RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX34 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006019

Ensembl transcript IDs: ENSMUST00000094816.3, ENSMUST00000118795.8, ENSMUST00000119102.8, ENSMUST00000121123.8, ENSMUST00000163968.8

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTaGATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: EGEGGTGPEAKPDFI*MDTLLSPTWALQEQ
Trigger: CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
3UTR CCA 90 bp GTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATaGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCT +
Preference number: 1 (lower is better)
Translates to: VREAQVLKQSLTLFA*THCCPPLGRSRSSA
Trigger: AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
3UTR GCA 72 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTaGATGGACACACTGCTGTCCCCCACTTGGGCGCTC +
Preference number: 3 (lower is better)
Translates to: GGTGPEAKPDFI*MDTLLSPTWAL
Trigger: GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
3UTR CCA 72 bp GCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATaGACACACTGCTGTCCCCCACTTGGGCGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: AQVLKQSLTLFA*THCCPPLGRSR
Trigger: CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
3UTR GCA 72 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTaGTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: LKQSLTLFAWTH*CPPLGRSRSSA
Trigger: AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGGACCCGATGGGGGTaGGGGCCTCCGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWGTRWG*GPPSCP
Trigger: TGGACAGCTCGGAGGCCCTCACCCCCATCGGGTCCC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWAWRAS*RSRALS
Trigger: GGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGACCCGATGGGGGTaGGGGCCTCCGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGTRWG*GPPSCP
Trigger: TGGACAGCTCGGAGGCCCTCACCCCCATCGGGTCCC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGARAPA*AGPVGL
Trigger: GAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGCTCCCTTCTTGGCCTaGGGCCTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGAPFLA*GLLPLC
Trigger: ACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCAGCCTCCCAGGCACCTaGACCACCGGAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGSLPGT*TTGAWL
Trigger: CAGCCATGCTCCGGTGGTGCAGGTGCCTGGGAGGCT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGAGCCGCAGGGATGTTaGCAGGAGCCGGACGGCACT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGEPQGC*QEPDGT
Trigger: AGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGGTCCTGGGCTGAGCTaGCAGCTGCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGGPGLS*QLPAAA
Trigger: AGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTTCCGTCGCTGGGCCTaGCGGGCCAGCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEFRRWA*RASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTTCCGTCGCTGGGCCTaGCGGGCCAGCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVFRRWA*RASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGGGACCCGATGGGGGTaGGGGCCTCCGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRGTRWG*GPPSCP
Trigger: TGGACAGCTCGGAGGCCCTCACCCCCATCGGGTCCC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTGGGCGATGGGAAGTaGCGCTCGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWLGDGK*RSLTLQ
Trigger: CTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAG...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGCCTCCCAGGCACCTaGACCACCGGAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWSLPGT*TTGAWL
Trigger: CAGCCATGCTCCGGTGGTGCAGGTGCCTGGGAGGCT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGHPGPP*GFPGLG
Trigger: ACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATG...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVAGAGP*ALGAAA
Trigger: TGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRAGAGP*ALGAAA
Trigger: TGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCAGAGP*ALGAAA
Trigger: TGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEAGAGP*ALGAAA
Trigger: TGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGAGCAGCCATCCTCCTaGAGCCTCAGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGEQPSS*SLSTLR
Trigger: GCGCAAGGTGCTGAGGCTGCAGGAGGATGGCTGCTC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQAWRAS*RSRALS
Trigger: GGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEAWRAS*RSRALS
Trigger: GGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWGTGAG*AHAGSG
Trigger: GCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTTGAGGTCAGGCCGCTaGGGCAGCAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLLRSGR*GSRRCR
Trigger: CCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCCTGGGGCCACTACCTaGGCCCCACTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGPGATT*APLSNP
Trigger: TGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTTCCGTCGCTGGGCCTaGCGGGCCAGCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSFRRWA*RASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLARAPA*AGPVGL
Trigger: GAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCCACCTCCTGGGGGCTaGCTGCTGGAGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLPPPGG*LLETPC
Trigger: ACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGG...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGAACCTTGGCCACCATaGACTGCAGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGEPWPP*TAAAPC
Trigger: GCAGGGAGCTGCTGCAGTTCATGGTGGCCAAGGTTC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWGPLQG*CLLWWC
Trigger: GCACCACCACAGAAGACATCAGCCCTGCAGAGGCCC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGCTCGGCCCTTGCGCTaGTCAGCACTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEARPLR*SALAWL
Trigger: CAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGCTCGGCCCTTGCGCTaGTCAGCACTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVARPLR*SALAWL
Trigger: CAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGCTCGGCCCTTGCGCTaGTCAGCACTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSARPLR*SALAWL
Trigger: CAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGCTCGGCCCTTGCGCTaGTCAGCACTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQARPLR*SALAWL
Trigger: CAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWHPGPP*GFPGLG
Trigger: ACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATG...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGGTGAGCACAGGCTCTaGCAGGCTGAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGGEHRL*QAEHGA
Trigger: GGCTCCATGTTCAGCCTGGCAGAGCCTGTGCTCACC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGAGCTGGCAGCTGCCTaGAGCTGCTCCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWELAAA*SCSRLC
Trigger: GCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGCSTVP*LACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCA...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSAWRAS*RSRALS
Trigger: GGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALAWRAS*RSRALS
Trigger: GGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGC...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTTGAGGTCAGGCCGCTaGGGCAGCAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRLRSGR*GSRRCR
Trigger: CCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTGCTGTCGCTTCAGCTaGTGCAGGGCCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWCCRFS*CRALRS
Trigger: AGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCAGGGCACTTTCCCAGTaGACACGGAGCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGRALSQ*TRSRRD
Trigger: ATCCCTGCGGCTCCGTGTCCACTGGGAAAGTGCCCT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTTCCGTCGCTGGGCCTaGCGGGCCAGCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRFRRWA*RASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTCTCGGTCTCGGTaGCCCCTCCCCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCWSRSR*PLPSLV
Trigger: GACAAGGGAGGGGAGGGGTCACCGAGACCGAGACCA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGGTCTCGGTCTCGGTaGCCCCTCCCCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRWSRSR*PLPSLV
Trigger: GACAAGGGAGGGGAGGGGTCACCGAGACCGAGACCA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGTCTCGGTCTCGGTaGCCCCTCCCCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQWSRSR*PLPSLV
Trigger: GACAAGGGAGGGGAGGGGTCACCGAGACCGAGACCA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGAHAAV*RASQKP
Trigger: AGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGGCAGCAGCAATGGTaGGCACAGGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVGQQQW*AQALPG
Trigger: GCCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGGGCAGCAGCAATGGTaGGCACAGGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCGQQQW*AQALPG
Trigger: GCCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGGGCAGCAGCAATGGTaGGCACAGGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSGQQQW*AQALPG
Trigger: GCCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGCTCCCTTCTTGGCCTaGGGCCTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCAPFLA*GLLPLC
Trigger: ACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCACCTCCTGGGGGCTaGCTGCTGGAGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVPPPGG*LLETPC
Trigger: ACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGG...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGCCACCTCCTGGGGGCTaGCTGCTGGAGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQPPPGG*LLETPC
Trigger: ACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGG...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGFLPTEGEGGTGPEAKPGPLQG*CLLWWC
Trigger: GCACCACCACAGAAGACATCAGCCCTGCAGAGGCCC...AGGCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCTGGGCGATGGGAAGTaGCGCTCGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSLGDGK*RSLTLQ
Trigger: CTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAG...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCTGGGCGATGGGAAGTaGCGCTCGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCLGDGK*RSLTLQ
Trigger: CTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCTTGGCCAGTGAGATaGAGGCGATTCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWAWPVR*RRFSGA
Trigger: AGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGCCTCCCAGGCACCTaGACCACCGGAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSLPGT*TTGAWL
Trigger: CAGCCATGCTCCGGTGGTGCAGGTGCCTGGGAGGCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCATCTGAAGCACCAGTaGATCCAGGGCCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWHLKHQ*IQGHPA
Trigger: CGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATG...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGTGAGCACAGGCTCTaGCAGGCTGAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWGEHRL*QAEHGA
Trigger: GGCTCCATGTTCAGCCTGGCAGAGCCTGTGCTCACC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAAGAGP*ALGAAA
Trigger: TGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLSAPCA*VPHPPH
Trigger: ATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGCAGCCATCCTCCTaGAGCCTCAGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLEQPSS*SLSTLR
Trigger: GCGCAAGGTGCTGAGGCTGCAGGAGGATGGCTGCTC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCGAGCTGGCAGCTGCCTaGAGCTGCTCCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RLGFFPLRVREAQVLKQSELAAA*SCSRLC
Trigger: GCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTC...GCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGGGGTGCAGCACGGTaGCCTGCTTGGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSWGAAR*PAWPAC
Trigger: ACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGGTGCAGCACGGTaGCCTGCTTGGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQWGAAR*PAWPAC
Trigger: ACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGGGGTGCAGCACGGTaGCCTGCTTGGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRWGAAR*PAWPAC
Trigger: ACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGAGCCGCAGGGATGTTaGCAGGAGCCGGACGGCACT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVEPQGC*QEPDGT
Trigger: AGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGCCTCTTCCTCCCTaGGAGCTCGATGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGPLPP*ELDGGL
Trigger: GAGACCACCATCGAGCTCCCAGGGAGGAAGAGGCCC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCGSRWI*RRSSPT
Trigger: GGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAGSRWI*RRSSPT
Trigger: GGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVGSRWI*RRSSPT
Trigger: GGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLRLGSR*IWRRSS
Trigger: GCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCT...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGTGAG*AHAGSG
Trigger: GCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVGTGAG*AHAGSG
Trigger: GCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTTGAGGTCAGGCCGCTaGGGCAGCAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALLRSGR*GSRRCR
Trigger: CCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGVKGSP*SLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCAC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGTCCTGGGCTGAGCTaGCAGCTGCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGPGLS*QLPAAA
Trigger: AGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTCTCGGGTCAGGTCCTaGGCTGAGCTGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRSRVRS*AELAAA
Trigger: GGCAGCTGCCAGCTCAGCCCAGGACCTGACCCGAGA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGCACGGTGCCCTGCTTaGCCTGCGTGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGARCPA*PACGKS
Trigger: AGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLSWLPS*PEASCP
Trigger: GGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAACAGCAGGAGGGACTaGAGGGCCGGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWNSRRD*RAGILT
Trigger: CGTCAGAATCCCGGCCCTCCAGTCCCTCCTGCTGTT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTTCCGTCGCTGGGCCTaGCGGGCCAGCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGFRRWA*RASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAA...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTGGTCTCGGTCTCGGTaGCCCCTCCCCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALWSRSR*PLPSLV
Trigger: GACAAGGGAGGGGAGGGGTCACCGAGACCGAGACCA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWAHAAV*RASQKP
Trigger: AGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGSHTD*GSRSQR
Trigger: GCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGAGGGCCGGGATTCTaGCGCAGTTCACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGGPGF*RSSPGM
Trigger: CATACCTGGTGAACTGCGTCAGAATCCCGGCCCTCC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTGTCAATGGAGCGGCTaGACAGCAGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWCQWSG*TAGGTG
Trigger: TCCAGTCCCTCCTGCTGTTCAGCCGCTCCATTGACA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCCACCTCCTGGGGGCTaGCTGCTGGAGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALPPPGG*LLETPC
Trigger: ACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGG...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCCCACCTCCTGGGGGCTaGCTGCTGGAGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSPPPGG*LLETPC
Trigger: ACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGG...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAACCTTGGCCACCATaGACTGCAGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLEPWPP*TAAAPC
Trigger: GCAGGGAGCTGCTGCAGTTCATGGTGGCCAAGGTTC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTGGGAGGTCTTGAGGTaGTGGAATCTCTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGWEVLR*WNLCRR
Trigger: ACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCA...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGCTGGGCGATGGGAAGTaGCGCTCGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQLGDGK*RSLTLQ
