RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX57 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035051

Ensembl transcript IDs: ENSMUST00000038166.9, ENSMUST00000086555.11

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCGCCGGGGAGCAGAGGTaGAGAGCAGGCGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPAGEQR*RAGGQA
Trigger: GGCCTGGCCGCCTGCTCTGCACCTCTGCTCCCCGGC...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
3UTR GCA 72 bp CAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTaGCTTGCCGGGGAGCAGAGGTGCAGAGCAGGCGGC +
Preference number: 3 (lower is better)
Translates to: QASLPWEVGALL*LAGEQRCRAGG
Trigger: GCCGCCTGCTCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
3UTR-3UTR CAA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGCGCGCTCCTGTGCCTaGCCGGGGAGCAGAGGTGCA +
Preference number: 3 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTARSCA*PGSRGA
Trigger: TGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGC...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
3UTR-3UTR CAA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCGCGCTCCTGTGCCTaGCCGGGGAGCAGAGGTGCA +
Preference number: 3 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHARSCA*PGSRGA
Trigger: TGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGC...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
3UTR-3UTR CAA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGAGACTGTCTCTTGGGTaGTGGGGCCCTGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTRLSLG*WGPGSA
Trigger: TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCT...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
3UTR CCA 72 bp TTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTaGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTG +
Preference number: 3 (lower is better)
Translates to: FRLSYHGRSKLC*ECPHVFRNTSV
Trigger: CACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTTGAGGCCTTTCTACTaGCGCCGCCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPLRPFY*RRLRRR
Trigger: GCGGCGGCGGAGGCGGCGGCAGTAGAAAGGCCTCAA...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGAGACTCCTCCTCGTCCTaGAGATGGAGGGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRDSSSS*RWRDSL
Trigger: GAGGCTGTCCCTCCATCTCCAGGACGAGGAGGAGTC...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGATCCAGGGGCACTCGCTaGATTTCTGGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRSRGTR*ISGSCC
Trigger: GCAGCAGCTCCCAGAAATCCAGCGAGTGCCCCTGGA...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGAATCCTCAGGGCCAGCTaGCAGTGCTCAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRILRAS*QCSVWK
Trigger: CTTCCACACTGAGCACTGTCAGCTGGCCCTGAGGAT...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTCTCCGCAGATGGACTTaGGAGCAAGCGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPLRRWT*EQASLP
Trigger: AGGAAGAGACGCTTGCTCTCAAGTCCATCTGCGGAG...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGGGGGTTGGGTACAGATaGTGTTGGCCACCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGGVGYR*CWPPSR
Trigger: CCGAGAGGGTGGCCAACATCATCTGTACCCAACCCC...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGAGAGATCCGTCGGGGTTaGGTACAGATGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCREIRRG*VQMMLA
Trigger: GGCCAACATCATCTGTACCCAACCCCGACGGATCTC...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTCTCATGAGAATGACCTaGAGGGTCGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPLMRMT*RVALCI
Trigger: GATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAG...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTATGTGGAGGTTCAATaGGCCGAGAGAACACGGACT +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPYVEVQ*AERTRT
Trigger: AGTCCGTGTTCTCTCGGCTCATTGAACCTCCACATA...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGTCCTCGTCCTGGAGATaGAGGGACAGCCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGSSSWR*RDSLRS
Trigger: AGACCTGAGGCTGTCCCTCCATCTCCAGGACGAGGA...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGACCTGCTGCTCTTCGCTaGATAATGATGAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRPAALR*IMMSAA
Trigger: CGCTGCACTCATCATTATCCAGCGAAGAGCAGCAGG...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCGTGGAAGCAGACCCCTaGTGCGACTCGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFVEADP*CDSASS
Trigger: CGAGCTGGCCGAGTCGCATCAGGGGTCTGCTTCCAC...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTGCTTTCACCTTCTCCTaGTTCTCTGATGTCATGTGC +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPAFTFS*FSDVMC
Trigger: GCACATGACATCAGAGAATCAGGAGAAGGTGAAAGC...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGATCCTCCAGGAAAAACTaGTCAACAGGAAATGCACGG +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRSSRKN*STGNAR
Trigger: CCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGA...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGGTGGAAGCAGACCCCTaGTGCGACTCGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWVEADP*CDSASS
Trigger: CGAGCTGGCCGAGTCGCATCAGGGGTCTGCTTCCAC...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGGAACTTCAGCTCAGCTaGCTTTGGCTGCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGELQLS*LWLQSD
Trigger: GTCAGACTGCAGCCAAAGTCAGCTGAGCTGAAGTTC...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTGAGGCCTTTCTACTaGCGCCGCCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSLRPFY*RRLRRR
Trigger: GCGGCGGCGGAGGCGGCGGCAGTAGAAAGGCCTCAA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGCCTCCTCCCCAGAGGTaGCTCTTCTGGACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEPPPQR*LFWTGA
Trigger: AGCGCCCGTCCAGAAGAGGCACCTCTGGGGAGGAGG...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038166.9
CDS-3UTR GCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGGCTCACATAAACAGCTaGCTCAGAGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGAHINS*LRERHP
Trigger: AGGATGGCGCTCTCTGAGGCAGCTGTTTATGTGAGC...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTATTGGTGGAATAAAATaGCACCAGGGGAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPIGGIK*HQGSLV
Trigger: TACCAAGCTCCCCTGGTGGCATTTTATTCCACCAAT...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGAGGCTCTTGTCCAGCTaGCCAGCCCTGCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWRLLSS*PALLLA
Trigger: GGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCT...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGGGATGGTGATGACTaGGCAGTAGCTGAAATACTT +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPWDGDD*AVAEIL
Trigger: AAGTATTTCAGCTACTGCCCAGTCATCACCATCCCA...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTCTTAGTTACACCCATTaGAGGTTTCACAAACACCGC +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPLSYTH*RFHKHR
Trigger: GCGGTGTTTGTGAAACCTCCAATGGGTGTAACTAAG...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTCTGCTGATATCAGCTTaGGGTTCTCAGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPLLISA*GSQHLC
Trigger: ACACAAATGCTGAGAACCCCAAGCTGATATCAGCAG...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGTTATCCTGGAGGAGCTaGTCAAGTTCGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGLSWRS*SSSQRS
Trigger: ACTCCGCTGCGAACTTGACCAGCTCCTCCAGGATAA...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGACCAGTTCCAATCCAATaGTCCAGACTCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRPVPIQ*SRLCSE
Trigger: TTCAGAACAGAGTCTGGACCATTGGATTGGAACTGG...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGACTTATGACAACCACTTaGTGCTTGCTCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRLMTTT*CLLSSF
Trigger: GAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAG...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAGACTCCTCCTCGTCCTaGAGATGGAGGGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSADSSSS*RWRDSL
Trigger: GAGGCTGTCCCTCCATCTCCAGGACGAGGAGGAGTC...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGCTGCACTGCCAAGGGTaGGACTGCACATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQLHCQG*DCTFWH
Trigger: GTGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAG...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGACTTCCTCTAAAAGGGTaGTCAGAGAATAGACAACAG +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRLPLKG*SENRQQ
Trigger: CTGTTGTCTATTCTCTGATCACCCTTTTAGAGGAAG...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGTACCTGGAAAGTTTCTaGACTGCCAAGGGTGAGACT +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGYLESF*TAKGET
Trigger: AGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTA...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGGCTGGCCATTTCCTaGAGGGTTCTCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFRLAIS*RVLPDR
Trigger: CCTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCCT...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAGGCTGGCCATTTCCTaGAGGGTTCTCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQRLAIS*RVLPDR
Trigger: CCTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCCT...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAAGGCTCTTGTCCAGCTaGCCAGCCCTGCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGRLLSS*PALLLA
Trigger: GGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCT...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGACCCAATCATTTGATGTaGGGGCACTTCATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRPNHLM*GHFMFE
Trigger: TTCAAACATGAAGTGCCCCCACATCAAATGATTGGG...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGTCCTCGTCCTGGAGATaGAGGGACAGCCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQSSSWR*RDSLRS
Trigger: AGACCTGAGGCTGTCCCTCCATCTCCAGGACGAGGA...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCGGCGCTTGGGCTCAGTaGAGACACAAAAGTCATCGC +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPGAWAQ*RHKSHR
Trigger: GCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCC...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGCTGCACTGCCAAGGGTaGGACTGCACATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWELHCQG*DCTFWH
Trigger: GTGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAG...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTGTAGTGGTGGCTCGTaGACAAGTGGAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFCSGGS*TSGSRP
Trigger: GGGTCTGCTTCCACTTGTTCACGAGCCACCACTACA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGTGTAGTGGTGGCTCGTaGACAAGTGGAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQCSGGS*TSGSRP
Trigger: GGGTCTGCTTCCACTTGTTCACGAGCCACCACTACA...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGGTCATGTGCAGCGTCTaGAGGGGCACTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQVMCSV*RGTLAL
