Pregenerated sensors for DHX33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040620Ensembl transcript IDs: ENSMUST00000049048.13, ENSMUST00000108527.8, ENSMUST00000124464.2, ENSMUST00000146203.8, ENSMUST00000155044.2
Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCCCCGGGTGTCGCAGGCCACGGTTACCAAGAAGATAAACCCCTaGAGCACGCAGGGCTGTTGTGGAAGTTCATCTGTCTGTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VPRVSQATVTKKINP*STQGCCGSSSVCWR Trigger: CCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTGCAGGGGTTTATCTTCTTGGTAACCGTGGCCTGCGACACCCGGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR TCA 90 bp | AGCATCCTGGAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCTaGAGTAGTCAGGGGCAGCCTCGTAGAGCCACTCGGCATCCACCA | + |
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Preference number: 1 (lower is better) Translates to: SILERFSFWPFSASS*SSQGQPRRATRHPP Trigger: TGGTGGATGCCGAGTGGCTCTACGAGGCTGCCCCTGACTACTTCAGGAGGAAGCTGAGAACGGCCAGAAACTGAACCGTTCCAGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
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| 3UTR GCA 90 bp | GCCATCTGGGAGGTGCCTTGCGATGTCTCTGCAGGTCTTGCTCATTaGTTCGATCTCCTCCTGACCAGTGAGGAACACCAGGATGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AIWEVPCDVSAGLAH*FDLLLTSEEHQDVL Trigger: CAAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACATCGCAAGGCACCTCCCAGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR GCA 90 bp | GGACATGCAGCCACAGAGGCACTGGGGACCAACCAAGGAACTACTTaGTGGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCCT | + |
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Preference number: 1 (lower is better) Translates to: GHAATEALGTNQGTT*WPLLGDRQDNVLHP Trigger: AGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | GCCACTCGGCATCCACCACACAGAGGTCACGCATGTAGCATTTGTTaGTGTAGAGCAGTGAAGTGTAGACCACGCAGGCAGGCTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: ATRHPPHRGHACSIC*CRAVKCRPRRQACS Trigger: ACTGCAAGCCTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACATGCGTGACCTCTGTGTGGTGGATGCCGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
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| 3UTR CCA 90 bp | CATGCAGCCACAGAGGCACTGGGGACCAACCAAGGAACTACTTGCTaGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: HAATEALGTNQGTTC*PLLGDRQDNVLHPE Trigger: CTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | TGGTTTCCTGAAAGCACTGTTGGGGACATGCAGCCACAGAGGCACTaGGGACCAACCAAGGAACTACTTGCTGGCCTCTGCTTGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: WFPESTVGDMQPQRH*GPTKELLAGLCLET Trigger: TGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTTCAGGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR GCA 90 bp | AGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGTTGGGGACATaGAGCCACAGAGGCACTGGGGACCAACCAAGGAACTACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSRKPAGFLKALLGT*SHRGTGDQPRNYLL Trigger: CAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | CAATGGAAGTGCCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTGCTaGACTCAAAGAAACTGCCCACTGTCTTCGAAGTGCCTTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: QWKCPARLGSLERAC*TQRNCPLSSKCLEG Trigger: GCCTTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTTCCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | ACCAGACTCAACAGACACAGCTGTGAACCAATGAGATCCTGGCAATaGAAGTGCCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: TRLNRHSCEPMRSWQ*KCPARLGSLERACW Trigger: CCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTTCCATTGCCAGGATCTCATTGGTTCACAGCTGTGTCTGTTGAGTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR TCA 90 bp | CAGGATGTCTTGAGAAGCAGGAGCTTCCTGGTGGATCTGGAAGACTaGGACAAGGGCTGCATGCAGGTAATCCTGCTGAGGCTGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: QDVLRSRSFLVDLED*DKGCMQVILLRLFG Trigger: ACCAAACAGCCTCAGCAGGATTACCTGCATGCAGCCCTTGTCTCAGTCTTCCAGATCCACCAGGAAGCTCCTGCTTCTCAAGACATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR TCA 90 bp | CACCACACAGAGGTCACGCATGTAGCATTTGTTGGTGTAGAGCAGTaGAGTGTAGACCACGCAGGCAGGCTTGCAGTGGAAGAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: HHTEVTHVAFVGVEQ*SVDHAGRLAVEEDR Trigger: TCTGTCCTCTTCCACTGCAAGCCTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACATGCGTGACCTCTGTGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
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| 3UTR GCA 90 bp | GCCAGGCTAGGCTCTCTGGAAAGAGCTTGCTGGACTCAAAGAAACTaGCCACTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTG | + |
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Preference number: 1 (lower is better) Translates to: ARLGSLERACWTQRN*PLSSKCLEGSLAHL Trigger: CAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR GCA 90 bp | TGGCAATGGAAGTGCCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTaGTGGACTCAAAGAAACTGCCCACTGTCTTCGAAGTGCCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: WQWKCPARLGSLERA*WTQRNCPLSSKCLE Trigger: TTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTTCCATTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR GCA 90 bp | CTCAACAGACACAGCTGTGAACCAATGAGATCCTGGCAATGGAAGTaGCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTGCTGGACTCAA | + |
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Preference number: 1 (lower is better) Translates to: LNRHSCEPMRSWQWK*PARLGSLERACWTQ Trigger: TTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTTCCATTGCCAGGATCTCATTGGTTCACAGCTGTGTCTGTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | CAGAAACATTGGGTCCTTAGAAACTGTATCCATCACTCCCTTTTCTaGGAGGTCCCAGTCCTCTGCAGCAGTCCCTCCAGGGTAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: QKHWVLRNCIHHSLF*EVPVLCSSPSRVRS Trigger: GGACCTTACCCTGGAGGGACTGCTGCAGAGGACTGGGACCTCCCAGAAAAGGGAGTGATGGATACAGTTTCTAAGGACCCAATGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | AACCCCTGCAGCACGCAGGGCTGTTGTGGAAGTTCATCTGTCTGTTaGAGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NPCSTQGCCGSSSVC*RLFCPGWSLQVGEF Trigger: AAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTGCAGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR TCA 90 bp | GCCGTCAGGTACCTCCTTCCTCTTCCCCATGTAGCAGCTCTGACTTaGACTCTCTTCCCTCACAGGCACACATTTGTAGGTGCTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: AVRYLLPLPHVAALT*TLFPHRHTFVGAQL Trigger: TAACTGAGCACCTACAAATGTGTGCCTGTGAGGGAAGAGAGTTCAAGTCAGAGCTGCTACATGGGGAAGAGGAAGGAGGTACCTGACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | ACCCAAACTAAGACTAGGTGTAGGAGAAAGGACAAACTGATCCTCTaGCTTCCGAGCCGTCAGGTACCTCCTTCCTCTTCCCCATGTAGC | + |
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Preference number: 1 (lower is better) Translates to: TQTKTRCRRKDKLIL*LPSRQVPPSSSPCS Trigger: GCTACATGGGGAAGAGGAAGGAGGTACCTGACGGCTCGGAAGCCAGAGGATCAGTTTGTCCTTTCTCCTACACCTAGTCTTAGTTTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR TCA 90 bp | AACAAACAACCCAAACTAAGACTAGGTGTAGGAGAAAGGACAAACTaGTCCTCTGGCTTCCGAGCCGTCAGGTACCTCCTTCCTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: NKQPKLRLGVGERTN*SSGFRAVRYLLPLP Trigger: GGGAAGAGGAAGGAGGTACCTGACGGCTCGGAAGCCAGAGGATCAGTTTGTCCTTTCTCCTACACCTAGTCTTAGTTTGGGTTGTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR GCA 90 bp | AGCTCTGACTTGAACTCTCTTCCCTCACAGGCACACATTTGTAGGTaGTCAGTTAAAGAGAAAACTACCACGGGGCTTCAGAAGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: SSDLNSLPSQAHICR*SVKEKTTTGLQKAT Trigger: GGTGGCCTTCTGAAGCCCCGTGGTAGTTTTCTCTTTAACTGAGCACCTACAAATGTGTGCCTGTGAGGGAAGAGAGTTCAAGTCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | AGACTGAGACAAGGGCTGCATGCAGGTAATCCTGCTGAGGCTGTTTaGTATAGAAGATCTGGATTGGATGCTGCCGACCCTCAAGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: RLRQGLHAGNPAEAV*YRRSGLDAADPQGK Trigger: TTTACCTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGATTACCTGCATGCAGCCCTTGTCTCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR CCA 90 bp | CAGGAGGGTTGTAAAGGACACTGTCCACAGATAGCAGGGAGACTATaGTCAGAATCTCTTCGGTACAGTGGAATTTGGAGGACAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: QEGCKGHCPQIAGRL*SESLRYSGIWRTGG Trigger: TCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCTATCTGTGGACAGTGTCCTTTACAACCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000155044.2 |
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| 3UTR TCA 90 bp | GGCCTCGTCCAAAATGACACAGCTGTACTTCCGAAGCAAGGAGTCTaGAATTGCTTCACGCAGAAGCATGCCATCTGTCAGGAACTTGAT | + |
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Preference number: 1 (lower is better) Translates to: GLVQNDTAVLPKQGV*NCFTQKHAICQELD Trigger: ATCAAGTTCCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTCCTTGCTTCGGAAGTACAGCTGTGTCATTTTGGACGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR TCA 90 bp | TTGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCCTaGGCCATAAGGGTCAACAGGTCAGAATATACCTTACTCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LLASAWRQTRQCATP*AIRVNRSEYTLLWN Trigger: GTTCCAGAGTAAGGTATATTCTGACCTGTTGACCCTTATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | ATGCAGGTAATCCTGCTGAGGCTGTTTGGTATAGAAGATCTGGATTaGATGCTGCCGACCCTCAAGGTAAAGGACAGGGGCTCTATTGAA | + |