Trigger: CTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAG...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTAGCCTCCCAGGCACCTaGACCACCGGAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSSLPGT*TTGAWL
Trigger: CAGCCATGCTCCGGTGGTGCAGGTGCCTGGGAGGCT...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAATTCCTGCAGCCGCTaGAGTTTGGCCTGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWNSCSR*SLACGS
Trigger: CGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQHPGPP*GFPGLG
Trigger: ACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATG...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGTGAGCACAGGCTCTaGCAGGCTGAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGEHRL*QAEHGA
Trigger: GGCTCCATGTTCAGCCTGGCAGAGCCTGTGCTCACC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGATCTCATACAGCCGGTaGTCCTCCACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEISYSR*SSTPRR
Trigger: CCGCCGGGGTGTGGAGGAGCACCGGCTGTATGAGAT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGATCTCATACAGCCGGTaGTCCTCCACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQISYSR*SSTPRR
Trigger: CCGCCGGGGTGTGGAGGAGCACCGGCTGTATGAGAT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCSAPCA*VPHPPH
Trigger: ATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESAPCA*VPHPPH
Trigger: ATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGAGCAGCCATCCTCCTaGAGCCTCAGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCEQPSS*SLSTLR
Trigger: GCGCAAGGTGCTGAGGCTGCAGGAGGATGGCTGCTC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGGAGCAGCCATCCTCCTaGAGCCTCAGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKEQPSS*SLSTLR
Trigger: GCGCAAGGTGCTGAGGCTGCAGGAGGATGGCTGCTC...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGCAGCTGCCTGCAGCTaGTCCAGGTTGTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVAAACS*SRLCRS
Trigger: GCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGCAGCTGCCTGCAGCTaGTCCAGGTTGTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSAAACS*SRLCRS
Trigger: GCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGAGCTGGCAGCTGCCTaGAGCTGCTCCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEELAAA*SCSRLC
Trigger: GCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGCCGCAGGGATGTTaGCAGGAGCCGGACGGCACT +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSEPQGC*QEPDGT
Trigger: AGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCGCAGGGATGTTaGCAGGAGCCGGACGGCACT +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQEPQGC*QEPDGT
Trigger: AGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCACTGCAGCAGCTCCCTaGTCAGAGCAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RLGFFPLRVREAQVLKQSTAAAP*SEQPPP
Trigger: AGGAGGTGGCTGCTCTGAGCAGGGAGCTGCTGCAGT...GCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGCAGCCTCAGACTTaGCTGGATCATCGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLEQPQT*LDHRLA
Trigger: CGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCCTCTTCCTCCCTaGGAGCTCGATGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAGPLPP*ELDGGL
Trigger: GAGACCACCATCGAGCTCCCAGGGAGGAAGAGGCCC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGATGCGGTTCCCATACTaGGCGATGGGAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWMRFPY*AMGSAA
Trigger: AGCGGCACTTCCCATCGCCCAGTATGGGAACCGCAT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALGSRWI*RRSSPT
Trigger: GGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCC...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSGSRWI*RRSSPT
Trigger: GGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRRLGSR*IWRRSS
Trigger: GCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKRLGSR*IWRRSS
Trigger: GCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCT...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQGTGAG*AHAGSG
Trigger: GCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSGTGAG*AHAGSG
Trigger: GCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESTIRT*YWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSTIRT*YWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSSTIRT*YWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTTGAGGTCAGGCCGCTaGGGCAGCAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRLRSGR*GSRRCR
Trigger: CCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWVKGSP*SLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCAC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTACTGGCGCCGCAGGTTaGCCATCTCATACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGFLPTEGEGGTGPEAKPTGAAG*PSHTAG
Trigger: ACCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGT...AGGCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAACAGCTCCTTGAACTaGCGCCGCAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWNSSLN*RRRLAI
Trigger: GATGGCCAACCTGCGGCGCCAGTTCAAGGAGCTGTT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCTGGGGCCACTACCTaGGCCCCACTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEPGATT*APLSNP
Trigger: TGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCCTGGGGCCACTACCTaGGCCCCACTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSPGATT*APLSNP
Trigger: TGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGCTGTCGCTTCAGCTaGTGCAGGGCCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSCCRFS*CRALRS
Trigger: AGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGCTGTCGCTTCAGCTaGTGCAGGGCCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSACCRFS*CRALRS
Trigger: AGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGGTCCTCTTCATCGCTaGAGCAGCCATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWGPLHR*SSHPPA
Trigger: TGCAGGAGGATGGCTGCTCCAGCGATGAAGAGGACC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGGTCCTGGGCTGAGCTaGCAGCTGCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSGPGLS*QLPAAA
Trigger: AGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCACGGTGCCCTGCTTaGCCTGCGTGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWARCPA*PACGKS
Trigger: AGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVSWLPS*PEASCP
Trigger: GGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSWLPS*PEASCP
Trigger: GGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGAGCAGCCACCTCCTaGGGGCTGACTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQRAATS*GLTAGD
Trigger: GTCTCCAGCAGTCAGCCCCCAGGAGGTGGCTGCTCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTAGAGCAGCCACCTCCTaGGGGCTGACTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSARAATS*GLTAGD
Trigger: GTCTCCAGCAGTCAGCCCCCAGGAGGTGGCTGCTCT...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAGCAGCCACCTCCTaGGGGCTGACTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRRAATS*GLTAGD
Trigger: GTCTCCAGCAGTCAGCCCCCAGGAGGTGGCTGCTCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCGTGCAGGCCACAGTGTaGGCAGGTCCAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: RLGFFPLRVREAQVLKQSVQATV*AGPEGT
Trigger: CGTTCCTTCTGGACCTGCCCACACTGTGGCCTGCAC...GCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGCCTCCTCAGACCCTaGATCATCGCCTGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSSLLRP*IIAWRL
Trigger: GAGGCGCCAGGCGATGATCCAGGGTCTGAGGAGGCT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCAGCGTGGGTCGTAAGTaGGAGGTAGGTCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGSVGRK*EVGQLK
Trigger: CTTTAGCTGACCTACCTCTCACTTACGACCCACGCT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLAHAAV*RASQKP
Trigger: AGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCNALGQ*DAGDSP
Trigger: CGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCG +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVNALGQ*DAGDSP
Trigger: CGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEGSHTD*GSRSQR
Trigger: GCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRGSHTD*GSRSQR
Trigger: GCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSGSHTD*GSRSQR
Trigger: GCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTGGGTCCAGCTTCTCTaGCTTGGATGCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWWVQLL*LGCCLV
Trigger: GACCAGACAGCATCCAAGTCAGAGAAGCTGGACCCA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGGGCAGCAGCAATGGTaGGCACAGGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRGQQQW*AQALPG
Trigger: GCCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCCACTCAGCAATCCATaGTCCTCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGPLSNP*SSNSSL
Trigger: CAAGGAGCTGTTGGAGGATCATGGATTGCTGAGTGG...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRARAPA*AGPVGL
Trigger: GAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGCTCCCTTCTTGGCCTaGGGCCTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAAPFLA*GLLPLC
Trigger: ACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWTKASS*CLQLIW
Trigger: CCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGAGGGCCGGGATTCTaGCGCAGTTCACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGGPGF*RSSPGM
Trigger: CATACCTGGTGAACTGCGTCAGAATCCCGGCCCTCC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGGGCCGGGATTCTaGCGCAGTTCACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAGGPGF*RSSPGM
Trigger: CATACCTGGTGAACTGCGTCAGAATCCCGGCCCTCC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGAACCTTGGCCACCATaGACTGCAGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVEPWPP*TAAAPC
Trigger: GCAGGGAGCTGCTGCAGTTCATGGTGGCCAAGGTTC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGFLPTEGEGGTGPEAKPGQVFS*AMRSKG
Trigger: ACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCC...AGGCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSGPLQG*CLLWWC
Trigger: GCACCACCACAGAAGACATCAGCCCTGCAGAGGCCC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGCTTGGCCAGTGAGATaGAGGCGATTCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCAWPVR*RRFSGA
Trigger: AGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGCTTGGCCAGTGAGATaGAGGCGATTCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQAWPVR*RRFSGA
Trigger: AGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWWLPTE*FQSGSG
Trigger: ACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGISLG*VQHRGD
Trigger: ATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVGISLG*VQHRGD
Trigger: ATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKGISLG*VQHRGD
Trigger: ATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCC...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCATCTGAAGCACCAGTaGATCCAGGGCCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRHLKHQ*IQGHPA
Trigger: CGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATG...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCATCTGAAGCACCAGTaGATCCAGGGCCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCHLKHQ*IQGHPA
Trigger: CGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGGTGAGCACAGGCTCTaGCAGGCTGAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEGEHRL*QAEHGA
Trigger: GGCTCCATGTTCAGCCTGGCAGAGCCTGTGCTCACC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGATCTCATACAGCCGGTaGTCCTCCACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQISYSR*SSTPRR
Trigger: CCGCCGGGGTGTGGAGGAGCACCGGCTGTATGAGAT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQSAPCA*VPHPPH
Trigger: ATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGA...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCGCAGCTGCCTGCAGCTaGTCCAGGTTGTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALAAACS*SRLCRS
Trigger: GCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGC...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAGCTGCCTGCAGCTaGTCCAGGTTGTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSAAACS*SRLCRS
Trigger: GCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGAGCTGGCAGCTGCCTaGAGCTGCTCCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSELAAA*SCSRLC
Trigger: GCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGTGCCCTGCTTGGCCTaGGTGTGGAAAATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWVPCLA*VWKIWS
Trigger: AGACCAGATTTTCCACACGCAGGCCAAGCAGGGCAC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCCSTVP*LACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQECSTVP*LACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSACSTVP*LACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGGGGTGCAGCACGGTaGCCTGCTTGGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRWGAAR*PAWPAC
Trigger: ACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGAGCCGCAGGGATGTTaGCAGGAGCCGGACGGCACT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAEPQGC*QEPDGT
Trigger: AGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGACTGCAGCAGCTCCCTaGTCAGAGCAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRTAAAP*SEQPPP
Trigger: AGGAGGTGGCTGCTCTGAGCAGGGAGCTGCTGCAGT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGAGCAGCCTCAGACTTaGCTGGATCATCGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCEQPQT*LDHRLA
Trigger: CGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTCCCATACTGGGCGATaGGAAGTGCCGCTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESHTGR*EVPLAH
Trigger: GTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTCCCATACTGGGCGATaGGAAGTGCCGCTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVSHTGR*EVPLAH
Trigger: GTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGATGCGGTTCCCATACTaGGCGATGGGAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLMRFPY*AMGSAA
Trigger: AGCGGCACTTCCCATCGCCCAGTATGGGAACCGCAT...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCGAAGCCAACGCGCTTaGCCAGTGAGATGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCRSQRA*PVRCRR
Trigger: TCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGCGAAGCCAACGCGCTTaGCCAGTGAGATGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQRSQRA*PVRCRR
Trigger: TCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCG...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGAAGCCAACGCGCTTaGCCAGTGAGATGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQERSQRA*PVRCRR
Trigger: TCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCG...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCGAAGCCAACGCGCTTaGCCAGTGAGATGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSRSQRA*PVRCRR
Trigger: TCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCG...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSRLGSR*IWRRSS
Trigger: GCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCT...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQRLGSR*IWRRSS
Trigger: GCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSSTIRT*YWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTTGAGGTCAGGCCGCTaGGGCAGCAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWLRSGR*GSRRCR
Trigger: CCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCTGCAGTTTGGCCTGTaGGTCGTAGCTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGLQFGL*VVAHLL
Trigger: AAGGAGATGAGCTACGACCCACAGGCCAAACTGCAG...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCACTGGCGCCGCAGGTTaGCCATCTCATACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSTGAAG*PSHTAG
Trigger: ACCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGACTGGCGCCGCAGGTTaGCCATCTCATACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRTGAAG*PSHTAG
Trigger: ACCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGAACAGCTCCTTGAACTaGCGCCGCAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLNSSLN*RRRLAI
Trigger: GATGGCCAACCTGCGGCGCCAGTTCAAGGAGCTGTT...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGGTCCTGGGCTGAGCTaGCAGCTGCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRGPGLS*QLPAAA
Trigger: AGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEWQRHR*GAARCP
Trigger: AGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSWQRHR*GAARCP
Trigger: AGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAWQRHR*GAARCP