Trigger: CAAAGCCAAAGTGCCCCTTCAGACGCTGCACATGAC...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGTCTTTCTTGCAGAATTaGGTGGAACTGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGSFLQN*VELSGS
Trigger: GCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGA...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGACCTCCTCCCCAGAGGTaGCTCTTTCGGATCCCGCGT +
Preference number: 4 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGPPPQR*LFRIPR
Trigger: ACGCGGGATCCGAAAGAGGCACCTCTGGGGAGGAGG...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCGGCCACCCTCTCGGGTaGCCCATTCAGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFGHPLG*PIQRII
Trigger: GATAATTCTCTGAATGGGCCACCCGAGAGGGTGGCC...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCTGGCTCGTGAACAAGTaGAAGCAGACCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPWLVNK*KQTPDA
Trigger: CGCATCAGGGGTCTGCTTCCACTTGTTCACGAGCCA...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTCCAGGGGCACTCGCTaGATTTCTGGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSSRGTR*ISGSCC
Trigger: GCAGCAGCTCCCAGAAATCCAGCGAGTGCCCCTGGA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGACACCATCTCCTCCCTaGGCTCGTTTTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGTPSPP*ARFSIS
Trigger: AGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTGT...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCGGCGCTTGGGCTCAGTaGAGACACAAAAGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGGAWAQ*RHKSHR
Trigger: GCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCC...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCCTCCGCAGATGGACTTaGGAGCAAGCGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGLRRWT*EQASLP
Trigger: AGGAAGAGACGCTTGCTCTCAAGTCCATCTGCGGAG...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGATCTGAATTCTTTCTATaGATTTTTCTCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRSEFFL*IFLRRW
Trigger: CCATCTGCGGAGAAAAATTCATAGAAAGAATTCAGA...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAACTTTGGCTGCAGTCTaGCCACTCCAGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSATLAAV*PLQNWS
Trigger: AGACCAGTTCTGGAGTGGTCAGACTGCAGCCAAAGT...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGGGCCACCCTCTCGGGTaGCCCATTCAGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEGHPLG*PIQRII
Trigger: GATAATTCTCTGAATGGGCCACCCGAGAGGGTGGCC...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCTCATGAGAATGACCTaGAGGGTCGCTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPLMRMT*RVALCI
Trigger: GATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAG...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGCACTCGCTGGATTTCTaGGAGCTGCTGCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQHSLDF*ELLLQK
Trigger: CTTCTGAAGCAGCAGCTCCCAGAAATCCAGCGAGTG...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGAGCTGCACGTTCACTTaGCCCCCTCCAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWESCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCT...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGGGGTTGGGTACAGATaGTGTTGGCCACCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCGVGYR*CWPPSR
Trigger: CCGAGAGGGTGGCCAACATCATCTGTACCCAACCCC...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGCCCAGCGTCCAGAGTTaGACTCATGAGAATGACCTG +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEPSVQS*THENDL
Trigger: CAGGTCATTCTCATGAGTGCAACTCTGGACGCTGGG...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGGATTTCTGGGAGCTaGTGCTTCAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEWISGS*CFRSWW
Trigger: CCACCAGCTTCTGAAGCAGCAGCTCCCAGAAATCCA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGATCGCTGTTTGCAAATaGAAACTCCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGIAVCK*KLQLFL
Trigger: CAGAAAAAGCTGGAGTTTGCATTTGCAAACAGCGAT...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTCAGCTGACTTTGGCTaGAGTCTGACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFSADFG*SLTTPE
Trigger: TTCTGGAGTGGTCAGACTGCAGCCAAAGTCAGCTGA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTGTGGAAGCCGTACCTaGAAAGTTTCTGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFCGSRT*KVSALP
Trigger: TGGCAGTGCAGAAACTTTCCAGGTACGGCTTCCACA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGAGATCCGTCGGGGTTaGGTACAGATGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSEIRRG*VQMMLA
Trigger: GGCCAACATCATCTGTACCCAACCCCGACGGATCTC...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCCTGCTGCTCTTCGCTaGATAATGATGAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWPAALR*IMMSAA
Trigger: CGCTGCACTCATCATTATCCAGCGAAGAGCAGCAGG...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCTCCTCCAGGAAAAACTaGTCAACAGGAAATGCACGG +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPSSRKN*STGNAR
Trigger: CCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGA...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCTCACATAAACAGCTaGCTCAGAGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSAHINS*LRERHP
Trigger: AGGATGGCGCTCTCTGAGGCAGCTGTTTATGTGAGC...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCTTGGGACCACTGGTTTaGGGTAGGCAGGTTTACTTA +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPLGPLV*GRQVYL
Trigger: TAAGTAAACCTGCCTACCGCAAACCAGTGGTCCCAA...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGTTCAGCAACAGAGATTaGAGAGATCCGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWFSNRD*RDPSGL
Trigger: CAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAA...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAGCACTCCTGTGGTaGAGTATAACAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSAALLW*SITVWW
Trigger: CCACCAGACTGTTATACTGCACCACAGGAGTGCTGC...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTCAGCTGACTTTGGCTaGAGTCTGACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWESADFG*SLTTPE
Trigger: TTCTGGAGTGGTCAGACTGCAGCCAAAGTCAGCTGA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCTCCATCCCCTTTGCCTaGCTTGCCTTTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPSIPFA*LAFSSY
Trigger: GTAAGAAGAAAAGGCAAGCCAGGCAAAGGGGATGGA...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGGTTACTTGGGACCACTaGTTTGCGGTAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEVTWDH*FAVGRF
Trigger: AAACCTGCCTACCGCAAACCAGTGGTCCCAAGTAAC...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCATCTTGCAGAATTGCGTaGAACTGTCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSASCRIA*NCLEAC
Trigger: ACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGA...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTCTTGCAGAATTGCGTaGAACTGTCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFSCRIA*NCLEAC
Trigger: ACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCAGCAGCACTCCTGTaGTGCAGTATAACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGSAALL*CSITVW
Trigger: CCAGACTGTTATACTGCACCACAGGAGTGCTGCTGA...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGTGGCTCGTGAACAAGTaGAAGCAGACCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWWLVNK*KQTPDA
Trigger: CGCATCAGGGGTCTGCTTCCACTTGTTCACGAGCCA...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTATCCTGGAGGAGCTaGTCAAGTTCGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSLSWRS*SSSQRS
Trigger: ACTCCGCTGCGAACTTGACCAGCTCCTCCAGGATAA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCTCTCCCAATCATTTaGTGTGGGGGCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSALPII*CGGTSC
Trigger: ACATGAAGTGCCCCCACATCAAATGATTGGGAGAGC...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAACTTCAGCTCAGCTaGCTTTGGCTGCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWELQLS*LWLQSD
Trigger: GTCAGACTGCAGCCAAAGTCAGCTGAGCTGAAGTTC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTTCACTGAGGAAGGGTaGATGTGGACATATCCGTCA +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEFTEEG*MWTYPS
Trigger: TGACGGATATGTCCACATTCACCCTTCCTCAGTGAA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGCAGACCCACCCGTTCTaGTCTTTCTTTAGCAACCCG +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWQTHPF*SFFSNP
Trigger: CGGGTTGCTAAAGAAAGAGCAGAACGGGTGGGTCTG...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGGGTAGGCGTGCTTaGCGTCTACAATCCACTCTA +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWEGRRA*RLQSTL
Trigger: TAGAGTGGATTGTAGACGGCAAGCACGCCTACCCTC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGGTAGGTTCTCATTGGTaGAATAAAATGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQVGSHW*NKMPPG
Trigger: CCCTGGTGGCATTTTATTCCACCAATGAGAACCTAC...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCCAGGTTTACTTATTCTaGTCTCGGAAGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFQVYLF*SRKVLE
Trigger: CTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTG...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAGGAAAGTGTTACTTaGGACCACTGGTTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQKESVT*DHWFAV
Trigger: TACCGCAAACCAGTGGTCCCAAGTAACACTTTCCTT...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTCAGCAGCACTCCTGTaGTGCAGTATAACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSSAALL*CSITVW
Trigger: CCAGACTGTTATACTGCACCACAGGAGTGCTGCTGA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTCATCAACAATGATGTaGGTGACTCCCTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFSSTMM*VTPCKV
Trigger: GACTTTGCAGGGAGTCACCCACATCATTGTTGATGA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTCGCAATCTGTTTCATaGAACGCATATATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFSQSVS*NAYMGS
Trigger: GGAGCCCATATATGCGTTCCATGAAACAGATTGCGA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCTGCTGATATCAGCTTaGGGTTCTCAGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPLLISA*GSQHLC
Trigger: ACACAAATGCTGAGAACCCCAAGCTGATATCAGCAG...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTAGCTGCACGTTCACTTaGCCCCCTCCAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCSCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCT...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGGGATCAAGAGCTGCTTaGAATCCAACTGTTGATCAG +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWGSRAA*NPTVDQ
Trigger: CTGATCAACAGTTGGATTTCAAGCAGCTCTTGATCC...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGTCGCAACCGTACTTTTaGGGCACGAAGAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWSQPYF*GTKRIN
Trigger: ATTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGA...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCGCAACCGTACTTTTaGGGCACGAAGAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGSQPYF*GTKRIN
