTCAACAACATCAAACCAAGCATCATAGC...AAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACAAAGGTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTCAGATGAAGAATGCTTaGTTCCATTGCTACAAGGTT +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSQMKNA*FHCYKV
Trigger: AACCTTGTAGCAATGGAACAAAGCATTCTTCATCTG...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTGAGTTCAGATTACAGATGAAGAATGCTTaGTTCCATTGCTACAAGGTT +
Preference number: 5 (lower is better)
Translates to: ASLERNKCFLIMTSEFRLQMKNA*FHCYKV
Trigger: AACCTTGTAGCAATGGAACAAAGCATTCTTCATCTG...TAATCTGAACTCAGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCACAGATGAAGAATGCTTaGTTCCATTGCTACAAGGTT +
Preference number: 5 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSQMKNA*FHCYKV
Trigger: AACCTTGTAGCAATGGAACAAAGCATTCTTCATCTG...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCTCCATTTCCTTTCTCTaGTGGTTTTCTTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFSISFL*WFSFSA
Trigger: AGCACTGAAAGAAAACCACAAGAGAAAGGAAATGGA...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp TGTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCATGCTTGGTTTGATGTaGTTGACATGTTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CGNAFLSTPTLKCIFVPFMLGLM*LTCSSK
Trigger: CTTTGAAGAACATGTCAACAACATCAAACCAAGCAT...GAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GACAAGTTATGTGCATCTTTAGAGAGGAACAAATGTTTCCTAATCATGACATCTATGCTTGGTTTGATGTaGTTGACATGTTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: DKLCASLERNKCFLIMTSMLGLM*LTCSSK
Trigger: CTTTGAAGAACATGTCAACAACATCAAACCAAGCAT...AGATGTCATGATTAGGAAACATTTGTTCCTCTCTAAAGATGCACATAACTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS-3UTR CAA 90 bp GTGGAAATGCATTTCTTTCCACTCCAACTCTTAAGTGTATATTTGTTCCTTTCAATGCTTGGTTTGATGTaGTTGACATGTTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VEMHFFPLQLLSVYLFLSMLGLM*LTCSSK
Trigger: CTTTGAAGAACATGTCAACAACATCAAACCAAGCAT...TGAAAGGAACAAATATACACTTAAGAGTTGGAGTGGAAAGAAATGCATTTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp TCTTCGTTGGCGGCCCGGTTCCCCGCGCCTCGCTTGTaGCTCCGGCCCCCGCCGTGTTCCTCGCCGCCACCG +
Preference number: 6 (lower is better)
Translates to: SSLAARFPAPRL*LRPPPCSSPPP
Trigger: CGGTGGCGGCGAGGAACACGGCGGGGGCCGGAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 90 bp GTAATTCGGTCACGCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTCCGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: VIRSRSLGLFLVSSS*AARFPAPRLLLRPP
Trigger: CGGGGGCCGGAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGCGTGACCGAATTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS CCA 72 bp CACGCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTTaGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: HAVWVCFSSPLR*RPGSPRLACCS
Trigger: GGAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS CAA 72 bp TCACGCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SRSLGLFLVSSS*AARFPAPRLLL
Trigger: GAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS CCA 72 bp TGTTCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTTaGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: CSVWVCFSSPLR*RPGSPRLACCS