Trigger: AGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALSWLPS*PEASCP
Trigger: GGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAACAGCAGGAGGGACTaGAGGGCCGGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQENSRRD*RAGILT
Trigger: CGTCAGAATCCCGGCCCTCCAGTCCCTCCTGCTGTT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAACAGCAGGAGGGACTaGAGGGCCGGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVNSRRD*RAGILT
Trigger: CGTCAGAATCCCGGCCCTCCAGTCCCTCCTGCTGTT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAACAGCAGGAGGGACTaGAGGGCCGGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSNSRRD*RAGILT
Trigger: CGTCAGAATCCCGGCCCTCCAGTCCCTCCTGCTGTT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGGGCACTTTCCCAGTaGACACGGAGCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQRALSQ*TRSRRD
Trigger: ATCCCTGCGGCTCCGTGTCCACTGGGAAAGTGCCCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGGCACTTTCCCAGTaGACACGGAGCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRRALSQ*TRSRRD
Trigger: ATCCCTGCGGCTCCGTGTCCACTGGGAAAGTGCCCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGGGCACTTTCCCAGTaGACACGGAGCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVRALSQ*TRSRRD
Trigger: ATCCCTGCGGCTCCGTGTCCACTGGGAAAGTGCCCT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCCCCTTGGTGGGGTGTaGAGACAGGGTAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWPLGGV*RQGRIS
Trigger: GGAAATTCTACCCTGTCTCCACACCCCACCAAGGGG...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGTGCAGGCCACAGTGTaGGCAGGTCCAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVVQATV*AGPEGT
Trigger: CGTTCCTTCTGGACCTGCCCACACTGTGGCCTGCAC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTAGCCTCCTCAGACCCTaGATCATCGCCTGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSSLLRP*IIAWRL
Trigger: GAGGCGCCAGGCGATGATCCAGGGTCTGAGGAGGCT...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGCGTGGGTCGTAAGTaGGAGGTAGGTCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWSVGRK*EVGQLK
Trigger: CTTTAGCTGACCTACCTCTCACTTACGACCCACGCT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAAHAAV*RASQKP
Trigger: AGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSAHAAV*RASQKP
Trigger: AGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTCCACCTGGTGTTCCTTaGGAGTCTGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAPPGVP*ESAGCG
Trigger: ACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGG...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCACCTGGTGTTCCTTaGGAGTCTGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVPPGVP*ESAGCG
Trigger: ACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGG...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCACCTGGGAGCCATACTaGCTGAGGCTCTCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCTWEPY*LRLSKP
Trigger: TGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCACCTGGGAGCCATACTaGCTGAGGCTCTCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSTWEPY*LRLSKP
Trigger: TGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTCTCCGCCATGCCACTaGGGAAGACAAGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSSPPCH*GRQEGP
Trigger: GGGACCTTCTTGTCTTCCTCAGTGGCATGGCGGAGA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTCTCCGCCATGCCACTaGGGAAGACAAGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVSPPCH*GRQEGP
Trigger: GGGACCTTCTTGTCTTCCTCAGTGGCATGGCGGAGA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTCTCCGCCATGCCACTaGGGAAGACAAGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSPPCH*GRQEGP
Trigger: GGGACCTTCTTGTCTTCCTCAGTGGCATGGCGGAGA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGARAPA*AGPVGL
Trigger: GAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGCTCCCTTCTTGGCCTaGGGCCTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGAPFLA*GLLPLC
Trigger: ACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCGCTCCCTTCTTGGCCTaGGGCCTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCAPFLA*GLLPLC
Trigger: ACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGC...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGAGGGCCGGGATTCTaGCGCAGTTCACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQGGPGF*RSSPGM
Trigger: CATACCTGGTGAACTGCGTCAGAATCCCGGCCCTCC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGAGGGCCGGGATTCTaGCGCAGTTCACCAGGTATG +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSGGPGF*RSSPGM
Trigger: CATACCTGGTGAACTGCGTCAGAATCCCGGCCCTCC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTGTCAATGGAGCGGCTaGACAGCAGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVCQWSG*TAGGTG
Trigger: TCCAGTCCCTCCTGCTGTTCAGCCGCTCCATTGACA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGAACCTTGGCCACCATaGACTGCAGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSEPWPP*TAAAPC
Trigger: GCAGGGAGCTGCTGCAGTTCATGGTGGCCAAGGTTC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCGQVFS*AMRSKG
Trigger: ACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRGQVFS*AMRSKG
Trigger: ACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAGQVFS*AMRSKG
Trigger: ACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCAGGTGCTGGAATCTCTaGAGGCGTTCAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGRCWNL*RRSKKA
Trigger: GGCTTTCTTTGAACGCCTGCAGAGATTCCAGCACCT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGCTGGGCGATGGGAAGTaGCGCTCGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWLGDGK*RSLTLQ
Trigger: CTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAG...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCTTGGCCAGTGAGATaGAGGCGATTCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQAWPVR*RRFSGA
Trigger: AGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGGCCAGTGAGATaGAGGCGATTCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSAWPVR*RRFSGA
Trigger: AGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGAGCCTCCCAGGCACCTaGACCACCGGAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLSLPGT*TTGAWL
Trigger: CAGCCATGCTCCGGTGGTGCAGGTGCCTGGGAGGCT...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAATTCCTGCAGCCGCTaGAGTTTGGCCTGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCNSCSR*SLACGS
Trigger: CGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCATCTGAAGCACCAGTaGATCCAGGGCCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALHLKHQ*IQGHPA
Trigger: CGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATG...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCATCTCATACAGCCGGTaGTCCTCCACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRISYSR*SSTPRR
Trigger: CCGCCGGGGTGTGGAGGAGCACCGGCTGTATGAGAT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWASAPCA*VPHPPH
Trigger: ATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSCSTVP*LACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTGGCCTGAGGCCTCCTaGCCCTGTGTGTGTAATACC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEWPEAS*PCVCNT
Trigger: GGTATTACACACACAGGGGCAGGAGGCCTCAGGCCA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCACTGCAGCAGCTCCCTaGTCAGAGCAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSTAAAP*SEQPPP
Trigger: AGGAGGTGGCTGCTCTGAGCAGGGAGCTGCTGCAGT...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTAAAGAGGAAGTCCTaGCCGCACACCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAVKRKS*PHTWQW
Trigger: CCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTAC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGTAAAGAGGAAGTCCTaGCCGCACACCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEVKRKS*PHTWQW
Trigger: CCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTAC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGGGCCTCTTCCTCCCTaGGAGCTCGATGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRGPLPP*ELDGGL
Trigger: GAGACCACCATCGAGCTCCCAGGGAGGAAGAGGCCC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGTCCCATACTGGGCGATaGGAAGTGCCGCTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQSHTGR*EVPLAH
Trigger: GTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTCCCATACTGGGCGATaGGAAGTGCCGCTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSSHTGR*EVPLAH
Trigger: GTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGATGCGGTTCCCATACTaGGCGATGGGAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEMRFPY*AMGSAA
Trigger: AGCGGCACTTCCCATCGCCCAGTATGGGAACCGCAT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVATTTT*CSLRVC
Trigger: GCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSATTTT*CSLRVC
Trigger: GCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWASTIRT*YWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLSNTLS*SDTERA
Trigger: CGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCTTCCGGACTCCAGCTaGAGCCACATCGAACACCTT +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLLPDSS*SHIEHL
Trigger: AAGGTGTTCGATGTGGCTCCAGCTGGAGTCCGGAAG...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTGCAGTTTGGCCTGTaGGTCGTAGCTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWLQFGL*VVAHLL
Trigger: AAGGAGATGAGCTACGACCCACAGGCCAAACTGCAG...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRVKGSP*SLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCAC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCACTGGCGCCGCAGGTTaGCCATCTCATACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALTGAAG*PSHTAG
Trigger: ACCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAACAGCTCCTTGAACTaGCGCCGCAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSNSSLN*RRRLAI
Trigger: GATGGCCAACCTGCGGCGCCAGTTCAAGGAGCTGTT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAACAGCTCCTTGAACTaGCGCCGCAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQNSSLN*RRRLAI
Trigger: GATGGCCAACCTGCGGCGCCAGTTCAAGGAGCTGTT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCCTGGGGCCACTACCTaGGCCCCACTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRPGATT*APLSNP
Trigger: TGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCTGGGGCCACTACCTaGGCCCCACTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAPGATT*APLSNP
Trigger: TGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGGTCCTCTTCATCGCTaGAGCAGCCATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCGPLHR*SSHPPA
Trigger: TGCAGGAGGATGGCTGCTCCAGCGATGAAGAGGACC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGTCCTCTTCATCGCTaGAGCAGCCATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGPLHR*SSHPPA
Trigger: TGCAGGAGGATGGCTGCTCCAGCGATGAAGAGGACC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTCCTCTTCATCGCTaGAGCAGCCATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAGPLHR*SSHPPA
Trigger: TGCAGGAGGATGGCTGCTCCAGCGATGAAGAGGACC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCAGGTCCTGGGCTGAGCTaGCAGCTGCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QVLKQSLTLFAWTHCCPPGPGLS*QLPAAA
Trigger: AGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACC...TGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTCTCGGGTCAGGTCCTaGGCTGAGCTGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWSRVRS*AELAAA
Trigger: GGCAGCTGCCAGCTCAGCCCAGGACCTGACCCGAGA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGCACGGTGCCCTGCTTaGCCTGCGTGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQARCPA*PACGKS
Trigger: AGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCACGGTGCCCTGCTTaGCCTGCGTGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAARCPA*PACGKS
Trigger: AGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCAACAGCAGGAGGGACTaGAGGGCCGGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALNSRRD*RAGILT
Trigger: CGTCAGAATCCCGGCCCTCCAGTCCCTCCTGCTGTT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGAGAGCAGCCACCTCCTaGGGGCTGACTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWARAATS*GLTAGD
Trigger: GTCTCCAGCAGTCAGCCCCCAGGAGGTGGCTGCTCT...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCCCCTTGGTGGGGTGTaGAGACAGGGTAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLPLGGV*RQGRIS
Trigger: GGAAATTCTACCCTGTCTCCACACCCCACCAAGGGG...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGCAGGCCACAGTGTaGGCAGGTCCAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQVQATV*AGPEGT
Trigger: CGTTCCTTCTGGACCTGCCCACACTGTGGCCTGCAC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCG +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRNALGQ*DAGDSP
Trigger: CGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGACCTGGGAGCCATACTaGCTGAGGCTCTCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQTWEPY*LRLSKP
Trigger: TGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTACCTGGGAGCCATACTaGCTGAGGCTCTCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSTWEPY*LRLSKP
Trigger: TGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGT...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTGGGTCCAGCTTCTCTaGCTTGGATGCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEWVQLL*LGCCLV
Trigger: GACCAGACAGCATCCAAGTCAGAGAAGCTGGACCCA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGGGTCCAGCTTCTCTaGCTTGGATGCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRWVQLL*LGCCLV
Trigger: GACCAGACAGCATCCAAGTCAGAGAAGCTGGACCCA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGTCCAGCTTCTCTaGCTTGGATGCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCWVQLL*LGCCLV
Trigger: GACCAGACAGCATCCAAGTCAGAGAAGCTGGACCCA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTCTCCGCCATGCCACTaGGGAAGACAAGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALSPPCH*GRQEGP
Trigger: GGGACCTTCTTGTCTTCCTCAGTGGCATGGCGGAGA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGCCATCGATCGTGACTaGGGTCTCGGCAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSAIDRD*GLGNVG
Trigger: ACCAACATTGCCGAGACCTCAGTCACGATCGATGGC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSTKASS*CLQLIW
Trigger: CCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKTKASS*CLQLIW
Trigger: CCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGT...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQTKASS*CLQLIW
Trigger: CCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGTGTCAATGGAGCGGCTaGACAGCAGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQCQWSG*TAGGTG
Trigger: TCCAGTCCCTCCTGCTGTTCAGCCGCTCCATTGACA...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGAACCTTGGCCACCATaGACTGCAGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGREPWPP*TAAAPC
Trigger: GCAGGGAGCTGCTGCAGTTCATGGTGGCCAAGGTTC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWGPLQG*CLLWWC
Trigger: GCACCACCACAGAAGACATCAGCCCTGCAGAGGCCC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGAGGTGCTGGAATCTCTaGAGGCGTTCAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWRCWNL*RRSKKA
Trigger: GGCTTTCTTTGAACGCCTGCAGAGATTCCAGCACCT...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGGGAGGTCTTGAGGTaGTGGAATCTCTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRWEVLR*WNLCRR
Trigger: ACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGGAGGTCTTGAGGTaGTGGAATCTCTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQWEVLR*WNLCRR
Trigger: ACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCA...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVWLPTE*FQSGSG
Trigger: ACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAGISLG*VQHRGD
Trigger: ATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGTTGGTGGACAGGATaGACTTCCGGACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRCWWTG*TSGLQL
Trigger: CAGCTGGAGTCCGGAAGTGCATCCTGTCCACCAACA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGTTGGTGGACAGGATaGACTTCCGGACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSACWWTG*TSGLQL
Trigger: CAGCTGGAGTCCGGAAGTGCATCCTGTCCACCAACA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTTGGTGGACAGGATaGACTTCCGGACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCCWWTG*TSGLQL