Trigger: ATTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGA...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAACACAAAAGGGGACTTaGAAGCCAAGCTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGTQKGT*KPSWQQ
Trigger: TTGCTGCCAGCTTGGCTTTCAAGTCCCCTTTTGTGT...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTCACTGAGGAAGGGTaGATGTGGACATATCCGTCA +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSFTEEG*MWTYPS
Trigger: TGACGGATATGTCCACATTCACCCTTCCTCAGTGAA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTCTTGCAGAATTaGGTGGAACTGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGSFLQN*VELSGS
Trigger: GCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGA...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGCCGTGTCTCTCCTTTaGTTTTGTTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWAVSLL*FCYCRR
Trigger: CCTGCGACAGTAACAAAAGCAAAGGAGAGACACGGC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGCCCAATCATTTGATGTaGGGGCACTTCATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQPNHLM*GHFMFE
Trigger: TTCAAACATGAAGTGCCCCCACATCAAATGATTGGG...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGGTAGGTTCTCATTGGTaGAATAAAATGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEVGSHW*NKMPPG
Trigger: CCCTGGTGGCATTTTATTCCACCAATGAGAACCTAC...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSAEVGSH*WNKMPP
Trigger: TGGTGGCATTTTATTCCACCAATGAGAACCTACCTC...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGTTACTTGGGACCACTaGTTTGCGGTAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGVTWDH*FAVGRF
Trigger: AAACCTGCCTACCGCAAACCAGTGGTCCCAAGTAAC...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGAAGGAAAGTGTTACTTaGGACCACTGGTTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEKESVT*DHWFAV
Trigger: TACCGCAAACCAGTGGTCCCAAGTAACACTTTCCTT...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGGGATGGTGATGACTaGGCAGTAGCTGAAATACTT +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEWDGDD*AVAEIL
Trigger: AAGTATTTCAGCTACTGCCCAGTCATCACCATCCCA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTCGCAATCTGTTTCATaGAACGCATATATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWESQSVS*NAYMGS
Trigger: GGAGCCCATATATGCGTTCCATGAAACAGATTGCGA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAGGGGCACTTCATGTTTaGATTTGCATTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSAGALHV*ICILIQ
Trigger: TTGGATCAAAATGCAAATTCAAACATGAAGTGCCCC...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCGGGGCACTTCATGTTTaGATTTGCATTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFGALHV*ICILIQ
Trigger: TTGGATCAAAATGCAAATTCAAACATGAAGTGCCCC...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGACAGTCATACCACTTATaGCAACCACTTGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGQSYHL*QPLGAC
Trigger: GCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTG...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGTACCTGGAAAGTTTCTaGACTGCCAAGGGTGAGACT +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWYLESF*TAKGET
Trigger: AGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTA...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGTCATCTGAAACTGCCTaGAGATCTTACTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWSSETA*RSYCSQ
Trigger: CTGAGAACAGTAAGATCTGCAGGCAGTTTCAGATGA...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCAGACCCACCCGTTCTaGTCTTTCTTTAGCAACCCG +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTQTHPF*SFFSNP
Trigger: CGGGTTGCTAAAGAAAGAGCAGAACGGGTGGGTCTG...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGATGGATTTCTGGGAGCTaGTGCTTCAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGWISGS*CFRSWW
Trigger: CCACCAGCTTCTGAAGCAGCAGCTCCCAGAAATCCA...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGTCTCTGAGAAACACTaGCGGAGAAGATGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWVSEKH*RRRCSS
Trigger: ACTAGAGCATCTTCTCCGCCAGTGTTTCTCAGAGAC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTGCGTGGAACTGTCTaGAAGCCTGTTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSLRGTV*KPVSSE
Trigger: TTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAA...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCACTCGCTGGATTTCTaGGAGCTGCTGCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTHSLDF*ELLLQK
Trigger: CTTCTGAAGCAGCAGCTCCCAGAAATCCAGCGAGTG...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAAGAGAATCAATATGTaGAGGTTCAATGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFKRINM*RFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACATATTGATTCTCTT...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTTTTTAATCTTATCCTaGAGGAGCTGGTCAAGTTCG +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFFLILS*RSWSSS
Trigger: CGAACTTGACCAGCTCCTCCAGGATAAGATTAAAAA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCATCTGAATTCTTTCTATaGATTTTTCTCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSASEFFL*IFLRRW
Trigger: CCATCTGCGGAGAAAAATTCATAGAAAGAATTCAGA...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGCTCTCCCAATCATTTaGTGTGGGGGCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTALPII*CGGTSC
Trigger: ACATGAAGTGCCCCCACATCAAATGATTGGGAGAGC...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAACGCTATACTTATGTTaGGTGTGTGTTAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: SETPVWRLSLGLWGPGSATLYLC*VCVSNL
Trigger: CAAGTTACTAACACACACTCAACATAAGTATAGCGT...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGGATCAAGAGCTGCTTaGAATCCAACTGTTGATCAG +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWGSRAA*NPTVDQ
Trigger: CTGATCAACAGTTGGATTTCAAGCAGCTCTTGATCC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGTATGTGGAGGTTCAATaGGCCGAGAGAACACGGACT +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTYVEVQ*AERTRT
Trigger: AGTCCGTGTTCTCTCGGCTCATTGAACCTCCACATA...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGAGACCTGATAGTTCACTaGGGAAGGGTGAATGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGDLIVH*GRVNVD
Trigger: GTCCACATTCACCCTTCCTCAGTGAACTATCAGGTC...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTTTGGGACCACTGGTTTaGGGTAGGCAGGTTTACTTA +
Preference number: 4 (lower is better)
Translates to: SKLCWECPHVFRNTSVETLGPLV*GRQVYL
Trigger: TAAGTAAACCTGCCTACCGCAAACCAGTGGTCCCAA...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACCCCAGCGTCCAGAGTTaGACTCATGAGAATGACCTG +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHPSVQS*THENDL
Trigger: CAGGTCATTCTCATGAGTGCAACTCTGGACGCTGGG...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTTTTGTACTCAGCTaGCAACCCTTATATGCACAT +
Preference number: 4 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGSFVLS*QPLYAH
Trigger: ATGTGCATATAAGGGTTGGCAGCTGAGTACAAAAGA...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCACAGGAAATTCTGTCTaGAGTAATTATAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFTGNSV*SNYSLL
Trigger: GAGCAAGCTATAATTACTGCAGACAGAATTTCCTGT...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTGAGAAACACTaGCGGAGAAGATGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SKLCWECPHVFRNTSVETVSEKH*RRRCSS
Trigger: ACTAGAGCATCTTCTCCGCCAGTGTTTCTCAGAGAC...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACAGTCATACCACTTATaGCAACCACTTGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGQSYHL*QPLGAC
Trigger: GCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTG...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCACTTTGGCTGCAGTCTaGCCACTCCAGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGTLAAV*PLQNWS
Trigger: AGACCAGTTCTGGAGTGGTCAGACTGCAGCCAAAGT...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACTTCAGCAACAGAGATTaGAGAGATCCGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHFSNRD*RDPSGL
Trigger: CAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAA...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCGAGGGTAGGCGTGCTTaGCGTCTACAATCCACTCTA +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGEGRRA*RLQSTL
Trigger: TAGAGTGGATTGTAGACGGCAAGCACGCCTACCCTC...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTATTATAGCTTGCTCGTaGGCTTTCTTTTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSIIACS*AFFCTQ
Trigger: CTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAAT...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTTCATCAACAATGATGTaGGTGACTCCCTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SKLCWECPHVFRNTSVETSSTMM*VTPCKV
Trigger: GACTTTGCAGGGAGTCACCCACATCATTGTTGATGA...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTAAGAGAATCAATATGTaGAGGTTCAATGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSKRINM*RFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACATATTGATTCTCTT...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTCTTCCTCTAAAAGGGTaGTCAGAGAATAGACAACAG +
Preference number: 4 (lower is better)
Translates to: SKLCWECPHVFRNTSVETLPLKG*SENRQQ
Trigger: CTGTTGTCTATTCTCTGATCACCCTTTTAGAGGAAG...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGTCTTCCCAGAATCGATaGCATACACAACATCATCAA +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWSSQNR*HTQHHQ
Trigger: TTGATGATGTTGTGTATGTCATCGATTCTGGGAAGA...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCACACAAAAGGGGACTTaGAAGCCAAGCTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGTQKGT*KPSWQQ
Trigger: TTGCTGCCAGCTTGGCTTTCAAGTCCCCTTTTGTGT...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCGACCTGATAGTTCACTaGGGAAGGGTGAATGTGGAC +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGDLIVH*GRVNVD
Trigger: GTCCACATTCACCCTTCCTCAGTGAACTATCAGGTC...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGATTGGTGGAATAAAATaGCACCAGGGGAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTIGGIK*HQGSLV
Trigger: TACCAAGCTCCCCTGGTGGCATTTTATTCCACCAAT...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGTCTTTTGTACTCAGCTaGCAACCCTTATATGCACAT +
Preference number: 4 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWSFVLS*QPLYAH
Trigger: ATGTGCATATAAGGGTTGGCAGCTGAGTACAAAAGA...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCEVGSH*WNKMPP
Trigger: TGGTGGCATTTTATTCCACCAATGAGAACCTACCTC...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCTTATGACAACCACTTaGTGCTTGCTCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTLMTTT*CLLSSF
Trigger: GAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAG...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCTTAGTTACACCCATTaGAGGTTTCACAAACACCGC +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTLSYTH*RFHKHR
Trigger: GCGGTGTTTGTGAAACCTCCAATGGGTGTAACTAAG...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGACACCATCTCCTCCCTaGGCTCGTTTTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTTPSPP*ARFSIS