Trigger: GGAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS CCA 72 bp TCCTGCACCTGGCAGTGGAGGTGGTGGAGGTGGACCTaGAATTGCAGATGGAACTCCCTGTCCTCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SCTWQWRWWRWT*NCRWNSLSSKL
Trigger: CAGCTTCGAGGACAGGGAGTTCCATCTGCAATTCCAGGTCCACCTCCACCACCTCCACTGCCAGGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp ATGTTCAGTTTGGGTTTGTTTCTCGTCTCCTCTTCGTaGGCGGCCCGGTTCCCCGCGCCTCGCTTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: MFSLGLFLVSSS*AARFPAPRLLL
Trigger: GAGCAACAAGCGAGGCGCGGGGAACCGGGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS CCA 72 bp TCTTTCCAGAGGGGGCCGTCTGTTATCTGGATTTCTTaGAATTCGCTTTCTGCGGTCTCTGAATGCTGCACC +
Preference number: 6 (lower is better)
Translates to: SFQRGPSVIWIS*NSLSAVSECCT
Trigger: GGTGCAGCATTCAGAGACCGCAGAAAGCGAATTCCAAGAAATCCAGATAACAGACGGCCCCCTCTGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp AGAGCGAGATCTTTCCAGAGGGGGCCGTCTGTTATCTaGATTTCTTGGAATTCGCTTTCTGCGGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RARSFQRGPSVI*ISWNSLSAVSE
Trigger: TTCAGAGACCGCAGAAAGCGAATTCCAAGAAATCCAGATAACAGACGGCCCCCTCTGGAAAGATCTCGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp GCAGATTTTCTGAAACTTGTAATTCGGTCACGCAGTTaGGGTTTGTTTCTCGTCTCCTCTTCGTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: ADFLKLVIRSRS*GLFLVSSSLAA
Trigger: GGCCGCCAACGAAGAGGAGACGAGAAACAAACCCAAACTGCGTGACCGAATTACAAGTTTCAGAAAATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS TCA 72 bp TTCCATTGCTACAAGGTTGCTCTTGAGTATTTGAGCTaGAACTTTGCCTGCGCTTTCCACATGCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FHCYKVALEYLS*NFACAFHMLQL
Trigger: GAGCTGGAGCATGTGGAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAGCAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp CCCACTCCTATTTTCTTCTGCAGCCTCTGTATTCCTTaGACCTTTCATCTGGGAAGGAAATGTCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: PTPIFFCSLCIP*TFHLGRKCQGQ
Trigger: CTGGCCTTGACATTTCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGCTGCAGAAGAAAATAGGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 90 bp CTTTGGAGGCCCACTCCTATTTTCTTCTGCAGCCTCTGTATTCCTTaGACCTTTCATCTGGGAAGGAAATGTCAAGGCCAGTTTTGCAAA +
Preference number: 6 (lower is better)
Translates to: LWRPTPIFFCSLCIP*TFHLGRKCQGQFCK
Trigger: TTTGCAAAACTGGCCTTGACATTTCCTTCCCAGATGAAAGGTCAAAGGAATACAGAGGCTGCAGAAGAAAATAGGAGTGGGCCTCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 72 bp CTTTGTTCCATTGCTACAAGGTTGCTCTTGAGTATTTaGGCTGAAACTTTGCCTGCGCTTTCCACATGCTCC +
Preference number: 6 (lower is better)
Translates to: LCSIATRLLLSI*AETLPALSTCS
Trigger: GGAGCATGTGGAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAGCAATGGAACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp GACTCTCATAGAGCTTCAACATATTGCTGTGCATGGTaGACAGTTTGTCATACTGTTCTCTGGCATTCTGGG +
Preference number: 6 (lower is better)
Translates to: DSHRASTYCCAW*TVCHTVLWHSG
Trigger: CCCAGAATGCCAGAGAACAGTATGACAAACTGTCCACCATGCACAGCAATATGTTGAAGCTCTATGAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp CCAGACTCTCATAGAGCTTCAACATATTGCTGTGCATaGTGGACAGTTTGTCATACTGTTCTCTGGCATTCT +
Preference number: 6 (lower is better)
Translates to: PDSHRASTYCCA*WTVCHTVLWHS
Trigger: AGAATGCCAGAGAACAGTATGACAAACTGTCCACCATGCACAGCAATATGTTGAAGCTCTATGAGAGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 72 bp GGCTGGTTAAAGACACTCTCAAAGATTCCAGGCAGTTaGGAAGTTTCTCATCTGAGATGCCAGATCGTAATT +