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Preference number: 1 (lower is better) Translates to: MQVILLRLFGIEDLD*MLPTLKVKDRGSIE Trigger: TTCAATAGAGCCCCTGTCCTTTACCTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGATTACCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR CCA 90 bp | AAAGGGAATGCTGCCATCTTTCTTCCAATTGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGAGCACCTAACAGGTCCAGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: KGNAAIFLPIGVRVS*SSLCSRAPNRSSWA Trigger: TGCCCAGCTGGACCTGTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATTGGAAGAAAGATGGCAGCATTCCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR GCA 90 bp | AAGGAACTACTTGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTaGTACACCCTGAGCCATAAGGGTCAACAGGTCAGAATATACCTT | + |
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Preference number: 1 (lower is better) Translates to: KELLAGLCLETDKTM*YTLSHKGQQVRIYL Trigger: AAGGTATATTCTGACCTGTTGACCCTTATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | TCCACAGATAGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGGATAGTTTTGGCAAATCTGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: STDSRETMVRISSVQ*NLEDRRIVLANLGS Trigger: AGAGCCCAGATTTGCCAAAACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCTATCTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR CCA 90 bp | AAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGGATTaGCTCAGTGGCAAAGTGTTTTGCATAGCATGCATGAGGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: KYTQVDIKVEVRAGD*LSGKVFCIACMRLW Trigger: CCAGAGCCTCATGCATGCTATGCAAAACACTTTGCCACTGAGCCAATCCCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
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| 3UTR TCA 90 bp | AGCAGCAAAGCTAATTGTCCCCAGGTTTCCGCAAAGGCAGACCACTaGAAATTAATAGCATCAAAAATACAAAGACTGGCCAGGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSKANCPQVSAKADH*KLIASKIQRLARWW Trigger: CCACCACCTGGCCAGTCTTTGTATTTTTGATGCTATTAATTTTCAGTGGTCTGCCTTTGCGGAAACCTGGGGACAATTAGCTTTGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR TCA 90 bp | TATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTaGAAAGTAGCTCAGGTTGTACTGCAGCAAAACCACAAAACATTT | + |
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Preference number: 1 (lower is better) Translates to: YSVQAGVFRLESLPT*KVAQVVLQQNHKTF Trigger: AAATGTTTTGTGGTTTTGCTGCAGTACAACCTGAGCTACTTTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CCA 90 bp | AGCTGGAGCACAAGGATTTGTGCCACAGTAAATACTTTGCTGTTTTaGAATCCTGTTATAAGAGATGCAAATGTTCTCACAGGGATCCTG | + |
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Preference number: 1 (lower is better) Translates to: SWSTRICATVNTLLF*NPVIRDANVLTGIL Trigger: CAGGATCCCTGTGAGAACATTTGCATCTCTTATAACAGGATTCCAAAACAGCAAAGTATTTACTGTGGCACAAATCCTTGTGCTCCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR-3UTR GCA 90 bp | CATAAAGAGGCTGTGAGCCATGCAACGGCGGACACTCTCCATGTCCCCTCGAGAAGAGTCGGTAGCAGATaGCACTGTCCTCTCGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HKEAVSHATADTLHVPSRRVGSR*HCPLAQ Trigger: CTGGGCGAGAGGACAGTGGCATCTGCTACCGACTCT...TCTCGAGGGGACATGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCTTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR CAA 90 bp | GGGACATGCAGCCACAGAGGCACTGGGGACCAACCAAGGAACTACTaGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCC | + |
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Preference number: 2 (lower is better) Translates to: GTCSHRGTGDQPRNY*LASAWRQTRQCATP Trigger: GGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CAA 90 bp | TGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGTaGGGGACATGCAGCCACAGAGGCACTGGGGACCAACCAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: WLPSSRKPAGFLKAL*GTCSHRGTGDQPRN Trigger: GTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CAA 90 bp | CAGAGGCACTGGGGACCAACCAAGGAACTACTTGCTGGCCTCTGCTaGGAGACAGACAAGACAATGTGCTACACCCTGAGCCATAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QRHWGPTKELLAGLC*ETDKTMCYTLSHKG Trigger: ACCCTTATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CAA 90 bp | GGCCACGGTTACCAAGAAGATAAACCCCTGCAGCACGCAGGGCTGTaGTGGAAGTTCATCTGTCTGTTGGAGGCTATTCTGTCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GHGYQEDKPLQHAGL*WKFICLLEAILSRL Trigger: CAGCCTGGACAGAATAGCCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTGCAGGGGTTTATCTTCTTGGTAACCGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATGCTGGCAGCATCCTGGAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCGAAGCAAGGAGTCTaGAATTGCTTCACGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AMLAASWNGSVSGRSQLPPKQGV*NCFTQK Trigger: CTTCTGCGTGAAGCAATTTCAGACTCCTTGCTTCGG...AGGAAGCTGAGAACGGCCAGAAACTGAACCGTTCCAGGATGCTGCCAGCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCATCCTGGAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCTGAAGGAAGCAGGAGCTTCCTaGTGGATCTGGAAGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: WQHPGTVQFLAVLSFLLKEAGAS*WIWKTE Trigger: CTCAGTCTTCCAGATCCACCAGGAAGCTCCTGCTTC...CTTCAGGAGGAAGCTGAGAACGGCCAGAAACTGAACCGTTCCAGGATGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCCGGACACTCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACCAGGAGGATAGTCTCTaGATCTCTGGCACCGTCATC | + |
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Preference number: 2 (lower is better) Translates to: FLPDTLHLISPGRRVVKDQEDSL*ISGTVI Trigger: GATGACGGTGCCAGAGATCCAGAGACTATCCTCCTG...GTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGAGTGTCCGGAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
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| 3UTR CAA 90 bp | AAACCCCTGCAGCACGCAGGGCTGTTGTGGAAGTTCATCTGTCTGTaGGAGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KPLQHAGLLWKFICL*EAILSRLESSGWRV Trigger: AACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTGCAGGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCCGGACACTCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACACACCTCTGGATCTCTaGCACCGTCATCTTCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: FLPDTLHLISPGRRVVKDTPLDL*HRHLLE Trigger: TTCGAGAAGATGACGGTGCCAGAGATCCAGAGGTGT...GTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGAGTGTCCGGAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR TCA 90 bp | TGGCACCGTCATCTTCTCGAACTTCTCAAACTCGTCCTCAGTGTAGAGTCGGTAGTGGATCTGGAAGACTaGGACAAGGGCTGCATGCAG | + |
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Preference number: 2 (lower is better) Translates to: WHRHLLELLKLVLSVESVVDLED*DKGCMQ Trigger: CTGCATGCAGCCCTTGTCTCAGTCTTCCAGATCCAC...TACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGATGACGGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGCTGCCATCTTTCTTCCAATTGGAGTCAGGGTAAGCTGGTCATCCTTAAGGAAGGACGAGCATTaGAGGGCAGCCATCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNAAIFLPIGVRVSWSSLRKDEH*RAAIWE Trigger: CTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCT...TAAGGATGACCAGCTTACCCTGACTCCAATTGGAAGAAAGATGGCAGCATTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR TCA 90 bp | AGTATTCATAAAGAGGCTGTGAGCCATGCAACGGCGGACACTCTCCATGTCCCCGGACAGGGGCTCTATTaGAGTACTGAGAAAACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SIHKEAVSHATADTLHVPGQGLY*STEKTG Trigger: ACCTGTTTTCTCAGTACTTCAATAGAGCCCCTGTCC...GGGGACATGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCTTTATGAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGGTCCTTAGAAACTGTATCCATCACTCCCTTTTCTGGGAGGTCCCAGTCCTTTGGAAGACAGCTGTaGTCTAAGCTCCAGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IGSLETVSITPFSGRSQSFGRQL*SKLQAQ Trigger: CTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAA...GGACTGGGACCTCCCAGAAAAGGGAGTGATGGATACAGTTTCTAAGGACCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCGGACACTCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACACTAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LPDTLHLISPGRRVVKDTRVILL*FNHARV Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...AGTGTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGAGTGTCCGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000155044.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTACTACTTGCTGGCCTCTaGTTGGAGACAGACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: QSVLHSMHEALGSTGEGVLLAGL*LETDKT Trigger: TGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAG...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTATTCATAAAGAGGCTGTGAGCCATGCAACGGCGGACACTCTCCATGTCCCCATAGAAGATCTGGATTaGATGCTGCCGACCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SIHKEAVSHATADTLHVPIEDLD*MLPTLK Trigger: CTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTAT...GGGGACATGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCTTTATGAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| 3UTR-3UTR CCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAGCAGGAGCTTCCTGGTaGATCTGGAAGACTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LMLYVGSFCTGESEKLQQAGASW*IWKTET Trigger: TGTCTCAGTCTTCCAGATCCACCAGGAAGCTCCTGC...