Pregenerated sensors for DHX36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027770Ensembl transcript IDs: ENSMUST00000029336.6
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGCAGCAGTACCTGAACCAGCATCGGCAGCAAATCCATGGCAGTaGTATGCATATGTCCTGGTCATCTCACAACTTACTAGGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: MAAVPEPASAANPWQ*YAYVLVISQLTRER Trigger: TCTTTCCCTAGTAAGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATGCTGGTTCAGGTACTGCTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 90 bp | GCAAGCCACCCTCTATCTTGCTTAGCTATGTCAGACAGCAGCAGATaGTGGCAAGACATCACTTATTTTTGTGTACTGCTTCTCTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: ASHPLSCLAMSDSSR*WQDITYFCVLLLCK Trigger: TTTACAGAGAAGCAGTACACAAAAATAAGTGATGTCTTGCCAGCATCTGCTGCTGTCTGACATAGCTAAGCAAGATAGAGGGTGGCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR TCA 90 bp | CTCACAATCTTTACCTGTCTTTCAAATAAGGAAAAGGTGATGAGCTaGGACAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LTIFTCLSNKEKVMS*DRTFIITSRHMLCC Trigger: GCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTGTCTCAGCTCATCACCTTTTCCTTATTTGAAAGACAGGTAAAGATTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 90 bp | GGAAAGAAGACCAAACTTGATTATCTCAGAATAATCACTGGCTCATaGATAGAACAAAAGCAACACCTTCAAGCTAGAGGTAGGGACTAC | + |
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Preference number: 1 (lower is better) Translates to: GKKTKLDYLRIITGS*IEQKQHLQARGRDY Trigger: GTAGTCCCTACCTCTAGCTTGAAGGTGTTGCTTTTGTTCTATCCATGAGCCAGTGATTATTCTGAGATAATCAAGTTTGGTCTTCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR TCA 90 bp | ACTGCGGTGTTGGCTACACAATTTCACACAGTAGACCAAATACACTaGAGTTATACTCTTAAACTGGCTAACTATACACACTACCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: TAVLATQFHTVDQIH*SYTLKLANYTHYLQ Trigger: TTGAAGGTAGTGTGTATAGTTAGCCAGTTTAAGAGTATAACTTCAGTGTATTTGGTCTACTGTGTGAAATTGTGTAGCCAACACCGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 90 bp | AAAGGAATTTCTCAATGTTACAACTTTGGGAATTCTCCCAAAGTGTaGACATATCTACAACAGAGGATAAGGTCAGAAAGCATATTACTT | + |
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Preference number: 1 (lower is better) Translates to: KGISQCYNFGNSPKV*TYLQQRIRSESILL Trigger: AAGTAATATGCTTTCTGACCTTATCCTCTGTTGTAGATATGTCCACACTTTGGGAGAATTCCCAAAGTTGTAACATTGAGAAATTCCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTGTGTGAAGACCATATaGATCAGACACTGTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTCVKTI*IRHCGP Trigger: AGGACCACAGTGTCTGATGCATATGGTCTTCACACA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR TCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACCAGTCATCTAGTATGTaGGGCCCTTGGCCTAACCAT | + |
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Preference number: 2 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNQSSSM*GPWPNH Trigger: ATGGTTAGGCCAAGGGCCTCACATACTAGATGACTG...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGACAGGGCTGGGGATGTaGCTCAGTAATATAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQTGLGM*LSNIAV Trigger: GACTGCTATATTACTGAGCCACATCCCCAGCCCTGT...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGGTGTTTTACAGGGCTaGGGATGTGGCTCAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: IGSKSMAVLCICPGHLTTGVLQG*GCGSVI Trigger: TATTACTGAGCCACATCCCCAGCCCTGTAAAACACC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CAA 90 bp | GAGCTGAGACAGGACCTTCATCATCACATCCAGACACATGCTCTGTaGCTACATTATGCTACACAGAACAGGACCGTAGGTATTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: ELRQDLHHHIQTHAL*LHYATQNRTVGIEP Trigger: AGGTTCAATACCTACGGTCCTGTTCTGTGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTGTCTCAGCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR TCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGTAACAAGCACTGTGTaGAGACCATATGCATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: IGSKSMAVLCICPGHLTTVTSTV*RPYASD Trigger: GTCTGATGCATATGGTCTTCACACAGTGCTTGTTAC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR GCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACAGACACATGCTCTGTTaGTACATTATGCTACACAGA | + |