Trigger: CAGCTGGAGTCCGGAAGTGCATCCTGTCCACCAACA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCAATTCCTGCAGCCGCTaGAGTTTGGCCTGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALNSCSR*SLACGS
Trigger: CGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAATTCCTGCAGCCGCTaGAGTTTGGCCTGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSNSCSR*SLACGS
Trigger: CGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATT...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGAATTCCTGCAGCCGCTaGAGTTTGGCCTGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQNSCSR*SLACGS
Trigger: CGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWHPGPP*GFPGLG
Trigger: ACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATG...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: QVLKQSLTLFAWTHCCPPHPGPP*GFPGLG
Trigger: ACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATG...TGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGATCTCATACAGCCGGTaGTCCTCCACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGISYSR*SSTPRR
Trigger: CCGCCGGGGTGTGGAGGAGCACCGGCTGTATGAGAT...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCAGCTGCTCCAGGTTGTaGCGAAGCTTGAATTTCACA +
Preference number: 4 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGSCSRL*RSLNFT
Trigger: TGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGTGCCCTGCTTGGCCTaGGTGTGGAAAATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEVPCLA*VWKIWS
Trigger: AGACCAGATTTTCCACACGCAGGCCAAGCAGGGCAC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGTGCCCTGCTTGGCCTaGGTGTGGAAAATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSVPCLA*VWKIWS
Trigger: AGACCAGATTTTCCACACGCAGGCCAAGCAGGGCAC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTGGCCTGAGGCCTCCTaGCCCTGTGTGTGTAATACC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALWPEAS*PCVCNT
Trigger: GGTATTACACACACAGGGGCAGGAGGCCTCAGGCCA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRPAADA*SSFGPC
Trigger: GCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGG...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAPAADA*SSFGPC
Trigger: GCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGG...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCACTGCAGCAGCTCCCTaGTCAGAGCAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRTAAAP*SEQPPP
Trigger: AGGAGGTGGCTGCTCTGAGCAGGGAGCTGCTGCAGT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTAAAGAGGAAGTCCTaGCCGCACACCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQVKRKS*PHTWQW
Trigger: CCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTAC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGAGCAGCCTCAGACTTaGCTGGATCATCGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAEQPQT*LDHRLA
Trigger: CGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGGGCCTCTTCCTCCCTaGGAGCTCGATGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGGPLPP*ELDGGL
Trigger: GAGACCACCATCGAGCTCCCAGGGAGGAAGAGGCCC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSATTPSV*AENGEV
Trigger: AACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGT...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTCCCATACTGGGCGATaGGAAGTGCCGCTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWASHTGR*EVPLAH
Trigger: GTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQATTTT*CSLRVC
Trigger: GCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSASNTLS*SDTERA
Trigger: CGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESNTLS*SDTERA
Trigger: CGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCTTCCGGACTCCAGCTaGAGCCACATCGAACACCTT +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKLPDSS*SHIEHL
Trigger: AAGGTGTTCGATGTGGCTCCAGCTGGAGTCCGGAAG...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCTTCCGGACTCCAGCTaGAGCCACATCGAACACCTT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRLPDSS*SHIEHL
Trigger: AAGGTGTTCGATGTGGCTCCAGCTGGAGTCCGGAAG...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQVKGSP*SLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCAC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAACAGCTCCTTGAACTaGCGCCGCAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSNSSLN*RRRLAI
Trigger: GATGGCCAACCTGCGGCGCCAGTTCAAGGAGCTGTT...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTGCTGTCGCTTCAGCTaGTGCAGGGCCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLCCRFS*CRALRS
Trigger: AGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCA...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRWQRHR*GAARCP
Trigger: AGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWSWLPS*PEASCP
Trigger: GGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGAGAGCAGCCACCTCCTaGGGGCTGACTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWRAATS*GLTAGD
Trigger: GTCTCCAGCAGTCAGCCCCCAGGAGGTGGCTGCTCT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCCCCTTGGTGGGGTGTaGAGACAGGGTAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCPLGGV*RQGRIS
Trigger: GGAAATTCTACCCTGTCTCCACACCCCACCAAGGGG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCCCCTTGGTGGGGTGTaGAGACAGGGTAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSPLGGV*RQGRIS
Trigger: GGAAATTCTACCCTGTCTCCACACCCCACCAAGGGG...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGTGCAGGCCACAGTGTaGGCAGGTCCAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRVQATV*AGPEGT
Trigger: CGTTCCTTCTGGACCTGCCCACACTGTGGCCTGCAC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTAGCGTGGGTCGTAAGTaGGAGGTAGGTCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSASVGRK*EVGQLK
Trigger: CTTTAGCTGACCTACCTCTCACTTACGACCCACGCT...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGCGTGGGTCGTAAGTaGGAGGTAGGTCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSVGRK*EVGQLK
Trigger: CTTTAGCTGACCTACCTCTCACTTACGACCCACGCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCCACCTGGTGTTCCTTaGGAGTCTGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRPPGVP*ESAGCG
Trigger: ACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGG...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCG +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGNALGQ*DAGDSP
Trigger: CGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTT...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCGSHTD*GSRSQR
Trigger: GCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCC...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTGGGTCCAGCTTCTCTaGCTTGGATGCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSWVQLL*LGCCLV
Trigger: GACCAGACAGCATCCAAGTCAGAGAAGCTGGACCCA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTCTCCGCCATGCCACTaGGGAAGACAAGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWASPPCH*GRQEGP
Trigger: GGGACCTTCTTGTCTTCCTCAGTGGCATGGCGGAGA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCGCCATCGATCGTGACTaGGGTCTCGGCAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALAIDRD*GLGNVG
Trigger: ACCAACATTGCCGAGACCTCAGTCACGATCGATGGC...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGCCATCGATCGTGACTaGGGTCTCGGCAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSAIDRD*GLGNVG
Trigger: ACCAACATTGCCGAGACCTCAGTCACGATCGATGGC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGTCAATGGAGCGGCTaGACAGCAGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRCQWSG*TAGGTG
Trigger: TCCAGTCCCTCCTGCTGTTCAGCCGCTCCATTGACA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGTGGGAGGTCTTGAGGTaGTGGAATCTCTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQWEVLR*WNLCRR
Trigger: ACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCA...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLCSLRV*RMRFPY
Trigger: GTATGGGAACCGCATCCTGCAGACTCTCAAGGAACA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWGISLG*VQHRGD
Trigger: ATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTGTTGGTGGACAGGATaGACTTCCGGACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSCWWTG*TSGLQL
Trigger: CAGCTGGAGTCCGGAAGTGCATCCTGTCCACCAACA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCATCTGAAGCACCAGTaGATCCAGGGCCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGHLKHQ*IQGHPA
Trigger: CGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATG...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQPAADA*SSFGPC
Trigger: GCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGG...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGACTGCAGCAGCTCCCTaGTCAGAGCAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWTAAAP*SEQPPP
Trigger: AGGAGGTGGCTGCTCTGAGCAGGGAGCTGCTGCAGT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGTAAAGAGGAAGTCCTaGCCGCACACCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAVKRKS*PHTWQW
Trigger: CCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTAC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGTAAAGAGGAAGTCCTaGCCGCACACCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRVKRKS*PHTWQW
Trigger: CCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTAC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTGTCTTCTGTGGTGGTaGAGGAGCAGCCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVCLLWW*RSSLRL
Trigger: AAGTCTGAGGCTGCTCCTGCACCACCACAGAAGACA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGAGGTCTTGAGGTGCTaGAATCTCTGCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSEVLRC*NLCRRS
Trigger: TGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALTTPSV*AENGEV
Trigger: AACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQTTPSV*AENGEV
Trigger: AACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCATGCGGTTCCCATACTaGGCGATGGGAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRMRFPY*AMGSAA
Trigger: AGCGGCACTTCCCATCGCCCAGTATGGGAACCGCAT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAATTTT*CSLRVC
Trigger: GCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAGGTCTCGGCAATGTTaGTGGACAGGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCRSRQC*WTGCTS
Trigger: GGAAGTGCATCCTGTCCACCAACATTGCCGAGACCT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGGTCTCGGCAATGTTaGTGGACAGGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQRSRQC*WTGCTS
Trigger: GGAAGTGCATCCTGTCCACCAACATTGCCGAGACCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGTCTCGGCAATGTTaGTGGACAGGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSRSRQC*WTGCTS
Trigger: GGAAGTGCATCCTGTCCACCAACATTGCCGAGACCT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGACTGGCGCCGCAGGTTaGCCATCTCATACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWTGAAG*PSHTAG
Trigger: ACCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGGTCCTCTTCATCGCTaGAGCAGCCATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAGPLHR*SSHPPA
Trigger: TGCAGGAGGATGGCTGCTCCAGCGATGAAGAGGACC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGTGCTTGGCCTGCGTGTaGAAAATCTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVCLACV*KIWSES
Trigger: GGACTCAGACCAGATTTTCCACACGCAGGCCAAGCA...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTGCTTGGCCTGCGTGTaGAAAATCTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSACLACV*KIWSES
Trigger: GGACTCAGACCAGATTTTCCACACGCAGGCCAAGCA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWWQRHR*GAARCP
Trigger: AGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGCAGGCCACAGTGTaGGCAGGTCCAGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWVQATV*AGPEGT
Trigger: CGTTCCTTCTGGACCTGCCCACACTGTGGCCTGCAC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTCTTCTGGGAGGTCTTaGGGTGCTGGAATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALSSGRS*GAGISA
Trigger: TGCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCCCACCTGGTGTTCCTTaGGAGTCTGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCPPGVP*ESAGCG
Trigger: ACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGG...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCAACCTGGGAGCCATACTaGCTGAGGCTCTCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QVLKQSLTLFAWTHCCPPTWEPY*LRLSKP
Trigger: TGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGT...TGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTCCACTCAGCAATCCATaGTCCTCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSPLSNP*SSNSSL
Trigger: CAAGGAGCTGTTGGAGGATCATGGATTGCTGAGTGG...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCCACTCAGCAATCCATaGTCCTCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALPLSNP*SSNSSL
Trigger: CAAGGAGCTGTTGGAGGATCATGGATTGCTGAGTGG...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGCCTGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: AGFLPTEGEGGTGPEAKPGCAEA*ISHPGC
Trigger: ACATCCAGGATGTGAAATTCAAGCTTCGGCACAACC...AGGCTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTGTCAATGGAGCGGCTaGACAGCAGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWCQWSG*TAGGTG
Trigger: TCCAGTCCCTCCTGCTGTTCAGCCGCTCCATTGACA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAGGTGCTGGAATCTCTaGAGGCGTTCAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: FICMDTLLSPTWALQEQCRCWNL*RRSKKA
Trigger: GGCTTTCTTTGAACGCCTGCAGAGATTCCAGCACCT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGTGCTGGAATCTCTaGAGGCGTTCAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRRCWNL*RRSKKA
Trigger: GGCTTTCTTTGAACGCCTGCAGAGATTCCAGCACCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTGGGAGGTCTTGAGGTaGTGGAATCTCTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAWEVLR*WNLCRR
Trigger: ACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSCSLRV*RMRFPY
Trigger: GTATGGGAACCGCATCCTGCAGACTCTCAAGGAACA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQECSLRV*RMRFPY
Trigger: GTATGGGAACCGCATCCTGCAGACTCTCAAGGAACA...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKCSLRV*RMRFPY
Trigger: GTATGGGAACCGCATCCTGCAGACTCTCAAGGAACA...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRWLPTE*FQSGSG
Trigger: ACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAWLPTE*FQSGSG
Trigger: ACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGGCCTGAGGCCTCCTaGCCCTGTGTGTGTAATACC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGWPEAS*PCVCNT
Trigger: GGTATTACACACACAGGGGCAGGAGGCCTCAGGCCA...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTGGCCTGAGGCCTCCTaGCCCTGTGTGTGTAATACC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWWPEAS*PCVCNT
Trigger: GGTATTACACACACAGGGGCAGGAGGCCTCAGGCCA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAGCTCATTTGGTCCCTaGCATCTTGGCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESSFGP*HLGSLL
Trigger: AAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGAGCTCATTTGGTCCCTaGCATCTTGGCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQSSFGP*HLGSLL
Trigger: AAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTCATTTGGTCCCTaGCATCTTGGCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRSSFGP*HLGSLL
Trigger: AAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRPAADA*SSFGPC
Trigger: GCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGG...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGGTCTTGAGGTGCTaGAATCTCTGCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSEVLRC*NLCRRS
Trigger: TGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRTTPSV*AENGEV
Trigger: AACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGATTTT*CSLRVC
Trigger: GCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGATACTTATTGTCGATaGCCTCCAGCACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQEDTYCR*PPAPSG
Trigger: TCCTGAGGGTGCTGGAGGCCATCGACAATAAGTATC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGATACTTATTGTCGATaGCCTCCAGCACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVDTYCR*PPAPSG
Trigger: TCCTGAGGGTGCTGGAGGCCATCGACAATAAGTATC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGATACTTATTGTCGATaGCCTCCAGCACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRDTYCR*PPAPSG