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR TCA 90 bp | CATCTTCTCGAACTTCTCAAACTCGTCCTCAGTGTAGAGTCGGTAGCAGATGCCCATCTGTCAGGAACTTaGTCCTGGTGTCTTCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLLELLKLVLSVESVADAHLSGT*SWCLLR Trigger: CCTCAGAAGACACCAGGATCAAGTTCCTGACAGATG...GGCATCTGCTACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FSLQNCLVRPEAQAQLLMRCWLK*SLCDSP Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...CATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCATTTGTTGGTGTAGAGCAGTGAAGTGTAGACCACGCAGGCAGGCTTGCTGTCTCTGCAGGTCTTaGTCATTGCTTCGATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CSICWCRAVKCRPRRQACCLCRS*SLLRSP Trigger: AGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACA...GCAAGCCTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCCAGCCACAGAGGCACTaGGGACCAACCAAGGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: SGSLAANLCLEDSCDLSSQPQRH*GPTKEL Trigger: TAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTG...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGGGTAAGGTCCTAGGCCTCACCCTGGAGCCAGTCACTGCAAGCTACTGTGAAACTGTTAATTGCTaGGGAATATATTGCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LQGKVLGLTLEPVTASYCETVNC*GIYCLL Trigger: AAGGAGGCAATATATTCCCCAGCAATTAACAGTTTC...ACAGTAGCTTGCAGTGACTGGCTCCAGGGTGAGGCCTAGGACCTTACCCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCGAGGTCCCAGTCCTCTaGAGCAGTCCCTCCAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KSACQFSTLQQSIENCFPEVPVL*SSPSRV Trigger: TACCCTGGAGGGACTGCTGCAGAGGACTGGGACCTC...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGGGTAAGGTCCTAGGCCTCACCCTGGAGCCAGTCACTGCAAGCTACTGTAACATTTCAACAAATTaGATCTGTAGTCTCCTATGG | + |
|
Preference number: 2 (lower is better) Translates to: LQGKVLGLTLEPVTASYCNISTN*ICSLLW Trigger: CCATAGGAGACTACAGATCCAATTTGTTGAAATGTT...ACAGTAGCTTGCAGTGACTGGCTCCAGGGTGAGGCCTAGGACCTTACCCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGTAGAAGTGAGGGCTaGGGATTGGCTCAGTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGSLAANLCLEDSCDLSSSRSEG*GLAQWQ Trigger: TTGCCACTGAGCCAATCCCCAGCCCTCACTTCTACT...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGGAATATACCTTACTCTaGAACTGTCTGTGGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FSLQNCLVRPEAQAQLLMEYTLL*NCLWES Trigger: TGACTCCCACAGACAGTTCCAGAGTAAGGTATATTC...CATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR CAA 90 bp | GATAGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTTTTGGCAAATCTGGGCTCTAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DSRETMVRISSVQWN*EDRRIVLANLGSKG Trigger: CCCTTTAGAGCCCAGATTTGCCAAAACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTGAAAAGAAGGCCACCACACTaGAAAGTTGGCTTCCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RLFCPGWSLQVGEFANLKRRPPH*KVGFLV Trigger: AACTAGGAAGCCAACTTTTCAGTGTGGTGGCCTTCT...TTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 90 bp | TCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTaGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SARVSLRSFSNSFKL*ESGSLAANLCLEDS Trigger: GCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGTCCGATAGATATTGAGCAGGGTGATGTGATCCCCCTCACTGGATATGAAACATCACAATCACTTTaGGAGGCAGTTTCCCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EGPIDIEQGDVIPLTGYETSQSL*EAVSLA Trigger: AGCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGT...TTCATATCCAGTGAGGGGGATCACATCACCCTGCTCAATATCTATCGGACCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR GCA 90 bp | GAGCGAGTTTCAGGACAGGCAGGGCTACACAGAGAAACCCTGTCTCAAGTGGTTGCACACATTTGTAGGTaGTCAGTTAAAGAGAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: ERVSGQAGLHRETLSQVVAHICR*SVKEKT Trigger: AGTTTTCTCTTTAACTGAGCACCTACAAATGTGTGC...AACCACTTGAGACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTGAAACTCGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCCTGGAAAGAGCTTGCTaGACTCAAAGAAACTGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SGSLAANLCLEDSCDLSSLERAC*TQRNCP Trigger: TGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAG...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAACAACAGACACAGCTGTaGACCAATGAGATCCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AHVQIRLSVFYTTAVYREQQTQL*TNEILA Trigger: TGCCAGGATCTCATTGGTTCACAGCTGTGTCTGTTG...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTACACAGAGAAACCCTGTCTCAAGTGGTTTACCCCTTAAGAAATGAACAATGGGGATTGGCTCAGTaGCAAAGTGTTTTGCATAGC | + |
|
Preference number: 2 (lower is better) Translates to: GLHRETLSQVVYPLRNEQWGLAQ*QSVLHS Trigger: GCTATGCAAAACACTTTGCCACTGAGCCAATCCCCA...TTGTTCATTTCTTAAGGGGTAAACCACTTGAGACAGGGTTTCTCTGTGTAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 90 bp | CTCAGCTGTGCTCTGACTTCAGCTACTAGCAGCATATTCTTGCTGTaGACAAAATTCTCTTTGCACCAGTCCTTATTCCCACCGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSCALTSATSSIFLL*TKFSLHQSLFPPMF Trigger: AAACATCGGTGGGAATAAGGACTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGCTGCTAGTAGCTGAAGTCAGAGCACAGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
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| 3UTR CAA 90 bp | ATTTCTCTCAGCTGTGCTCTGACTTCAGCTACTAGCAGCATATTCTaGCTGTTGACAAAATTCTCTTTGCACCAGTCCTTATTCCCACCG | + |
|
Preference number: 2 (lower is better) Translates to: ISLSCALTSATSSIF*LLTKFSLHQSLFPP Trigger: CGGTGGGAATAAGGACTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGCTGCTAGTAGCTGAAGTCAGAGCACAGCTGAGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
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| 3UTR CAA 90 bp | CAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATaGTTTCCCCACCGGTATAGTCTAGTTTATGTGCTCAAGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: QIRLSVFYTTAVYRE*FPHRYSLVYVLKEW Trigger: CCATTCCTTGAGCACATAAACTAGACTATACCGGTGGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCAGTGGCAAAGTGTTTTaGATAGCATGCATGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSACQFSTLQQSIENCFPSGKVF*IACMRL Trigger: GAGCCTCATGCATGCTATGCAAAACACTTTGCCACT...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATATACTAGAACTGTTCTTTTATGTTTGAGACCAGAGAGAACAGAGCACATGAGTAGAAGTGAGGGCTaGGGATTGGCTCAGTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LYTRTVLLCLRPERTEHMSRSEG*GLAQWQ Trigger: TTGCCACTGAGCCAATCCCCAGCCCTCACTTCTACT...CATGTGCTCTGTTCTCTCTGGTCTCAAACATAAAAGAACAGTTCTAGTATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCGAGAGTTTGCCAACTTaGAAAGTAGCTCAGGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: KSACQFSTLQQSIENCFPESLPT*KVAQVV Trigger: TACAACCTGAGCTACTTTTCAAGTTGGCAAACTCTC...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 90 bp | AACTGCCCACTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTaGTTGCTTATAAATACAATTCACTGTATAAATGAGAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NCPLSSKCLEGSLAH*LLINTIHCINEKIP Trigger: TGGGATTTTCTCATTTATACAGTGAATTGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 90 bp | ACTCAAAGAAACTGCCCACTGTCTTCGAAGTGCCTTGAAGGCAGTTaGGCCCATTTGTTGCTTATAAATACAATTCACTGTATAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: TQRNCPLSSKCLEGS*AHLLLINTIHCINE Trigger: CTCATTTATACAGTGAATTGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 90 bp | AAAAGCAAATTTCGAGCATTATATACTAGAACTGTTCTTTTATGTTaGAGACCAGAGAGAACAGAGCACATGTCCAAATCCGCTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KSKFRALYTRTVLLC*RPERTEHMSKSACQ Trigger: CTGACAAGCGGATTTGGACATGTGCTCTGTTCTCTCTGGTCTCAAACATAAAAGAACAGTTCTAGTATATAATGCTCGAAATTTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCTCTATACAGAAACATTaGGTCCTTAGAAACTGTATC | + |
|
Preference number: 2 (lower is better) Translates to: KSACQFSTLQQSIENCFPSIQKH*VLRNCI Trigger: GATACAGTTTCTAAGGACCCAATGTTTCTGTATAGA...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR TCA 72 bp | ATAGGGCAGGGAGGCGTACAGAGGAAGGACGAGCATTaGAGGGCAGCCATCTGGGAGGTGCCTTGCGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: IGQGGVQRKDEH*RAAIWEVPCDV Trigger: GACATCGCAAGGCACCTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTCTGTACGCCTCCCTGCCCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | GAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCTaGAGTAGTCAGGGGCAGCCTCGTAGAGCCACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: ERFSFWPFSASS*SSQGQPRRATR Trigger: CCGAGTGGCTCTACGAGGCTGCCCCTGACTACTTCAGGAGGAAGCTGAGAACGGCCAGAAACTGAACCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
||