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Preference number: 2 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNRHMLC*YIMLHR Trigger: TCTGTGTAGCATAATGTAGCAACAGAGCATGTGTCT...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGTATTGACGAAAAGCTaGTCCCTGGGCACCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIVLTKS*SLGTRG Trigger: CCCTCTGGTGCCCAGGGAGCAGCTTTTCGTCAATAC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGTACACAATGCCACGTaGCACATACTCAGACATGGC | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIVHNAT*HILRHG Trigger: GCCATGTCTGAGTATGTGTCACGTGGCATTGTGTAC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACATTTATAGTAGCTAGATaGCACTGTTTAGTCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: QDLHHHIQTHALLLHYATFIVAR*HCLVMH Trigger: GTGCATGACTAAACAGTGCCATCTAGCTACTATAAA...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTTCGGCAGCAAATCCATaGCAGTGCTATGCATATGTC | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESISAANP*QCYAYV Trigger: GACATATGCATAGCACTGCCATGGATTTGCTGCCGA...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTACACATACTCAGACATaGCAGCAGTACCTGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESITHTQT*QQYLNQ Trigger: CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTACCATTTACTTAGCCTaGGTGCAGATACCAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: DGNVLHEDCGVGYTISHSTIYLA*VQIPNN Trigger: ATTATTTGGTATCTGCACCCAGGCTAAGTAAATGGT...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTTCTCAGAATAATCACTaGCTCATGGATAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: DGNVLHEDCGVGYTISHSSQNNH*LMDRTK Trigger: TTTTGTTCTATCCATGAGCCAGTGATTATTCTGAGA...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTCATGATTTACTTTCCTaGATACACTTTCCCATATTC | + |
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Preference number: 2 (lower is better) Translates to: DGNVLHEDCGVGYTISHSHDLLS*IHFPIF Trigger: GAATATGGGAAAGTGTATCCAGGAAAGTAAATCATG...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTAAACAAGGGACACAGTaGATCCAAATCTTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIKQGTQ*IQIFVH Trigger: GTGTACAAAGATTTGGATGCACTGTGTCCCTTGTTT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGCTATGCATATGTCCTaGTCATCTCACAACTTACTA | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIAMHMS*SSHNLL Trigger: TAGTAAGTTGTGAGATGACCAGGACATATGCATAGC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTATAACACCACCACTATaGTTAGGGAGAAGCATAATT | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIITPPL*LGRSII Trigger: AATTATGCTTCTCCCTAATCATAGTGGTGGTGTTAT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTATTCTTACTTCATACTaGTTTTTGGCCCAACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SMLILNEKGWTHGLCESIILTSY*FLAQLS Trigger: AGAAAGTTGGGCCAAAAAGCAGTATGAAGTAAGAAT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | CGAACCTTCAGAGCACCCGCAAGCCACCCTCTATCTTaGTTAGCTATGTCAGACAGCAGCAGATGCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RTFRAPASHPLS*LAMSDSSRCWQ Trigger: TTGCCAGCATCTGCTGCTGTCTGACATAGCTAAGCAAGATAGAGGGTGGCTTGCGGGTGCTCTGAAGGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 72 bp | GCAGCAGTACCTGAACCAGCATCGGCAGCAAATCCATaGCAGTGCTATGCATATGTCCTGGTCATCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: AAVPEPASAANP*QCYAYVLVISQ Trigger: TTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATGCTGGTTCAGGTACTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 72 bp | CTTTGTACACAATGCCACGTGACACATACTCAGACATaGCAGCAGTACCTGAACCAGCATCGGCAGCAAATC | + |
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Preference number: 3 (lower is better) Translates to: LCTQCHVTHTQT*QQYLNQHRQQI Trigger: GATTTGCTGCCGATGCTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | GTACCTGAACCAGCATCGGCAGCAAATCCATGGCAGTaGTATGCATATGTCCTGGTCATCTCACAACTTACT | + |
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Preference number: 3 (lower is better) Translates to: VPEPASAANPWQ*YAYVLVISQLT Trigger: AGTAAGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATGCTGGTTCAGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | GCTGAGACAGGACCTTCATCATCACATCCAGACACATaGTCTGTTGCTACATTATGCTACACAGAACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: AETGPSSSHPDT*SVATLCYTEQD Trigger: GTCCTGTTCTGTGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTGTCTCAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CAA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTAGCCTGAAAACAGCCTaGTTTGTCACCTCCACTAAG | + |
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Preference number: 3 (lower is better) Translates to: DGNVLHEDCGVGYTISHSSLKTA*FVTSTK Trigger: CTTAGTGGAGGTGACAAACAAGGCTGTTTTCAGGCT...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | CCTCTATCTTGCTTAGCTATGTCAGACAGCAGCAGATaGTGGCAAGACATCACTTATTTTTGTGTACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: PLSCLAMSDSSR*WQDITYFCVLL Trigger: AAGCAGTACACAAAAATAAGTGATGTCTTGCCAGCATCTGCTGCTGTCTGACATAGCTAAGCAAGATAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR TCA 72 bp | TTTACCTGTCTTTCAAATAAGGAAAAGGTGATGAGCTaGGACAGGACCTTCATCATCACATCCAGACACATG | + |