Preference number: 6 (lower is better)
Translates to: GWLKTLSKIPGS*EVSHLRCQIVI
Trigger: AATTACGATCTGGCATCTCAGATGAGAAACTTCTCAACTGCCTGGAATCTTTGAGAGTGTCTTTAACCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 72 bp GAAGAATGCTTTGTTCCATTGCTACAAGGTTGCTCTTaGGTATTTGAGCTGAAACTTTGCCTGCGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: EECFVPLLQGCS*VFELKLCLRFP
Trigger: TGGAAAGCGCAGGCAAAGTTTCAGCTCAAATACTCAAGAGCAACCTTGTAGCAATGGAACAAAGCATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS GCA 72 bp AGTATTCTCCCAGACTCTCATAGAGCTTCAACATATTaGTGTGCATGGTGGACAGTTTGTCATACTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SILPDSHRASTY*CAWWTVCHTVL
Trigger: GAGAACAGTATGACAAACTGTCCACCATGCACAGCAATATGTTGAAGCTCTATGAGAGTCTGGGAGAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp TTCAGGCCACCAGATTTGGAAGTAGCAGAAATATACTaGACAACCATCTCACGCTTGATGCTAAAATCCTTC +
Preference number: 6 (lower is better)
Translates to: FRPPDLEVAEIY*TTISRLMLKSF
Trigger: GAAGGATTTTAGCATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTCCAAATCTGGTGGCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037854.15
ENSMUST00000167619.9
CDS CAA 72 bp TGGCTGGTTAAAGACACTCTCAAAGATTCCAGGCAGTaGAGAAGTTTCTCATCTGAGATGCCAGATCGTAAT +
Preference number: 6 (lower is better)
Translates to: WLVKDTLKDSRQ*RSFSSEMPDRN
Trigger: ATTACGATCTGGCATCTCAGATGAGAAACTTCTCAACTGCCTGGAATCTTTGAGAGTGTCTTTAACCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp CAGTCATCATATTCTGTTGTTTCGGGTCAATTGCTCTaGCCAACAGTAAAAGGCTTCTCTCGTCTCCTAGAA +
Preference number: 6 (lower is better)
Translates to: QSSYSVVSGQLL*PTVKGFSRLLE
Trigger: TTCTAGGAGACGAGAGAAGCCTTTTACTGTTGGCAAGAGCAATTGACCCGAAACAACAGAATATGATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS TCA 72 bp TCAACTTTTGCCTTATTTACACAAGCATCTAGGAGATaGGTGAAATCAAAGTCTATGCGCTGCCGGTACTTG +
Preference number: 6 (lower is better)
Translates to: STFALFTQASRR*VKSKSMRCRYL
Trigger: CAAGTACCGGCAGCGCATAGACTTTGATTTCACTCATCTCCTAGATGCTTGTGTAAATAAGGCAAAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp GAAGTAGCAGAAATATACTGGACAACCATCTCACGCTaGATGCTAAAATCCTTCTTTCGCAAAGGAGCTTTC +
Preference number: 6 (lower is better)
Translates to: EVAEIYWTTISR*MLKSFFRKGAF
Trigger: GAAAGCTCCTTTGCGAAAGAAGGATTTTAGCATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 90 bp TTGCTGTTTTTCAGGCCACCCAGAACTTTACTTCCAACTATAGATTaGGAAGTAGCAGAAATATACTGGACAACCATCTCACGCTTGATG +
Preference number: 6 (lower is better)
Translates to: LLFFRPPRTLLPTID*EVAEIYWTTISRLM
Trigger: CATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTCCAAATCTATAGTTGGAAGTAAAGTTCTGGGTGGCCTGAAAAACAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS CAA 90 bp GTCATCATGTACTATCAGAGCTGGGGGAATCTCAACCACTGCAGTTaGATAATCAATAGAATGTTGAATAACAGGCTTTTCTCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: VIMYYQSWGNLNHCS*IINRMLNNRLFSLG
Trigger: ACCAAGAGAGAAAAGCCTGTTATTCAACATTCTATTGATTATCAAACTGCAGTGGTTGAGATTCCCCCAGCTCTGATAGTACATGATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp CAAAATCAAAGATCGGTCATCATGTACTATCAGAGCTaGGGGAATCTCAACCACTGCAGTTTGATAATCAAT +
Preference number: 6 (lower is better)