| 3UTR CCA 72 bp | GAAAGCACTGTTGGGGACATGCAGCCACAGAGGCACTaGGGACCAACCAAGGAACTACTTGCTGGCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESTVGDMQPQRH*GPTKELLAGLC Trigger: GCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR GCA 72 bp | AAGGGCAGCCATCTGGGAGGTGCCTTGCGATGTCTCTaGAGGTCTTGCTCATTGCTTCGATCTCCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGSHLGGALRCL*RSCSLLRSPPD Trigger: GTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACATCGCAAGGCACCTCCCAGATGGCTGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR GCA 72 bp | GAGGTGCCTTGCGATGTCTCTGCAGGTCTTGCTCATTaGTTCGATCTCCTCCTGACCAGTGAGGAACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: EVPCDVSAGLAH*FDLLLTSEEHQ Trigger: CTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACATCGCAAGGCACCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CCA 72 bp | TGCCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTGCTaGACTCAAAGAAACTGCCCACTGTCTTCGAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CPARLGSLERAC*TQRNCPLSSKC Trigger: GCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | TGGGTCCTTAGAAACTGTATCCATCACTCCCTTTTCTaGGAGGTCCCAGTCCTCTGCAGCAGTCCCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WVLRNCIHHSLF*EVPVLCSSPSR Trigger: CCTGGAGGGACTGCTGCAGAGGACTGGGACCTCCCAGAAAAGGGAGTGATGGATACAGTTTCTAAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGGACACTCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACACTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPDTLHLISPGRRVVKDTSVQWN*EDRRIV Trigger: GACTATCCTCCTGTCCTCCAAATTCCACTGTACCGA...AGTGTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGAGTGTCCGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| 3UTR TCA 72 bp | GTTGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTaGAAGCACTGTTGGGGACATGCAGCCACAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGFLVPGNLLVS*KHCWGHAATEA Trigger: TGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR GCA 72 bp | AAGTGCCCAGCCAGGCTAGGCTCTCTGGAAAGAGCTTaGTGGACTCAAAGAAACTGCCCACTGTCTTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KCPARLGSLERA*WTQRNCPLSSK Trigger: CTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | ACCACGGGGCTTCAGAAGGCCACCACACTGAAAAGTTaGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTGLQKATTLKS*LPSSRKPAGFL Trigger: CAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAGTGTGGTGGCCTTCTGAAGCCCCGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | AGACTCAACAGACACAGCTGTGAACCAATGAGATCCTaGCAATGGAAGTGCCCAGCCAGGCTAGGCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLNRHSCEPMRS*QWKCPARLGSL Trigger: CAGAGAGCCTAGCCTGGCTGGGCACTTCCATTGCCAGGATCTCATTGGTTCACAGCTGTGTCTGTTGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR TCA 72 bp | GAGGTCACGCATGTAGCATTTGTTGGTGTAGAGCAGTaGAGTGTAGACCACGCAGGCAGGCTTGCAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EVTHVAFVGVEQ*SVDHAGRLAVE Trigger: TTCCACTGCAAGCCTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACATGCGTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
||
| 3UTR GCA 72 bp | CTTGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTaGTACACCCTGAGCCATAAGGGTCAACAGGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGLCLETDKTM*YTLSHKGQQVR Trigger: TCTGACCTGTTGACCCTTATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | ATCCTGCTGAGGCTGTTTGGTATAGAAGATCTGGATTaGATGCTGCCGACCCTCAAGGTAAAGGACAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLRLFGIEDLD*MLPTLKVKDRG Trigger: GCCCCTGTCCTTTACCTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CCA 72 bp | CAAGGGCTGCATGCAGGTAATCCTGCTGAGGCTGTTTaGTATAGAAGATCTGGATTGGATGCTGCCGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QGLHAGNPAEAV*YRRSGLDAADP Trigger: AGGGTCGGCAGCATCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGATTACCTGCATGCAGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CCA 72 bp | CATCCACCACACAGAGGTCACGCATGTAGCATTTGTTaGTGTAGAGCAGTGAAGTGTAGACCACGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HPPHRGHACSIC*CRAVKCRPRRQ Trigger: CTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACATGCGTGACCTCTGTGTGGTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
||
| 3UTR CCA 72 bp | AAGACTAGGTGTAGGAGAAAGGACAAACTGATCCTCTaGCTTCCGAGCCGTCAGGTACCTCCTTCCTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KTRCRRKDKLIL*LPSRQVPPSSS Trigger: GGAAGAGGAAGGAGGTACCTGACGGCTCGGAAGCCAGAGGATCAGTTTGTCCTTTCTCCTACACCTAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | AACAGACACAGCTGTGAACCAATGAGATCCTGGCAATaGAAGTGCCCAGCCAGGCTAGGCTCTCTGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRHSCEPMRSWQ*KCPARLGSLER Trigger: TCTTTCCAGAGAGCCTAGCCTGGCTGGGCACTTCCATTGCCAGGATCTCATTGGTTCACAGCTGTGTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCCGTGGTGGCATAGGTGCCATCTGTCTGGAGTTCAGCAGTATTCATAAACATCTGGGAGGTGCCTaGCGATGTCTCTGCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CVRGGIGAICLEFSSIHKHLGGA*RCLCRS Trigger: AGACCTGCAGAGACATCGCAAGGCACCTCCCAGATG...TTTATGAATACTGCTGAACTCCAGACAGATGGCACCTATGCCACCACGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGATTGGCTCAGTGGCAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGACTTGCTGGCCTCTGCTaGGAGACAGACAAGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: WGLAQWQSVLHSMHEALGLAGLC*ETDKTM Trigger: CATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAG...TCCCAGAGCCTCATGCATGCTATGCAAAACACTTTGCCACTGAGCCAATCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTCCGGACACTCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACGACAGGAGGATAGTTTaGGCAAATCTGGGCTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLPDTLHLISPGRRVVKDDRRIV*ANLGSK Trigger: TTTAGAGCCCAGATTTGCCAAAACTATCCTCCTGTC...GTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGAGTGTCCGGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | AGGTCTTGCTCATTGCTTCGATCTCCTCCTGACCAGTaGGGAACACCAGGATGTCTTGAGAAGCAGGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSCSLLRSPPDQ*GTPGCLEKQEL Trigger: AAGCTCCTGCTTCTCAAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGCAATGAGCAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | AAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTaGTCTAAGCTCCAGGCCCAGCCATGCTGGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KSGCKLMFGRQL*SKLQAQPCWQH Trigger: ATGCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| 3UTR TCA 72 bp | AGAAAACTACCACGGGGCTTCAGAAGGCCACCACACTaGAAAGTTGGCTTCCTAGTTCCAGGAAACCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKLPRGFRRPPH*KVGFLVPGNLL Trigger: CAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAGTGTGGTGGCCTTCTGAAGCCCCGTGGTAGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR GCA 72 bp | GGCTCTCTGGAAAGAGCTTGCTGGACTCAAAGAAACTaGCCACTGTCTTCGAAGTGCCTTGAAGGCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSLERACWTQRN*PLSSKCLEGSL Trigger: CAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCAAGCTCTTTCCAGAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | TATGTTCAAGAGCACCTAACAGGTCCAGCTGGGCAATaGCCGCCTCAATGTGATCTGGAGAAGGTTTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: YVQEHLTGPAGQ*PPQCDLEKVWT Trigger: TGTCCAAACCTTCTCCAGATCACATTGAGGCGGCCATTGCCCAGCTGGACCTGTTAGGTGCTCTTGAACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTGGGTCTTTGATACTCTCTGTACAGCTAGTACCTCAAGACCACTGTCAGCCATCTGTCAGGAACTaGATCCTGGTGTCTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPGSLILSVQLVPQDHCQPSVRN*ILVSSE Trigger: CTCAGAAGACACCAGGATCAAGTTCCTGACAGATGG...CTGACAGTGGTCTTGAGGTACTAGCTGTACAGAGAGTATCAAAGACCCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | TACCTCCTTCCTCTTCCCCATGTAGCAGCTCTGACTTaGACTCTCTTCCCTCACAGGCACACATTTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YLLPLPHVAALT*TLFPHRHTFVG Trigger: ACCTACAAATGTGTGCCTGTGAGGGAAGAGAGTTCAAGTCAGAGCTGCTACATGGGGAAGAGGAAGGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR GCA 72 bp | ATAGCATCAAAAATACAAAGACTGGCCAGGTGGTGGTaGACACCTTCAATCCCAGCACTTGGGAGGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IASKIQRLARWW*TPSIPALGRER Trigger: CCTTTCCCTCCCAAGTGCTGGGATTGAAGGTGTGCACCACCACCTGGCCAGTCTTTGTATTTTTGATGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCACCGTCATCTTCTCGAACTTCTCAAACTCGTCCTCAGTGTAGAGTCGGTAGACATCACAATCACTTaGAGAGGCAGTTTCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WHRHLLELLKLVLSVESVDITIT*RGSFPS Trigger: GCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGTC...TACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGATGACGGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | CAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTaGAAAGTAGCTCAGGTTGTACTGCAGCAAAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: QAGVFRLESLPT*KVAQVVLQQNH Trigger: GTGGTTTTGCTGCAGTACAACCTGAGCTACTTTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | GCTGCCATCTTTCTTCCAATTGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGAGCACCTAACAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AAIFLPIGVRVS*SSLCSRAPNRS Trigger: GGACCTGTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATTGGAAGAAAGATGGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CCA 72 bp | AGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGGATAGTCTCTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: SRETMVRISSVQ*NLEDRRIVSGS Trigger: AGATCCAGAGACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTGAAACAGTGGCAAAGTGTTTaGCATAGCATGCATGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLFCPGWSLQVGEFANLKQWQSV*HSMHEA Trigger: AGCCTCATGCATGCTATGCAAAACACTTTGCCACTG...TTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR TCA 72 bp | CAAAATGACACAGCTGTACTTCCGAAGCAAGGAGTCTaGAATTGCTTCACGCAGAAGCATGCCATCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QNDTAVLPKQGV*NCFTQKHAICQ Trigger: CTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTCCTTGCTTCGGAAGTACAGCTGTGTCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | AAGGTGAGCACATTTGGGACTTTCATTGCTAGGAGCTaGAGTATTACACTGGCCAGGTTACACCTCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: KVSTFGTFIARS*SITLARLHLWI Trigger: GATCCAGAGGTGTAACCTGGCCAGTGTAATACTTCAGCTCCTAGCAATGAAAGTCCCAAATGTGCTCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR TCA 72 bp | AACGGCGGACACTCTCCATGTCCCCTCGAGATGACATaGTTGGCATTGACATCTTTAAGCAGATTTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NGGHSPCPLEMT*LALTSLSRFLS Trigger: TGAGAGAAATCTGCTTAAAGATGTCAATGCCAATCATGTCATCTCGAGGGGACATGGAGAGTGTCCGCCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049048.13 ENSMUST00000146203.8 |