Trigger: AGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTGT...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGATCATCTGAAACTGCCTaGAGATCTTACTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGSSETA*RSYCSQ
Trigger: CTGAGAACAGTAAGATCTGCAGGCAGTTTCAGATGA...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTATCGCTGTTTGCAAATaGAAACTCCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SKLCWECPHVFRNTSVETIAVCK*KLQLFL
Trigger: CAGAAAAAGCTGGAGTTTGCATTTGCAAACAGCGAT...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTCCATCCCCTTTGCCTaGCTTGCCTTTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGSIPFA*LAFSSY
Trigger: GTAAGAAGAAAAGGCAAGCCAGGCAAAGGGGATGGA...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACTTGCGTGGAACTGTCTaGAAGCCTGTTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHLRGTV*KPVSSE
Trigger: TTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAA...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGATCTTCCCAGAATCGATaGCATACACAACATCATCAA +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGSSQNR*HTQHHQ
Trigger: TTGATGATGTTGTGTATGTCATCGATTCTGGGAAGA...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGATTATAGCTTGCTCGTaGGCTTTCTTTTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTIIACS*AFFCTQ
Trigger: CTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAAT...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCCAGGTTTACTTATTCTaGTCTCGGAAGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGQVYLF*SRKVLE
Trigger: CTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTG...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGTTTTTAATCTTATCCTaGAGGAGCTGGTCAAGTTCG +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTFLILS*RSWSSS
Trigger: CGAACTTGACCAGCTCCTCCAGGATAAGATTAAAAA...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGATCCCCTTCTAGCATTTaGTTAGAAAGGAAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGSPSSI*LERKVL
Trigger: TAACACTTTCCTTTCTAATCAAATGCTAGAAGGGGA...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACTTCCATTCCTTTGCCTaGGTCGTATCTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHFHSFA*VVSLFF
Trigger: AAAGAAAAGAGATACGACGCAGGCAAAGGAATGGAA...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACACGCTATACTTATGTTaGGTGTGTGTTAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHTLYLC*VCVSNL
Trigger: CAAGTTACTAACACACACTCAACATAAGTATAGCGT...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR TCA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACTCCCCTTCTAGCATTTaGTTAGAAAGGAAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHSPSSI*LERKVL
Trigger: TAACACTTTCCTTTCTAATCAAATGCTAGAAGGGGA...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp AGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGAATTTACGTTTCTTTCTaGTCTCCCAATCATTTGATG +
Preference number: 4 (lower is better)
Translates to: SLVQSQKDKLGFRLSYHGIYVSF*SPNHLM
Trigger: CATCAAATGATTGGGAGAGCAGAAAGAAACGTAAAT...TCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGATTTACGTTTCTTTCTaGTCTCCCAATCATTTGATG +
Preference number: 4 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTIYVSF*SPNHLM
Trigger: CATCAAATGATTGGGAGAGCAGAAAGAAACGTAAAT...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTTCCATTCCTTTGCCTaGGTCGTATCTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGFHSFA*VVSLFF
Trigger: AAAGAAAAGAGATACGACGCAGGCAAAGGAATGGAA...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR GCA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCACAGGAAATTCTGTCTaGAGTAATTATAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGTGNSV*SNYSLL
Trigger: GAGCAAGCTATAATTACTGCAGACAGAATTTCCTGT...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp AAGATAGGCTCTTGTCCAGCTGGCCAGCCCTGCTCCTCGCCACACTaGGGCTCGCTGTCTTCCTCCTCCCCAGAGGTGCCTCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KIGSCPAGQPCSSPH*GSLSSSSPEVPLLD
Trigger: GTCCAGAAGAGGCACCTCTGGGGAGGAGGAAGACAGCGAGCCCCAGTGTGGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCTATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038166.9
CDS CCA 90 bp TGGTCAAGTTCGCAGCGGAGTTCCTTCACCAGCTCGGCCACCTGGTaGGAGGCGGCCACAAACCGGATCCAGCCGTCATCCAAGGAGACG +
Preference number: 5 (lower is better)
Translates to: WSSSQRSSFTSSATW*EAATNRIQPSSKET
Trigger: CGTCTCCTTGGATGACGGCTGGATCCGGTTTGTGGCCGCCTCCCACCAGGTGGCCGAGCTGGTGAAGGAACTCCGCTGCGAACTTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp AGCTGGTCAAGTTCGCAGCGGAGTTCCTTCACCAGCTCGGCCACCTaGTGGGAGGCGGCCACAAACCGGATCCAGCCGTCATCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SWSSSQRSSFTSSAT*WEAATNRIQPSSKE
Trigger: CTCCTTGGATGACGGCTGGATCCGGTTTGTGGCCGCCTCCCACCAGGTGGCCGAGCTGGTGAAGGAACTCCGCTGCGAACTTGACCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp CTGCAGTCAGGAAGAAAGATAGGCTCTTGTCCAGCTGGCCAGCCCTaGTCCTCGCCACACTGGGGCTCGCTGTCTTCCTCCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQSGRKIGSCPAGQP*SSPHWGSLSSSSPE
Trigger: CTCTGGGGAGGAGGAAGACAGCGAGCCCCAGTGTGGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCTATCTTTCTTCCTGACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp AAGATAGGCTCTTGTCCAGCTGGCCAGCCCTGCTCCTCGCCACACTaGGGCTCGCTGTCTTCCTCCTCCCCAGAGGTGCCTCTTTCGGAT +
Preference number: 5 (lower is better)
Translates to: KIGSCPAGQPCSSPH*GSLSSSSPEVPLSD
Trigger: ATCCGAAAGAGGCACCTCTGGGGAGGAGGAAGACAGCGAGCCCCAGTGTGGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCTATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTCAGCAGTTCAGTGAATaGTCGTTTGAGGCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPQQFSE*SFEAGH
Trigger: ATGGCCAGCCTCAAACGACAATTCACTGAACTGCTG...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp CTGGGAGCTGCTGCTTCAGAAGCTGGTGGTTGTAGTGGTGGCTCGTaGACAAGTGGAAGCAGACCCCTGATGCGACTCGGCCAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: LGAAASEAGGCSGGS*TSGSRPLMRLGQLG
Trigger: GCCGAGCTGGCCGAGTCGCATCAGGGGTCTGCTTCCACTTGTTCACGAGCCACCACTACAACCACCAGCTTCTGAAGCAGCAGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp AAAAGTCATCGCCATCATCCCAAATTCTATTTGAGGCCTTTCTACTaGCGCCGCCTCCGCCGCCGCAGCTACCGCCGCCGCCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: KSHRHHPKFYLRPFY*RRLRRRSYRRRHLH
Trigger: GTGGAGGTGGCGGCGGCGGTAGCTGCGGCGGCGGAGGCGGCGGCAGTAGAAAGGCCTCAAATAGAATTTGGGATGATGGCGATGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTTGCCGGGGAGCAGAGGTGCAGATCAGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LPWEVGALLCLAGEQRCRSVNCR*RLAISC
Trigger: GCAGGAAATGGCCAGCCTCAAACGACAATTCACTGA...TCTGCACCTCTGCTCCCCGGCAAGGCACAGGAGCGCGCCTACCTCCCACGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTACTGCTGATATCAGCTaGGGGTTCTCAGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPTADIS*GFSAFV
Trigger: CACAAATGCTGAGAACCCCAAGCTGATATCAGCAGT...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CCAGGGGCAGCCCCAAGCCAGTCTTCCGTGGGAGGTAGGCGCGCTCCTGTGCCTATCACAGACATTGTCTaGATGACTGACTTGCTCACC +
Preference number: 5 (lower is better)
Translates to: PGAAPSQSSVGGRRAPVPITDIV*MTDLLT
Trigger: GGTGAGCAAGTCAGTCATCAAGACAATGTCTGTGAT...AGGCACAGGAGCGCGCCTACCTCCCACGGAAGACTGGCTTGGGGCTGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp GATGCGACTCGGCCAGCTCGGCCTTTCCTCTGCAGAGCGTTGGCCTaGGACACGAACGTGTCCTCTAGACTTTCCATTCCTTTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: DATRPARPFLCRALA*DTNVSSRLSIPLPA
Trigger: CGCAGGCAAAGGAATGGAAAGTCTAGAGGACACGTTCGTGTCTCAGGCCAACGCTCTGCAGAGGAAAGGCCGAGCTGGCCGAGTCGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp CCCCTGATGCGACTCGGCCAGCTCGGCCTTTCCTCTGCAGAGCGTTaGCCTGAGACACGAACGTGTCCTCTAGACTTTCCATTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PLMRLGQLGLSSAER*PETRTCPLDFPFLC
Trigger: GCAAAGGAATGGAAAGTCTAGAGGACACGTTCGTGTCTCAGGCCAACGCTCTGCAGAGGAAAGGCCGAGCTGGCCGAGTCGCATCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGTGGGTACAGATGATGTaGGCCACCCTCTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQWVQMM*ATLSGG
Trigger: GCCACCCGAGAGGGTGGCCAACATCATCTGTACCCA...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp ACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCACCCCAGGGCAGCAGTTCAGTGAATaGTCGTTTGAGGCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: TSVETVSWVVGPWLCTPGQQFSE*SFEAGH
Trigger: ATGGCCAGCCTCAAACGACAATTCACTGAACTGCTG...CCCTGGGGTGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp CTCAGTGTGGAAGCCGTACCTGGAAAGTTTCTGCACTGCCAAGGGTaGGACTGCACATTCTGGCACAGGAGGCTCCACTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LSVEAVPGKFLHCQG*DCTFWHRRLHFFWA
Trigger: GGCCCAGAAGAAGTGGAGCCTCCTGTGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTACGGCTTCCACACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp GCCATCCTCTCTCCAAACGTCTCTGAGAAACACTGGCGGAGAAGATaGTCTAGTGCCGCCCCTAAGTCTCCATCACAGATCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AILSPNVSEKHWRRR*SSAAPKSPSQILRA
Trigger: GGCCCTGAGGATCTGTGATGGAGACTTAGGGGCGGCACTAGAGCATCTTCTCCGCCAGTGTTTCTCAGAGACGTTTGGAGAGAGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp GCCTCAGAGAGCGCCATCCTCTCTCCAAACGTCTCTGAGAAACACTaGCGGAGAAGATGCTCTAGTGCCGCCCCTAAGTCTCCATCACAG +
Preference number: 5 (lower is better)
Translates to: ASESAILSPNVSEKH*RRRCSSAAPKSPSQ
Trigger: CTGTGATGGAGACTTAGGGGCGGCACTAGAGCATCTTCTCCGCCAGTGTTTCTCAGAGACGTTTGGAGAGAGGATGGCGCTCTCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp CTGCACAGGTCCATGCTGGGGTTTTTAATCTTATCCTGGAGGAGCTaGTCAAGTTCGCAGCGGAGTTCCTTCACCAGCTCGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LHRSMLGFLILSWRS*SSSQRSSFTSSATW
Trigger: CCAGGTGGCCGAGCTGGTGAAGGAACTCCGCTGCGAACTTGACCAGCTCCTCCAGGATAAGATTAAAAACCCCAGCATGGACCTGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAGATCCGTCGGGGTaGGGTACAGATGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFRDPSG*GTDDVG
Trigger: GCCAACATCATCTGTACCCAACCCCGACGGATCTCT...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCAAGCTGCACGTTCACTaGGCCCCCTCCAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPKLHVH*APSKQD
Trigger: GTCTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCTT...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAAAGCTGCACGTTCACTaGGCCCCCTCCAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: SETPVWRLSLGLWGPGSAKLHVH*APSKQD
Trigger: GTCTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCTT...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGAGGGGCACTTTGGCTTaGGGCTTCCACTTAGGCCGT +
Preference number: 5 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWRGTLA*GFHLGR