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Preference number: 3 (lower is better) Translates to: FTCLSNKEKVMS*DRTFIITSRHM Trigger: CATGTGTCTGGATGTGATGATGAAGGTCCTGTCTCAGCTCATCACCTTTTCCTTATTTGAAAGACAGGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | AAGAGCACTCAGAACAAGTCATTCTGGGTCTTGGAGTaGATTTTTCAGATAGGAGTCGTAATCTGTGAACAA | + |
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Preference number: 3 (lower is better) Translates to: KSTQNKSFWVLE*IFQIGVVICEQ Trigger: TTGTTCACAGATTACGACTCCTATCTGAAAAATGCACTCCAAGACCCAGAATGACTTGTTCTGAGTGCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CAA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGTCATAACCCAGGGCTaGGCATTTTGCCAAAAACTA | + |
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Preference number: 3 (lower is better) Translates to: SMLILNEKGWTHGLCESIVITQG*AFCQKL Trigger: TAGTTTTTGGCAAAATGCCAAGCCCTGGGTTATGAC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR GCA 72 bp | TGGACAAATAGTAACAAGCACTGTGTGAAGACCATATaGATCAGACACTGTGGTCCTTTACATGTTACCATA | + |
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Preference number: 3 (lower is better) Translates to: WTNSNKHCVKTI*IRHCGPLHVTI Trigger: TATGGTAACATGTAAAGGACCACAGTGTCTGATGCATATGGTCTTCACACAGTGCTTGTTACTATTTGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 72 bp | TCTCAATGTTACAACTTTGGGAATTCTCCCAAAGTGTaGACATATCTACAACAGAGGATAAGGTCAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SQCYNFGNSPKV*TYLQQRIRSES Trigger: GCTTTCTGACCTTATCCTCTGTTGTAGATATGTCCACACTTTGGGAGAATTCCCAAAGTTGTAACATTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CCA 72 bp | ACCAAACTTGATTATCTCAGAATAATCACTGGCTCATaGATAGAACAAAAGCAACACCTTCAAGCTAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TKLDYLRIITGS*IEQKQHLQARG Trigger: ACCTCTAGCTTGAAGGTGTTGCTTTTGTTCTATCCATGAGCCAGTGATTATTCTGAGATAATCAAGTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CAA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTCTCAATGTTACAACTTaGGGAATTCTCCCAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SMLILNEKGWTHGLCESILNVTT*GILPKC Trigger: ACACTTTGGGAGAATTCCCAAAGTTGTAACATTGAG...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR TCA 72 bp | TCATCTCACAACTTACTAGGGAAAGAAGACCAAACTTaGTTATCTCAGAATAATCACTGGCTCATGGATAGA | + |
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Preference number: 3 (lower is better) Translates to: SSHNLLGKEDQT*LSQNNHWLMDR Trigger: TCTATCCATGAGCCAGTGATTATTCTGAGATAATCAAGTTTGGTCTTCTTTCCCTAGTAAGTTGTGAGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR-3UTR CAA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTATTCTAACAACATTTTaGCATTTGCTGTGGAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: SMLILNEKGWTHGLCESIILTTF*HLLWRL Trigger: TAGCCTCCACAGCAAATGCAAAAATGTTGTTAGAAT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR TCA 72 bp | TTGGCTACACAATTTCACACAGTAGACCAAATACACTaGAGTTATACTCTTAAACTGGCTAACTATACACAC | + |
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Preference number: 3 (lower is better) Translates to: LATQFHTVDQIH*SYTLKLANYTH Trigger: GTGTGTATAGTTAGCCAGTTTAAGAGTATAACTTCAGTGTATTTGGTCTACTGTGTGAAATTGTGTAGCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTCAGTACCATACCCATaGTCCTCAGGAGCAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTSVPYP*SSGANQ Trigger: CTGGTTTGCTCCTGAGGATCATGGGTATGGTACTGA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTCCCAGTCTACAGGATaGGGGCTTTCAATCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTSQSTG*GLSIFS Trigger: AGAGAAGATTGAAAGCCCTCATCCTGTAGACTGGGA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| 3UTR CAA 72 bp | CCGAACCTTCAGAGCACCCGCAAGCCACCCTCTATCTaGCTTAGCTATGTCAGACAGCAGCAGATGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PNLQSTRKPPSI*LSYVRQQQMLA Trigger: TGCCAGCATCTGCTGCTGTCTGACATAGCTAAGCAAGATAGAGGGTGGCTTGCGGGTGCTCTGAAGGTTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCAGTCTTAGCTTGGACTaGATTCAGCAGCTGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTSLSLD*IQQLHN Trigger: ATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGACT...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTGGTGGCAAGTTCCTTaGAGTAGCCTTTTCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTWWQVP*SSLFLS Trigger: ACTCAAGAAAAGGCTACTCCAAGGAACTTGCCACCA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTCACCTGATGGTTATTaGTTAGATTTACCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTSPDGY*LDLPAP Trigger: AGGAGCTGGTAAATCTAATCAATAACCATCAGGTGA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGTCGGACTGGAGCCACTaGAGAATGATTCCTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQSDWSH*RMIPVV Trigger: CACAACAGGAATCATTCTTCAGTGGCTCCAGTCCGA...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACATTGCCACAAGACTCTaGCCTTTCTGTGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNIATRL*PFCGHS Trigger: AGAGTGGCCACAGAAAGGGCAGAGTCTTGTGGCAAT...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTTCCCAGCCCTCAAATaGATTCACAACTGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNFPALK*IHNCQV Trigger: CACCTGACAGTTGTGAATGCATTTGAGGGCTGGGAA...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACGGATATCTGCGCTTCTaGATCTTTGTCAGTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNGYLRF*IFVSLS Trigger: GCTAAGACTGACAAAGATTCAGAAGCGCAGATATCC...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTATGAACTGCGTAACCTaGGTGGTTTTGCCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IGSKSMAVLCICPGHLTTMNCVT*VVLPQP Trigger: TGGTTGTGGCAAAACCACTCAGGTTACGCAGTTCAT...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGTTGACAGACTTAGGATaGATAGAAACCAGGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQLTDLG*IETRPS Trigger: TGACGGCCTGGTTTCTATTCATCCTAAGTCTGTCAA...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGAGTACACACTATTCTaGAGGCAGACCCTTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSKSMAVLCICPGHLTTEYTLF*RQTLFL Trigger: GAGGAAAAGGGTCTGCCTGCAGAATAGTGTGTACTC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGAACATCTACGGTACTTaGAGAGTATCTTGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQNIYGT*RVSCPQ Trigger: CTGCGGACAAGATACTCTGCAAGTACCGTAGATGTT...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGGCAGTCGGGCTAAATaGACACCAAGAGGTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IGSKSMAVLCICPGHLTTGSRAK*TPRGVN Trigger: ATTAACACCTCTTGGTGTCCATTTAGCCCGACTGCC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTTACTGCACAGTCTCTTaGCTTAGTGTCGTCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSYCTVS*LSVVPV Trigger: GACTGGGACGACACTAAGTCAAGAGACTGTGCAGTA...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGACTGAATTCAGCAGCTaGACAATTTGCTCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQTEFSS*TICSSR Trigger: TCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGT...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACCAGTACTATTACCATTaGCACAAGACTCTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNQYYYH*HKTLPF Trigger: AAAGGGCAGAGTCTTGTGGCAATGGTAATAGTACTG...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGCTTTGGGACTTCTACTaGTTACAAATCCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQLWDFY*LQIQLQ Trigger: TTGGAGCTGGATTTGTAAGCAGTAGAAGTCCCAAAG...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACAGTCCCTTAACAAGATaGGCAATTCTTTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNSPLTR*AILSGD Trigger: GTCTCCAGAAAGAATTGCCCATCTTGTTAAGGGACT...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGTTCACAACTGTCAGGTaGTCACTTCTAGTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQFTTVR*SLLVSF Trigger: AAAGGAAACTAGAAGTGATCACCTGACAGTTGTGAA...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGCAAACCAGGATATCTaGGCTTCTGAATCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGSKSMAVLCICPGHLTTANQDI*ASESLS Trigger: TGACAAAGATTCAGAAGCGCAGATATCCTGGTTTGC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACAAACCCCTCTTGAACTaGGATCTATGTTCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNKPLLN*DLCSFW Trigger: CCAAAAAGAACATAGATCCCAGTTCAAGAGGGGTTT...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTCATTTTTCCAATATGTaGCTCAACAGGCAGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSHFSNM*LNRQSG Trigger: GCCCGACTGCCTGTTGAGCCACATATTGGAAAAATG...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTCTAATTCTTCTCGGCTaGGTACACACTATTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSLILLG*VHTILQ Trigger: CTGCAGAATAGTGTGTACTCAGCCGAGAAGAATTAG...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTCATCAAGTACAATATaGCTAACACTGGACAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNSSSTI*LTLDKR Trigger: ACGTTTGTCCAGTGTTAGTCATATTGTACTTGATGA...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACATCTTGTCTATTTACATaGCCCTGCATGAAACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDLHHHIQTHALLLHYATSCLFT*PCMKPL Trigger: GAGGGGTTTCATGCAGGGTCATGTAAATAGACAAGA...