||
| 3UTR GCA 72 bp | TGCTGGACTCAAAGAAACTGCCCACTGTCTTCGAAGTaGCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: CWTQRNCPLSSK*LEGSLAHLLLI Trigger: TATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTTTCTTTGAGTCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | TTAATAGCATCAAAAATACAAAGACTGGCCAGGTGGTaGTGCACACCTTCAATCCCAGCACTTGGGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LIASKIQRLARW*CTPSIPALGRE Trigger: TTCCCTCCCAAGTGCTGGGATTGAAGGTGTGCACCACCACCTGGCCAGTCTTTGTATTTTTGATGCTATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | AGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGGATAGTTTTGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRETMVRISSVQ*NLEDRRIVLAN Trigger: ATTTGCCAAAACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CCA 72 bp | AAATTAATAGCATCAAAAATACAAAGACTGGCCAGGTaGTGGTGCACACCTTCAATCCCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLIASKIQRLAR*WCTPSIPALGR Trigger: CCTCCCAAGTGCTGGGATTGAAGGTGTGCACCACCACCTGGCCAGTCTTTGTATTTTTGATGCTATTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR TCA 72 bp | GCTAATTGTCCCCAGGTTTCCGCAAAGGCAGACCACTaGAAATTAATAGCATCAAAAATACAAAGACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ANCPQVSAKADH*KLIASKIQRLA Trigger: GGCCAGTCTTTGTATTTTTGATGCTATTAATTTTCAGTGGTCTGCCTTTGCGGAAACCTGGGGACAATTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACAGTAGTACAGATGTGTTaGGACCGATTAAGCACAATA | + |
|
Preference number: 3 (lower is better) Translates to: LSSKCLEGSLAHLLLINTVVQMC*DRLSTI Trigger: TATTGTGCTTAATCGGTCCAAACACATCTGTACTAC...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CCA 72 bp | ACAAGGATTTGTGCCACAGTAAATACTTTGCTGTTTTaGAATCCTGTTATAAGAGATGCAAATGTTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: TRICATVNTLLF*NPVIRDANVLT Trigger: TGTGAGAACATTTGCATCTCTTATAACAGGATTCCAAAACAGCAAAGTATTTACTGTGGCACAAATCCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACTGTTGGGGACATGCAGCCACAGAGGCACTGGGGACCAACCAAGGAACGCCAGCGGCGGCGTCTaGCTCCGGCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KALLGTCSHRGTGDQPRNASGGV*LRPPPA Trigger: AGCTGGAGGAGGCCGGAGGCAGACGCCGCCGCTGGC...GTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCTGCATGTCCCCAACAGTGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGGGCAGACTCCGGCGCTaGAGCTCCAGGGCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQNCLVRPEAQAQLLMGRLRR*SSRASR Trigger: CCGCGAGGCCCTGGAGCTGCAGCGCCGGAGTCTGCC...CATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGGCCCAGCCCTGCCTGTaGGCTGCCAGGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKVFCIACMRLWDPREREAQPCL*AARPGS Trigger: AGACCCAGGCCTGGCAGCGCACAGGCAGGGCTGGGC...CTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCACCTCATCTCTCCGGGCAGGAGGGTTGTAAAGGACACTGTCCACAGATAGGACTGGCCGAAGGCTaGGCCAGCGGCGGCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPHLSGQEGCKGHCPQIGLAEG*ASGGVC Trigger: GCAGACGCCGCCGCTGGCCCAGCCTTCGGCCAGTCC...TATCTGTGGACAGTGTCCTTTACAACCCTCCTGCCCGGAGAGATGAGGTGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR GCA 90 bp | TGTAGCATTTGTTGGTGTAGAGCAGTGAAGTGTAGACCACGCAGGCAGGCTTGCGCCAGCGGCGGCGTCTaGCTCCGGCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSICWCRAVKCRPRRQACASGGV*LRPPPA Trigger: AGCTGGAGGAGGCCGGAGGCAGACGCCGCCGCTGGC...GCAAGCCTGCCTGCGTGGTCTACACTTCACTGCTCTACACCAACAAATGCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR GCA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCCAGCGGCGGCGTCTaGCTCCGGCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQSPKLPGETRGTSSASHASGGV*LRPPPA Trigger: AGCTGGAGGAGGCCGGAGGCAGACGCCGCCGCTGGC...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGGCAGACTCCGGCGCTaGAGCTCCAGGGCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSPKLPGETRGTSSASHGRLRR*SSRASR Trigger: CCGCGAGGCCCTGGAGCTGCAGCGCCGGAGTCTGCC...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCGCCCAGCCCTGCCTGTaGGCTGCCAGGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCAQPCL*AARPGS Trigger: AGACCCAGGCCTGGCAGCGCACAGGCAGGGCTGGGC...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTAGGACTGGCCGAAGGCTaGGCCAGCGGCGGCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVLHSMHEALGSTGEGVGLAEG*ASGGVC Trigger: GCAGACGCCGCCGCTGGCCCAGCCTTCGGCCAGTCC...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | AGTATTCATAAAGAGGCTGTGAGCCATGCAACGGCGGACACTCTCCATGTCCCCCCCGCGCCCGGAAGATaGGCAGACTCCGGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIHKEAVSHATADTLHVPPAPGR*ADSGAA Trigger: TGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGG...GGGGACATGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCTTTATGAATACT 61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | CATAAAGAGGCTGTGAGCCATGCAACGGCGGACACTCTCCATGTCCCCTCGAGATCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HKEAVSHATADTLHVPSRSRFRS*ANSCPR Trigger: GCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGA...TCTCGAGGGGACATGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCTTTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCCTGAGCCATTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGLCLETDKTMCYTLSHSRFRS*ANSCPR Trigger: GCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGA...ATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGCCCTTTGGGGCCCCTTaGAAGACTCGAAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLPGETRGTSSASHALRRPFGAP*KTRSCC Trigger: GCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGGG...CCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTTGGATGGCCACTGGCTaGTGTGTGTCCGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHAWMATG*CVSVVA Trigger: TGCCACCACGGACACACATCAGCCAGTGGCCATCCA...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTAGCAGGAGCTTCCGATaGGGACCGCGTTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHASRSFR*GPRCPG Trigger: ACCTGGACAACGCGGTCCTCATCGGAAGCTCCTGCT...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTGCCCAGCCCTGCCTGTaGGCTGCCAGGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSAQPCL*AARPGS Trigger: AGACCCAGGCCTGGCAGCGCACAGGCAGGGCTGGGC...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTCCCGCGCCCGGAAGATaGGCAGACTCCGGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSPAPGR*ADSGAA Trigger: TGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGG...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| 3UTR CAA 72 bp | AATAGGGCAGGGAGGCGTACAGAGGAAGGACGAGCATaGAAGGGCAGCCATCTGGGAGGTGCCTTGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NRAGRRTEEGRA*KGSHLGGALRC Trigger: ACATCGCAAGGCACCTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTCTGTACGCCTCCCTGCCCTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | TGCGCTGCCAGGCCTGGGTCTTTGATACTCTCTGTACAGCTAGTACCTCAAGACCCCTTTGGGGCCCCTTaGAAGACTCGAAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CAARPGSLILSVQLVPQDPFGAP*KTRSCC Trigger: GCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGGG...GTCTTGAGGTACTAGCTGTACAGAGAGTATCAAAGACCCAGGCCTGGCAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTAGTCTCCTATGGCTCCTCCCCCAGTCATGAGAGCTCAAGGGGCTGTGCTGTTGGTGTAGAGCAGTaGAGTGTAGACCACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVSYGSSPSHESSRGCAVGVEQ*SVDHAG Trigger: GCCTGCGTGGTCTACACTTCACTGCTCTACACCAAC...AGCACAGCCCCTTGAGCTCTCATGACTGGGGGAGGAGCCATAGGAGACTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGTAAGGTCCTAGGCCTCACCCTGGAGCCAGTCACTGCAAGCTACTGTATCTGGGAGGTGCCTTaGGATGTCTCTGCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQGKVLGLTLEPVTASYCIWEVP*DVSAGL Trigger: AAGACCTGCAGAGACATCGCAAGGCACCTCCCAGAT...ACAGTAGCTTGCAGTGACTGGCTCCAGGGTGAGGCCTAGGACCTTACCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCATCCTGGAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCTGAAGAGAGTCGGTAGCAGATaGCACTGTCCTCTCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQHPGTVQFLAVLSFLLKRVGSR*HCPLAQ Trigger: CTGGGCGAGAGGACAGTGGCATCTGCTACCGACTCT...CTTCAGGAGGAAGCTGAGAACGGCCAGAAACTGAACCGTTCCAGGATGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTAGTCTCCTATGGCTCCTCCCCCAGTCATGAGAGCTCAAGGGGCTGTGCTCCGTGGTGGCATAGGTaGCATCTGTCTGGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVVSYGSSPSHESSRGCAPWWHR*HLSGVQ Trigger: CTGAACTCCAGACAGATGGCACCTATGCCACCACGG...AGCACAGCCCCTTGAGCTCTCATGACTGGGGGAGGAGCCATAGGAGACTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAGGACTGGCCGAAGGCTaGGCCAGCGGCGGCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLGLAEG*ASGGVC Trigger: GCAGACGCCGCCGCTGGCCCAGCCTTCGGCCAGTCC...