Trigger: ACGGCCTAAGTGGAAGCCCAAAGCCAAAGTGCCCCT...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS TCA 90 bp TCTAGTGCCGCCCCTAAGTCTCCATCACAGATCCTCAGGGCCAGCTaGCAGTGCTCAGTGTGGAAGCCGTACCTGGAAAGTTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: SSAAPKSPSQILRAS*QCSVWKPYLESFCT
Trigger: AGTGCAGAAACTTTCCAGGTACGGCTTCCACACTGAGCACTGTCAGCTGGCCCTGAGGATCTGTGATGGAGACTTAGGGGCGGCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp AGATCCTCAGGGCCAGCTGACAGTGCTCAGTGTGGAAGCCGTACCTaGAAAGTTTCTGCACTGCCAAGGGTGAGACTGCACATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: RSSGPADSAQCGSRT*KVSALPRVRLHILA
Trigger: TGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTACGGCTTCCACACTGAGCACTGTCAGCTGGCCCTGAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp TTAGCAACCCGTTCAGCAACAGAGATTGCAGAGATCCGTCGGGGTTaGGTACAGATGATGTTGGCCACCCTCTCGGGTGGCCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: LATRSATEIAEIRRG*VQMMLATLSGGPFR
Trigger: TCTGAATGGGCCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAACGGGTTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp CTCGGACAGCTGCACAGGTCCATGCTGGGGTTTTTAATCTTATCCTaGAGGAGCTGGTCAAGTTCGCAGCGGAGTTCCTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LGQLHRSMLGFLILS*RSWSSSQRSSFTSS
Trigger: CGAGCTGGTGAAGGAACTCCGCTGCGAACTTGACCAGCTCCTCCAGGATAAGATTAAAAACCCCAGCATGGACCTGTGCAGCTGTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGTGGGTACAGATGATGTaGGCCACCCTCTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWWVQMM*ATLSGG
Trigger: GCCACCCGAGAGGGTGGCCAACATCATCTGTACCCA...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp CCTCCTCCCCAGAGGTGCCTCTTCTGGACGGGCGCTTGGGCTCAGTaGAGACACAAAAGTCATCGCCATCATCCCAAATTCTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: PPPQRCLFWTGAWAQ*RHKSHRHHPKFYLR
Trigger: CCTCAAATAGAATTTGGGATGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCCAGAAGAGGCACCTCTGGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038166.9
CDS-3UTR CAA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCTGCTCTCCCAATCATTaGATGTGGGGGCACTTCATG +
Preference number: 5 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFCSPNH*MWGHFM
Trigger: CATGAAGTGCCCCCACATCAAATGATTGGGAGAGCA...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGATGCCACCAGGGGAGCTaGGTAGGGGTATTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGCHQGS*VGVFVV
Trigger: GACCACAAATACCCCTACCAAGCTCCCCTGGTGGCA...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTAGAGATCCGTCGGGGTaGGGTACAGATGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSRDPSG*GTDDVG
Trigger: GCCAACATCATCTGTACCCAACCCCGACGGATCTCT...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp CTGGAGATGGAGGGACAGCCTCAGGTCTTCCTCTACCTCCTCCTGTaGAGTTCTGTTGTGCCTGGCTTTAAGCTTTTCCTTCGCAATCTG +
Preference number: 5 (lower is better)
Translates to: LEMEGQPQVFLYLLL*SSVVPGFKLFLRNL
Trigger: CAGATTGCGAAGGAAAAGCTTAAAGCCAGGCACAACAGAACTGCACAGGAGGAGGTAGAGGAAGACCTGAGGCTGTCCCTCCATCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp GCCCTGGTAAGAACACAAGGACAGCGCCTGGAGGGTAGGCGTGCTTaGCGTCTACAATCCACTCTAACAAGGCCTCTATTAGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: ALVRTQGQRLEGRRA*RLQSTLTRPLLVQG
Trigger: ACCTTGAACTAATAGAGGCCTTGTTAGAGTGGATTGTAGACGGCAAGCACGCCTACCCTCCAGGCGCTGTCCTTGTGTTCTTACCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGTCCCCTTTGCCTGGCTaGCCTTTTCTTCTTACTGAA +
Preference number: 5 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQSPLPG*PFLLTE
Trigger: TTCAGTAAGAAGAAAAGGCAAGCCAGGCAAAGGGGA...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGCATCCCAAATTCTATTaGAGGCCTTTCTACTGCCGC +
Preference number: 5 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQHPKFY*RPFYCR
Trigger: GCGGCAGTAGAAAGGCCTCAAATAGAATTTGGGATG...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGCAGTCTTTCTTGCAGAATaGCGTGGAACTGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SETPVWRLSLGLWGPGSAVFLAE*RGTVWK
Trigger: CTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGAC...TGCAGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCTCTGTTCAGCAACAGAGATaGCAGAGATCCGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: FSETPVWRLSLGLWGPGSVQQQR*QRSVGV
Trigger: AACCCCGACGGATCTCTGCAATCTCTGTTGCTGAAC...AGAGCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGCTCGCAACCGTACTTTaGAGGCACGAAGAGAATCAA +
Preference number: 5 (lower is better)
Translates to: AVLPRTLQIVLGVSPRFQLATVL*RHEENQ
Trigger: TTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGAG...CTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCTCGCAACCGTACTTTaGAGGCACGAAGAGAATCAA +
Preference number: 5 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPLATVL*RHEENQ
Trigger: TTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGAG...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp TTCCTGCAGATCCCTCAGAAGGGCTTTCACCTTCTCCTGATTCTCTaGTGTCATGTGCAGCGTCTGAAGGGGCACTTTGGCTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: FLQIPQKGFHLLLIL*CHVQRLKGHFGFGL
Trigger: AAGCCCAAAGCCAAAGTGCCCCTTCAGACGCTGCACATGACATCAGAGAATCAGGAGAAGGTGAAAGCCCTTCTGAGGGATCTGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS GCA 90 bp CGTCACAGCCAGCGCATCCTCCAGGAAAAACTGATCAACAGGAAATaGACGGCCTGGGATGGTGATGACTGGGCAGTAGCTGAAATACTT +
Preference number: 5 (lower is better)
Translates to: RHSQRILQEKLINRK*TAWDGDDWAVAEIL
Trigger: AAGTATTTCAGCTACTGCCCAGTCATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGATGCGCTGGCTGTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp GATCCGTCGGGGTTGGGTACAGATGATGTTGGCCACCCTCTCGGGTaGCCCATTCAGAGAATTATCCAGGATAAACTGTGGAATCTGTGT +
Preference number: 5 (lower is better)
Translates to: DPSGLGTDDVGHPLG*PIQRIIQDKLWNLC
Trigger: ACACAGATTCCACAGTTTATCCTGGATAATTCTCTGAATGGGCCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCCCGACGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGGTCTTTCTTGCAGAATaGCGTGGAACTGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWEVFLAE*RGTVWK
Trigger: CTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGAC...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGACAACCACTTGGTGCTaGCTCAGCAGTTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWETTTWC*LSSFRM
Trigger: CATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGT...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTCCTGTGCAGTTCTGTaGTGCCTGGCTTTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWESCAVL*CLALSF
Trigger: AAAGCTTAAAGCCAGGCACAACAGAACTGCACAGGA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp AGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCATCACAGACATTGTCTaGATGACTGACTTGCTCACC +
Preference number: 5 (lower is better)
Translates to: RLSYHGRSKLCWECPHVFITDIV*MTDLLT
Trigger: GGTGAGCAAGTCAGTCATCAAGACAATGTCTGTGAT...GAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGTCTCTCCTTTGCTTTaGTTACTGTCGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWVSPLL*LLSQGL
Trigger: CAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGAC...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS TCA 90 bp CTTGACCTGTACTACGTTTGGATACAGAGCGGCACACAGCACTGCTaGTATCAGCTTGGGGTTCTCAGCATTTGTGTTAGCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LDLYYVWIQSGTQHC*YQLGVLSICVSLLS
Trigger: GGAGAGGAGGCTAACACAAATGCTGAGAACCCCAAGCTGATATCAGCAGTGCTGTGTGCCGCTCTGTATCCAAACGTAGTACAGGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp TGCTTTTGTTACTGTCGCAGGGCCTGGACGGGCGCTTGGGCTCAGTaGAGACACAAAAGTCATCGCCATCATCCCAAATTCTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: CFCYCRRAWTGAWAQ*RHKSHRHHPKFYLR
Trigger: CCTCAAATAGAATTTGGGATGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CCA 90 bp TGTTACTTGGGACCACTGGTTTGCGGTAGGCAGGTTTACTTATTCTaGTCTCGGAAGGTACTGGAGGGACGTTCACAGGAGGAACGCTAT +
Preference number: 5 (lower is better)
Translates to: CYLGPLVCGRQVYLF*SRKVLEGRSQEERY
Trigger: ATAGCGTTCCTCCTGTGAACGTCCCTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTGCCTACCGCAAACCAGTGGTCCCAAGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp TTGGAGAACAGCCCAGCGTCCAGAGTTGCACTCATGAGAATGACCTaGAGGGTCGCTCTCTGCATCACAATGTCCTTCAAAACTAGCAGT +
Preference number: 5 (lower is better)
Translates to: LENSPASRVALMRMT*RVALCITMSFKTSS
Trigger: ACTGCTAGTTTTGAAGGACATTGTGATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAGTGCAACTCTGGACGCTGGGCTGTTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp GAAAAACTGATCAACAGGAAATGCACGGCCTGGGATGGTGATGACTaGGCAGTAGCTGAAATACTTGGAGAACAGCCCAGCGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: EKLINRKCTAWDGDD*AVAEILGEQPSVQS
Trigger: ACTCTGGACGCTGGGCTGTTCTCCAAGTATTTCAGCTACTGCCCAGTCATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp CAGCGCATCCTCCAGGAAAAACTGATCAACAGGAAATGCACGGCCTaGGATGGTGATGACTGGGCAGTAGCTGAAATACTTGGAGAACAG +
Preference number: 5 (lower is better)
Translates to: QRILQEKLINRKCTA*DGDDWAVAEILGEQ
Trigger: CTGTTCTCCAAGTATTTCAGCTACTGCCCAGTCATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGATGCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp TTACACCCATTGGAGGTTTCACAAACACCGCCTGCTGCTCTTCGCTaGATAATGATGAGTGCAGCGGGTGAATTACACATCGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: LHPLEVSQTPPAALR*IMMSAAGELHIGDC
Trigger: GCAGTCACCGATGTGTAATTCACCCGCTGCACTCATCATTATCCAGCGAAGAGCAGCAGGCGGTGTTTGTGAAACCTCCAATGGGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCCAGGTTCTGAAGTTTTaGCAAATTCCAAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGQVLKF*QIPRPC
Trigger: GCAAGGCCTTGGAATTTGCAAAAACTTCAGAACCTG...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGACTTATGACAACCACTaGGTGCTTGCTCAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: HVFRNTSVETVSWVVGPWTYDNH*VLAQQF
Trigger: AAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGT...CCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTCTCGTGCGCTTTCTTTaGTACTCAGCTGCCAACCCT +
Preference number: 5 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCLVRFL*YSAANP
Trigger: AGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAG...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGTCCCTGCAGTAATTATAGCTaGCTCGTGCGCTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: LGFRLSYHGRSKLCWECPCSNYS*LVRFLL
Trigger: CAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCA...GGGACACTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp ACGCTCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGATCAGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: TLQIVLGVSPRFQKHQCGSVNCR*RLAISC
Trigger: GCAGGAAATGGCCAGCCTCAAACGACAATTCACTGA...TCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp ACTTTCCAGCCGAATCTGGTATCCCACAGTCAGACCCACCCGTTCTaGTCTTTCTTTAGCAACCCGTTCAGCAACAGAGATTGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: TFQPNLVSHSQTHPF*SFFSNPFSNRDCRD