Trigger: TCCTGAGGGTGCTGGAGGCCATCGACAATAAGTATC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWASNTLS*SDTERA
Trigger: CGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCTTCCGGACTCCAGCTaGAGCCACATCGAACACCTT +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRLPDSS*SHIEHL
Trigger: AAGGTGTTCGATGTGGCTCCAGCTGGAGTCCGGAAG...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCAGGTCTCGGCAATGTTaGTGGACAGGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALRSRQC*WTGCTS
Trigger: GGAAGTGCATCCTGTCCACCAACATTGCCGAGACCT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGAGGTCTCGGCAATGTTaGTGGACAGGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: KPDFICMDTLLSPTWALQRSRQC*WTGCTS
Trigger: GGAAGTGCATCCTGTCCACCAACATTGCCGAGACCT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCCTGCAGTTTGGCCTGTaGGTCGTAGCTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSLQFGL*VVAHLL
Trigger: AAGGAGATGAGCTACGACCCACAGGCCAAACTGCAG...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWVKGSP*SLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCAC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTGCTTGGCCTGCGTGTaGAAAATCTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSCLACV*KIWSES
Trigger: GGACTCAGACCAGATTTTCCACACGCAGGCCAAGCA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTGCTTGGCCTGCGTGTaGAAAATCTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSCLACV*KIWSES
Trigger: GGACTCAGACCAGATTTTCCACACGCAGGCCAAGCA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCCATCGATCGTGACTaGGGTCTCGGCAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWAIDRD*GLGNVG
Trigger: ACCAACATTGCCGAGACCTCAGTCACGATCGATGGC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCACTCAGCAATCCATaGTCCTCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAPLSNP*SSNSSL
Trigger: CAAGGAGCTGTTGGAGGATCATGGATTGCTGAGTGG...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: DFICMDTLLSPTWALQEQGCAEA*ISHPGC
Trigger: ACATCCAGGATGTGAAATTCAAGCTTCGGCACAACC...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGTKASS*CLQLIW
Trigger: CCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGT...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSCSLRV*RMRFPY
Trigger: GTATGGGAACCGCATCCTGCAGACTCTCAAGGAACA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTGTTGGTGGACAGGATaGACTTCCGGACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLCWWTG*TSGLQL
Trigger: CAGCTGGAGTCCGGAAGTGCATCCTGTCCACCAACA...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR GCA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAGCTGCTCCAGGTTGTaGCGAAGCTTGAATTTCACA +
Preference number: 4 (lower is better)
Translates to: PDFICMDTLLSPTWALQESCSRL*RSLNFT
Trigger: TGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGCTGCTCCAGGTTGTaGCGAAGCTTGAATTTCACA +
Preference number: 4 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSSCSRL*RSLNFT
Trigger: TGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGCCCTGCTTGGCCTaGGTGTGGAAAATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWVPCLA*VWKIWS
Trigger: AGACCAGATTTTCCACACGCAGGCCAAGCAGGGCAC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCAGCTCATTTGGTCCCTaGCATCTTGGCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AKPDFICMDTLLSPTWALSSFGP*HLGSLL
Trigger: AAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGPAADA*SSFGPC
Trigger: GCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGG...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCGAGGTCTTGAGGTGCTaGAATCTCTGCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGREVLRC*NLCRRS
Trigger: TGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTC...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGAGGTCTTGAGGTGCTaGAATCTCTGCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAEVLRC*NLCRRS
Trigger: TGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCTTPSV*AENGEV
Trigger: AACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGT...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCSNTLS*SDTERA
Trigger: CGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGA...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCTTCCGGACTCCAGCTaGAGCCACATCGAACACCTT +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGLPDSS*SHIEHL
Trigger: AAGGTGTTCGATGTGGCTCCAGCTGGAGTCCGGAAG...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR TCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGAGCGTGGGTCGTAAGTaGGAGGTAGGTCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLSVGRK*EVGQLK
Trigger: CTTTAGCTGACCTACCTCTCACTTACGACCCACGCT...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSGCAEA*ISHPGC
Trigger: ACATCCAGGATGTGAAATTCAAGCTTCGGCACAACC...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGAGGTGCTGGAATCTCTaGAGGCGTTCAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWARCWNL*RRSKKA
Trigger: GGCTTTCTTTGAACGCCTGCAGAGATTCCAGCACCT...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTGTCTTCTGTGGTGGTaGAGGAGCAGCCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWCLLWW*RSSLRL
Trigger: AAGTCTGAGGCTGCTCCTGCACCACCACAGAAGACA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGGAGGTCTTGAGGTGCTaGAATCTCTGCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLEVLRC*NLCRRS
Trigger: TGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTC...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCTGCAGTTTGGCCTGTaGGTCGTAGCTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGLQFGL*VVAHLL
Trigger: AAGGAGATGAGCTACGACCCACAGGCCAAACTGCAG...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGCTTGGCCTGCGTGTaGAAAATCTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCCLACV*KIWSES
Trigger: GGACTCAGACCAGATTTTCCACACGCAGGCCAAGCA...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: EAKPDFICMDTLLSPTWAGCAEA*ISHPGC
Trigger: ACATCCAGGATGTGAAATTCAAGCTTCGGCACAACC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGACAACGAGTCTCTaGACAATTCCAGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSETTSL*TIPVPF
Trigger: AAATGGGACTGGAATTGTCCAGAGACTCGTTGTCTC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGATACTTATTGTCGATaGCCTCCAGCACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWDTYCR*PPAPSG
Trigger: TCCTGAGGGTGCTGGAGGCCATCGACAATAAGTATC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CCA 90 bp GGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGGATACTTATTGTCGATaGCCTCCAGCACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGTGPEAKPDFICMDTLLDTYCR*PPAPSG
Trigger: TCCTGAGGGTGCTGGAGGCCATCGACAATAAGTATC...CAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR TCA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGGCAEA*ISHPGC
Trigger: ACATCCAGGATGTGAAATTCAAGCTTCGGCACAACC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR GCA 90 bp CAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCAAGCTGCTCCAGGTTGTaGCGAAGCTTGAATTTCACA +
Preference number: 4 (lower is better)
Translates to: QVLKQSLTLFAWTHCCPPSCSRL*RSLNFT
Trigger: TGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCT...TGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS CCA 90 bp CGCTGGGCCTGGCGGGCCAGCTGCCGGTCCAGGGCACTTTCCCAGTaGACACGGAGCCGCAGGGATGTTGCCAGGAGCCGGACGGCACTC +
Preference number: 5 (lower is better)
Translates to: RWAWRASCRSRALSQ*TRSRRDVARSRTAL
Trigger: GAGTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTCCGTGTCCACTGGGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGCCCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp CGGGCACAGCCAGCTGTGGGTACAGCCCCCGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTCGGGTCAGGTCCTGGGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RAQPAVGTAPARAPA*AGPVGLGSGPGLSW
Trigger: CCAGCTCAGCCCAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGCGGGGGCTGTACCCACAGCTGGCTGTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp GCCACCTCCTGGGGGCTGACTGCTGGAGACCCCATGTCTTCCTCCTaGTCTAGCTTCCGTCGCTGGGCCTGGCGGGCCAGCTGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: ATSWGLTAGDPMSSS*SSFRRWAWRASCRS
Trigger: GGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAAGCTAGAGCAGGAGGAAGACATGGGGTCTCCAGCAGTCAGCCCCCAGGAGGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GGGCCCGTGCGGCCCGCTCGGCCCTTGCGCTGCTCAGCACTGGCCTaGCTGATCCAGAATTCCTGCAGCCGCTGCAGTTTGGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GPVRPARPLRCSALA*LIQNSCSRCSLACG
Trigger: CCCACAGGCCAAACTGCAGCGGCTGCAGGAATTCTGGATCAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGCGGGCCGCACGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TGTGGGTACAGCCCCCGCCCGAGCACCAGCTTGAGCAGGGCCAGTTaGTCTCGGGTCAGGTCCTGGGCTGAGCTGGCAGCTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CGYSPRPSTSLSRAS*SRVRSWAELAAACS
Trigger: GCTGCAGGCAGCTGCCAGCTCAGCCCAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGCGGGGGCTGTACCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp CGGAACTCGGACACTCTCTCGGGCGGCAGCCCCCTGCCGGGCCCATaGCGACCCCGAGTGTCTGGGCTGAGAATGGAGAGGTTGATGCGG +
Preference number: 5 (lower is better)
Translates to: RNSDTLSGGSPLPGP*RPRVSGLRMERLMR
Trigger: CCGCATCAACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGTCATGGGCCCGGCAGGGGGCTGCCGCCCGAGAGAGTGTCCGAGTTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp CCGTGCGGCCCGCTCGGCCCTTGCGCTGCTCAGCACTGGCCTGGCTaGTCCAGAATTCCTGCAGCCGCTGCAGTTTGGCCTGTGGGTCGT +
Preference number: 5 (lower is better)
Translates to: PCGPLGPCAAQHWPG*SRIPAAAAVWPVGR
Trigger: ACGACCCACAGGCCAAACTGCAGCGGCTGCAGGAATTCTGGATCAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGCGGGCCGCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp CGGCAGCACCACCCAGCGCTGGGTGAGGCTGGCATAAGCCTGGGCTaGGTCCAGCACCGTGGTGATCTCCGCCATGCCACTGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RQHHPALGEAGISLG*VQHRGDLRHATEED
Trigger: GTCTTCCTCAGTGGCATGGCGGAGATCACCACGGTGCTGGACGCAGCCCAGGCTTATGCCAGCCTCACCCAGCGCTGGGTGGTGCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp CATCGCTGGAGCAGCCATCCTCCTGCAGCCTCAGCACCTTGCGCCTaGGTCCCCCACCCTCCTCATGCTGTCGCTTCAGCTGGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: HRWSSHPPAASAPCA*VPHPPHAVASAGAG
Trigger: CCCTGCACCAGCTGAAGCGACAGCATGAGGAGGGTGGGGGACGCAGGCGCAAGGTGCTGAGGCTGCAGGAGGATGGCTGCTCCAGCGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp CTCGGGCGGCAGCCCCCTGCCGGGCCCATGACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTTGATGCGGTAGCGTGGGTCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LGRQPPAGPMTTPSV*AENGEVDAVAWVVS
Trigger: ACTTACGACCCACGCTACCGCATCAACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGTCATGGGCCCGGCAGGGGGCTGCCGCCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GCTCGTGGACCTCGTCCACGATCAGGACCTGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGCGTAGGAGCAGCCCCACCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ARGPRPRSGPGTGAG*AHAGSGVGAAPPSG
Trigger: TCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TGCAGGTGTCGCTCGTGGACCTCGTCCACGATCAGGACCTGGTACTaGGGCAGGCTGGGCTCACGCTGGATCTGGCGTAGGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: CRCRSWTSSTIRTWY*GRLGSRWIWRRSSP
Trigger: GGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGCGACACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp ACTGCTGGAGACCCCATGTCTTCCTCCTGCTCTAGCTTCCGTCGCTaGGCCTGGCGGGCCAGCTGCCGGTCCAGGGCACTTTCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TAGDPMSSSCSSFRR*AWRASCRSRALSQW
Trigger: CCACTGGGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAAGCTAGAGCAGGAGGAAGACATGGGGTCTCCAGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp AGGGATGTTGCCAGGAGCCGGACGGCACTCTCGCTATCTGCGAGCTaGAGCTCTAGCCAACCGTCAGCCACCAGGCGGGAGCAGTCACCG +
Preference number: 5 (lower is better)
Translates to: RDVARSRTALSLSAS*SSSQPSATRREQSP
Trigger: CGGTGACTGCTCCCGCCTGGTGGCTGACGGTTGGCTAGAGCTGCAGCTCGCAGATAGCGAGAGTGCCGTCCGGCTCCTGGCAACATCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp GAAGTCCTGCCCGCACACCTGGCAGTGGTAGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGCAGGAGCAGCCTCCTCAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: EVLPAHLAVVGPLQG*CLLWWCRSSLLRPW
Trigger: CCAGGGTCTGAGGAGGCTGCTCCTGCACCACCACAGAAGACATCAGCCCTGCAGAGGCCCTACCACTGCCAGGTGTGCGGGCAGGACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS CCA 90 bp CGCTGCAGGACACCCAGCAGGAAGTCATTGTGCAGGTGTCGCTCGTaGACCTCGTCCACGATCAGGACCTGGTACTGGGGCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RCRTPSRKSLCRCRS*TSSTIRTWYWGRLG
Trigger: GCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGCGACACCTGCACAATGACTTCCTGCTGGGTGTCCTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp GGCAGTGGCACAGTCCAGGTTGCTCTGGGCACTGCGGGTGAATGGTaGCTGGACGCTGAGGGCAGCAGCAATGGTGAGCACAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GSGTVQVALGTAGEW*LDAEGSSNGEHRLC
Trigger: GCAGAGCCTGTGCTCACCATTGCTGCTGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp TGGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCACTGTTaGACGCATCGGGCACAGCCAGCTGTGGGTACAGCCCCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: WPACGKSGLSPCGHC*THRAQPAVGTAPAR
Trigger: TCGGGCGGGGGCTGTACCCACAGCTGGCTGTGCCCGATGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp GAAGTCCTGCCCGCACACCTGGCAGTGGTAGGGCCTCTGCAGGGCTaGTGTCTTCTGTGGTGGTGCAGGAGCAGCCTCAGACTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: EVLPAHLAVVGPLQG*CLLWWCRSSLRLAW
Trigger: CCAGGCAAGTCTGAGGCTGCTCCTGCACCACCACAGAAGACATCAGCCCTGCAGAGGCCCTACCACTGCCAGGTGTGCGGGCAGGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS GCA 90 bp GACATGAGGATGACCTTGAGGTCAGGCCGCTGGGGCAGCAGGCGCTaGAGGACACCCAGCAGGAAGTCATTGTGCAGGTGTCGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: DMRMTLRSGRWGSRR*RTPSRKSLCRCRSW
Trigger: CCACGAGCGACACCTGCACAATGACTTCCTGCTGGGTGTCCTGCAGCGCCTGCTGCCCCAGCGGCCTGACCTCAAGGTCATCCTCATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp ACGATCAGGACCTGGTACTGGGGCAGGCTGGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TIRTWYWGRLGSRWI*RRSSPTVRNTILVA
Trigger: AGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TCGTCCACGATCAGGACCTGGTACTGGGGCAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSTIRTWYWGRLGSR*IWRRSSPTVRNTIL
Trigger: CAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TCATTGTGCAGGTGTCGCTCGTGGACCTCGTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGCTCACGCTGGATCTGGCGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLCRCRSWTSSTIRT*YWGRLGSRWIWRRS
Trigger: GCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGCGACACCTGCACAATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GTGGCACAGTCCAGGTTGCTCTGGGCACTGCGGGTGAATGGTGACTaGACGCTGAGGGCAGCAGCAATGGTGAGCACAGGCTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VAQSRLLWALRVNGD*TLRAAAMVSTGSAR
Trigger: CCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TCACTTTCCAGCGGTCTCCGGGCAGTGGCACAGTCCAGGTTGCTCTaGGCACTGCGGGTGAATGGTGACTGGACGCTGAGGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLSSGLRAVAQSRLL*ALRVNGDWTLRAAA
Trigger: TGCTGCTGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCACTGCCCGGAGACCGCTGGAAAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GGCCTGAGGCCTCCTGCCCCTGTGTGTGTAATACCTCAGGGCTGTTaGCAAAGACACAGGTGGGGTGCAGCACGGTGCCCTGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GLRPPAPVCVIPQGC*QRHRWGAARCPAWP
Trigger: AGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATTACACACACAGGGGCAGGAGGCCTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp CTGTGGTGGTGCAGGAGCAGCCTCCTCAGACCCTGGATCATCGCCTaGCGCCTCAGGGCAGGTGTTCTCATGAGCAATGCGCTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: LWWCRSSLLRPWIIA*RLRAGVLMSNALQG
Trigger: CCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGGTCTGAGGAGGCTGCTCCTGCACCACCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCTCGAAGCCAACGCGCTaGGCCAGTGAGATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGSKPTR*ASEMQA
Trigger: CGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGA...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGACATGAGGATGACCTaGAGGTCAGGCCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGDMRMT*RSGRWG