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTGATCATGCAAAGTACTaGTATTGTCCCAGCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSDHAKY*YCPSLV Trigger: TACCAGGCTGGGACAATATCAGTACTTTGCATGATC...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTACTCTGCCCTTTCTGTaGCCACTCTCTCAGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESITLPFL*PLSQRL Trigger: CAGTCGCTGAGAGAGTGGCCACAGAAAGGGCAGAGT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACACCATTAGGTGTTTTATaGAGAGCACCACTGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLHHHIQTHALLLHYATPLGVL*RAPLPH Trigger: ATGAGGCAGTGGTGCTCTCCATAAAACACCTAATGG...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| 3UTR CAA 72 bp | AGGGTGATGGGAATGTTCTACATGAAGACTGCGGTGTaGGCTACACAATTTCACACAGTAGACCAAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: RVMGMFYMKTAV*ATQFHTVDQIH Trigger: GTGTATTTGGTCTACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTACTACAGCTCTCTCCTaGCTCTCAGCCTCCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESITTALS*LSASLF Trigger: GAACAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTGGTGATGCTAGTCTCTaGAATGTTGGTAGCAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSGDASL*NVGSNY Trigger: GTAATTGCTACCAACATTGCAGAGACTAGCATCACC...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTTTGTTCTTCTGCGTCTaGTTCTTGGCGTACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESILFFCV*FLAYHR Trigger: CCTGTGGTACGCCAAGAAGCAGACGCAGAAGAACAA...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACACGTACAAGTATATACTaGTTGTTCTCATCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLHHHIQTHALLLHYATRTSIY*LFSSSG Trigger: ACCTGAAGATGAGAACAAGCAGTATATACTTGTACG...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACAAAGATATTCCACAACTaGAAAAGTAAACCCGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLHHHIQTHALLLHYATKIFHN*KSKPGY Trigger: ATACCCGGGTTTACTTTTCCAGTTGTGGAATATCTT...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTTTTACCAGCTCCTTCTaGATTCCATATGAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESIFTSSF*IPYEGS Trigger: GCTGCCTTCATATGGAATGCAGAAGGAGCTGGTAAA...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTTCATCATCCATCATTTaGAAAACATCTACGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: DGNVLHEDCGVGYTISHSSSSII*KTSTVL Trigger: AAGTACCGTAGATGTTTTGCAAATGATGGATGATGA...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTTTGTCAGTCTTAGCTTaGACTGAATTCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESILSVLA*TEFSSC Trigger: GCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAA...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTTTAAATACCTGTGTCTaGTTGACGGTAGGCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESILNTCV*LTVGIS Trigger: ACTGATGCCTACCGTCAACCAGACACAGGTATTTAA...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGGAGTAGCCTTTTCTTaGGTTTTGATCAAGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESIGVAFS*VLIKSR Trigger: TCTAGACTTGATCAAAACTCAAGAAAAGGCTACTCC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR TCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTACAGCAATAATTTCCTaGTCCTTATCTTTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESITAIIS*SLSFWM Trigger: CATCCAGAAAGATAAGGATCAGGAAATTATTGCTGT...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTGGTGTTAATTCTTCTTaGTTATCCAAAGCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLILNEKGWTHGLCESIGVNSS*LSKALS Trigger: ACTGAGTGCTTTGGATAAGCAAGAAGAATTAACACC...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS GCA 90 bp | ACTACAGCTCTCTCCTGCCTCTCAGCCTCCTTGTTCTTCTGCGTCTaGTTCTTGGCGTACCACAGGCCGATCTCGCGACCCTTAAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTALSCLSASLFFCV*FLAYHRPISRPLRC Trigger: ACACCTTAAGGGTCGCGAGATCGGCCTGTGGTACGCCAAGAAGCAGACGCAGAAGAACAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS GCA 90 bp | ATGTGCACTACAGCTCTCTCCTGCCTCTCAGCCTCCTTGTTCTTCTaGGTCTGCTTCTTGGCGTACCACAGGCCGATCTCGCGACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: MCTTALSCLSASLFF*VCFLAYHRPISRPL Trigger: TAAGGGTCGCGAGATCGGCCTGTGGTACGCCAAGAAGCAGACGCAGAAGAACAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGTGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGTGCCTCTCAGCCTCCTaGTTCTTCTGCGTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQCLSAS*FFCVCF Trigger: GAAGCAGACGCAGAAGAACAAGGAGGCTGAGAGGCA...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCTTAGCTTTTGGATCTTaGGGACTTCTACTGCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTLAFGS*GLLLLT Trigger: TGTAAGCAGTAGAAGTCCCAAAGATCCAAAAGCTAA...