Trigger: ATCTCTGCAATCTCTGTTGCTGAACGGGTTGCTAAAGAAAGAGCAGAACGGGTGGGTCTGACTGTGGGATACCAGATTCGGCTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGCCACCAGGGGAGCTaGGTAGGGGTATTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGCHQGS*VGVFVV
Trigger: GACCACAAATACCCCTACCAAGCTCCCCTGGTGGCA...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp ACGTTTTCAGAAACACCAGTGTGGAGACTGTCTCTTGGGTTGTGGGGCCCTGGCGTGTGTGTTAGTAACTaGACAATCTCTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: TFSETPVWRLSLGLWGPGVCVSN*TISDSS
Trigger: GGAAGAGTCAGAGATTGTCAAGTTACTAACACACAC...GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp AAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGACAACCACTTGGTGCTaGCTCAGCAGTTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: KDKLGFRLSYHGRSKLCWTTTWC*LSSFRM
Trigger: CATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGT...CCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGCTGGGAGTGCAGTAATTATAGCTaGCTCGTGCGCTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: DKLGFRLSYHGRSKLCWECSNYS*LVRFLL
Trigger: CAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCA...CTCCCAGCACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp GGCTGGCCATTTCCTGCAGGGTTCTCCCAGACAGGAAATTCTGTCTaGAGTAATTATAGCTTGCTCGTGCGCTTTCTTTTGTACTCAGCT +
Preference number: 5 (lower is better)
Translates to: GWPFPAGFSQTGNSV*SNYSLLVRFLLYSA
Trigger: AGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp ATCCAGGACACCATCTCCTCCCTGGGCTCGTTTTTCAATTTCTTTTaGTCGGAGTCCTTCTTTCACAAACCCTATGTCGGACAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IQDTISSLGSFFNFF*SESFFHKPYVGQQF
Trigger: GAACTGCTGTCCGACATAGGGTTTGTGAAAGAAGGACTCCGAGCAAAAGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTGTCCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp TATCCGTCATTCTTGGTAACGAACTTCAGCTCAGCTGACTTTGGCTaGAGTCTGACCACTCCAGAACTGGTCTTCTGGAACTTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: YPSFLVTNFSSADFG*SLTTPELVFWNFPS
Trigger: AGAGGGAAAGTTCCAGAAGACCAGTTCTGGAGTGGTCAGACTGCAGCCAAAGTCAGCTGAGCTGAAGTTCGTTACCAAGAATGACGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp TGGTTTGCGGTAGGCAGGTTTACTTATTCTGGTCTCGGAAGGTACTaGAGGGACGTTCACAGGAGGAACGCTATACTTATGTTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: WFAVGRFTYSGLGRY*RDVHRRNAILMLSV
Trigger: CACACTCAACATAAGTATAGCGTTCCTCCTGTGAACGTCCCTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTGCCTACCGCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTTCCCCTTTGCCTGGCTaGCCTTTTCTTCTTACTGAA +
Preference number: 5 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCSPLPG*PFLLTE
Trigger: TTCAGTAAGAAGAAAAGGCAAGCCAGGCAAAGGGGA...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTCATCCCAAATTCTATTaGAGGCCTTTCTACTGCCGC +
Preference number: 5 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCHPKFY*RPFYCR
Trigger: GCGGCAGTAGAAAGGCCTCAAATAGAATTTGGGATG...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGTGCTCTCCCAATCATTaGATGTGGGGGCACTTCATG +
Preference number: 5 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTCSPNH*MWGHFM
Trigger: CATGAAGTGCCCCCACATCAAATGATTGGGAGAGCA...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TCCAAATTGTGCTGGGAGTGTCCCCACGTTTTCAGAAACACCAGTGTGGAGACTTCCTGTGCAGTTCTGTaGTGCCTGGCTTTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SKLCWECPHVFRNTSVETSCAVL*CLALSF
Trigger: AAAGCTTAAAGCCAGGCACAACAGAACTGCACAGGA...AGTCTCCACACTGGTGTTTCTGAAAACGTGGGGACACTCCCAGCACAATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACCTCGTGCGCTTTCTTTaGTACTCAGCTGCCAACCCT +
Preference number: 5 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHLVRFL*YSAANP
Trigger: AGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAG...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGCCGTGTCTCTCCTTaGCTTTTGTTACTGTCGCAG +
Preference number: 5 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHGRVSP*LLLLSQ
Trigger: CTGCGACAGTAACAAAAGCAAAGGAGAGACACGGCC...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS GCA 90 bp GAATTGCGTGGAACTGTCTGGAAGCCTGTTTCATCTGAAACTGCCTaGAGATCTTACTGTTCTCAGCAAATAAGGACTTTGCCGGCCTGT +
Preference number: 5 (lower is better)
Translates to: ELRGTVWKPVSSETA*RSYCSQQIRTLPAC
Trigger: ACAGGCCGGCAAAGTCCTTATTTGCTGAGAACAGTAAGATCTGCAGGCAGTTTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp GTGGTTTTCCCACATCCAGTCATACCACTTATGACAACCACTTGGTaGTTGCTCAGCAGTTTCAGAATGGTCTCTCTCTCTTCCCAAGCA +
Preference number: 5 (lower is better)
Translates to: VVFPHPVIPLMTTTW*LLSSFRMVSLSSQA
Trigger: TGCTTGGGAAGAGAGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp GCGTCCAGAGTTGCACTCATGAGAATGACCTGGAGGGTCGCTCTCTaGATCACAATGTCCTTCAAAACTAGCAGTAAGAAGTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: ASRVALMRMTWRVAL*ITMSFKTSSKKSLS
Trigger: AGAAAGTGACTTCTTACTGCTAGTTTTGAAGGACATTGTGATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAGTGCAACTCTGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp TTTTTCATCTGGAGTCAAGGCTCCCAAGTCTCGCAACCGTACTTTTaGGGCACGAAGAGAATCAATATGTGGAGGTTCAATGAGCCGAGA +
Preference number: 5 (lower is better)
Translates to: FFIWSQGSQVSQPYF*GTKRINMWRFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACATATTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGAGACTTGGGAGCCTTGACTCCAGATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp CAGGGTTCTCCCAGACAGGAAATTCTGTCTGCAGTAATTATAGCTTaGTCGTGCGCTTTCTTTTGTACTCAGCTGCCAACCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: QGSPRQEILSAVIIA*SCAFFCTQLPTLIC
Trigger: GCATATAAGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTGTCTGGGAGAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGCAGGTTCTGAAGTTTTaGCAAATTCCAAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SVWYSHRKTSWVLGCPTTQVLKF*QIPRPC
Trigger: GCAAGGCCTTGGAATTTGCAAAAACTTCAGAACCTG...CGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 90 bp AAGCAGGCAGTAACTGTCTTTCTTGCAGAATTGCGTGGAACTGTCTaGAAGCCTGTTTCATCTGAAACTGCCTGCAGATCTTACTGTTCT +
Preference number: 5 (lower is better)
Translates to: KQAVTVFLAELRGTV*KPVSSETACRSYCS
Trigger: AGAACAGTAAGATCTGCAGGCAGTTTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGACAGTTACTGCCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp CACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACGGACGCTCCAAATTGTGTGTCCCGTACATTTTaGCTACTTTCCTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: HRKTSWVLGCPTTDAPNCVSRTF*LLSFCL
Trigger: TAAGCAAAAGGAAAGTAGCAAAAATGTACGGGACAC...ACAATTTGGAGCGTCCGTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp TTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCTGTCCTACCACACTTATGACAACCACTaGGTGCTTGCTCAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: FSLVQSQKDKLGFRLSYHTYDNH*VLAQQF
Trigger: AAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGT...GTGGTAGGACAGCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS-3UTR CAA 90 bp GGTGAATTGCATTCAGTTTGGTACAGTCACAGAAAGACAAGCTGGGTTTTAGGCACTGCTGATATCAGCTaGGGGTTCTCAGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: GELHSVWYSHRKTSWVLGTADIS*GFSAFV
Trigger: CACAAATGCTGAGAACCCCAAGCTGATATCAGCAGT...GCCTAAAACCCAGCTTGTCTTTCTGTGACTGTACCAAACTGAATGCAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 90 bp TGTGTCGTCATCAGCGTCAAGGTGAGGGTCATTTACGTTTCTTTCTaGTCTCCCAATCATTTGATGTGGGGGCACTTCATGTTTGAATTT +
Preference number: 5 (lower is better)
Translates to: CVVISVKVRVIYVSF*SPNHLMWGHFMFEF
Trigger: AAATTCAAACATGAAGTGCCCCCACATCAAATGATTGGGAGAGCAGAAAGAAACGTAAATGACCCTCACCTTGACGCTGATGACGACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 90 bp CTTTCTTGCAGAATTGCGTGGAACTGTCTGGAAGCCTGTTTCATCTaGAACTGCCTGCAGATCTTACTGTTCTCAGCAAATAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: LSCRIAWNCLEACFI*NCLQILLFSANKDF
Trigger: AAAGTCCTTATTTGCTGAGAACAGTAAGATCTGCAGGCAGTTTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CGCCATCATCCCAAATTCTATTTGAGGCCTTTCTACTaGCGCCGCCTCCGCCGCCGCAGCTACCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RHHPKFYLRPFY*RRLRRRSYRRR
Trigger: GCGGCGGCGGTAGCTGCGGCGGCGGAGGCGGCGGCAGTAGAAAGGCCTCAAATAGAATTTGGGATGATGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp GGAAGAAAGATAGGCTCTTGTCCAGCTGGCCAGCCCTaGTCCTCGCCACACTGGGGCTCGCTGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRKIGSCPAGQP*SSPHWGSLSSS
Trigger: GGAGGAAGACAGCGAGCCCCAGTGTGGCGAGGAGCAGGGCTGGCCAGCTGGACAAGAGCCTATCTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CGACTCGGCCAGCTCGGCCTTTCCTCTGCAGAGCGTTaGCCTGAGACACGAACGTGTCCTCTAGACTTTCCA +
Preference number: 6 (lower is better)
Translates to: RLGQLGLSSAER*PETRTCPLDFP
Trigger: TGGAAAGTCTAGAGGACACGTTCGTGTCTCAGGCCAACGCTCTGCAGAGGAAAGGCCGAGCTGGCCGAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GAGGCACAGCTGCTCCAGGGGCACTCGCTGGATTTCTaGGAGCTGCTGCTTCAGAAGCTGGTGGTTGTAGTG +
Preference number: 6 (lower is better)
Translates to: EAQLLQGHSLDF*ELLLQKLVVVV
Trigger: CACTACAACCACCAGCTTCTGAAGCAGCAGCTCCCAGAAATCCAGCGAGTGCCCCTGGAGCAGCTGTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TTGGGCTTCCACTTAGGCCGTGTCTCTCCTTTGCTTTaGTTACTGTCGCAGGGCCTGGACGGGCGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LGFHLGRVSPLL*LLSQGLDGRLG
Trigger: GCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGACACGGCCTAAGTGGAAGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CAA 90 bp AAACCGGATCCAGCCGTCATCCAAGGAGACGACGAACGCCCCTCTTaGAAGCTGCACGTTCACTTGGCCCCCTCCAAACAAGACCAGGGG +
Preference number: 6 (lower is better)
Translates to: KPDPAVIQGDDERPS*KLHVHLAPSKQDQG
Trigger: CCCCTGGTCTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCTTCAAAGAGGGGCGTTCGTCGTCTCCTTGGATGACGGCTGGATCCGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp AGGGGCACTTTGGCTTTGGGCTTCCACTTAGGCCGTGTCTCTCCTTaGCTTTTGTTACTGTCGCAGGGCCTGGACGGGCGCTTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: RGTLALGFHLGRVSP*LLLLSQGLDGRLGS
Trigger: TGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGACACGGCCTAAGTGGAAGCCCAAAGCCAAAGTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS TCA 72 bp CGGCCAGCTCGGCCTTTCCTCTGCAGAGCGTTGGCCTaGGACACGAACGTGTCCTCTAGACTTTCCATTCCT +
Preference number: 6 (lower is better)
Translates to: RPARPFLCRALA*DTNVSSRLSIP
Trigger: AGGAATGGAAAGTCTAGAGGACACGTTCGTGTCTCAGGCCAACGCTCTGCAGAGGAAAGGCCGAGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp CAGCCGTCATCCAAGGAGACGACGAACGCCCCTCTTTaGAGCTGCACGTTCACTTGGCCCCCTCCAAACAAG +
Preference number: 6 (lower is better)
Translates to: QPSSKETTNAPL*SCTFTWPPPNK
