Pregenerated sensors for DHX58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017830Ensembl transcript IDs: ENSMUST00000017974.13
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATaGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCATCCAATG | + |
|
Preference number: 1 (lower is better) Translates to: KVLGQGRDVVVLRTS*HNNSPAFIFQLHPM Trigger: CATTGGATGGAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAGGAGGATGGCTTGCTaGACTCTCCTGCCCCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVLGQGRDVVVLRTSWHNRRMAC*TLLPPA Trigger: TGCAGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCT...ATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| 3UTR CCA 72 bp | GGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATaGCATAATAATTCTCCTGCGTTCATCTTCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GQGRDVVVLRTS*HNNSPAFIFQL Trigger: GAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | ACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGTGTAGGCAAGGCTGCTaGCGAAGCCAGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTRVLARGRRMACWTLLCRQGC*RSQSRR Trigger: CCTCCTGCTCTGGCTTCGGCAGCAGCCTTGCCTACA...CAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | ACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCCCCTCTGGCTTGTGTTCCCTaGTCCGATCAGCATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TRVLARGRRMACWTLLPPLACVP*SDQHLR Trigger: CCGCAGATGCTGATCGGAGCAGGGAACACAAGCCAG...AGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGTATCCAGCATGCGCCTaGACTCCTCGGCGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKEYPACA*TPRRAG Trigger: GCCAGCACGCCGAGGAGTTCAGGCGCATGCTGGATA...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGGTAGGAACTGCCCCTaGTGGATCTCCCGATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKEGRNCP*WISRWA Trigger: GGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACC...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCCCCTGCAGTTTGACCTACCCGGGCCTGGACCATaGAGATCTCATTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGEGGWLAGLSCPLQFDLPGPGP*RSHWSG Trigger: TCCTGACCAATGAGATCTCCATGGTCCAGGCCCGGG...TAGGTCAAACTGCAGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCCCCTGGGTTCACATTGACGTaGTGGGTGCCCTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVLARGRRMACWTLLPPGFTLT*WVPSTF Trigger: GAAAGTGGAGGGCACCCACCACGTCAATGTGAACCC...AGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCTCTGCCACACTTGTaGCCACTAGAAGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLTRVLARGRRMACWTLLPLPHL*PLEGSG Trigger: TCCTGAGCCTTCTAGTGGCCACAAGTGTGGCAGAGG...CAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTTCACATTGACGTGGTaGGTGCCCTCCACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYPDQSASQGKEDGLLDFTLTW*VPSTFR Trigger: GCGGAAAGTGGAGGGCACCCACCACGTCAATGTGAA...GTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | AAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACCAAAGCTGTAGGATGTaGTCAATGGCCCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYPDQSASQGKEDGLLDQSCRM*SMAPWS Trigger: GCTCCAAGGGGCCATTGATCACATCCTACAGCTTTG...GTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGCCCGGGACCACTTTTTaGCCTGGATCTTCCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKGYPDQSASQGKEDGLLPGTTF*PGSSLE Trigger: CTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGG...CAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCCCCTCAGGATATCGAAGACTaGTATGGAGAAAGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRVLARGRRMACWTLLPPQDIED*YGERHP Trigger: CGGGTGCCTTTCTCCATACCAGTCTTCGATATCCTG...AGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGCCCCGAGCTGCTAGCTaGCCCAGCACATTTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: IKGYPDQSASQGKEDGLLPRAAS*PSTFLW Trigger: CCATAAAAATGTGCTGGGCCAGCTAGCAGCTCGGGG...CAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGGACCACTTTTTGGCCTaGATCTTCCCTCGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLTRVLARGRRMACWTLLDHFLA*IFPRGV Trigger: AACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTC...CAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGTCCTGCTGGTCTTTCTaGGTCATGTGTGTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKESCWSF*VMCVLW Trigger: CCAGAGCACACACATGACCCAGAAAGACCAGCAGGA...