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTCCCTGGGCACCAGAGGGTAGAAGCAGGCAGGGGAGGGCATTTTACCCGGTCAATATATGATTaGTCTGTGATCCTAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLLPGHQRVEAGRGGHFTRSIYD*SVILNV Trigger: GACATTTAGGATCACAGACAAATCATATATTGACCG...GGTAAAATGCCCTCCCCTGCCTGCTTCTACCCTCTGGTGCCCAGGGAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | TGTACACAATGCCACGTGACACATACTCAGACATGGCAGCAGTACCTGAACCAGCCAGTACTATTACCATaGCCACAAGACTCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTQCHVTHTQTWQQYLNQPVLLP*PQDSAL Trigger: AAGGGCAGAGTCTTGTGGCAATGGTAATAGTACTGG...CTGGTTCAGGTACTGCTGCCATGTCTGAGTATGTGTCACGTGGCATTGTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACAATACCTGTGTCTGGTaGACGGTAGGCATCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNNTCVW*TVGISE Trigger: TTCACTGATGCCTACCGTCAACCAGACACAGGTATT...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
||
| CDS-3UTR CAA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACACTGAAACCACGTCGTTaGGCTTCTTCCCAGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDLHHHIQTHALLLHYATLKPRR*ASSQPS Trigger: TGAGGGCTGGGAAGAAGCCAAACGACGTGGTTTCAG...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 90 bp | CCGTCCTGTGACCGTGGTGGCAAGTTCCTTGGAGTAGCCTTTTCTTaGGTTTTGATCAAGTCTAGAATAGCTGACAGTACTGCACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSCDRGGKFLGVAFS*VLIKSRIADSTAQS Trigger: AGACTGTGCAGTACTGTCAGCTATTCTAGACTTGATCAAAACTCAAGAAAAGGCTACTCCAAGGAACTTGCCACCACGGTCACAGGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 90 bp | TCTTTGTCAGTCTTAGCTTGGACTGAATTCAGCAGCTGCACAATTTaGTCTTCTCGACGTTCATCCATGTGCACTACAGCTCTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSVLAWTEFSSCTI*SSRRSSMCTTALSC Trigger: GCAGGAGAGAGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACCTCCCTTTCCTCTGTTaGGCATTAGCTTTACTAACC | + |
|
Preference number: 5 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNLPFLC*ALALLT Trigger: GGTTAGTAAAGCTAATGCCAAACAGAGGAAAGGGAG...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTGCACCACTGCCTCATTaGATGGTGGATCCATTAATC | + |
|
Preference number: 5 (lower is better) Translates to: IGSKSMAVLCICPGHLTTAPLPH*MVDPLI Trigger: GATTAATGGATCCACCATCAAATGAGGCAGTGGTGC...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | ATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACTTGCATGAAACCCCTCTaGAACTGGGATCTATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGSKSMAVLCICPGHLTTCMKPL*NWDLCS Trigger: AGAACATAGATCCCAGTTCAAGAGGGGTTTCATGCA...AGTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | CATCGGCAGCAAATCCATGGCAGTGCTATGCATATGTCCTGGTCATCTCACAACGTAGAAAGACCAATATaGCACCATCCTCTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRQQIHGSAMHMSWSSHNVERPI*HHPLLP Trigger: TGGAAGAAGAGGATGGTGCAATATTGGTCTTTCTAC...GTTGTGAGATGACCAGGACATATGCATAGCACTGCCATGGATTTGCTGCCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 90 bp | AGTACTGCACAGTCTCTTGACTTAGTGTCGTCCCAGTCTACAGGATaGGGGCTTTCAATCTTCTCTTGTAGAAGGCTATCCAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STAQSLDLVSSQSTG*GLSIFSCRRLSSSF Trigger: AAAGGAACTGGATAGCCTTCTACAAGAGAAGATTGAAAGCCCTCATCCTGTAGACTGGGACGACACTAAGTCAAGAGACTGTGCAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 90 bp | GCTTCTGAATCTTTGTCAGTCTTAGCTTGGACTGAATTCAGCAGCTaGACAATTTGCTCTTCTCGACGTTCATCCATGTGCACTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASESLSVLAWTEFSS*TICSSRRSSMCTTA Trigger: AGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAAAGATTCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CCA 90 bp | GCAAACCAGGATATCTGCGCTTCTGAATCTTTGTCAGTCTTAGCTTaGACTGAATTCAGCAGCTGCACAATTTGCTCTTCTCGACGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ANQDICASESLSVLA*TEFSSCTICSSRRS Trigger: TGAACGTCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAAAGATTCAGAAGCGCAGATATCCTGGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 90 bp | TGTTCGAAGACAGAAAATATTCCCAGCAGTAGTCCTTTTCATACCTaGAACCACGTCGTTTGGCTTCTTCCCAGCCCTCAAATGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSKTENIPSSSPFHT*NHVVWLLPSPQMHS Trigger: TGAATGCATTTGAGGGCTGGGAAGAAGCCAAACGACGTGGTTTCAGGTATGAAAAGGACTACTGCTGGGAATATTTTCTGTCTTCGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTTGCAAAGTACTGATATaGTCCCAGCCTGGTAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGNVLHEDCGVGYTISHSCKVLI*SQPGRK Trigger: CTTTCTACCAGGCTGGGACAATATCAGTACTTTGCA...