Trigger: GCCCCAGCGGCCTGACCTCAAGGTCATCCTCATGTC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWVAQSR*LWALRV
Trigger: CACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCAC...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGCAGCCTCAGCACCTaGCGCCTGCGTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSCSLST*RLRPPP
Trigger: GGGTGGGGGACGCAGGCGCAAGGTGCTGAGGCTGCA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGGAGCCGCAGGGATGTaGCCAGGAGCCGGACGGCAC +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCGAAGM*PGAGRH
Trigger: GTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTCC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGGAGCCGCAGGGATGTaGCCAGGAGCCGGACGGCAC +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRGAAGM*PGAGRH
Trigger: GTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTCC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp GTGCAGCACGGTGCCCTGCTTGGCCTGCGTGTGGAAAATCTGGTCTaGGTCCTTGCGGCCACTGTTGAACGCATCGGGCACAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VQHGALLGLRVENLV*VLAATVERIGHSQL
Trigger: CAGCTGGCTGTGCCCGATGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp CTGTGGTGGTGCAGGAGCAGCCTCAGACTTGCCTGGATCATCGCCTaGCGCCTCAGGGCAGGTGTTCTCATGAGCAATGCGCTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: LWWCRSSLRLAWIIA*RLRAGVLMSNALQG
Trigger: CCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCCTGCACCACCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS TCA 90 bp GGAGCCATACTGACTGAGGCTCTCGAAGCCAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCGGGGCTGAGTGCATGCCACGTGACT +
Preference number: 5 (lower is better)
Translates to: GAILTEALEANALGQ*DAGDSPGLSACHVT
Trigger: AGTCACGTGGCATGCACTCAGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp GCGCCTCAGGGCAGGTGTTCTCATGAGCAATGCGCTCCAAGGGTGTaGAGGGCATGTGCAGGCCACAGTGTGGGCAGGTCCAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: APQGRCSHEQCAPRV*RACAGHSVGRSRRN
Trigger: GTTCCTTCTGGACCTGCCCACACTGTGGCCTGCACATGCCCTTCACACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp TCAGACCCTGGATCATCGCCTGGCGCCTCAGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGTGTGAAGGGCATGTGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: SDPGSSPGASGQVFS*AMRSKGVKGMCRPQ
Trigger: CTGTGGCCTGCACATGCCCTTCACACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS TCA 90 bp GACTTGCCTGGATCATCGCCTGGCGCCTCAGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGTGTGAAGGGCATGTGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: DLPGSSPGASGQVFS*AMRSKGVKGMCRPQ
Trigger: CTGTGGCCTGCACATGCCCTTCACACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS GCA 90 bp GCCAGTTGGTCTCGGGTCAGGTCCTGGGCTGAGCTGGCAGCTGCCTaGAGCTGCTCCAGGTTGTGCCGAAGCTTGAATTTCACATCCTGG +
Preference number: 5 (lower is better)
Translates to: ASWSRVRSWAELAAA*SCSRLCRSLNFTSW
Trigger: CCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACCTGACCCGAGACCAACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp TCAGGGCTGTTGGCAAAGACACAGGTGGGGTGCAGCACGGTGCCCTaGTTGGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SGLLAKTQVGCSTVP*LACVWKIWSESLRP
Trigger: TGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GGCTGTTGGCAAAGACACAGGTGGGGTGCAGCACGGTGCCCTGCTTaGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCACTGT +
Preference number: 5 (lower is better)
Translates to: GCWQRHRWGAARCPA*PACGKSGLSPCGHC
Trigger: ACAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTCGAAGCCAACGCGCTaGGCCAGTGAGATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLSKPTR*ASEMQA
Trigger: CGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCVAQSR*LWALRV
Trigger: CACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCAC...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: PDFICMDTLLSPTWALQEVAQSR*LWALRV
Trigger: CACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCAC...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGTGCAGCCTCAGCACCTaGCGCCTGCGTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: EAKPDFICMDTLLSPTWACSLST*RLRPPP
Trigger: GGGTGGGGGACGCAGGCGCAAGGTGCTGAGGCTGCA...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGCAGCCTCAGCACCTaGCGCCTGCGTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRCSLST*RLRPPP
Trigger: GGGTGGGGGACGCAGGCGCAAGGTGCTGAGGCTGCA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGGAGCAGCCTCAGACTaGCCTGGATCATCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLGAASD*PGSSPG
Trigger: GCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCC...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS GCA 90 bp GCAGCCCCACCGTCAGGAACACGATCTTGGTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGTAGCCAACCTGGGAGCCATACTGAC +
Preference number: 5 (lower is better)
Translates to: AAPPSGTRSWWLPTE*FQSGSGSQPGSHTD
Trigger: GTCAGTATGGCTCCCAGGTTGGCTACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp ACCACCTGGTGTTCCTTGAGAGTCTGCAGGATGCGGTTCCCATACTaGGCGATGGGAAGTGCCGCTCGCTCACGCTGCAGTTTGACGAGC +
Preference number: 5 (lower is better)
Translates to: TTWCSLRVCRMRFPY*AMGSAARSRCSLTS
Trigger: GCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGAACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GGATCTGGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTTGGTaGCTGCCGACCGAGTGCTTTCAAAGCGGATCTGGTAGCCAACCT +
Preference number: 5 (lower is better)
Translates to: GSGVGAAPPSGTRSW*LPTECFQSGSGSQP
Trigger: AGGTTGGCTACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GCTGGATCTGGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTTaGTGGCTGCCGACCGAGTGCTTTCAAAGCGGATCTGGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: AGSGVGAAPPSGTRS*WLPTECFQSGSGSQ
Trigger: TTGGCTACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp CTGAAGCACCAGTGCATCCAGGGCCACCCTGCGGATTTCCGGGACTaGGTACGGCGCAAAGGCATCATAGTCAGACTCGGCATAGAGACG +
Preference number: 5 (lower is better)
Translates to: LKHQCIQGHPADFRD*VRRKGIIVRLGIET
Trigger: CGTCTCTATGCCGAGTCTGACTATGATGCCTTTGCGCCGTACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATGCACTGGTGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTCGAAGCCAACGCGCTaGGCCAGTGAGATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCSKPTR*ASEMQA
Trigger: CGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGACATGAGGATGACCTaGAGGTCAGGCCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSADMRMT*RSGRWG
Trigger: GCCCCAGCGGCCTGACCTCAAGGTCATCCTCATGTC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCGCCACATCGAACACCTaGTCCTGGTCAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGATSNT*SWSDTE
Trigger: CTCTGTGTCTGACCAGGACAAGGTGTTCGATGTGGC...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAACTGGCGCCGCAGGTaGGCCATCTCATACAGCCGG +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVNWRRR*AISYSR
Trigger: CCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGTT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGCAGCCTCAGCACCTaGCGCCTGCGTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGCSLST*RLRPPP
Trigger: GGGTGGGGGACGCAGGCGCAAGGTGCTGAGGCTGCA...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTTGAGCAGGGCCAGTaGGTCTCGGGTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PDFICMDTLLSPTWALQELEQGQ*VSGQVL
Trigger: CAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAG...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCTTGAGCAGGGCCAGTaGGTCTCGGGTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCLEQGQ*VSGQVL
Trigger: CAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGCATCTGGTCTGAGTCCTaGCGGCCACTGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: FAWTHCCPPLGRSRSSAGIWSES*RPLLNA
Trigger: TGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGAT...GCCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCGGGAGCAGTCACCGTaGGTGTCAATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCREQSP*VSMERL
Trigger: CAGCCGCTCCATTGACACCAACGGTGACTGCTCCCG...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCCGGGAGCAGTCACCGTaGGTGTCAATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSREQSP*VSMERL
Trigger: CAGCCGCTCCATTGACACCAACGGTGACTGCTCCCG...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGCGGGAGCAGTCACCGTaGGTGTCAATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRREQSP*VSMERL
Trigger: CAGCCGCTCCATTGACACCAACGGTGACTGCTCCCG...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTCGGGAGCAGTCACCGTaGGTGTCAATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAREQSP*VSMERL
Trigger: CAGCCGCTCCATTGACACCAACGGTGACTGCTCCCG...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGGAGCCGCAGGGATGTaGCCAGGAGCCGGACGGCAC +
Preference number: 5 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGGAAGM*PGAGRH
Trigger: GTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTCC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGAGCCGCAGGGATGTaGCCAGGAGCCGGACGGCAC +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWGAAGM*PGAGRH
Trigger: GTGCCGTCCGGCTCCTGGCAACATCCCTGCGGCTCC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCGGAGCAGCCTCAGACTaGCCTGGATCATCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSGAASD*PGSSPG
Trigger: GCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCC...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS GCA 90 bp ATGCGGTTCCCATACTGGGCGATGGGAAGTGCCGCTCGCTCACGCTaGAGTTTGACGAGCCTCCCAAAAGCCTGCTTCTGCTGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: MRFPYWAMGSAARSR*SLTSLPKACFCWKS
Trigger: AGACTTCCAGCAGAAGCAGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGAACCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp TGGTCTCGGGTCAGGTCCTGGGCTGAGCTGGCAGCTGCCTGCAGCTaGTCCAGGTTGTGCCGAAGCTTGAATTTCACATCCTGGATGTCA +
Preference number: 5 (lower is better)
Translates to: WSRVRSWAELAAACS*SRLCRSLNFTSWMS
Trigger: TGACATCCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGCCAGCTCAGCCCAGGACCTGACCCGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp ATACCTCAGGGCTGTTGGCAAAGACACAGGTGGGGTGCAGCACGGTaGCCTGCTTGGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: IPQGCWQRHRWGAAR*PAWPACGKSGLSPC
Trigger: GCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GCCTGCAGCTGCTCCAGGTTGTGCCGAAGCTTGAATTTCACATCCTaGATGTCAACGCTGTCAGCCCTCTGGGAGGTAGAGCCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ACSCSRLCRSLNFTS*MSTLSALWEVEPSR
Trigger: CCGAGAGGGCTCTACCTCCCAGAGGGCTGACAGCGTTGACATCCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp GCCCCTGTGTGTGTAATACCTCAGGGCTGTTGGCAAAGACACAGGTaGGGTGCAGCACGGTGCCCTGCTTGGCCTGCGTGTGGAAAATCT +
Preference number: 5 (lower is better)
Translates to: APVCVIPQGCWQRHR*GAARCPAWPACGKS
Trigger: AGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATTACACACACAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTCGAAGCCAACGCGCTaGGCCAGTGAGATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSSKPTR*ASEMQA
Trigger: CGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGACATGAGGATGACCTaGAGGTCAGGCCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQDMRMT*RSGRWG
Trigger: GCCCCAGCGGCCTGACCTCAAGGTCATCCTCATGTC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGAACTGGCGCCGCAGGTaGGCCATCTCATACAGCCGG +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQNWRRR*AISYSR
Trigger: CCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGTT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGCACGGTGCCCTGCTaGGCCTGCGTGTGGAAAATC +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVSTVPC*ACVWKI
Trigger: GATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCACGGTGCCCTGCTaGGCCTGCGTGTGGAAAATC +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRSTVPC*ACVWKI
Trigger: GATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTAGCACGGTGCCCTGCTaGGCCTGCGTGTGGAAAATC +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSASTVPC*ACVWKI
Trigger: GATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCT...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGAGCAGCCTCAGACTaGCCTGGATCATCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQGAASD*PGSSPG
Trigger: GCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS TCA 90 bp TCCCATACTGGGCGATGGGAAGTGCCGCTCGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCTGCTTCTGCTGGAAGTCTAGGTAGT +
Preference number: 5 (lower is better)
Translates to: SHTGRWEVPLAHAAV*RASQKPASAGSLGS
Trigger: ACTACCTAGACTTCCAGCAGAAGCAGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAGTATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp GCTTGTTGGTCTCCAGTAGGGAGACGAAGGCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGCCATCTTGGCTCCCTTCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: ACWSPVGRRRPAADA*SSFGPCHLGSLLGL
Trigger: CAGGCCAAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGTCTCCCTACTGGAGACCAACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp TGCACCCAGGCATTGAAGACATTGAAGAGTGTGAAGGGGTCACCCTaGTCACTTTCCAGCGGTCTCCGGGCAGTGGCACAGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: CTQALKTLKSVKGSP*SLSSGLRAVAQSRL
Trigger: CAACCTGGACTGTGCCACTGCCCGGAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWFFWEV*RCWNLC
Trigger: GCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGGACATGAGGATGACCTaGAGGTCAGGCCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EAKPDFICMDTLLSPTWADMRMT*RSGRWG
Trigger: GCCCCAGCGGCCTGACCTCAAGGTCATCCTCATGTC...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWVAQSR*LWALRV
Trigger: CACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCAC...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGAACTGGCGCCGCAGGTaGGCCATCTCATACAGCCGG +
Preference number: 5 (lower is better)
Translates to: EAKPDFICMDTLLSPTWANWRRR*AISYSR
Trigger: CCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGTT...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCAACTGGCGCCGCAGGTaGGCCATCTCATACAGCCGG +
Preference number: 5 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRNWRRR*AISYSR
Trigger: CCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGTT...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGGTGCAGCTGCTCCAGGTaGTGCCGAAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: ICMDTLLSPTWALQEQCWCSCSR*CRSLNF
Trigger: GAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCA...CCAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCCTTGAGCAGGGCCAGTaGGTCTCGGGTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRLEQGQ*VSGQVL
Trigger: CAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAG...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTTGAGCAGGGCCAGTaGGTCTCGGGTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: EAKPDFICMDTLLSPTWALEQGQ*VSGQVL
Trigger: CAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAG...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGACCAGGTATGGCTTGTaGGTCTCCAGTAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLTRYGL*VSSRET
Trigger: CGTCTCCCTACTGGAGACCAACAAGCCATACCTGGT...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp CACTCATACTCTTCATCTGAAGCACCAGTGCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGTACGGCGCAAAGGCATCATAGTCAG +
Preference number: 5 (lower is better)
Translates to: HSYSSSEAPVHPGPP*GFPGLGTAQRHHSQ
Trigger: CTGACTATGATGCCTTTGCGCCGTACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATGAAGAGTATGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 90 bp TGTGTGTGTAATACCTCAGGGCTGTTGGCAAAGACACAGGTGGGGTaGAGCACGGTGCCCTGCTTGGCCTGCGTGTGGAAAATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: CVCNTSGLLAKTQVG*STVPCLACVWKIWS
Trigger: AGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATTACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 90 bp CGAAGCTTGAATTTCACATCCTGGATGTCAACGCTGTCAGCCCTCTaGGAGGTAGAGCCCTCTCGGTCCTCTTCATCGCTGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RSLNFTSWMSTLSAL*EVEPSRSSSSLEQP