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | AGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGTCTGGGTCATGTGTGTaGTCTGGCTTGTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKGYPDQSASQGKEDGLSGSCV*SGLCSL Trigger: CAGGGAACACAAGCCAGAGCACACACATGACCCAGA...CAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGTCCTGGATCACTTCCTaGTGGTCTTTCTGGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKESWITS*WSFWVM Trigger: CATGACCCAGAAAGACCAGCAGGAAGTGATCCAGGA...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGGGTACCGGCTCAAGATaGTGTTGTAGACGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIKGYPDQSASQGKEDGLGTGSR*CCRRCP Trigger: AGGACACCGTCTACAACACCATCTTGAGCCGGTACC...CAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AAAACCTACAAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCACCCCTTGGAGCTTGGTaGCCCCTCCAGTGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTYKVLGQGRDVVVLRTSPLGAW*PLQCLG Trigger: CCCCAGGCACTGGAGGGGCCACCAAGCTCCAAGGGG...TGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTTGTAGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTGCTGCTCATACATCTaGGTTCCAAATTGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGYPDQSASQGKEDGLLDCCSYI*VPNCCF Trigger: GAAGCAACAATTTGGAACCCAGATGTATGAGCAGCA...GTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGCGTTCATCTTCCAACTCCATCCAATGTGTTTAAGATCTCTGCAGCAGTGCTCCGGTAGGAACTaGCCCTGCTGGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPAFIFQLHPMCLRSLQQCSGRN*PCWISR Trigger: TCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCA...CTGCTGCAGAGATCTTAAACACATTGGATGGAGTTGGAAGATGAACGCAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTGCGTTCATCTTCCAACTCCATCCAATGTGTTTAAGATCTCTGCAGCAACTCTGCCGTACAGATaGGCAGGTCGTGGCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSCVHLPTPSNVFKISAATLPYR*AGRGSE Trigger: CTCGGAGCCACGACCTGCTCATCTGTACGGCAGAGT...TGCTGCAGAGATCTTAAACACATTGGATGGAGTTGGAAGATGAACGCAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGTGGGTTCCAAATTGTTaGTTCAAGTCAGGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKEWVPNC*FKSGIS Trigger: AGAGATGCCTGACTTGAAGCAACAATTTGGAACCCA...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | AGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCACAACTGTACCACTTaGTGCTCATACATCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RIKGYPDQSASQGKEDGLHNCTT*CSYIWV Trigger: AACCCAGATGTATGAGCAGCAAGTGGTACAGTTGTG...CAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATTACACCCGCTGTTCCTaGAGTCCAGCCTCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLGQGRDVVVLRTSWHNYTRCS*SPASAA Trigger: TGCGGCAGAGGCTGGACTCCAGGAACAGCGGGTGTA...ATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGCCCAGCACATTTTTATaGTCATCAAACAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKGYPDQSASQGKEDGLLPSTFL*SSNSFS Trigger: GCTGAAGCTGTTTGATGACCATAAAAATGTGCTGGG...CAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATACCACCACATTGCACTaGGCGATATCCAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVLGQGRDVVVLRTSWHNTTTLH*AISSPS Trigger: GGAGGGGCTGGATATCGCTCAGTGCAATGTGGTGGT...ATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATCCAGTACCACCACCTTaGCTCTGTCTACCGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KVLGQGRDVVVLRTSWHNPVPPP*LCLPSL Trigger: TAGAGACGGTAGACAGAGGCAAGGTGGTGGTACTGG...ATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGCGTTCATCTTCCAACTCCATCCAATGTGTTTAAGATCTCTGCAGCAGCAGACAGGCTTTGTGTaGAGTCCTGCAGGATATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPAFIFQLHPMCLRSLQQQTGFV*SPAGYR Trigger: TCGATATCCTGCAGGACTGCACACAAAGCCTGTCTG...CTGCTGCAGAGATCTTAAACACATTGGATGGAGTTGGAAGATGAACGCAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGATCTCTAGTTGTTGGTaGATTTGGTTCATAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSRIKGYPDQSASQGKEISSCW*IWFISF Trigger: AAAGCTTATGAACCAAATCCACCAACAACTAGAGAT...