Translates to: QNQRSVIMYYQS*GNLNHCSLIIN
Trigger: ATTGATTATCAAACTGCAGTGGTTGAGATTCCCCCAGCTCTGATAGTACATGATGACCGATCTTTGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp CATCTTTTCCACAAACTTATCATGGTGCGATTCTGCTaGTGGGAAATTCTTGATGTTTTTCTCCAGATGAAG +
Preference number: 6 (lower is better)
Translates to: HLFHKLIMVRFC*WEILDVFLQMK
Trigger: CTTCATCTGGAGAAAAACATCAAGAATTTCCCACCAGCAGAATCGCACCATGATAAGTTTGTGGAAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp TCTTTGTTTATGTCAATGAGTTGCTTCTTCTTCTTCTaGCGTTCCAGCTTCTCTTGTTCCGCTTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: SLFMSMSCFFFF*RSSFSCSAFSF
Trigger: AAAAGAGAAAGCGGAACAAGAGAAGCTGGAACGCCAGAAGAAGAAGAAGCAACTCATTGACATAAACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp GACCTTTCATCTGGGAAGGAAATGTCAAGGCCAGTTTaGCAAATAGATCTGCATTCTCATACTTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: DLSSGKEMSRPV*QIDLHSHTSLL
Trigger: AAGAAGAGAAGTATGAGAATGCAGATCTATTTGCAAAACTGGCCTTGACATTTCCTTCCCAGATGAAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS GCA 72 bp ATCATGTACTATCAGAGCTGGGGGAATCTCAACCACTaGAGTTTGATAATCAATAGAATGTTGAATAACAGG +
Preference number: 6 (lower is better)
Translates to: IMYYQSWGNLNH*SLIINRMLNNR
Trigger: CCTGTTATTCAACATTCTATTGATTATCAAACTGCAGTGGTTGAGATTCCCCCAGCTCTGATAGTACATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp CTTTTCCACAAACTTATCATGGTGCGATTCTGCTGGTaGGAAATTCTTGATGTTTTTCTCCAGATGAAGAAT +
Preference number: 6 (lower is better)
Translates to: LFHKLIMVRFCW*EILDVFLQMKN
Trigger: ATTCTTCATCTGGAGAAAAACATCAAGAATTTCCCACCAGCAGAATCGCACCATGATAAGTTTGTGGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CCA 72 bp CTTCCAACTATAGATTTGGAAGTAGCAGAAATATACTaGACAACCATCTCACGCTTGATGCTAAAATCCTTC +
Preference number: 6 (lower is better)
Translates to: LPTIDLEVAEIY*TTISRLMLKSF
Trigger: GAAGGATTTTAGCATCAAGCGTGAGATGGTTGTCCAGTATATTTCTGCTACTTCCAAATCTATAGTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113320.3
CDS CCA 72 bp ATGGTGGACAGTTTGTCATACTGTTCTCTGGCATTCTaGGTAAAGATCATCATCTTTTCCACAAACTTATCA +
Preference number: 6 (lower is better)
Translates to: MVDSLSYCSLAF*VKIIIFSTNLS
Trigger: TGATAAGTTTGTGGAAAAGATGATGATCTTTACCCAGAATGCCAGAGAACAGTATGACAAACTGTCCACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167619.9
CDS CAA 72 bp TACTATCAGAGCTGGGGGAATCTCAACCACTGCAGTTaGATAATCAATAGAATGTTGAATAACAGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: YYQSWGNLNHCS*IINRMLNNRLF
Trigger: GAAAAGCCTGTTATTCAACATTCTATTGATTATCAAACTGCAGTGGTTGAGATTCCCCCAGCTCTGATAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp CAAACACAGTTTTCGGATAATTCTTTAGGCTCAATCTaGGACCAGTTGATTCTTTTCATAGGTATGTCAGGC +
Preference number: 6 (lower is better)
Translates to: QTQFSDNSLGSI*DQLILFIGMSG
Trigger: GCCTGACATACCTATGAAAAGAATCAACTGGTCCAAGATTGAGCCTAAAGAATTATCCGAAAACTGTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9
CDS CAA 72 bp AATCTCAACCACTGCAGTTTGATAATCAATAGAATGTaGAATAACAGGCTTTTCTCTCTTGGTGGCAGATTT +
Preference number: 6 (lower is better)
Translates to: NLNHCSLIINRM*NNRLFSLGGRF
Trigger: AAATCTGCCACCAAGAGAGAAAAGCCTGTTATTCAACATTCTATTGATTATCAAACTGCAGTGGTTGAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037854.15
ENSMUST00000113320.3
ENSMUST00000167619.9