Trigger: TGGCTGCTCCAGCGATGAAGAGGACCGAGAGGGCTCTACCTCCCAGAGGGCTGACAGCGTTGACATCCAGGATGTGAAATTCAAGCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCACCACCTGGTGTTCCTaGAGAGTCTGCAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: AKPDFICMDTLLSPTWALTTWCS*RVCRMR
Trigger: CCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGT...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGACCACCTGGTGTTCCTaGAGAGTCTGCAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQTTWCS*RVCRMR
Trigger: CCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGCCACATCGAACACCTaGTCCTGGTCAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAATSNT*SWSDTE
Trigger: CTCTGTGTCTGACCAGGACAAGGTGTTCGATGTGGC...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGAGGTCTCGGCAATGTaGGTGGACAGGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVEVSAM*VDRMHF
Trigger: GAAGTGCATCCTGTCCACCAACATTGCCGAGACCTC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGGGAGGCACAGGTCCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCAACTGGCGCCGCAGGTaGGCCATCTCATACAGCCGG +
Preference number: 5 (lower is better)
Translates to: REAQVLKQSLTLFAWTHCNWRRR*AISYSR
Trigger: CCGGCTGTATGAGATGGCCAACCTGCGGCGCCAGTT...GCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGGACCTGTGCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CAA 90 bp GACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGATCTGGTCTGAGTCCTaGCGGCCACTGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: DFICMDTLLSPTWALQEQIWSES*RPLLNA
Trigger: TGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGAT...CTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCATCTGGTCTGAGTCCTaGCGGCCACTGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSIWSES*RPLLNA
Trigger: TGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGAT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGATCTGGTCTGAGTCCTaGCGGCCACTGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVIWSES*RPLLNA
Trigger: TGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGAT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAATACCTCAGGGCTGTaGGCAAAGACACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PDFICMDTLLSPTWALQENTSGL*AKTQVG
Trigger: CCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATT...CTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAATACCTCAGGGCTGTaGGCAAAGACACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVNTSGL*AKTQVG
Trigger: CCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAATACCTCAGGGCTGTaGGCAAAGACACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRNTSGL*AKTQVG
Trigger: CCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCACCAGGTATGGCTTGTaGGTCTCCAGTAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSTRYGL*VSSRET
Trigger: CGTCTCCCTACTGGAGACCAACAAGCCATACCTGGT...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTGTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: YLHGHTAVPHLGAPGAVLFTRYG*LVSSRE
Trigger: CTCCCTACTGGAGACCAACAAGCCATACCTGGTGAA...CAGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGCGGGAGCAGTCACCGTaGGTGTCAATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWREQSP*VSMERL
Trigger: CAGCCGCTCCATTGACACCAACGGTGACTGCTCCCG...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp AGGTATGGCTTGTTGGTCTCCAGTAGGGAGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGGTCCCTGCCATCTTGGCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RYGLLVSSRETKASS*CLQLIWSLPSWLPS
Trigger: AGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGTCTCCCTACTGGAGACCAACAAGCCATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSFFWEV*RCWNLC
Trigger: GCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAFFWEV*RCWNLC
Trigger: GCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAA...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGGAGAAGAGAGAGATGTaGATGGTGGCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVEKREM*MVADMR
Trigger: CCTCATGTCGGCCACCATCAACATCTCTCTCTTCTC...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGGAGAAGAGAGAGATGTaGATGGTGGCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSREKREM*MVADMR
Trigger: CCTCATGTCGGCCACCATCAACATCTCTCTCTTCTC...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCCACATCGAACACCTaGTCCTGGTCAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSATSNT*SWSDTE
Trigger: CTCTGTGTCTGACCAGGACAAGGTGTTCGATGTGGC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCGAGGTCTCGGCAATGTaGGTGGACAGGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: AKPDFICMDTLLSPTWALEVSAM*VDRMHF
Trigger: GAAGTGCATCCTGTCCACCAACATTGCCGAGACCTC...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGGTCTCGGCAATGTaGGTGGACAGGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSEVSAM*VDRMHF
Trigger: GAAGTGCATCCTGTCCACCAACATTGCCGAGACCTC...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTGCAGCTGCTCCAGGTaGTGCCGAAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSCSCSR*CRSLNF
Trigger: GAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTATGCTTGCAGCTCATTaGGTCCCTGCCATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFAWTHCCPPLGRSRSSAMLAAH*VPAILA
Trigger: AGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCAT...AGCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGGCTGGGTTTCTTCCCACTGAGGGTGAGGGAGGCACAGGTCCTGAAGCAAAGATGCTTGCAGCTCATTaGGTCCCTGCCATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KAGFLPTEGEGGTGPEAKMLAAH*VPAILA
Trigger: AGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCAT...CTTTGCTTCAGGACCTGTGCCTCCCTCACCCTCAGTGGGAAGAAACCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121123.8
CDS-3UTR CAA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCACCAGGTATGGCTTGTaGGTCTCCAGTAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSTRYGL*VSSRET
Trigger: CGTCTCCCTACTGGAGACCAACAAGCCATACCTGGT...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRFTRYG*LVSSRE
Trigger: CTCCCTACTGGAGACCAACAAGCCATACCTGGTGAA...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCFTRYG*LVSSRE
Trigger: CTCCCTACTGGAGACCAACAAGCCATACCTGGTGAA...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: LTLFAWTHCCPPLGRSRSFTRYG*LVSSRE
Trigger: CTCCCTACTGGAGACCAACAAGCCATACCTGGTGAA...GCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQFFWEV*RCWNLC
Trigger: GCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAA...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGACCACCTGGTGTTCCTaGAGAGTCTGCAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWTTWCS*RVCRMR
Trigger: CCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGAAGAGAGAGATGTaGATGGTGGCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQEKREM*MVADMR
Trigger: CCTCATGTCGGCCACCATCAACATCTCTCTCTTCTC...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCTGCAGCTGCTCCAGGTaGTGCCGAAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: AKPDFICMDTLLSPTWALCSCSR*CRSLNF
Trigger: GAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCA...GAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCTGCAGCTGCTCCAGGTaGTGCCGAAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSCSCSR*CRSLNF
Trigger: GAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCA...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCATGCTTGCAGCTCATTaGGTCCCTGCCATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: QSLTLFAWTHCCPPLGRSMLAAH*VPAILA
Trigger: AGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCAT...GGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp GAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGACCAGGTATGGCTTGTaGGTCTCCAGTAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: EAKPDFICMDTLLSPTWATRYGL*VSSRET
Trigger: CGTCTCCCTACTGGAGACCAACAAGCCATACCTGGT...CGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp ACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: TLFAWTHCCPPLGRSRSSFTRYG*LVSSRE
Trigger: CTCCCTACTGGAGACCAACAAGCCATACCTGGTGAA...ACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGCCACATCGAACACCTaGTCCTGGTCAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGATSNT*SWSDTE
Trigger: CTCTGTGTCTGACCAGGACAAGGTGTTCGATGTGGC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp TTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGCAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: FICMDTLLSPTWALQEQCRLCRS*NFTSWM
Trigger: CATCCAGGATGTGAAATTCAAGCTTCGGCACAACCT...GCACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGCAGTGAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LYLHGHTAVPHLGAPGAVRLCRS*NFTSWM
Trigger: CATCCAGGATGTGAAATTCAAGCTTCGGCACAACCT...CACTGCTCCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGGAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: SLTLFAWTHCCPPLGRSRRLCRS*NFTSWM
Trigger: CATCCAGGATGTGAAATTCAAGCTTCGGCACAACCT...CCTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTGCAGCTGCTCCAGGTaGTGCCGAAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: KQSLTLFAWTHCCPPLGRCSCSR*CRSLNF
Trigger: GAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCA...GCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWFFWEV*RCWNLC
Trigger: GCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAA...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGGAGAAGAGAGAGATGTaGATGGTGGCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: LKQSLTLFAWTHCCPPLGEKREM*MVADMR
Trigger: CCTCATGTCGGCCACCATCAACATCTCTCTCTTCTC...CCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp AAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGGCGCTCCAGAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: KPDFICMDTLLSPTWALQRLCRS*NFTSWM
Trigger: CATCCAGGATGTGAAATTCAAGCTTCGGCACAACCT...CTGGAGCGCCCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGATGCTTGCAGCTCATTaGGTCCCTGCCATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWMLAAH*VPAILA
Trigger: AGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCAT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS-3UTR CAA 90 bp CCTGAAGCAAAGCCTGACTTTATTTGCATGGACACACTGCTGTCCCCCACTTGGAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PEAKPDFICMDTLLSPTWRLCRS*NFTSWM
Trigger: CATCCAGGATGTGAAATTCAAGCTTCGGCACAACCT...CCAAGTGGGGGACAGCAGTGTGTCCATGCAAATAAAGTCAGGCTTTGCTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 90 bp TCTCTGCAGGCGTTCAAAGAAAGCCCAGAACTTCTGACACTCCTCTaGACCACGACGGATATAATCCTCATCGCGGAAGAATACATCTTC +
Preference number: 5 (lower is better)
Translates to: SLQAFKESPELLTLL*TTTDIILIAEEYIF
Trigger: GAAGATGTATTCTTCCGCGATGAGGATTATATCCGTCGTGGTTCAGAGGAGTGTCAGAAGTTCTGGGCTTTCTTTGAACGCCTGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp ACGCCGGGGCCCGTGCGGCCCGCTCGGCCCTTGCGCTaGTCAGCACTGGCCTGGCTGATCCAGAATTCCTGC +
Preference number: 6 (lower is better)
Translates to: TPGPVRPARPLR*SALAWLIQNSC
Trigger: GCAGGAATTCTGGATCAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGCGGGCCGCACGGGCCCCGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp ACTCGGCATAGAGACGGTAGCAGACGCCGGGGCCCGTaGGGCCCGCTCGGCCCTTGCGCTGCTCAGCACTGG +
Preference number: 6 (lower is better)
Translates to: TRHRDGSRRRGP*GPLGPCAAQHW
Trigger: CCAGTGCTGAGCAGCGCAAGGGCCGAGCGGGCCGCACGGGCCCCGGCGTCTGCTACCGTCTCTATGCCGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CGTCCCCCACCCTCCTCATGCTGTCGCTTCAGCTGGTaGAGGGCCCTGCGCTCTCGGCGCTGCTGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: RPPPSSCCRFSW*RALRSRRCCSR
Trigger: TCGGCTGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCATGAGGAGGGTGGGGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp CCAGCTGTGGGTACAGCCCCCGCCCGAGCACCAGCTTaGGCAGGGCCAGTTGGTCTCGGGTCAGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PAVGTAPARAPA*AGPVGLGSGPG
Trigger: CCCAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGCGGGGGCTGTACCCACAGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp TGCTCTAGCTTCCGTCGCTGGGCCTGGCGGGCCAGCTaGCGGTCCAGGGCACTTTCCCAGTGGACACGGAGC +
Preference number: 6 (lower is better)
Translates to: CSSFRRWAWRAS*RSRALSQWTRS
Trigger: GCTCCGTGTCCACTGGGAAAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAAGCTAGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp GCCAGCTGTGGGTACAGCCCCCGCCCGAGCACCAGCTaGAGCAGGGCCAGTTGGTCTCGGGTCAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: ASCGYSPRPSTS*SRASWSRVRSW
Trigger: CCAGGACCTGACCCGAGACCAACTGGCCCTGCTCAAGCTGGTGCTCGGGCGGGGGCTGTACCCACAGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp GCCAGGAGCCGGACGGCACTCTCGCTATCTGCGAGCTaGAGCTCTAGCCAACCGTCAGCCACCAGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: ARSRTALSLSAS*SSSQPSATRRE
Trigger: CTCCCGCCTGGTGGCTGACGGTTGGCTAGAGCTGCAGCTCGCAGATAGCGAGAGTGCCGTCCGGCTCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp TGGGGGCTGACTGCTGGAGACCCCATGTCTTCCTCCTaGTCTAGCTTCCGTCGCTGGGCCTGGCGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: WGLTAGDPMSSS*SSFRRWAWRAS
Trigger: GCTGGCCCGCCAGGCCCAGCGACGGAAGCTAGAGCAGGAGGAAGACATGGGGTCTCCAGCAGTCAGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp GCGGCCACTGTTGAACGCATCGGGCACAGCCAGCTGTaGGTACAGCCCCCGCCCGAGCACCAGCTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: AATVERIGHSQL*VQPPPEHQLEQ
Trigger: CTGCTCAAGCTGGTGCTCGGGCGGGGGCTGTACCCACAGCTGGCTGTGCCCGATGCGTTCAACAGTGGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp GACCCCATGTCTTCCTCCTGCTCTAGCTTCCGTCGCTaGGCCTGGCGGGCCAGCTGCCGGTCCAGGGCACTT +
Preference number: 6 (lower is better)
Translates to: DPMSSSCSSFRR*AWRASCRSRAL
Trigger: AAGTGCCCTGGACCGGCAGCTGGCCCGCCAGGCCCAGCGACGGAAGCTAGAGCAGGAGGAAGACATGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CCTCCTCATGCTGTCGCTTCAGCTGGTGCAGGGCCCTaGGCTCTCGGCGCTGCTGCAGCCGACTGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: PPHAVASAGAGP*ALGAAAADCSC
Trigger: ACAGCTACAGTCGGCTGCAGCAGCGCCGAGAGCGCAGGGCCCTGCACCAGCTGAAGCGACAGCATGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CAGCCCCCTGCCGGGCCCATGACGACCCCGAGTGTCTaGGCTGAGAATGGAGAGGTTGATGCGGTAGCGTGG +
Preference number: 6 (lower is better)
Translates to: QPPAGPMTTPSV*AENGEVDAVAW
Trigger: CCACGCTACCGCATCAACCTCTCCATTCTCAGCCCAGACACTCGGGGTCGTCATGGGCCCGGCAGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CCTCGTCCACGATCAGGACCTGGTACTGGGGCAGGCTaGGCTCACGCTGGATCTGGCGTAGGAGCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PRPRSGPGTGAG*AHAGSGVGAAP
Trigger: TGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CGGCCCGCTCGGCCCTTGCGCTGCTCAGCACTGGCCTaGCTGATCCAGAATTCCTGCAGCCGCTGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RPARPLRCSALA*LIQNSCSRCSL
Trigger: CAAACTGCAGCGGCTGCAGGAATTCTGGATCAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGCGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp AGGCGATTCTCCGGGGCTGAGTGCATGCCACGTGACTaGAGCCGGCGGCCAGCAAGTACTGGGGCACCTGAG +
Preference number: 6 (lower is better)
Translates to: RRFSGAECMPRD*SRRPASTGAPE
Trigger: CTCAGGTGCCCCAGTACTTGCTGGCCGCCGGCTTCAGTCACGTGGCATGCACTCAGCCCCGGAGAATCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp CCGCTCGGCCCTTGCGCTGCTCAGCACTGGCCTGGCTaGTCCAGAATTCCTGCAGCCGCTGCAGTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: PLGPCAAQHWPG*SRIPAAAAVWP
Trigger: AGGCCAAACTGCAGCGGCTGCAGGAATTCTGGATCAGCCAGGCCAGTGCTGAGCAGCGCAAGGGCCGAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp AACACCTTGTCCTGGTCAGACACAGAGAGGGCGCTGTaGAGCGGCAGCACCACCCAGCGCTGGGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: NTLSWSDTERAL*SGSTTQRWVRL
Trigger: CAGCCTCACCCAGCGCTGGGTGGTGCTGCCGCTGCACAGCGCCCTCTCTGTGTCTGACCAGGACAAGGTGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp ACCTGGTACTGGGGCAGGCTGGGCTCACGCTGGATCTaGCGTAGGAGCAGCCCCACCGTCAGGAACACGATC +
Preference number: 6 (lower is better)
Translates to: TWYWGRLGSRWI*RRSSPTVRNTI
Trigger: GATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp ATCAGGACCTGGTACTGGGGCAGGCTGGGCTCACGCTaGATCTGGCGTAGGAGCAGCCCCACCGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: IRTWYWGRLGSR*IWRRSSPTVRN