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | TTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCATCCAAAGTTGGGGTTCACATTaGCGTGGTGGGTGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEHHGIIILLRSSSNSIQSWGSH*RGGCPP Trigger: TGGAGGGCACCCACCACGTCAATGTGAACCCCAACT...TTGGATGGAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | CTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAATTCTAGCGCACCACCACATTaGACTGAGCGATATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGQGRDVVVLRTSWHNNSSAPPH*TERYPA Trigger: GGCTGGATATCGCTCAGTGCAATGTGGTGGTGCGCT...AGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | CTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAATTCTGTCATGTGTGTGCTCTaGCTTGTGTTCCCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGQGRDVVVLRTSWHNNSVMCVL*LVFPAP Trigger: CGGAGCAGGGAACACAAGCCAGAGCACACACATGAC...AGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | AACAAAACCTACAAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACACAGGGTTCTGGGAGGTaGTATAGTAGACCGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKTYKVLGQGRDVVVLRTQGSGR*YSRPRS Trigger: ACTTCTCGGTCTACTATACCACCTCCCAGAACCCTG...TGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTTGTAGGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | AACAAAACCTACAAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCAGCGAGAATTCTCTaGGCTCTACGTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTYKVLGQGRDVVVLRTSARIL*ALRVHP Trigger: AGGATGAACACGTAGAGCTCAGAGAATTCTCGCTGA...TGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTTGTAGGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | CTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAATTCTCCTCCTCAGAGCTGTTaGGTGCCAACTGTAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LGQGRDVVVLRTSWHNNSPPQSC*VPTVTT Trigger: AGTTGTTACAGTTGGCACTCAACAGCTCTGAGGAGG...AGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR TCA 90 bp | GTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCGGCCACCATACAGTTaGTGCAGAGAAGTTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VVLRTSWHNNSPAFIFQLRPPYS*CREVAR Trigger: ACGTGCAACTTCTCTGCATCAACTGTATGGTGGCCG...GAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | GTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCACTAGAGATGCTTGCTaGAAGTCCCGGATCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVLRTSWHNNSPAFIFQLTRDAC*KSRILA Trigger: GGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGT...GAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | GTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCCATCCCTGAACTCCTaGATCACTTCCTGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLRTSWHNNSPAFIFQLPSLNS*ITSCWS Trigger: AGACCAGCAGGAAGTGATCCAGGAGTTCAGGGATGG...GAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAATCTCTAGATGCCTCTTaGCTACAAAGGCAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVLRTSWHNNSPAFIFQSLDAS*LQRQLP Trigger: GGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGA...TTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR GCA 90 bp | TTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCATCCAACCAGGACTCCCAAACTaGTTCAGTAAGATCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHHGIIILLRSSSNSIQPGLPN*FSKILS Trigger: GGAAAGGATCTTACTGAAGCAGTTTGGGAGTCCTGG...TTGGATGGAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | AGTTGCACGTGCTCCGGTAGGAACTGCCCCTGCTGGATCTCCCGATaGGCCGCGCGTGCTGCCCGCTTAACTAGAGATGCTTGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCTCSGRNCPCWISR*AARAARLTRDACCK Trigger: CTTGCAGCAAGCATCTCTAGTTAAGCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | CAGTTGATGCAGAGAAGTTGCACGTGCTCCGGTAGGAACTGCCCCTaGTGGATCTCCCGATGGGCCGCGCGTGCTGCCCGCTTAACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLMQRSCTCSGRNCP*WISRWAARAARLTR Trigger: TCTAGTTAAGCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | ACCATACAGTTGATGCAGAGAAGTTGCACGTGCTCCGGTAGGAACTaGCCCTGCTGGATCTCCCGATGGGCCGCGCGTGCTGCCCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TIQLMQRSCTCSGRN*PCWISRWAARAARL Trigger: TAAGCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAACTGTATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | CCAGTACCACCACCTTGCCTCTGTCTACCGTCTCTAGATGCCTCTTaGCTACAAAGGCAGCTGCCCGGGTCTTCCCAGCACCCGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPPPCLCLPSLDAS*LQRQLPGSSQHPWA Trigger: TGCCCACGGGTGCTGGGAAGACCCGGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGACGGTAGACAGAGGCAAGGTGGTGGTACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 90 bp | CCACTTTCCGCAGGTCACTCCCGTAGCCCACGGCCACCATACAGTTaGTGCAGAGAAGTTGCACGTGCTCCGGTAGGAACTGCCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLSAGHSRSPRPPYS*CREVARAPVGTAPA Trigger: AGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAACTGTATGGTGGCCGTGGGCTACGGGAGTGACCTGCGGAAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | GACCAGCTCGAGCACGACCCCGGGCCTGGACCATGGAGATCTCATTaGTCAGGAGCCCATAGCGCACCACCACATTGCACTGAGCGATAT | + |
|