Trigger: CTTGTTTGGAGGGGGCCAAGTGAACGTGCAGCTTCAAAGAGGGGCGTTCGTCGTCTCCTTGGATGACGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GGGCCAGCTGACAGTGCTCAGTGTGGAAGCCGTACCTaGAAAGTTTCTGCACTGCCAAGGGTGAGACTGCAC +
Preference number: 6 (lower is better)
Translates to: GPADSAQCGSRT*KVSALPRVRLH
Trigger: GTGCAGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTACGGCTTCCACACTGAGCACTGTCAGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CGTTCAGCAACAGAGATTGCAGAGATCCGTCGGGGTTaGGTACAGATGATGTTGGCCACCCTCTCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RSATEIAEIRRG*VQMMLATLSGG
Trigger: GCCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CCGTTCAGCAACAGAGATTGCAGAGATCCGTCGGGGTaGGGTACAGATGATGTTGGCCACCCTCTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: PFSNRDCRDPSG*GTDDVGHPLGW
Trigger: CCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CCAGCCGTCATCCAAGGAGACGACGAACGCCCCTCTTaGAAGCTGCACGTTCACTTGGCCCCCTCCAAACAA +
Preference number: 6 (lower is better)
Translates to: PAVIQGDDERPS*KLHVHLAPSKQ
Trigger: TTGTTTGGAGGGGGCCAAGTGAACGTGCAGCTTCAAAGAGGGGCGTTCGTCGTCTCCTTGGATGACGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TTGGCTTTGGGCTTCCACTTAGGCCGTGTCTCTCCTTaGCTTTTGTTACTGTCGCAGGGCCTGGACGGGCGC +
Preference number: 6 (lower is better)
Translates to: LALGFHLGRVSP*LLLLSQGLDGR
Trigger: GCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGACACGGCCTAAGTGGAAGCCCAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CAA 90 bp ACTTTGGCTTTGGGCTTCCACTTAGGCCGTGTCTCTCCTTTGCTTTaGTTACTGTCGCAGGGCCTGGACGGGCGCTTGGGCTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: TLALGFHLGRVSPLL*LLSQGLDGRLGSVK
Trigger: CTTCACTGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGACACGGCCTAAGTGGAAGCCCAAAGCCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS TCA 72 bp GCCCCTAAGTCTCCATCACAGATCCTCAGGGCCAGCTaGCAGTGCTCAGTGTGGAAGCCGTACCTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: APKSPSQILRAS*QCSVWKPYLES
Trigger: ACTTTCCAGGTACGGCTTCCACACTGAGCACTGTCAGCTGGCCCTGAGGATCTGTGATGGAGACTTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp TTAATTCTGAGGCACAGCTGCTCCAGGGGCACTCGCTaGATTTCTGGGAGCTGCTGCTTCAGAAGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LILRHSCSRGTR*ISGSCCFRSWW
Trigger: CCACCAGCTTCTGAAGCAGCAGCTCCCAGAAATCCAGCGAGTGCCCCTGGAGCAGCTGTGCCTCAGAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp TTTAGCAACCCGTTCAGCAACAGAGATTGCAGAGATCCGTCGGGGTaGGGTACAGATGATGTTGGCCACCCTCTCGGGTGGCCCATTCAG +
Preference number: 6 (lower is better)
Translates to: FSNPFSNRDCRDPSG*GTDDVGHPLGWPIQ
Trigger: CTGAATGGGCCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCCCGACGGATCTCTGCAATCTCTGTTGCTGAACGGGTTGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp GAAGCCGTACCTGGAAAGTTTCTGCACTGCCAAGGGTaGGACTGCACATTCTGGCACAGGAGGCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: EAVPGKFLHCQG*DCTFWHRRLHF
Trigger: GAAGTGGAGCCTCCTGTGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTACGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TACTGTCGCAGGGCCTGGACGGGCGCTTGGGCTCAGTaGAGACACAAAAGTCATCGCCATCATCCCAAATTC +
Preference number: 6 (lower is better)
Translates to: YCRRAWTGAWAQ*RHKSHRHHPKF
Trigger: GAATTTGGGATGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CCA 72 bp AGCGCCATCCTCTCTCCAAACGTCTCTGAGAAACACTaGCGGAGAAGATGCTCTAGTGCCGCCCCTAAGTCT +
Preference number: 6 (lower is better)
Translates to: SAILSPNVSEKH*RRRCSSAAPKS
Trigger: AGACTTAGGGGCGGCACTAGAGCATCTTCTCCGCCAGTGTTTCTCAGAGACGTTTGGAGAGAGGATGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CTGGTGGCTGAGGACTTGACACTTTCCAGCCGAATCTaGTATCCCACAGTCAGACCCACCCGTTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: LVAEDLTLSSRI*YPTVRPTRSAL
Trigger: AAGAGCAGAACGGGTGGGTCTGACTGTGGGATACCAGATTCGGCTGGAAAGTGTCAAGTCCTCAGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp AGACACAAAAGTCATCGCCATCATCCCAAATTCTATTaGAGGCCTTTCTACTGCCGCCGCCTCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RHKSHRHHPKFY*RPFYCRRLRRR
Trigger: GCGGCGGCGGAGGCGGCGGCAGTAGAAAGGCCTCAAATAGAATTTGGGATGATGGCGATGACTTTTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TACCTCGTCACAGCCAGCGCATCCTCCAGGAAAAACTaGTCAACAGGAAATGCACGGCCTGGGATGGTGATG +
Preference number: 6 (lower is better)
Translates to: YLVTASASSRKN*STGNARPGMVM
Trigger: CATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGATGCGCTGGCTGTGACGAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CAGTGCTCAGTGTGGAAGCCGTACCTGGAAAGTTTCTaGACTGCCAAGGGTGAGACTGCACATTCTGGCACA +
Preference number: 6 (lower is better)
Translates to: QCSVWKPYLESF*TAKGETAHSGT
Trigger: TGTGCCAGAATGTGCAGTCTCACCCTTGGCAGTGCAGAAACTTTCCAGGTACGGCTTCCACACTGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp GCTGAAATACTTGGAGAACAGCCCAGCGTCCAGAGTTaGACTCATGAGAATGACCTGGAGGGTCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: AEILGEQPSVQS*THENDLEGRSL
Trigger: CAGAGAGCGACCCTCCAGGTCATTCTCATGAGTGCAACTCTGGACGCTGGGCTGTTCTCCAAGTATTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CAGCGCATCCTCCAGGAAAAACTGATCAACAGGAAATaGACGGCCTGGGATGGTGATGACTGGGCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: QRILQEKLINRK*TAWDGDDWAVA
Trigger: AGCTACTGCCCAGTCATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAGGATGCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GGACCACTGGTTTGCGGTAGGCAGGTTTACTTATTCTaGTCTCGGAAGGTACTGGAGGGACGTTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: GPLVCGRQVYLF*SRKVLEGRSQE
Trigger: CTCCTGTGAACGTCCCTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTGCCTACCGCAAACCAGTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TCCAAACAGCGGAAGATAGAACCTAAGAGCATCAGCTaGCCTATCCTCACGTCCACGGGCAGAGAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SKQRKIEPKSIS*PILTSTGREAK
Trigger: CTTGGCCTCTCTGCCCGTGGACGTGAGGATAGGCAAGCTGATGCTCTTAGGTTCTATCTTCCGCTGTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TTGCTTTTGTTACTGTCGCAGGGCCTGGACGGGCGCTaGGGCTCAGTGAAGACACAAAAGTCATCGCCATCA +
Preference number: 6 (lower is better)
Translates to: LLLLLSQGLDGR*GSVKTQKSSPS
Trigger: TGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CAA 90 bp CTGACCACTCCAGAACTGGTCTTCTGGAACTTTCCCTCTGGGGTCTaGACCTGTACTACGTTTGGATACAGAGCGGCACACAGCACTGCT +
Preference number: 6 (lower is better)
Translates to: LTTPELVFWNFPSGV*TCTTFGYRAAHSTA
Trigger: AGCAGTGCTGTGTGCCGCTCTGTATCCAAACGTAGTACAGGTCAAGACCCCAGAGGGAAAGTTCCAGAAGACCAGTTCTGGAGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp AGAACACAAGGACAGCGCCTGGAGGGTAGGCGTGCTTaGCGTCTACAATCCACTCTAACAAGGCCTCTATTA +
Preference number: 6 (lower is better)
Translates to: RTQGQRLEGRRA*RLQSTLTRPLL
Trigger: TAATAGAGGCCTTGTTAGAGTGGATTGTAGACGGCAAGCACGCCTACCCTCCAGGCGCTGTCCTTGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GACTGCACATTCTGGCACAGGAGGCTCCACTTCTTCTaGGCCTATATATTCCCAAGGACTGCAGTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: DCTFWHRRLHFF*AYIFPRTAVRK
Trigger: CTTCCTGACTGCAGTCCTTGGGAATATATAGGCCCAGAAGAAGTGGAGCCTCCTGTGCCAGAATGTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GGGTTGGGTACAGATGATGTTGGCCACCCTCTCGGGTaGCCCATTCAGAGAATTATCCAGGATAAACTGTGG +
Preference number: 6 (lower is better)
Translates to: GLGTDDVGHPLG*PIQRIIQDKLW
Trigger: CCACAGTTTATCCTGGATAATTCTCTGAATGGGCCACCCGAGAGGGTGGCCAACATCATCTGTACCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp AGCCCAGCGTCCAGAGTTGCACTCATGAGAATGACCTaGAGGGTCGCTCTCTGCATCACAATGTCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SPASRVALMRMT*RVALCITMSFK
Trigger: TTTGAAGGACATTGTGATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAGTGCAACTCTGGACGCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp TCCTCTCCTGTGGCATCCAGGACACCATCTCCTCCCTaGGCTCGTTTTTCAATTTCTTTTGCTCGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: SSPVASRTPSPP*ARFSISFARSP
Trigger: AGGACTCCGAGCAAAAGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTGTCCTGGATGCCACAGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CTGCACAGGTCCATGCTGGGGTTTTTAATCTTATCCTaGAGGAGCTGGTCAAGTTCGCAGCGGAGTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LHRSMLGFLILS*RSWSSSQRSSF
Trigger: GAAGGAACTCCGCTGCGAACTTGACCAGCTCCTCCAGGATAAGATTAAAAACCCCAGCATGGACCTGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp AACCCTATGTCGGACAGCAGTTCAGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGCAGGGTTCTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: NPMSDSSSVNCR*RLAISCRVLPD
Trigger: GTCTGGGAGAACCCTGCAGGAAATGGCCAGCCTCAAACGACAATTCACTGAACTGCTGTCCGACATAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CCAGAACTGGTCTTCTGGAACTTTCCCTCTGGGGTCTaGACCTGTACTACGTTTGGATACAGAGCGGCACAC +
Preference number: 6 (lower is better)
Translates to: PELVFWNFPSGV*TCTTFGYRAAH
Trigger: GTGTGCCGCTCTGTATCCAAACGTAGTACAGGTCAAGACCCCAGAGGGAAAGTTCCAGAAGACCAGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp GTCTCTCCTTTGCTTTTGTTACTGTCGCAGGGCCTGGACGGGCGCTaGGGCTCAGTGAAGACACAAAAGTCATCGCCATCATCCCAAATT +
Preference number: 6 (lower is better)
Translates to: VSPLLLLLSQGLDGR*GSVKTQKSSPSSQI
Trigger: AATTTGGGATGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCCAGGCCCTGCGACAGTAACAAAAGCAAAGGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086555.11
CDS CAA 90 bp GAGTCCTTCTTTCACAAACCCTATGTCGGACAGCAGTTCAGTGAATaGTCGTTTGAGGCTGGCCATTTCCTGCAGGGTTCTCCCAGACAG +
Preference number: 6 (lower is better)
Translates to: ESFFHKPYVGQQFSE*SFEAGHFLQGSPRQ
Trigger: CTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCCTCAAACGACAATTCACTGAACTGCTGTCCGACATAGGGTTTGTGAAAGAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GACCACTCCAGAACTGGTCTTCTGGAACTTTCCCTCTaGGGTCTTGACCTGTACTACGTTTGGATACAGAGC +
Preference number: 6 (lower is better)
Translates to: DHSRTGLLELSL*GLDLYYVWIQS
Trigger: GCTCTGTATCCAAACGTAGTACAGGTCAAGACCCCAGAGGGAAAGTTCCAGAAGACCAGTTCTGGAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp AGGGACAGCCTCAGGTCTTCCTCTACCTCCTCCTGTGCAGTTCTGTaGTGCCTGGCTTTAAGCTTTTCCTTCGCAATCTGTTTCATGGAA +
Preference number: 6 (lower is better)
Translates to: RDSLRSSSTSSCAVL*CLALSFSFAICFME
Trigger: TTCCATGAAACAGATTGCGAAGGAAAAGCTTAAAGCCAGGCACAACAGAACTGCACAGGAGGAGGTAGAGGAAGACCTGAGGCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp AGTTCAGTGAATTGTCGTTTGAGGCTGGCCATTTCCTaGAGGGTTCTCCCAGACAGGAAATTCTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSVNCRLRLAIS*RVLPDRKFCLQ
Trigger: CTGCAGACAGAATTTCCTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCCTCAAACGACAATTCACTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp TTGGAGGTTTCACAAACACCGCCTGCTGCTCTTCGCTaGATAATGATGAGTGCAGCGGGTGAATTACACATC +
Preference number: 6 (lower is better)
Translates to: LEVSQTPPAALR*IMMSAAGELHI