Trigger: GTTCCTGACGGTGGGGCTGCTCCTACGCCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp AGGTGTCGCTCGTGGACCTCGTCCACGATCAGGACCTaGTACTGGGGCAGGCTGGGCTCACGCTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: RCRSWTSSTIRT*YWGRLGSRWIW
Trigger: CCAGATCCAGCGTGAGCCCAGCCTGCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGCGACACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp AGCGGTCTCCGGGCAGTGGCACAGTCCAGGTTGCTCTaGGCACTGCGGGTGAATGGTGACTGGACGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SGLRAVAQSRLL*ALRVNGDWTLR
Trigger: CCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCACTGCCCGGAGACCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 90 bp CCCTGGTCACTTTCCAGCGGTCTCCGGGCAGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTGAATGGTGACTGGACGCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PWSLSSGLRAVAQSR*LWALRVNGDWTLRA
Trigger: TGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCACTGCCCGGAGACCGCTGGAAAGTGACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp CCTGGGGCCACTACCTGGGCCCCACTCAGCAATCCATaGTCCTCCAACAGCTCCTTGAACTGGCGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: PGATTWAPLSNP*SSNSSLNWRRR
Trigger: CCTGCGGCGCCAGTTCAAGGAGCTGTTGGAGGATCATGGATTGCTGAGTGGGGCCCAGGTAGTGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CGGACTCCAGCTGGAGCCACATCGAACACCTTGTCCTaGTCAGACACAGAGAGGGCGCTGTGCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: RTPAGATSNTLS*SDTERALCSGS
Trigger: GCTGCCGCTGCACAGCGCCCTCTCTGTGTCTGACCAGGACAAGGTGTTCGATGTGGCTCCAGCTGGAGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CTTCTGTGGTGGTGCAGGAGCAGCCTCCTCAGACCCTaGATCATCGCCTGGCGCCTCAGGGCAGGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LLWWCRSSLLRP*IIAWRLRAGVL
Trigger: GAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGGTCTGAGGAGGCTGCTCCTGCACCACCACAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS CAA 72 bp GGCAGCAGGCGCTGCAGGACACCCAGCAGGAAGTCATaGTGCAGGTGTCGCTCGTGGACCTCGTCCACGATC +
Preference number: 6 (lower is better)
Translates to: GSRRCRTPSRKS*CRCRSWTSSTI
Trigger: GATCGTGGACGAGGTCCACGAGCGACACCTGCACAATGACTTCCTGCTGGGTGTCCTGCAGCGCCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp CTTTCCAGCGGTCTCCGGGCAGTGGCACAGTCCAGGTaGCTCTGGGCACTGCGGGTGAATGGTGACTGGACG +
Preference number: 6 (lower is better)
Translates to: LSSGLRAVAQSR*LWALRVNGDWT
Trigger: CGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGTGCCACTGCCCGGAGACCGCTGGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 90 bp TTGGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCACTGTaGAACGCATCGGGCACAGCCAGCTGTGGGTACAGCCCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: LACVWKIWSESLRPL*NASGTASCGYSPRP
Trigger: CGGGCGGGGGCTGTACCCACAGCTGGCTGTGCCCGATGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 90 bp GGGCTGTTGGCAAAGACACAGGTGGGGTGCAGCACGGTGCCCTGCTaGGCCTGCGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCACTG +
Preference number: 6 (lower is better)
Translates to: GLLAKTQVGCSTVPC*ACVWKIWSESLRPL
Trigger: CAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp CTGACTGAGGCTCTCGAAGCCAACGCGCTTGGCCAGTaGGATGCAGGCGATTCTCCGGGGCTGAGTGCATGC +
Preference number: 6 (lower is better)
Translates to: LTEALEANALGQ*DAGDSPGLSAC
Trigger: GCATGCACTCAGCCCCGGAGAATCGCCTGCATCTCACTGGCCAAGCGCGTTGGCTTCGAGAGCCTCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp GGGGTCCCACGTAGAGGTTCTGGGCTTCTAGACCAGTaGGCCTTCGGAGGCGGTAGGGAACCTTGGCCACCA +
Preference number: 6 (lower is better)
Translates to: GVPRRGSGLLDQ*AFGGGREPWPP
Trigger: TGGTGGCCAAGGTTCCCTACCGCCTCCGAAGGCTCACTGGTCTAGAAGCCCAGAACCTCTACGTGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp AGCAGGCGCTGCAGGACACCCAGCAGGAAGTCATTGTaGAGGTGTCGCTCGTGGACCTCGTCCACGATCAGG +
Preference number: 6 (lower is better)
Translates to: SRRCRTPSRKSL*RCRSWTSSTIR
Trigger: CCTGATCGTGGACGAGGTCCACGAGCGACACCTGCACAATGACTTCCTGCTGGGTGTCCTGCAGCGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp ACACAGGTGGGGTGCAGCACGGTGCCCTGCTTGGCCTaGGTGTGGAAAATCTGGTCTGAGTCCTTGCGGCCA +
Preference number: 6 (lower is better)
Translates to: TQVGCSTVPCLA*VWKIWSESLRP
Trigger: TGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp AATTCCAGTCCCATTTCTCCGGGGCCTCTTCCTCCCTaGGAGCTCGATGGTGGTCTCGGTCTCGGTGACCCC +
Preference number: 6 (lower is better)
Translates to: NSSPISPGPLPP*ELDGGLGLGDP
Trigger: GGGGTCACCGAGACCGAGACCACCATCGAGCTCCCAGGGAGGAAGAGGCCCCGGAGAAATGGGACTGGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp TTGCCACAGCCTGTGTCCCCGGCCACCACCACCACCTaGTGTTCCTTGAGAGTCTGCAGGATGCGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: LPQPVSPATTTT*CSLRVCRMRFP
Trigger: TGGGAACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGCCGGGGACACAGGCTGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CAGTGCATCCAGGGCCACCCTGCGGATTTCCGGGACTaGGTACGGCGCAAAGGCATCATAGTCAGACTCGGC +
Preference number: 6 (lower is better)
Translates to: QCIQGHPADFRD*VRRKGIIVRLG
Trigger: GCCGAGTCTGACTATGATGCCTTTGCGCCGTACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp TCCAGGTTGCTCTGGGCACTGCGGGTGAATGGTGACTaGACGCTGAGGGCAGCAGCAATGGTGAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: SRLLWALRVNGD*TLRAAAMVSTG
Trigger: GCCTGTGCTCACCATTGCTGCTGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp TGCAGGAGCAGCCTCCTCAGACCCTGGATCATCGCCTaGCGCCTCAGGGCAGGTGTTCTCATGAGCAATGCG +
Preference number: 6 (lower is better)
Translates to: CRSSLLRPWIIA*RLRAGVLMSNA
Trigger: CGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGGTCTGAGGAGGCTGCTCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094816.3
ENSMUST00000163968.8
CDS CCA 72 bp CTTCTGTGGTGGTGCAGGAGCAGCCTCAGACTTGCCTaGATCATCGCCTGGCGCCTCAGGGCAGGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LLWWCRSSLRLA*IIAWRLRAGVL
Trigger: GAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCCTGCACCACCACAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS CAA 72 bp GATGTCTTCTGTGGTGGTGCAGGAGCAGCCTCAGACTaGCCTGGATCATCGCCTGGCGCCTCAGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: DVFCGGAGAASD*PGSSPGASGQV
Trigger: CACCTGCCCTGAGGCGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCCTGCACCACCACAGAAGACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS TCA 72 bp GGGCGATGGGAAGTGCCGCTCGCTCACGCTGCAGTTTaGCGAGCCTCCCAAAAGCCTGCTTCTGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: GRWEVPLAHAAV*RASQKPASAGS
Trigger: ACTTCCAGCAGAAGCAGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp ACAGTCCAGGTTGCTCTGGGCACTGCGGGTGAATGGTaGCTGGACGCTGAGGGCAGCAGCAATGGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: TVQVALGTAGEW*LDAEGSSNGEH
Trigger: GTGCTCACCATTGCTGCTGCCCTCAGCGTCCAGTCACCATTCACCCGCAGTGCCCAGAGCAACCTGGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp GGTGCCCTGCTTGGCCTGCGTGTGGAAAATCTGGTCTaGGTCCTTGCGGCCACTGTTGAACGCATCGGGCAC +
Preference number: 6 (lower is better)
Translates to: GALLGLRVENLV*VLAATVERIGH
Trigger: GTGCCCGATGCGTTCAACAGTGGCCGCAAGGACTCAGACCAGATTTTCCACACGCAGGCCAAGCAGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp GGATCATCGCCTGGCGCCTCAGGGCAGGTGTTCTCATaGGCAATGCGCTCCAAGGGTGTGAAGGGCATGTGC +
Preference number: 6 (lower is better)
Translates to: GSSPGASGQVFS*AMRSKGVKGMC
Trigger: GCACATGCCCTTCACACCCTTGGAGCGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CCATACTGGGCGATGGGAAGTGCCGCTCGCTCACGCTaGAGTTTGACGAGCCTCCCAAAAGCCTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PYWAMGSAARSR*SLTSLPKACFC
Trigger: GCAGAAGCAGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CCGGCCACCACCACCACCTGGTGTTCCTTGAGAGTCTaGAGGATGCGGTTCCCATACTGGGCGATGGGAAGT +
Preference number: 6 (lower is better)
Translates to: PATTTTWCSLRV*RMRFPYWAMGS
Trigger: ACTTCCCATCGCCCAGTATGGGAACCGCATCCTGCAGACTCTCAAGGAACACCAGGTGGTGGTGGTGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp GAGCAGCCCCACCGTCAGGAACACGATCTTGGTGGCTaGCGACCGAGTGCTTTCAAAGCGGATCTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: EQPHRQEHDLGG*RPSAFKADLVA
Trigger: GGCTACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp GGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTTaGTGGCTGCCGACCGAGTGCTTTCAAAGCGGATCT +
Preference number: 6 (lower is better)
Translates to: GVGAAPPSGTRS*WLPTECFQSGS
Trigger: AGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp ACACCCAGCAGGAAGTCATTGTGCAGGTGTCGCTCGTaGACCTCGTCCACGATCAGGACCTGGTACTGGGGC +
Preference number: 6 (lower is better)
Translates to: TPSRKSLCRCRS*TSSTIRTWYWG
Trigger: GCCCCAGTACCAGGTCCTGATCGTGGACGAGGTCCACGAGCGACACCTGCACAATGACTTCCTGCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp TGCAGGAGCAGCCTCAGACTTGCCTGGATCATCGCCTaGCGCCTCAGGGCAGGTGTTCTCATGAGCAATGCG +
Preference number: 6 (lower is better)
Translates to: CRSSLRLAWIIA*RLRAGVLMSNA
Trigger: CGCATTGCTCATGAGAACACCTGCCCTGAGGCGCCAGGCGATGATCCAGGCAAGTCTGAGGCTGCTCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
CDS CAA 72 bp TGGGCGATGGGAAGTGCCGCTCGCTCACGCTGCAGTTaGACGAGCCTCCCAAAAGCCTGCTTCTGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: WAMGSAARSRCS*TSLPKACFCWK
Trigger: CTTCCAGCAGAAGCAGGCTTTTGGGAGGCTCGTCAAACTGCAGCGTGAGCGAGCGGCACTTCCCATCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp TGGCGTAGGAGCAGCCCCACCGTCAGGAACACGATCTaGGTGGCTGCCGACCGAGTGCTTTCAAAGCGGATC +
Preference number: 6 (lower is better)
Translates to: WRRSSPTVRNTI*VAADRVLSKRI
Trigger: GATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp AGCGGATCTGGTAGCCAACCTGGGAGCCATACTGACTaGGGCTCTCGAAGCCAACGCGCTTGGCCAGTGAGA +
Preference number: 6 (lower is better)
Translates to: SGSGSQPGSHTD*GSRSQRAWPVR
Trigger: TCTCACTGGCCAAGCGCGTTGGCTTCGAGAGCCTCAGTCAGTATGGCTCCCAGGTTGGCTACCAGATCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CCGTCAGGAACACGATCTTGGTGGCTGCCGACCGAGTaGTTTCAAAGCGGATCTGGTAGCCAACCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PSGTRSWWLPTE*FQSGSGSQPGS
Trigger: GCTCCCAGGTTGGCTACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp TCTTCATCTGAAGCACCAGTGCATCCAGGGCCACCCTaGGGATTTCCGGGACTGGGTACGGCGCAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: SSSEAPVHPGPP*GFPGLGTAQRH
Trigger: ATGCCTTTGCGCCGTACCCAGTCCCGGAAATCCGCAGGGTGGCCCTGGATGCACTGGTGCTTCAGATGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp GACGCTGAGGGCAGCAGCAATGGTGAGCACAGGCTCTaGCAGGCTGAACATGGAGCCGAGGATCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: DAEGSSNGEHRL*QAEHGAEDQHL
Trigger: AAGATGCTGATCCTCGGCTCCATGTTCAGCCTGGCAGAGCCTGTGCTCACCATTGCTGCTGCCCTCAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp AATACCTCAGGGCTGTTGGCAAAGACACAGGTGGGGTaGAGCACGGTGCCCTGCTTGGCCTGCGTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: NTSGLLAKTQVG*STVPCLACVWK
Trigger: TTTCCACACGCAGGCCAAGCAGGGCACCGTGCTGCACCCCACCTGTGTCTTTGCCAACAGCCCTGAGGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp GTAGGAGCAGCCCCACCGTCAGGAACACGATCTTGGTaGCTGCCGACCGAGTGCTTTCAAAGCGGATCTGGT +
Preference number: 6 (lower is better)
Translates to: VGAAPPSGTRSW*LPTECFQSGSG
Trigger: ACCAGATCCGCTTTGAAAGCACTCGGTCGGCAGCCACCAAGATCGTGTTCCTGACGGTGGGGCTGCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp AGGGCCGGGATTCTGACGCAGTTCACCAGGTATGGCTaGTTGGTCTCCAGTAGGGAGACGAAGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RAGILTQFTRYG*LVSSRETKASS
Trigger: GCTGCTGGCCTTCGTCTCCCTACTGGAGACCAACAAGCCATACCTGGTGAACTGCGTCAGAATCCCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp CAGCTCATTTGGTCCCTGCCATCTTGGCTCCCTTCTTaGCCTGAGGCCTCCTGCCCCTGTGTGTGTAATACC +
Preference number: 6 (lower is better)
Translates to: QLIWSLPSWLPS*PEASCPCVCNT
Trigger: GGTATTACACACACAGGGGCAGGAGGCCTCAGGCCAAGAAGGGAGCCAAGATGGCAGGGACCAAATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp CAGCTGCCTGCAGCTGCTCCAGGTTGTGCCGAAGCTTaGATTTCACATCCTGGATGTCAACGCTGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: QLPAAAPGCAEA*ISHPGCQRCQP
Trigger: GGGCTGACAGCGTTGACATCCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp TCTCCAGTAGGGAGACGAAGGCCAGCAGCTGATGCTTaGAGCTCATTTGGTCCCTGCCATCTTGGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: SPVGRRRPAADA*SSFGPCHLGSL
Trigger: AAGGGAGCCAAGATGGCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGTCTCCCTACTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp GCAGCTGCCTGCAGCTGCTCCAGGTTGTGCCGAAGCTaGAATTTCACATCCTGGATGTCAACGCTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: AAACSCSRLCRS*NFTSWMSTLSA
Trigger: GGCTGACAGCGTTGACATCCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCAGCTGCAGGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 90 bp TTTCCGCTCCGCTCAGACTTCACCTGCACCCAGGCATTGAAGACATaGAAGAGTGTGAAGGGGTCACCCTGGTCACTTTCCAGCGGTCTC +
Preference number: 6 (lower is better)
Translates to: FPLRSDFTCTQALKT*KSVKGSPWSLSSGL
Trigger: GAGACCGCTGGAAAGTGACCAGGGTGACCCCTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCAGGTGAAGTCTGAGCGGAGCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp TTGTTGGTCTCCAGTAGGGAGACGAAGGCCAGCAGCTaGTGCTTGCAGCTCATTTGGTCCCTGCCATCTTGG +
Preference number: 6 (lower is better)
Translates to: LLVSSRETKASS*CLQLIWSLPSW
Trigger: CCAAGATGGCAGGGACCAAATGAGCTGCAAGCATCAGCTGCTGGCCTTCGTCTCCCTACTGGAGACCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp AATTTCACATCCTGGATGTCAACGCTGTCAGCCCTCTaGGAGGTAGAGCCCTCTCGGTCCTCTTCATCGCTG +
Preference number: 6 (lower is better)
Translates to: NFTSWMSTLSAL*EVEPSRSSSSL
Trigger: CAGCGATGAAGAGGACCGAGAGGGCTCTACCTCCCAGAGGGCTGACAGCGTTGACATCCAGGATGTGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp GTGAGAGGTAGGTCAGCTAAAGCAGCGATGCCATGTTaGGGCATGCCAGGGTCCTTCTCCTTCTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: VRGRSAKAAMPC*GMPGSFSFFWE
Trigger: CTCCCAGAAGAAGGAGAAGGACCCTGGCATGCCCAAACATGGCATCGCTGCTTTAGCTGACCTACCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp TTTCCGCTCCGCTCAGACTTCACCTGCACCCAGGCATaGAAGACATTGAAGAGTGTGAAGGGGTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: FPLRSDFTCTQA*KTLKSVKGSPW
Trigger: CCAGGGTGACCCCTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCAGGTGAAGTCTGAGCGGAGCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CCA 72 bp TGCTCCAGGTTGTGCCGAAGCTTGAATTTCACATCCTaGATGTCAACGCTGTCAGCCCTCTGGGAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: CSRLCRSLNFTS*MSTLSALWEVE
Trigger: CTCTACCTCCCAGAGGGCTGACAGCGTTGACATCCAGGATGTGAAATTCAAGCTTCGGCACAACCTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp GGCATGCCAGGGTCCTTCTCCTTCTTCTGGGAGGTCTaGAGGTGCTGGAATCTCTGCAGGCGTTCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: GMPGSFSFFWEV*RCWNLCRRSKK
Trigger: TTTCTTTGAACGCCTGCAGAGATTCCAGCACCTCAAGACCTCCCAGAAGAAGGAGAAGGACCCTGGCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 72 bp CGCTCAGACTTCACCTGCACCCAGGCATTGAAGACATaGAAGAGTGTGAAGGGGTCACCCTGGTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: RSDFTCTQALKT*KSVKGSPWSLS
Trigger: GGAAAGTGACCAGGGTGACCCCTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCAGGTGAAGTCTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS CAA 90 bp TTTCGAGAGTTTCCGCTCCGCTCAGACTTCACCTGCACCCAGGCATaGAAGACATTGAAGAGTGTGAAGGGGTCACCCTGGTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: FREFPLRSDFTCTQA*KTLKSVKGSPWSLS
Trigger: GGAAAGTGACCAGGGTGACCCCTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCAGGTGAAGTCTGAGCGGAGCGGAAACTCTCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS GCA 72 bp CACTTTCGAGAGTTTCCGCTCCGCTCAGACTTCACCTaGACCCAGGCATTGAAGACATTGAAGAGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: HFREFPLRSDFT*TQALKTLKSVK
Trigger: CTTCACACTCTTCAATGTCTTCAATGCCTGGGTGCAGGTGAAGTCTGAGCGGAGCGGAAACTCTCGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8
CDS TCA 72 bp GCGTTCAAAGAAAGCCCAGAACTTCTGACACTCCTCTaGACCACGACGGATATAATCCTCATCGCGGAAGAA +
Preference number: 6 (lower is better)
Translates to: AFKESPELLTLL*TTTDIILIAEE
Trigger: TTCTTCCGCGATGAGGATTATATCCGTCGTGGTTCAGAGGAGTGTCAGAAGTTCTGGGCTTTCTTTGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000094816.3
ENSMUST00000118795.8
ENSMUST00000119102.8
ENSMUST00000121123.8
ENSMUST00000163968.8