Preference number: 5 (lower is better) Translates to: DQLEHDPGPGPWRSH*SGAHSAPPHCTERY Trigger: ATATCGCTCAGTGCAATGTGGTGGTGCGCTATGGGCTCCTGACCAATGAGATCTCCATGGTCCAGGCCCGGGGTCGTGCTCGAGCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | AGTACACACTCTGACCAGCTCGAGCACGACCCCGGGCCTGGACCATaGAGATCTCATTGGTCAGGAGCCCATAGCGCACCACCACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: STHSDQLEHDPGPGP*RSHWSGAHSAPPHC Trigger: GCAATGTGGTGGTGCGCTATGGGCTCCTGACCAATGAGATCTCCATGGTCCAGGCCCGGGGTCGTGCTCGAGCTGGTCAGAGTGTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | TTGATGCAGAGAAGTTGCACGTGCTCCGGTAGGAACTGCCCCTGCTaGATCTCCCGATGGGCCGCGCGTGCTGCCCGCTTAACTAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LMQRSCTCSGRNCPC*ISRWAARAARLTRD Trigger: ATCTCTAGTTAAGCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | AGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGATGGCCCCTTGGAGCTaGGTGGCCCCTCCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RIKGYPDQSASQGKEDGLMAPWS*VAPPVP Trigger: AGGCACTGGAGGGGCCACCAAGCTCCAAGGGGCCAT...CAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | ACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGAAGTTGGGGTTCACATaGACGTGGTGGGTGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLTRVLARGRRMACWTLLKLGFT*TWWVPS Trigger: GGAGGGCACCCACCACGTCAATGTGAACCCCAACTT...CAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | ACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGATCAGCATCTGCGGCTaGATGCCCACAGTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLTRVLARGRRMACWTLLISICG*MPTVCR Trigger: CCTACAGACTGTGGGCATCAAGCCGCAGATGCTGAT...CAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGGCTAGCACTCTGGTCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | CCAGGGGAAGGAGGATGGCTTGCTGGACTCTCCTGCCCCCTGCAGTTTGACCTATCCCGGATCTTGGCCTaGAACTCATCAGGGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PGEGGWLAGLSCPLQFDLSRILA*NSSGSI Trigger: GATGGACCCTGATGAGTTCAAGGCCAAGATCCGGGA...TAGGTCAAACTGCAGGGGGCAGGAGAGTCCAGCAAGCCATCCTCCTTCCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 90 bp | GGTTCTGGGAGGTGGTATAGTAGACCGAGAAGTTGGGGTTCACATTaGCGTGGTGGGTGCCCTCCACTTTCCGCAGGTCACTCCCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGRWYSRPRSWGSH*RGGCPPLSAGHSRS Trigger: GCTACGGGAGTGACCTGCGGAAAGTGGAGGGCACCCACCACGTCAATGTGAACCCCAACTTCTCGGTCTACTATACCACCTCCCAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | CTATTGACCAGTACCACCACCTTGCCTCTGTCTACCGTCTCTAGATaGCTCTTGGCTACAAAGGCAGCTGCCCGGGTCTTCCCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LLTSTTTLPLSTVSR*LLATKAAARVFPAP Trigger: GGGTGCTGGGAAGACCCGGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGACGGTAGACAGAGGCAAGGTGGTGGTACTGGTCAATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | CCATGGAGATCTCATTGGTCAGGAGCCCATAGCGCACCACCACATTaGACTGAGCGATATCCAGCCCCTCCTCTGCCACACTTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PWRSHWSGAHSAPPH*TERYPAPPLPHLWP Trigger: TGGCCACAAGTGTGGCAGAGGAGGGGCTGGATATCGCTCAGTGCAATGTGGTGGTGCGCTATGGGCTCCTGACCAATGAGATCTCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | TTGAGTGCCAACTGTAACAACTCTGCCGTACAGATGAGCAGGTCGTaGCTCCGAGCCATCAGGCCAAAGCCAGCTCGGGATCCCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSANCNNSAVQMSRS*LRAIRPKPARDPMS Trigger: GGACATGGGATCCCGAGCTGGCTTTGGCCTGATGGCTCGGAGCCACGACCTGCTCATCTGTACGGCAGAGTTGTTACAGTTGGCACTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | CCGCAAATGCAGCGCATACACCCGCTGTTCCTGGAGTCCAGCCTCTaGCGCATCCTTGCACAACTGTACCACTTGCTGCTCATACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQMQRIHPLFLESSL*RILAQLYHLLLIHL Trigger: CAGATGTATGAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGGACTCCAGGAACAGCGGGTGTATGCGCTGCATTTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | ACAGTCCAGTGTTTATCCAGCATGCGCCTGAACTCCTCGGCGTGCTaGCTCACCAGGTGTACCCTATTGACCAGTACCACCACCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TVQCLSSMRLNSSAC*LTRCTLLTSTTTLP Trigger: AGGCAAGGTGGTGGTACTGGTCAATAGGGTACACCTGGTGAGCCAGCACGCCGAGGAGTTCAGGCGCATGCTGGATAAACACTGGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | CTCTGCAGCAGAATAAAGGGGTACCCTGACCAGAGTGCTAGCCAGGGGAAGGAGTGTGTGTGCTCTGGCTaGTGTTCCCTGCTCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LCSRIKGYPDQSASQGKECVCSG*CSLLRS Trigger: TGATCGGAGCAGGGAACACAAGCCAGAGCACACACA...CTCCTTCCCCTGGCTAGCACTCTGGTCAGGGTACCCCTTTATTCTGCTGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | GGGGCTCTGCCTTCTTCAGCTTCTGTTCTAGGTACCGGCTCAAGATaGTGTTGTAGACGGTGTCCTTGTGGGTGTGGTGACACTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GALPSSASVLGTGSR*CCRRCPCGCGDTRP Trigger: TGGACGAGTGTCACCACACCCACAAGGACACCGTCTACAACACCATCTTGAGCCGGTACCTAGAACAGAAGCTGAAGAAGGCAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | GGGTTCTCAGGACCCCGAGCTGCTAGCTGGCCCAGCACATTTTTATaGTCATCAAACAGCTTCAGCAGCCAGCTTTCAGCACGCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: GFSGPRAASWPSTFL*SSNSFSSQLSARTI Trigger: GATGGTGCGTGCTGAAAGCTGGCTGCTGAAGCTGTTTGATGACCATAAAAATGTGCTGGGCCAGCTAGCAGCTCGGGGTCCTGAGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | CAGACAGGCTTTGTGTGCAGTCCTGCAGGATATCGAAGACTGGTATaGAGAAAGGCACCCGGGACCACTTTTTGGCCTGGATCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTGFVCSPAGYRRLV*RKAPGTTFWPGSSL Trigger: GAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCCTGCAGGACTGCACACAAAGCCTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | ATCCTGTGCGCGCCTTTGGCAGAGGTCATACTGCTTGCAGGGCTTTaGGTTATGCATCAGCAGCTGGGAGTAGCAATTCTTTGGCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: ILCAPLAEVILLAGL*VMHQQLGVAILWRH Trigger: ATGTCGCCAAAGAATTGCTACTCCCAGCTGCTGATGCATAACCCAAAGCCCTGCAAGCAGTATGACCTCTGCCAAAGGCGCGCACAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | ACACTTGTGGCCACTAGAAGGCTCAGGATACCATCCCTGAACTCCTaGATCACTTCCTGCTGGTCTTTCTGGGTCATGTGTGTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLVATRRLRIPSLNS*ITSCWSFWVMCVLW Trigger: CCAGAGCACACACATGACCCAGAAAGACCAGCAGGAAGTGATCCAGGAGTTCAGGGATGGTATCCTGAGCCTTCTAGTGGCCACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | GAGCTCAGACAGGCTTTGTGTGCAGTCCTGCAGGATATCGAAGACTaGTATGGAGAAAGGCACCCGGGACCACTTTTTGGCCTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELRQALCAVLQDIED*YGERHPGPLFGLDL Trigger: AAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCCTGCAGGACTGCACACAAAGCCTGTCTGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | GGATATCGAAGACTGGTATGGAGAAAGGCACCCGGGACCACTTTTTaGCCTGGATCTTCCCTCGAGGTGTTTCCAGTAGTATGCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GYRRLVWRKAPGTTF*PGSSLEVFPVVCFR Trigger: TCGGAAGCATACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | TGGAGTCCAGCCTCTGCCGCATCCTTGCACAACTGTACCACTTGCTaGTCATACATCTGGGTTCCAAATTGTTGCTTCAAGTCAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WSPASAASLHNCTTC*SYIWVPNCCFKSGI Trigger: GATGCCTGACTTGAAGCAACAATTTGGAACCCAGATGTATGAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGGACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | GCTTCAGCAGCCAGCTTTCAGCACGCACCATCTGTGTTTTTGTGGTaGGTTCTCTGTCGTAAAAATCTTGCAACATGTCAAGGGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAASFQHAPSVFLW*VLCRKNLATCQGRP Trigger: GGGACGCCCTTGACATGTTGCAAGATTTTTACGACAGAGAACGCACCACAAAAACACAGATGGTGCGTGCTGAAAGCTGGCTGCTGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | GTTCTGGTGAAGATGATACCCCGAGTGTGGCCAGGACTCCCAAACTaGTTCAGTAAGATCCTTTCCAGCATCTCCAACTTCGGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLVKMIPRVWPGLPN*FSKILSSISNFGFS Trigger: TGAGAACCCGAAGTTGGAGATGCTGGAAAGGATCTTACTGAAGCAGTTTGGGAGTCCTGGCCACACTCGGGGTATCATCTTCACCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 90 bp | TCGAAGACTGGTATGGAGAAAGGCACCCGGGACCACTTTTTGGCCTaGATCTTCCCTCGAGGTGTTTCCAGTAGTATGCTTCCGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKTGMEKGTRDHFLA*IFPRGVSSSMLPIL Trigger: CAAAATCGGAAGCATACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 90 bp | CCTGGATCTTCCCTCGAGGTGTTTCCAGTAGTATGCTTCCGATTTTaGGCACTGGCAAGGTCACTGATTTGTAGATCATCTGGAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSSLEVFPVVCFRF*ALARSLICRSSGSP Trigger: GGGGCTTCCAGATGATCTACAAATCAGTGACCTTGCCAGTGCTCAAAATCGGAAGCATACTACTGGAAACACCTCGAGGGAAGATCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | AAGGTGCTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATACCTCCAGAGCCTCATaGGTTAGCTCCCGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KVLGQGRDVVVLRTSWHNTSRAS*VSSRFI Trigger: GATGAAGCGGGAGCTAACCAATGAGGCTCTGGAGGT...ATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAGCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | GTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCACCCGGGACCACTTTTaGGCCTGGATCTTCCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VVLRTSWHNNSPAFIFQLTRDHF*AWIFPR Trigger: TCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGT...GAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | CTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAATTCTTCCTCCTCAGAGCTGTaGAGTGCCAACTGTAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGQGRDVVVLRTSWHNNSSSSEL*SANCNN Trigger: GTTGTTACAGTTGGCACTCAACAGCTCTGAGGAGGA...AGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 90 bp | CACAACTGTACCACTTGCTGCTCATACATCTGGGTTCCAAATTGTTaGTTCAAGTCAGGCATCTCTAGTTGTTGGTGGATTTGGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: HNCTTCCSYIWVPNC*FKSGISSCWWIWFI Trigger: TATGAACCAAATCCACCAACAACTAGAGATGCCTGACTTGAAGCAACAATTTGGAACCCAGATGTATGAGCAGCAAGTGGTACAGTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | CTTGGGCAAGGGAGGGATGTTGTAGTTCTTAGAACATCATGGCATAATAATTCTCATATAATGATATTCTaGCCCTCCAGAGCAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGQGRDVVVLRTSWHNNSHIMIF*PSRAGK Trigger: CTTACCTGCTCTGGAGGGCAAGAATATCATTATATG...AGAATTATTATGCCATGATGTTCTAAGAACTACAACATCCCTCCCTTGCCCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | TTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACTCCATCCAACATCTGGGTTCCAAATaGTTGCTTCAAGTCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEHHGIIILLRSSSNSIQHLGSK*LLQVRH Trigger: ATGCCTGACTTGAAGCAACAATTTGGAACCCAGATG...TTGGATGGAGTTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS-3UTR CAA 90 bp | GTTGTAGTTCTTAGAACATCATGGCATAATAATTCTCCTGCGTTCATCTTCCAACAGTCCTTAAAGACCTaGTTAATGACCACAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVVLRTSWHNNSPAFIFQQSLKT*LMTTGF Trigger: GAACCCTGTGGTCATTAACAAGGTCTTTAAGGACTG...TTGGAAGATGAACGCAGGAGAATTATTATGCCATGATGTTCTAAGAACTACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | CAGAGAAGTTGCACGTGCTCCGGTAGGAACTGCCCCTaGTGGATCTCCCGATGGGCCGCGCGTGCTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSCTCSGRNCP*WISRWAARAAR Trigger: GCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | AGAAGTTGCACGTGCTCCGGTAGGAACTGCCCCTGCTaGATCTCCCGATGGGCCGCGCGTGCTGCCCGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RSCTCSGRNCPC*ISRWAARAARL Trigger: TAAGCGGGCAGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | TTGATGCAGAGAAGTTGCACGTGCTCCGGTAGGAACTaGCCCTGCTGGATCTCCCGATGGGCCGCGCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LMQRSCTCSGRN*PCWISRWAARA Trigger: AGCACGCGCGGCCCATCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | TCTGACCAGCTCGAGCACGACCCCGGGCCTGGACCATaGAGATCTCATTGGTCAGGAGCCCATAGCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SDQLEHDPGPGP*RSHWSGAHSAP Trigger: TGGTGCGCTATGGGCTCCTGACCAATGAGATCTCCATGGTCCAGGCCCGGGGTCGTGCTCGAGCTGGTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | ACCAGTACCACCACCTTGCCTCTGTCTACCGTCTCTAGATGCCTCTaGGCTACAAAGGCAGCTGCCCGGGTCTTCCCAGCACCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTTTLPLSTVSRCL*ATKAAARVFPAPVG Trigger: GCCCACGGGTGCTGGGAAGACCCGGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGACGGTAGACAGAGGCAAGGTGGTGGTACTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | CAGCGCATACACCCGCTGTTCCTGGAGTCCAGCCTCTaGCGCATCCTTGCACAACTGTACCACTTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QRIHPLFLESSL*RILAQLYHLLL Trigger: GAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGGACTCCAGGAACAGCGGGTGTATGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | GTGCTCTGGCTTGTGTTCCCTGCTCCGATCAGCATCTaGGGCTTGATGCCCACAGTCTGTAGGCAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLWLVFPAPISI*GLMPTVCRQGC Trigger: GCAGCCTTGCCTACAGACTGTGGGCATCAAGCCGCAGATGCTGATCGGAGCAGGGAACACAAGCCAGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | GCCGCGCGTGCTGCCCGCTTAACTAGAGATGCTTGCTaGAAGTCCCGGATCTTGGCCTTGAACTCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AARAARLTRDAC*KSRILALNSSG Trigger: CCCTGATGAGTTCAAGGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGTTAAGCGGGCAGCACGCGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | ATGCGCCTGAACTCCTCGGCGTGCTGGCTCACCAGGTGTACCCTATaGACCAGTACCACCACCTTGCCTCTGTCTACCGTCTCTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: MRLNSSACWLTRCTL*TSTTTLPLSTVSRC Trigger: GCATCTAGAGACGGTAGACAGAGGCAAGGTGGTGGTACTGGTCAATAGGGTACACCTGGTGAGCCAGCACGCCGAGGAGTTCAGGCGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 72 bp | GGGTTGTTACAGTCCAGTGTTTATCCAGCATGCGCCTaGACTCCTCGGCGTGCTGGCTCACCAGGTGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLQSSVYPACA*TPRRAGSPGVP Trigger: GGGTACACCTGGTGAGCCAGCACGCCGAGGAGTTCAGGCGCATGCTGGATAAACACTGGACTGTAACAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 72 bp | GCAGGTCACTCCCGTAGCCCACGGCCACCATACAGTTaGTGCAGAGAAGTTGCACGTGCTCCGGTAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: AGHSRSPRPPYS*CREVARAPVGT Trigger: AGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAACTGTATGGTGGCCGTGGGCTACGGGAGTGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | CCCGCTGTTCCTGGAGTCCAGCCTCTGCCGCATCCTTaGACAACTGTACCACTTGCTGCTCATACATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAVPGVQPLPHP*TTVPLAAHTSG Trigger: CCCAGATGTATGAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGGACTCCAGGAACAGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | TCTCATTGGTCAGGAGCCCATAGCGCACCACCACATTaGACTGAGCGATATCCAGCCCCTCCTCTGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SHWSGAHSAPPH*TERYPAPPLPH Trigger: GTGTGGCAGAGGAGGGGCTGGATATCGCTCAGTGCAATGTGGTGGTGCGCTATGGGCTCCTGACCAATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | ACGGCCACCATACAGTTGATGCAGAGAAGTTGCACGTaGTCCGGTAGGAACTGCCCCTGCTGGATCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TATIQLMQRSCT*SGRNCPCWISR Trigger: TCGGGAGATCCAGCAGGGGCAGTTCCTACCGGAGCACGTGCAACTTCTCTGCATCAACTGTATGGTGGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | ACCACCTTGCCTCTGTCTACCGTCTCTAGATGCCTCTaGGCTACAAAGGCAGCTGCCCGGGTCTTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTLPLSTVSRCL*ATKAAARVFPA Trigger: TGCTGGGAAGACCCGGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGACGGTAGACAGAGGCAAGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | AGTACCACCACCTTGCCTCTGTCTACCGTCTCTAGATaGCTCTTGGCTACAAAGGCAGCTGCCCGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STTTLPLSTVSR*LLATKAAARVF Trigger: GAAGACCCGGGCAGCTGCCTTTGTAGCCAAGAGGCATCTAGAGACGGTAGACAGAGGCAAGGTGGTGGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | GATCCTGTGCGCGCCTTTGGCAGAGGTCATACTGCTTaGAGGGCTTTGGGTTATGCATCAGCAGCTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DPVRAFGRGHTA*RALGYASAAGS Trigger: ACTCCCAGCTGCTGATGCATAACCCAAAGCCCTGCAAGCAGTATGACCTCTGCCAAAGGCGCGCACAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | TGTTTATCCAGCATGCGCCTGAACTCCTCGGCGTGCTaGCTCACCAGGTGTACCCTATTGACCAGTACCACC | + |
|
Preference number: 6 (lower is better) Translates to: CLSSMRLNSSAC*LTRCTLLTSTT Trigger: GGTGGTACTGGTCAATAGGGTACACCTGGTGAGCCAGCACGCCGAGGAGTTCAGGCGCATGCTGGATAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | AACTGTAACAACTCTGCCGTACAGATGAGCAGGTCGTaGCTCCGAGCCATCAGGCCAAAGCCAGCTCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: NCNNSAVQMSRS*LRAIRPKPARD Trigger: ATCCCGAGCTGGCTTTGGCCTGATGGCTCGGAGCCACGACCTGCTCATCTGTACGGCAGAGTTGTTACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 72 bp | AGGTGGTATAGTAGACCGAGAAGTTGGGGTTCACATTaGCGTGGTGGGTGCCCTCCACTTTCCGCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RWYSRPRSWGSH*RGGCPPLSAGH Trigger: GTGACCTGCGGAAAGTGGAGGGCACCCACCACGTCAATGTGAACCCCAACTTCTCGGTCTACTATACCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | GCCCGCTTAACTAGAGATGCTTGCTGCAAGTCCCGGATCTTGGCCTaGAACTCATCAGGGTCCATCTTCTGTACAGCAGCCACAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARLTRDACCKSRILA*NSSGSIFCTAATAF Trigger: GAAGGCTGTGGCTGCTGTACAGAAGATGGACCCTGATGAGTTCAAGGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGTTAAGCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | CGTGCTGCCCGCTTAACTAGAGATGCTTGCTGCAAGTCCCGGATCTaGGCCTTGAACTCATCAGGGTCCATCTTCTGTACAGCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RAARLTRDACCKSRI*ALNSSGSIFCTAAT Trigger: TGTGGCTGCTGTACAGAAGATGGACCCTGATGAGTTCAAGGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGTTAAGCGGGCAGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 72 bp | TGGCACGTATCCAAATTCGCACAAAGCTGTAGGATGTaGTCAATGGCCCCTTGGAGCTTGGTGGCCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WHVSKFAQSCRM*SMAPWSLVAPP Trigger: TGGAGGGGCCACCAAGCTCCAAGGGGCCATTGATCACATCCTACAGCTTTGTGCGAATTTGGATACGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | CAGGCTTTGTGTGCAGTCCTGCAGGATATCGAAGACTaGTATGGAGAAAGGCACCCGGGACCACTTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QALCAVLQDIED*YGERHPGPLFG Trigger: GCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCCTGCAGGACTGCACACAAAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | CCTTCTTCAGCTTCTGTTCTAGGTACCGGCTCAAGATaGTGTTGTAGACGGTGTCCTTGTGGGTGTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSASVLGTGSR*CCRRCPCGCGD