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCCCTCGCGGTAGGGACTaGCCGAAGGCTGGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLAANLCLEDSCDLSSPRGRD*PKAGPA Trigger: CGCTGGCCCAGCCTTCGGCCAGTCCCTACCGCGAGG...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCAGGAAGGACGAGCATTaGAGGGCAGCCATCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCRKDEH*RAAIWE Trigger: CTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCT...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | TTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGGCCCAGCCATGCTGGCAGCAGGAAGGACGAGCATTaGAGGGCAGCCATCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLEDSCDLSSRPSHAGSRKDEH*RAAIWE Trigger: CTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCT...GCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | TTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGGCCCAGCCATGCTGGCAGCAGAGTCGGTAGCAGATaGCACTGTCCTCTCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLEDSCDLSSRPSHAGSRVGSR*HCPLAQ Trigger: CTGGGCGAGAGGACAGTGGCATCTGCTACCGACTCT...GCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTACACAGAGAAACCCTGTCTCAAGTGGTTTACCCCTTAAGAAATGAACAACCCGCGCCCGGAAGATaGGCAGACTCCGGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHRETLSQVVYPLRNEQPAPGR*ADSGAA Trigger: TGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGG...TTGTTCATTTCTTAAGGGGTAAACCACTTGAGACAGGGTTTCTCTGTGTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTATGGTGGCAAGAGAGATaGCAGCCACTCGACGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVLHSMHEALGSTGEGVWWQER*QPLDGA Trigger: AGCCCCGTCGAGTGGCTGCCATCTCTCTTGCCACCA...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTAGTCTCCTATGGCTCCTCCCCCAGTCATGAGAGCTCAAGGGGCTGTGCTCATCTGAGACTCTGGTaGCAAGAGAGATGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVSYGSSPSHESSRGCAHLRLW*QERWQP Trigger: TGGCTGCCATCTCTCTTGCCACCAGAGTCTCAGATG...AGCACAGCCCCTTGAGCTCTCATGACTGGGGGAGGAGCCATAGGAGACTACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | AGTGAGGGCTGGGGATTGGCTCAGTGGCAAAGTGTTTaGCATAGCATGCATGAGGCTCTGGGATCCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEGWGLAQWQSV*HSMHEALGSTG Trigger: TCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTGCCACTGAGCCAATCCCCAGCCCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCACTCGGCATCCACCACACAGAGGTCACGCATGTAGCATTTGTTGGTGTATGTATAGCCAACCGATaGGGACCGCGTTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPLGIHHTEVTHVAFVGVCIANR*GPRCPG Trigger: ACCTGGACAACGCGGTCCTCATCGGTTGGCTATACA...TACACCAACAAATGCTACATGCGTGACCTCTGTGTGGTGGATGCCGAGTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGTCTTTGGGGCCCCTTaGAAGACTCGAAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQSPKLPGETRGTSSASHVFGAP*KTRSCC Trigger: GCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGAC...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCCCGTGGTGGCATAGGTaGCATCTGTCTGGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCPWWHR*HLSGVQ Trigger: CTGAACTCCAGACAGATGGCACCTATGCCACCACGG...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACACCTCGCGGTAGGGACTaGCCGAAGGCTGGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSKCLEGSLAHLLLINTPRGRD*PKAGPA Trigger: CGCTGGCCCAGCCTTCGGCCAGTCCCTACCGCGAGG...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGGCAGGAGCTTCCTGGTaGATCTGGAAGACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLPGETRGTSSASHALRRAGASW*IWKTET Trigger: TGTCTCAGTCTTCCAGATCCACCAGGAAGCTCCTGC...CCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | TTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGGCCCAGCCATGCTGGCAGCGCCAGGTTACACCTCTaGATCTCTGGCACCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LCLEDSCDLSSRPSHAGSARLHL*ISGTVI Trigger: GATGACGGTGCCAGAGATCCAGAGGTGTAACCTGGC...GCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGGCCAGGTTACACCTCTaGATCTCTGGCACCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSLQNCLVRPEAQAQLLMARLHL*ISGTVI Trigger: GATGACGGTGCCAGAGATCCAGAGGTGTAACCTGGC...CATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGCAGATGATGGGTGGATaGCCACTGGCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLPGETRGTSSASHALRRQMMGG*PLADVC Trigger: ACACACATCAGCCAGTGGCCATCCACCCATCATCTG...CCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| 3UTR CAA 72 bp | GATCTCCTCCTGACCAGTGAGGAACACCAGGATGTCTaGAGAAGCAGGAGCTTCCTGGTGGATCTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLLLTSEEHQDV*RSRSFLVDLED Trigger: GTCTTCCAGATCCACCAGGAAGCTCCTGCTTCTCAAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CAA 72 bp | AGCCACAGAGGCACTGGGGACCAACCAAGGAACTACTaGCTGGCCTCTGCTTGGAGACAGACAAGACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SHRGTGDQPRNY*LASAWRQTRQC Trigger: ACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAGTAGTTCCTTGGTTGGTCCCCAGTGCCTCTGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | CAGCACGCAGGGCTGTTGTGGAAGTTCATCTGTCTGTaGGAGGCTATTCTGTCCAGGCTGGAGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHAGLLWKFICL*EAILSRLESSG Trigger: ACCTGAAGACTCCAGCCTGGACAGAATAGCCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GAGCGAGTTTCAGGACAGGCAGGGCTACACAGAGAAACCCTGTCTCAAGTGGTTGATCCTGGTGTCTTCTaGGGTGACATCCTCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERVSGQAGLHRETLSQVVDPGVF*GDILKA Trigger: CGCTTTGAGGATGTCACCTCAGAAGACACCAGGATC...AACCACTTGAGACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTGAAACTCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCCGAAGCAAGGAGTCTaGAATTGCTTCACGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHAPKQGV*NCFTQK Trigger: CTTCTGCGTGAAGCAATTTCAGACTCCTTGCTTCGG...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTAGTGGATCTGGAAGACTaGGACAAGGGCTGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVLHSMHEALGSTGEGVVDLED*DKGCMQ Trigger: CTGCATGCAGCCCTTGTCTCAGTCTTCCAGATCCAC...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | TTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGGCCCAGCCATGCTGGCAGCTCTCCTCCTGACCAGTaGGGAACACCAGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLEDSCDLSSRPSHAGSSPPDQ*GTPGCL Trigger: AAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGA...GCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | GAGGATAGTCTCTGGATCTCTGGCACCGTCATCTTCTCGAACTTCTCAAACTCGAGGAAGGACGAGCATTaGAGGGCAGCCATCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDSLWISGTVIFSNFSNSRKDEH*RAAIWE Trigger: CTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCT...CGAGTTTGAGAAGTTCGAGAAGATGACGGTGCCAGAGATCCAGAGACTATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGTTGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGTGGATGGCCACTGGCTaGTGTGTGTCCGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSWLPSSRKPAGFLKALWMATG*CVSVVA Trigger: TGCCACCACGGACACACATCAGCCAGTGGCCATCCA...CAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCATCTGGGAGGTGCCTTaGGATGTCTCTGCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCIWEVP*DVSAGL Trigger: AAGACCTGCAGAGACATCGCAAGGCACCTCCCAGAT...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAAGAGTCGGTAGCAGATaGCACTGTCCTCTCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQRVGSR*HCPLAQ Trigger: CTGGGCGAGAGGACAGTGGCATCTGCTACCGACTCT...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTTCTCATCTGAGACTCTaGTGGCAAGAGAGATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHASHLRL*WQERWQ Trigger: CTGCCATCTCTCTTGCCACCAGAGTCTCAGATGAGA...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTACACCTCTGGATCTCTaGCACCGTCATCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHATPLDL*HRHLLE Trigger: TTCGAGAAGATGACGGTGCCAGAGATCCAGAGGTGT...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATCAGGCAGGCTTGCAGTaGAAGAGGACAGATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSPKLPGETRGTSSASHQAGLQ*KRTDDG Trigger: CCCATCATCTGTCCTCTTCCACTGCAAGCCTGCCTG...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTATCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLSRFRS*ANSCPR Trigger: GCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGA...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSASISS*PVRNTR Trigger: CCTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGC...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGTTGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGGTGGAAGAGGACAGATaGTGGGTGGATGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSWLPSSRKPAGFLKALVEEDR*WVDGHW Trigger: CCAGTGGCCATCCACCCATCATCTGTCCTCTTCCAC...CAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAGTTGGTGTAGAGCAGTaGAGTGTAGACCACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQVGVEQ*SVDHAG Trigger: GCCTGCGTGGTCTACACTTCACTGCTCTACACCAAC...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTCAGCTTCCTCCTaGAGTAGTCAGGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQFSASS*SSQGQP Trigger: AGGCTGCCCCTGACTACTTCAGGAGGAAGCTGAGAA...