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACAGACATGGTACTGATGTaGTTCTGTGTGTCAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QDLHHHIQTHALLLHYATDMVLM*FCVSKC Trigger: ACACTTTGACACACAGAACAACATCAGTACCATGTC...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 90 bp | ATCAACTTTATCATCATCCATCATTTGCAAAACATCTACGGTACTTaGAGAGTATCTTGTCCGCAGTTCCTTTATATACGCTGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: INFIIIHHLQNIYGT*RVSCPQFLYIRWPA Trigger: CGCTGGCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATGATAAAGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CCA 90 bp | AGAATCATTTTTCCAATATGTGGCTCAACAGGCAGTCGGGCTAAATaGACACCAAGAGGTGTTAATTCTTCTTGCTTATCCAAAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RIIFPICGSTGSRAK*TPRGVNSSCLSKAL Trigger: GAGTGCTTTGGATAAGCAAGAAGAATTAACACCTCTTGGTGTCCATTTAGCCCGACTGCCTGTTGAGCCACATATTGGAAAAATGATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 90 bp | TTTCTGGATGGAAATATCTCCTCCAAAGAACAGGAGGCAGTATGGTaGCACTTCTGTACAGTCGTACAAGTATATACTGCTTGTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLDGNISSKEQEAVW*HFCTVVQVYTACSH Trigger: ATGAGAACAAGCAGTATATACTTGTACGACTGTACAGAAGTGTCACCATACTGCCTCCTGTTCTTTGGAGGAGATATTTCCATCCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 90 bp | AGGGCAGCAATCAAATTCAGATCAACTTTATCATCATCCATCATTTaGAAAACATCTACGGTACTTGCAGAGTATCTTGTCCGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAAIKFRSTLSSSII*KTSTVLAEYLVRSS Trigger: GGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATGATAAAGTTGATCTGAATTTGATTGCTGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CCA 90 bp | ATTCTTCTTGCTTATCCAAAGCACTCAGTTCCATTAGGTGTTTTATaGAGAGCACCACTGCCTCATTTGATGGTGGATCCATTAATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILLAYPKHSVPLGVL*RAPLPHLMVDPLIY Trigger: GTAGATTAATGGATCCACCATCAAATGAGGCAGTGGTGCTCTCCATAAAACACCTAATGGAACTGAGTGCTTTGGATAAGCAAGAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | GATGGGAATGTTCTACATGAAGACTGCGGTGTTGGCTACACAATTTCACACAGTCCTCAAGATCTTTATTaGCAAACAGAGTTCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DGNVLHEDCGVGYTISHSPQDLY*QTEFFQ Trigger: TTGGAAGAACTCTGTTTGCAAATAAAGATCTTGAGG...ACTGTGTGAAATTGTGTAGCCAACACCGCAGTCTTCATGTAGAACATTCCCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | CAGGACCTTCATCATCACATCCAGACACATGCTCTGTTGCTACATTATGCTACAACAAGTATATACTGCTaGTTCTCATCTTCAGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QDLHHHIQTHALLLHYATTSIYC*FSSSGD Trigger: ATCACCTGAAGATGAGAACAAGCAGTATATACTTGT...TGTAGCATAATGTAGCAACAGAGCATGTGTCTGGATGTGATGATGAAGGTCCTG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS-3UTR CAA 90 bp | TCCATGCTTATATTAAATGAAAAAGGCTGGACACATGGACTGTGTGAATCCATTCGGATTTTAGCAACTTaGGGATATAAACCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SMLILNEKGWTHGLCESIRILAT*GYKPAQ Trigger: CTGTGCTGGTTTATATCCCAAAGTTGCTAAAATCCG...AATGGATTCACACAGTCCATGTGTCCAGCCTTTTTCATTTAATATAAGCATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 72 bp | CTCTCCTGCCTCTCAGCCTCCTTGTTCTTCTGCGTCTaGTTCTTGGCGTACCACAGGCCGATCTCGCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSCLSASLFFCV*FLAYHRPISRP Trigger: GGGTCGCGAGATCGGCCTGTGGTACGCCAAGAAGCAGACGCAGAAGAACAAGGAGGCTGAGAGGCAGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 72 bp | AGCTGCACAATTTGCTCTTCTCGACGTTCATCCATGTaGACTACAGCTCTCTCCTGCCTCTCAGCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCTICSSRRSSM*TTALSCLSASL Trigger: CAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | CTCTCAGCGACTGAAATGGCACTAATTCTTCTCGGCTaGGTACACACTATTCTGCAGGCAGACCCTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSATEMALILLG*VHTILQADPFP Trigger: AGGAAAAGGGTCTGCCTGCAGAATAGTGTGTACTCAGCCGAGAAGAATTAGTGCCATTTCAGTCGCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 72 bp | GTCTTAGCTTGGACTGAATTCAGCAGCTGCACAATTTaGTCTTCTCGACGTTCATCCATGTGCACTACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLAWTEFSSCTI*SSRRSSMCTTA Trigger: AGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 72 bp | TCAGGAGCAAACCAGGATATCTGCGCTTCTGAATCTTaGTCAGTCTTAGCTTGGACTGAATTCAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGANQDICASES*SVLAWTEFSSC Trigger: GCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAAAGATTCAGAAGCGCAGATATCCTGGTTTGCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | ACAGAAAATATTCCCAGCAGTAGTCCTTTTCATACCTaGAACCACGTCGTTTGGCTTCTTCCCAGCCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: TENIPSSSPFHT*NHVVWLLPSPQ Trigger: TTGAGGGCTGGGAAGAAGCCAAACGACGTGGTTTCAGGTATGAAAAGGACTACTGCTGGGAATATTTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS GCA 72 bp | TCTTTGTCAGTCTTAGCTTGGACTGAATTCAGCAGCTaGACAATTTGCTCTTCTCGACGTTCATCCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSVLAWTEFSS*TICSSRRSSMC Trigger: GCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGCTGCTGAATTCAGTCCAAGCTAAGACTGACAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CCA 72 bp | TGCAGAGTATCTTGTCCGCAGTTCCTTTATATACGCTaGCCAGCGTTCCTTATAGATGGCCTCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRVSCPQFLYIR*PAFLIDGLFFF Trigger: GAAGAAAAAGAGGCCATCTATAAGGAACGCTGGCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CCA 72 bp | GCTTATCCAAAGCACTCAGTTCCATTAGGTGTTTTATaGAGAGCACCACTGCCTCATTTGATGGTGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AYPKHSVPLGVL*RAPLPHLMVDP Trigger: TGGATCCACCATCAAATGAGGCAGTGGTGCTCTCCATAAAACACCTAATGGAACTGAGTGCTTTGGATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | CTAACACTGGACAAACGTGAGTCGGACTGGAGCCACTaGAGAATGATTCCTGTTGTGCAGTATAAGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTLDKRESDWSH*RMIPVVQYKIE Trigger: TTCTATCTTATACTGCACAACAGGAATCATTCTTCAGTGGCTCCAGTCCGACTCACGTTTGTCCAGTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | GACCGTGGTGGCAAGTTCCTTGGAGTAGCCTTTTCTTaGGTTTTGATCAAGTCTAGAATAGCTGACAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: DRGGKFLGVAFS*VLIKSRIADST Trigger: AGTACTGTCAGCTATTCTAGACTTGATCAAAACTCAAGAAAAGGCTACTCCAAGGAACTTGCCACCACGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 72 bp | TCATTTGCAAAACATCTACGGTACTTGCAGAGTATCTaGTCCGCAGTTCCTTTATATACGCTGGCCAGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SFAKHLRYLQSI*SAVPLYTLASV Trigger: AACGCTGGCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 72 bp | ACCACATCATCTATGGTGATGCTAGTCTCTGCAATGTaGGTAGCAATTACTATTTTCCGAACACCGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TTSSMVMLVSAM*VAITIFRTPGG Trigger: TCCTCCCGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCAGAGACTAGCATCACCATAGATGATGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 90 bp | CATCATCCATCATTTGCAAAACATCTACGGTACTTGCAGAGTATCTaGTCCGCAGTTCCTTTATATACGCTGGCCAGCGTTCCTTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: HHPSFAKHLRYLQSI*SAVPLYTLASVPYR Trigger: TCTATAAGGAACGCTGGCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | GGAAATATCTCCTCCAAAGAACAGGAGGCAGTATGGTaGCACTTCTGTACAGTCGTACAAGTATATACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GNISSKEQEAVW*HFCTVVQVYTA Trigger: AGCAGTATATACTTGTACGACTGTACAGAAGTGTCACCATACTGCCTCCTGTTCTTTGGAGGAGATATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 90 bp | GATCAACTTTATCATCATCCATCATTTGCAAAACATCTACGGTACTaGCAGAGTATCTTGTCCGCAGTTCCTTTATATACGCTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DQLYHHPSFAKHLRY*QSILSAVPLYTLAS Trigger: GCTGGCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATGATAAAGTTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS TCA 72 bp | TTGCCACAACCAGTTTCACCACTTATTACTGTCACCTaGTGGTTATTGATTAGATTTACCAGCTCCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPQPVSPLITVT*WLLIRFTSSFC Trigger: GCAGAAGGAGCTGGTAAATCTAATCAATAACCATCAGGTGACAGTAATAAGTGGTGAAACTGGTTGTGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 72 bp | ACTTGTGACATCAAGAGATCATGCAAAGTACTGATATaGTCCCAGCCTGGTAGAAAGACCAATATTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TCDIKRSCKVLI*SQPGRKTNIAP Trigger: TGGTGCAATATTGGTCTTTCTACCAGGCTGGGACAATATCAGTACTTTGCATGATCTCTTGATGTCACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 90 bp | CACTCAGTTCCATTAGGTGTTTTATGGAGAGCACCACTGCCTCATTaGATGGTGGATCCATTAATCTACTCAGAAAATAAGCAATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HSVPLGVLWRAPLPH*MVDPLIYSENKQFH Trigger: GTGGAATTGCTTATTTTCTGAGTAGATTAATGGATCCACCATCAAATGAGGCAGTGGTGCTCTCCATAAAACACCTAATGGAACTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 90 bp | TTAAACATCACTTGTGACATCAAGAGATCATGCAAAGTACTGATATaGTCCCAGCCTGGTAGAAAGACCAATATTGCACCATCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNITCDIKRSCKVLI*SQPGRKTNIAPSSS Trigger: AGAAGAGGATGGTGCAATATTGGTCTTTCTACCAGGCTGGGACAATATCAGTACTTTGCATGATCTCTTGATGTCACAAGTGATGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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| CDS CAA 72 bp | CCATTAGGTGTTTTATGGAGAGCACCACTGCCTCATTaGATGGTGGATCCATTAATCTACTCAGAAAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLGVLWRAPLPH*MVDPLIYSENK Trigger: CTTATTTTCTGAGTAGATTAATGGATCCACCATCAAATGAGGCAGTGGTGCTCTCCATAAAACACCTAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029336.6 |
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