Trigger: GATGTGTAATTCACCCGCTGCACTCATCATTATCCAGCGAAGAGCAGCAGGCGGTGTTTGTGAAACCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CTCAGGTCTTCCTCTACCTCCTCCTGTGCAGTTCTGTaGTGCCTGGCTTTAAGCTTTTCCTTCGCAATCTGT +
Preference number: 6 (lower is better)
Translates to: LRSSSTSSCAVL*CLALSFSFAIC
Trigger: ACAGATTGCGAAGGAAAAGCTTAAAGCCAGGCACAACAGAACTGCACAGGAGGAGGTAGAGGAAGACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp GTTTTCCCACATCCAGTCATACCACTTATGACAACCACTTGGTGCTaGCTCAGCAGTTTCAGAATGGTCTCTCTCTCTTCCCAAGCAGGC +
Preference number: 6 (lower is better)
Translates to: VFPHPVIPLMTTTWC*LSSFRMVSLSSQAG
Trigger: GCCTGCTTGGGAAGAGAGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp TCTTTCACAAACCCTATGTCGGACAGCAGTTCAGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGCAGGGTTCTCCCAGACAGGAAATTC +
Preference number: 6 (lower is better)
Translates to: SFTNPMSDSSSVNCR*RLAISCRVLPDRKF
Trigger: GAATTTCCTGTCTGGGAGAACCCTGCAGGAAATGGCCAGCCTCAAACGACAATTCACTGAACTGCTGTCCGACATAGGGTTTGTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp CATCCAGGACACCATCTCCTCCCTGGGCTCGTTTTTCAATTTCTTTaGCTCGGAGTCCTTCTTTCACAAACCCTATGTCGGACAGCAGTT +
Preference number: 6 (lower is better)
Translates to: HPGHHLLPGLVFQFL*LGVLLSQTLCRTAV
Trigger: AACTGCTGTCCGACATAGGGTTTGTGAAAGAAGGACTCCGAGCAAAAGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTGTCCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp ATATCCGTCATTCTTGGTAACGAACTTCAGCTCAGCTaGCTTTGGCTGCAGTCTGACCACTCCAGAACTGGT +
Preference number: 6 (lower is better)
Translates to: ISVILGNELQLS*LWLQSDHSRTG
Trigger: ACCAGTTCTGGAGTGGTCAGACTGCAGCCAAAGTCAGCTGAGCTGAAGTTCGTTACCAAGAATGACGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GTAGGCAGGTTTACTTATTCTGGTCTCGGAAGGTACTaGAGGGACGTTCACAGGAGGAACGCTATACTTATG +
Preference number: 6 (lower is better)
Translates to: VGRFTYSGLGRY*RDVHRRNAILM
Trigger: CATAAGTATAGCGTTCCTCCTGTGAACGTCCCTCCAGTACCTTCCGAGACCAGAATAAGTAAACCTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CTCCAGGAAAAACTGATCAACAGGAAATGCACGGCCTaGGATGGTGATGACTGGGCAGTAGCTGAAATACTT +
Preference number: 6 (lower is better)
Translates to: LQEKLINRKCTA*DGDDWAVAEIL
Trigger: AAGTATTTCAGCTACTGCCCAGTCATCACCATCCCAGGCCGTGCATTTCCTGTTGATCAGTTTTTCCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CTGGAGTCAAGGCTCCCAAGTCTCGCAACCGTACTTTaGAGGCACGAAGAGAATCAATATGTGGAGGTTCAA +
Preference number: 6 (lower is better)
Translates to: LESRLPSLATVL*RHEENQYVEVQ
Trigger: TTGAACCTCCACATATTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGAGACTTGGGAGCCTTGACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CACCATCTCCTCCCTGGGCTCGTTTTTCAATTTCTTTaGCTCGGAGTCCTTCTTTCACAAACCCTATGTCGG +
Preference number: 6 (lower is better)
Translates to: HHLLPGLVFQFL*LGVLLSQTLCR
Trigger: CCGACATAGGGTTTGTGAAAGAAGGACTCCGAGCAAAAGAAATTGAAAAACGAGCCCAGGGAGGAGATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp GCAGGGTTCTCCCAGACAGGAAATTCTGTCTGCAGTAATTATAGCTaGCTCGTGCGCTTTCTTTTGTACTCAGCTGCCAACCCTTATATG +
Preference number: 6 (lower is better)
Translates to: AGFSQTGNSVCSNYS*LVRFLLYSAANPYM
Trigger: CATATAAGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTGTCTGGGAGAACCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp CTTCAGGTTCACATAGCTTTCATTCTCCACGATAATTaGTGCAGGTCCTTCATCCTCATCGGCATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LQVHIAFILHDN*CRSFILIGILL
Trigger: GAGGAGGATGCCGATGAGGATGAAGGACCTGCATCAATTATCGTGGAGAATGAAAGCTATGTGAACCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TGGAGTCAAGGCTCCCAAGTCTCGCAACCGTACTTTTaGGGCACGAAGAGAATCAATATGTGGAGGTTCAAT +
Preference number: 6 (lower is better)
Translates to: WSQGSQVSQPYF*GTKRINMWRFN
Trigger: ATTGAACCTCCACATATTGATTCTCTTCGTGCCTCAAAAGTACGGTTGCGAGACTTGGGAGCCTTGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CCACATCCAGTCATACCACTTATGACAACCACTTGGTaGTTGCTCAGCAGTTTCAGAATGGTCTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: PHPVIPLMTTTW*LLSSFRMVSLS
Trigger: AGAGAGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp GTTGCACTCATGAGAATGACCTGGAGGGTCGCTCTCTaGATCACAATGTCCTTCAAAACTAGCAGTAAGAAG +
Preference number: 6 (lower is better)
Translates to: VALMRMTWRVAL*ITMSFKTSSKK
Trigger: CTTCTTACTGCTAGTTTTGAAGGACATTGTGATGCAGAGAGCGACCCTCCAGGTCATTCTCATGAGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CCCAGACAGGAAATTCTGTCTGCAGTAATTATAGCTTaGTCGTGCGCTTTCTTTTGTACTCAGCTGCCAACC +
Preference number: 6 (lower is better)
Translates to: PRQEILSAVIIA*SCAFFCTQLPT
Trigger: GGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp ACCATCTCCTCCCTGGGCTCGTTTTTCAATTTCTTTTaGTCGGAGTCCTTCTTTCACAAACCCTATGTCGGA +
Preference number: 6 (lower is better)
Translates to: TISSLGSFFNFF*SESFFHKPYVG
Trigger: TCCGACATAGGGTTTGTGAAAGAAGGACTCCGAGCAAAAGAAATTGAAAAACGAGCCCAGGGAGGAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp TTCCCACATCCAGTCATACCACTTATGACAACCACTTaGTGCTTGCTCAGCAGTTTCAGAATGGTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: FPHPVIPLMTTT*CLLSSFRMVSL
Trigger: GAGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CTTCCCAAGCAGGCAGTAACTGTCTTTCTTGCAGAATaGCGTGGAACTGTCTGGAAGCCTGTTTCATCTGAA +
Preference number: 6 (lower is better)
Translates to: LPKQAVTVFLAE*RGTVWKPVSSE
Trigger: TTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGACAGTTACTGCCTGCTTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp CATCCAGTCATACCACTTATGACAACCACTTGGTGCTaGCTCAGCAGTTTCAGAATGGTCTCTCTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: HPVIPLMTTTWC*LSSFRMVSLSS
Trigger: GGAAGAGAGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp GGAAATTCTGTCTGCAGTAATTATAGCTTGCTCGTGCGCTTTCTTTaGTACTCAGCTGCCAACCCTTATATGCACATAGAAGGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: GNSVCSNYSLLVRFL*YSAANPYMHIEGPG
Trigger: ACCTGGCCCTTCTATGTGCATATAAGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TCTGTGTGGTTTTCCCACATCCAGTCATACCACTTATaGCAACCACTTGGTGCTTGCTCAGCAGTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: SVWFSHIQSYHL*QPLGACSAVSE
Trigger: TTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAAAACCACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TTGAGGCACGAAGAGAATCAATATGTGGAGGTTCAATaGGCCGAGAGAACACGGACTGGAGATTATGAGTAC +
Preference number: 6 (lower is better)
Translates to: LRHEENQYVEVQ*AERTRTGDYEY
Trigger: GTACTCATAATCTCCAGTCCGTGTTCTCTCGGCTCATTGAACCTCCACATATTGATTCTCTTCGTGCCTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp AAATATGTAAACGACAAGCCAGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACCAGGGGAGCTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: KYVNDKPEVGSH*WNKMPPGELGR
Trigger: CCTACCAAGCTCCCCTGGTGGCATTTTATTCCACCAATGAGAACCTACCTCTGGCTTGTCGTTTACATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp GTAACTGTCTTTCTTGCAGAATTGCGTGGAACTGTCTaGAAGCCTGTTTCATCTGAAACTGCCTGCAGATCT +
Preference number: 6 (lower is better)
Translates to: VTVFLAELRGTV*KPVSSETACRS
Trigger: AGATCTGCAGGCAGTTTCAGATGAAACAGGCTTCCAGACAGTTCCACGCAATTCTGCAAGAAAGACAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp GCCTGCAGATCTTACTGTTCTCAGCAAATAAGGACTTaGCCGGCCTGTCGTATCTTTTGTAACTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: ACRSYCSQQIRT*PACRIFCNSSS
Trigger: AGAAGAGGAGTTACAAAAGATACGACAGGCCGGCAAAGTCCTTATTTGCTGAGAACAGTAAGATCTGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TTTCCCACATCCAGTCATACCACTTATGACAACCACTaGGTGCTTGCTCAGCAGTTTCAGAATGGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: FPTSSHTTYDNH*VLAQQFQNGLS
Trigger: AGAGAGACCATTCTGAAACTGCTGAGCAAGCACCAAGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp TCCCAGACAGGAAATTCTGTCTGCAGTAATTATAGCTaGCTCGTGCGCTTTCTTTTGTACTCAGCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: SQTGNSVCSNYS*LVRFLLYSAAN
Trigger: GTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTGTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TCATACATAAAGGTTGTGTCGTCATCAGCGTCAAGGTaGGGGTCATTTACGTTTCTTTCTGCTCTCCCAATC +
Preference number: 6 (lower is better)
Translates to: SYIKVVSSSASR*GSFTFLSALPI
Trigger: GATTGGGAGAGCAGAAAGAAACGTAAATGACCCTCACCTTGACGCTGATGACGACACAACCTTTATGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp GGAACTGTCTGGAAGCCTGTTTCATCTGAAACTGCCTaGAGATCTTACTGTTCTCAGCAAATAAGGACTTTG +
Preference number: 6 (lower is better)
Translates to: GTVWKPVSSETA*RSYCSQQIRTL
Trigger: CAAAGTCCTTATTTGCTGAGAACAGTAAGATCTGCAGGCAGTTTCAGATGAAACAGGCTTCCAGACAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS TCA 72 bp TCCTCGAGTTCTGACAATCTTTCCCCTTCTAGCATTTaGTTAGAAAGGAAAGTGTTACTTGGGACCACTGGT +
Preference number: 6 (lower is better)
Translates to: SSSSDNLSPSSI*LERKVLLGTTG
Trigger: ACCAGTGGTCCCAAGTAACACTTTCCTTTCTAATCAAATGCTAGAAGGGGAAAGATTGTCAGAACTCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS GCA 72 bp CAGGAAATTCTGTCTGCAGTAATTATAGCTTGCTCGTaGGCTTTCTTTTGTACTCAGCTGCCAACCCTTATA +
Preference number: 6 (lower is better)
Translates to: QEILSAVIIACS*AFFCTQLPTLI
Trigger: TATAAGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGACAGAATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CCA 72 bp CATTTGATTAGAAAGGAAAGTGTTACTTGGGACCACTaGTTTGCGGTAGGCAGGTTTACTTATTCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: HLIRKESVTWDH*FAVGRFTYSGL
Trigger: GAGACCAGAATAAGTAAACCTGCCTACCGCAAACCAGTGGTCCCAAGTAACACTTTCCTTTCTAATCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp GTCTGCAGTAATTATAGCTTGCTCGTGCGCTTTCTTTaGTACTCAGCTGCCAACCCTTATATGCACATAGAA +
Preference number: 6 (lower is better)
Translates to: VCSNYSLLVRFL*YSAANPYMHIE
Trigger: TTCTATGTGCATATAAGGGTTGGCAGCTGAGTACAAAAGAAAGCGCACGAGCAAGCTATAATTACTGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 90 bp ACAGGTTTCAGGCGAAGTGTCCCGTACATTTTTGCTACTTTCCTTTaGCTTAGACTTGCAGAATTTGTTTGTCAAATAATCCAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: TGFRRSVPYIFATFL*LRLAEFVCQIIQFQ
Trigger: TTGGAACTGGATTATTTGACAAACAAATTCTGCAAGTCTAAGCAAAAGGAAAGTAGCAAAAATGTACGGGACACTTCGCCTGAAACCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp AATTTACAGGTTTCAGGCGAAGTGTCCCGTACATTTTaGCTACTTTCCTTTTGCTTAGACTTGCAGAATTTG +
Preference number: 6 (lower is better)
Translates to: NLQVSGEVSRTF*LLSFCLDLQNL
Trigger: CAAATTCTGCAAGTCTAAGCAAAAGGAAAGTAGCAAAAATGTACGGGACACTTCGCCTGAAACCTGTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11
CDS CAA 72 bp AGGCGAAGTGTCCCGTACATTTTTGCTACTTTCCTTTaGCTTAGACTTGCAGAATTTGTTTGTCAAATAATC +
Preference number: 6 (lower is better)
Translates to: RRSVPYIFATFL*LRLAEFVCQII
Trigger: GATTATTTGACAAACAAATTCTGCAAGTCTAAGCAAAAGGAAAGTAGCAAAAATGTACGGGACACTTCGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038166.9
ENSMUST00000086555.11