Trigger: GTCACCACACCCACAAGGACACCGTCTACAACACCATCTTGAGCCGGTACCTAGAACAGAAGCTGAAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | GCGCCTTTGGCAGAGGTCATACTGCTTGCAGGGCTTTaGGTTATGCATCAGCAGCTGGGAGTAGCAATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: APLAEVILLAGL*VMHQQLGVAIL Trigger: AAGAATTGCTACTCCCAGCTGCTGATGCATAACCCAAAGCCCTGCAAGCAGTATGACCTCTGCCAAAGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | GCCACTAGAAGGCTCAGGATACCATCCCTGAACTCCTaGATCACTTCCTGCTGGTCTTTCTGGGTCATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ATRRLRIPSLNS*ITSCWSFWVMC Trigger: ACACATGACCCAGAAAGACCAGCAGGAAGTGATCCAGGAGTTCAGGGATGGTATCCTGAGCCTTCTAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | GGTATGGAGAAAGGCACCCGGGACCACTTTTTGGCCTaGATCTTCCCTCGAGGTGTTTCCAGTAGTATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GMEKGTRDHFLA*IFPRGVSSSML Trigger: AAGCATACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | AGACTGGTATGGAGAAAGGCACCCGGGACCACTTTTTaGCCTGGATCTTCCCTCGAGGTGTTTCCAGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RLVWRKAPGTTF*PGSSLEVFPVV Trigger: TACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | TTTGTGTGCAGTCCTGCAGGATATCGAAGACTGGTATaGAGAAAGGCACCCGGGACCACTTTTTGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FVCSPAGYRRLV*RKAPGTTFWPG Trigger: TCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCCTGCAGGACTGCACACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | TTCCCAGCACCCGTGGGCAGCCATATAATGATATTCTaGCCCTCCAGAGCAGGTAAGATCACTTCCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPAPVGSHIMIF*PSRAGKITSHW Trigger: CCAGTGGGAAGTGATCTTACCTGCTCTGGAGGGCAAGAATATCATTATATGGCTGCCCACGGGTGCTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | ACTAGAGATGCTTGCTGCAAGTCCCGGATCTTGGCCTaGAACTCATCAGGGTCCATCTTCTGTACAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRDACCKSRILA*NSSGSIFCTAA Trigger: GGCTGCTGTACAGAAGATGGACCCTGATGAGTTCAAGGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | AAGACTGGTATGGAGAAAGGCACCCGGGACCACTTTTaGGCCTGGATCTTCCCTCGAGGTGTTTCCAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: KTGMEKGTRDHF*AWIFPRGVSSS Trigger: ACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | AGGATATCGAAGACTGGTATGGAGAAAGGCACCCGGGACCACTTTTaGGCCTGGATCTTCCCTCGAGGTGTTTCCAGTAGTATGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RISKTGMEKGTRDHF*AWIFPRGVSSSMLP Trigger: CGGAAGCATACTACTGGAAACACCTCGAGGGAAGATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 90 bp | AGCGAGAATTCTCTGAGCTCTACGTGTTCATCCTCCTCAGAGCTGTaGAGTGCCAACTGTAACAACTCTGCCGTACAGATGAGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SENSLSSTCSSSSEL*SANCNNSAVQMSRS Trigger: CGACCTGCTCATCTGTACGGCAGAGTTGTTACAGTTGGCACTCAACAGCTCTGAGGAGGATGAACACGTAGAGCTCAGAGAATTCTCGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS GCA 72 bp | CCAGCCTCTGCCGCATCCTTGCACAACTGTACCACTTaGTGCTCATACATCTGGGTTCCAAATTGTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PASAASLHNCTT*CSYIWVPNCCF Trigger: GAAGCAACAATTTGGAACCCAGATGTATGAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | TCCAGCCTCTGCCGCATCCTTGCACAACTGTACCACTaGCTGCTCATACATCTGGGTTCCAAATTGTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLCRILAQLYH*LLIHLGSKLLL Trigger: AAGCAACAATTTGGAACCCAGATGTATGAGCAGCAAGTGGTACAGTTGTGCAAGGATGCGGCAGAGGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CAA 72 bp | CGCTTAACTAGAGATGCTTGCTGCAAGTCCCGGATCTaGGCCTTGAACTCATCAGGGTCCATCTTCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: RLTRDACCKSRI*ALNSSGSIFCT Trigger: TGTACAGAAGATGGACCCTGATGAGTTCAAGGCCAAGATCCGGGACTTGCAGCAAGCATCTCTAGTTAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS CCA 72 bp | GCAGCCAGCTTTCAGCACGCACCATCTGTGTTTTTGTaGTGCGTTCTCTGTCGTAAAAATCTTGCAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: AASFQHAPSVFL*CVLCRKNLATC Trigger: ACATGTTGCAAGATTTTTACGACAGAGAACGCACCACAAAAACACAGATGGTGCGTGCTGAAAGCTGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||
| CDS TCA 72 bp | TCCCTCGAGGTGTTTCCAGTAGTATGCTTCCGATTTTaGGCACTGGCAAGGTCACTGATTTGTAGATCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLEVFPVVCFRF*ALARSLICRSS Trigger: AGATGATCTACAAATCAGTGACCTTGCCAGTGCTCAAAATCGGAAGCATACTACTGGAAACACCTCGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017974.13 |
||