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTAGCAGGTCTTGCTCATTaGTTCGATCTCCTCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSVLHSMHEALGSTGEGVAGLAH*FDLLLT Trigger: GGTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGC...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTGGCTCAGTGGCAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGAGCTTCCTGGTGGATCTaGAAGACTGAGACAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGLAQWQSVLHSMHEALGASWWI*KTETRA Trigger: AGCCCTTGTCTCAGTCTTCCAGATCCACCAGGAAGC...TCCCAGAGCCTCATGCATGCTATGCAAAACACTTTGCCACTGAGCCAATCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTGAAATGGGTGGATGGCCACTaGCTGATGTGTGTCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFCPGWSLQVGEFANLKWVDGH*LMCVRG Trigger: ACCACGGACACACATCAGCCAGTGGCCATCCACCCA...TTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAACTCTCAGCTGTGCTCTaGCTTCAGCTACTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQLSAVL*LQLLAA Trigger: TGCTGCTAGTAGCTGAAGTCAGAGCACAGCTGAGAG...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCCCCTCGAGATGACATaGTTGGCATTGACATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHAPLEMT*LALTSL Trigger: TAAAGATGTCAATGCCAATCATGTCATCTCGAGGGG...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGGCCTCTGCTTGGAGACAGACAAGACAATGTGCTACACCCTGAGCCATTGTCTCTGCAGGTCTTaGTCATTGCTTCGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLCLETDKTMCYTLSHCLCRS*SLLRSP Trigger: AGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACA...ATGGCTCAGGGTGTAGCACATTGTCTTGTCTGTCTCCAAGCAGAGGCCAGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGCAGCCATCTGGGAGGTaGCTTGCGATGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSARVSLRSFSNSFKLLEQPSGR*LAMSLQ Trigger: CTGCAGAGACATCGCAAGGCACCTCCCAGATGGCTG...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGAGAGGCTGTGAGCCATaGAACGGCGGACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSARVSLRSFSNSFKLLERGCEP*NGGHSP Trigger: TGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCT...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAGTTGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGGCTGATGTGTGTCCGTaGTGGCATAGGTGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSWLPSSRKPAGFLKALADVCP*WHRCHL Trigger: CAGATGGCACCTATGCCACCACGGACACACATCAGC...CAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTGCTGATGTGTGTCCGTaGTGGCATAGGTGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSADVCP*WHRCHL Trigger: CAGATGGCACCTATGCCACCACGGACACACATCAGC...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| 3UTR CAA 72 bp | AATCCTGCTGAGGCTGTTTGGTATAGAAGATCTGGATaGGATGCTGCCGACCCTCAAGGTAAAGGACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPAEAVWYRRSG*DAADPQGKGQG Trigger: CCCCTGTCCTTTACCTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAACATCTGTCAGGAACTTaGTCCTGGTGTCTTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQHLSGT*SWCLLR Trigger: CCTCAGAAGACACCAGGATCAAGTTCCTGACAGATG...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGGATTGGCTCGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKYTQVDIKVEVRAGDWLASISS*PVRNTR Trigger: CCTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGC...GAGCCAATCCCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGGTGATGTGATCCCCCTCACTGGATATGAATTTCTTCCGGACACTCTGTTCATTGCTAGGAGCTaGAGTATTACACTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQGDVIPLTGYEFLPDTLFIARS*SITLAR Trigger: CCTGGCCAGTGTAATACTTCAGCTCCTAGCAATGAA...CAGAGTGTCCGGAAGAAATTCATATCCAGTGAGGGGGATCACATCACCCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAGTGGAAGAGGACAGATaGTGGGTGGATGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLVEEDR*WVDGHW Trigger: CCAGTGGCCATCCACCCATCATCTGTCCTCTTCCAC...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTACCTAACAGGTCCAGCTaGGCAATGGCCGCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLPNRSS*AMAASM Trigger: CATTGAGGCGGCCATTGCCCAGCTGGACCTGTTAGG...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCATAGCAGGGAGACTATaGTCAGAATCTCTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCIAGRL*SESLRY Trigger: GTACCGAAGAGATTCTGACCATAGTCTCCCTGCTAT...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTGAAAGATGTGTGTCCGTGGTaGCATAGGTGCCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFCPGWSLQVGEFANLKDVCPW*HRCHLS Trigger: AGACAGATGGCACCTATGCCACCACGGACACACATC...TTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGTGGGTGGATGGCCACTaGCTGATGTGTGTCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DHSARVSLRSFSNSFKLLWVDGH*LMCVRG Trigger: ACCACGGACACACATCAGCCAGTGGCCATCCACCCA...CAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTGCATGTAGCATTTGTTaGTGTAGAGCAGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPKLPGETRGTSSASHAACSIC*CRAVKC Trigger: ACACTTCACTGCTCTACACCAACAAATGCTACATGC...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| 3UTR CAA 72 bp | AGGTCGACATCCATGGTAGCTGACATCACAATCACTTaGAGAGGCAGTTTCCCTAGCTCCTTTCGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTSMVADITIT*RGSFPSSFRLF Trigger: GAAGAGGCGAAAGGAGCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGTCAGCTACCATGGATGTCGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| 3UTR CAA 72 bp | TACCAAGAAGATAAACCCCTGCAGCACGCAGGGCTGTaGTGGAAGTTCATCTGTCTGTTGGAGGCTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQEDKPLQHAGL*WKFICLLEAIL Trigger: CAGAATAGCCTCCAACAGACAGATGAACTTCCACAACAGCCCTGCGTGCTGCAGGGGTTTATCTTCTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | ATTAATAGCATCAAAAATACAAAGACTGGCCAGGTGGTGGTGCACACCTTCAATAGCCAGTTTCCCCGATaGGGACCGCGTTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: INSIKNTKTGQVVVHTFNSQFPR*GPRCPG Trigger: ACCTGGACAACGCGGTCCTCATCGGGGAAACTGGCT...ATTGAAGGTGTGCACCACCACCTGGCCAGTCTTTGTATTTTTGATGCTATTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTATTCTGTCCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTTGAAATGTCCTCTTCTCATCTaGGACTCTGGTGGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLFCPGWSLQVGEFANLKCPLLI*DSGGKR Trigger: TCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACA...TTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGGACAGAATAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAACAGCCATCTGGGAGGTaGCTTGCGATGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREQPSGR*LAMSLQ Trigger: CTGCAGAGACATCGCAAGGCACCTCCCAGATGGCTG...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAAAGAGGCTGTGAGCCATaGAACGGCGGACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYRERGCEP*NGGHSP Trigger: TGGAGAGTGTCCGCCGTTGCATGGCTCACAGCCTCT...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAACCTAACAGGTCCAGCTaGGCAATGGCCGCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREPNRSS*AMAASM Trigger: CATTGAGGCGGCCATTGCCCAGCTGGACCTGTTAGG...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCGATGTGTGTCCGTGGTaGCATAGGTGCCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSLAANLCLEDSCDLSSDVCPW*HRCHLS Trigger: AGACAGATGGCACCTATGCCACCACGGACACACATC...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| 3UTR CAA 72 bp | CCAGGCTGGAGTCTTCAGGTTGGAGAGTTTGCCAACTaGAAAAGTAGCTCAGGTTGTACTGCAGCAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWSLQVGEFAN*KSSSGCTAAKP Trigger: TGGTTTTGCTGCAGTACAACCTGAGCTACTTTTCAAGTTGGCAAACTCTCCAACCTGAAGACTCCAGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTTTCATTGCTAGGAGCTaGAGTATTACACTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSFIARS*SITLAR Trigger: CCTGGCCAGTGTAATACTTCAGCTCCTAGCAATGAA...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGCAGGTCTTGCTCATTaGTTCGATCTCCTCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: DHSARVSLRSFSNSFKLLAGLAH*FDLLLT Trigger: GGTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGC...CAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAGAAGCAGGAGCTTCCTaGTGGATCTGGAAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLEAGAS*WIWKTE Trigger: CTCAGTCTTCCAGATCCACCAGGAAGCTCCTGCTTC...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTGGGTCCTTAGAAACTGTATCCATCACTCCCTTTTCTGGGAGGTCCCAACACCTCTGGATCTCTaGCACCGTCATCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHWVLRNCIHHSLFWEVPTPLDL*HRHLLE Trigger: TTCGAGAAGATGACGGTGCCAGAGATCCAGAGGTGT...TGGGACCTCCCAGAAAAGGGAGTGATGGATACAGTTTCTAAGGACCCAATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAGCAGGGTGATGTGATCCCCCTCACTGGATATGAATTTCTTCCGGACACTGCTGAAGTATTACACTaGCCAGGTTACACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEQGDVIPLTGYEFLPDTAEVLH*PGYTSG Trigger: TCCAGAGGTGTAACCTGGCCAGTGTAATACTTCAGC...AGTGTCCGGAAGAAATTCATATCCAGTGAGGGGGATCACATCACCCTGCTCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLYVGSFCTGESEKLQQGVRVS*SSLCSR Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSISSVQ*NLEDRR Trigger: CCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGAT...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | ACCGATGTTTTTGAAGGTCCGATAGATATTGAGCAGGGTGATGTGATCCCCCTCATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDVFEGPIDIEQGDVIPLISSVQ*NLEDRR Trigger: CCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGAT...GAGGGGGATCACATCACCCTGCTCAATATCTATCGGACCTTCAAAAACATCGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTACACAGAGAAACCCTGTCTCAAGTGGTTTACCCCTTAAGAAATGAACAACAGATGATGGGTGGATaGCCACTGGCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHRETLSQVVYPLRNEQQMMGG*PLADVC Trigger: ACACACATCAGCCAGTGGCCATCCACCCATCATCTG...TTGTTCATTTCTTAAGGGGTAAACCACTTGAGACAGGGTTTCTCTGTGTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAACAGGCAGGCTTGCAGTaGAAGAGGACAGATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREQAGLQ*KRTDDG Trigger: CCCATCATCTGTCCTCTTCCACTGCAAGCCTGCCTG...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTAGCATGTAGCATTTGTTaGTGTAGAGCAGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSVLHSMHEALGSTGEGVACSIC*CRAVKC Trigger: ACACTTCACTGCTCTACACCAACAAATGCTACATGC...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACATCTCCTCCTGACCAGTaGGGAACACCAGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSKCLEGSLAHLLLINTSPPDQ*GTPGCL Trigger: AAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGA...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGAACACCAGGATGTCTTaGGAAGCAGGAGCTTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DHSARVSLRSFSNSFKLLNTRMS*EAGASD Trigger: ATCGGAAGCTCCTGCTTCTCAAGACATCCTGGTGTT...CAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGGATTGGCTCACACCTCTGGATCTCTaGCACCGTCATCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKYTQVDIKVEVRAGDWLTPLDL*HRHLLE Trigger: TTCGAGAAGATGACGGTGCCAGAGATCCAGAGGTGT...GAGCCAATCCCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGGCTGAAGTATTACACTaGCCAGGTTACACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSARVSLRSFSNSFKLLEAEVLH*PGYTSG Trigger: TCCAGAGGTGTAACCTGGCCAGTGTAATACTTCAGC...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCGCTGAAGTATTACACTaGCCAGGTTACACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSLAANLCLEDSCDLSSAEVLH*PGYTSG Trigger: TCCAGAGGTGTAACCTGGCCAGTGTAATACTTCAGC...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR CCA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSGVRVS*SSLCSR Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTCCGATAGATATTGAGCAGGGTGATGTGATCCCCCTCACTGGATATGAAATAGCAGGGAGACTATaGTCAGAATCTCTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EGPIDIEQGDVIPLTGYEIAGRL*SESLRY Trigger: GTACCGAAGAGATTCTGACCATAGTCTCCCTGCTAT...TTCATATCCAGTGAGGGGGATCACATCACCCTGCTCAATATCTATCGGACCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| 3UTR CAA 72 bp | GAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTTTTGGCAAATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETMVRISSVQWN*EDRRIVLANLG Trigger: GCCCAGATTTGCCAAAACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
||
| CDS-3UTR TCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAAAGGTACTGTGGGATCTaGGTTGTTTTCCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYRERYCGI*VVFPEP Trigger: TGGCTCTGGGAAAACAACTCAGATCCCACAGTACCT...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATACATCACAATCACTTTaGGAGGCAGTTTCCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLESGSLAANLCLEDSCDTSQSL*EAVSLA Trigger: AGCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGT...ATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAGGACAGGGGCTCTATTaGAGTACTGAGAAAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLGQGLY*STEKTG Trigger: ACCTGTTTTCTCAGTACTTCAATAGAGCCCCTGTCC...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTTGGAGGACAGGAGGATACGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETMVRISSVQWNLEDRRIRCWLK*SLCDSP Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...TATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGTGTCTCTGCAGGTCTTaGTCATTGCTTCGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DHSARVSLRSFSNSFKLLCLCRS*SLLRSP Trigger: AGGAGATCGAAGCAATGAGCAAGACCTGCAGAGACA...CAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAATAGAAGATCTGGATTaGATGCTGCCGACCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LESGSLAANLCLEDSCDLIEDLD*MLPTLK Trigger: CTTGAGGGTCGGCAGCATCCAATCCAGATCTTCTAT...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGATAGCAGGGAGACTATaGTCAGAATCTCTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSARVSLRSFSNSFKLLEIAGRL*SESLRY Trigger: GTACCGAAGAGATTCTGACCATAGTCTCCCTGCTAT...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTACACAGAGAAACCCTGTCTCAAGTGGTTTACCCCTTAAGAAATGAACAAGACATCCATGGTAGCTaGCATCACAATCACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLHRETLSQVVYPLRNEQDIHGS*HHNHFE Trigger: CTCAAAGTGATTGTGATGTCAGCTACCATGGATGTC...TTGTTCATTTCTTAAGGGGTAAACCACTTGAGACAGGGTTTCTCTGTGTAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGTTGGCTTCCTAGTTCCAGGAAACCTGCTGGTTTCCTGAAAGCACTGTTCAGCGATGTTGGTTaGAATGATCACTTTGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LKSWLPSSRKPAGFLKALFSDVG*NDHFAI Trigger: TATCGCAAAGTGATCATTTCAACCAACATCGCTGAA...CAGTGCTTTCAGGAAACCAGCAGGTTTCCTGGAACTAGGAAGCCAACTTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTCATTGCTAGGAGCTaGAGTATTACACTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREFIARS*SITLAR Trigger: CCTGGCCAGTGTAATACTTCAGCTCCTAGCAATGAA...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTATCTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGTTCTCAGCTTCCTCCTaGAGTAGTCAGGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFYLKYTQVDIKVEVRAGFSASS*SSQGQP Trigger: AGGCTGCCCCTGACTACTTCAGGAGGAAGCTGAGAA...CCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAGATAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACACTTTCGCCTCTTCTGTaGAGTCTTCACCACTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSKCLEGSLAHLLLINTLSPLL*SLHHSK Trigger: TTTGGAGTGGTGAAGACTGCACAGAAGAGGCGAAAG...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSARVSLRSFSNSFKLLERVILL*FNHARV Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREISSVQ*NLEDRR Trigger: CCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGAT...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | GAGACCAGAGAGAACAGAGCACATGTCCAAATCCGCTaGTCAGTTTTCTACACTACAGCAGTCTATAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETRENRAHVQIR*SVFYTTAVYRE Trigger: TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGCTCTGTTCTCTCTGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | GCACATGTCCAAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAAGCTCTATTGAAGTACTaGGAAAACAGGTCGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHVQIRLSVFYTTAVYREALLKY*ENRSTS Trigger: GGATGTCGACCTGTTTTCTCAGTACTTCAATAGAGC...TTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTTGGACATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACACCCCTCGAGATGACATaGTTGGCATTGACATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSKCLEGSLAHLLLINTPLEMT*LALTSL Trigger: TAAAGATGTCAATGCCAATCATGTCATCTCGAGGGG...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | AACTGCCCACTGTCTTCGAAGTGCCTTGAAGGCAGTTaGGCCCATTTGTTGCTTATAAATACAATTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCPLSSKCLEGS*AHLLLINTIHC Trigger: ACAGTGAATTGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAGTGGGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | TTATATACTAGAACTGTTCTTTTATGTTTGAGACCAGAGAGAACAGAGCACATGCTCTCAGCTGTGCTCTaGCTTCAGCTACTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYTRTVLLCLRPERTEHMLSAVL*LQLLAA Trigger: TGCTGCTAGTAGCTGAAGTCAGAGCACAGCTGAGAG...CATGTGCTCTGTTCTCTCTGGTCTCAAACATAAAAGAACAGTTCTAGTATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTATCTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGCGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFYLKYTQVDIKVEVRAGRCWLK*SLCDSP Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...CCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAGATAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | AGCTGGAGCACAAGGATTTGTGCCACAGTAAATACTTaGCTGTTTTGGAATCCTGTTATAAGAGATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SWSTRICATVNT*LFWNPVIRDAN Trigger: ATTTGCATCTCTTATAACAGGATTCCAAAACAGCAAAGTATTTACTGTGGCACAAATCCTTGTGCTCCAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | CACAAGGATTTGTGCCACAGTAAATACTTTGCTGTTTaGGAATCCTGTTATAAGAGATGCAAATGTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKDLCHSKYFAV*ESCYKRCKCSH Trigger: GTGAGAACATTTGCATCTCTTATAACAGGATTCCAAAACAGCAAAGTATTTACTGTGGCACAAATCCTTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| 3UTR CAA 72 bp | TTTCGAGCATTATATACTAGAACTGTTCTTTTATGTTaGAGACCAGAGAGAACAGAGCACATGTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FRALYTRTVLLC*RPERTEHMSKS Trigger: GGATTTGGACATGTGCTCTGTTCTCTCTGGTCTCAAACATAAAAGAACAGTTCTAGTATATAATGCTCGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS CCA 90 bp | CCAGGTTTCGGAGCTGAGCCAATAGCTGCCCCCGCGCCCGGAAGATaGGCAGACTCCGGCGCTGCAGCTCCAGGGCCTCGCGGTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGFGAEPIAAPAPGR*ADSGAAAPGPRGRD Trigger: GTCCCTACCGCGAGGCCCTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS TCA 90 bp | GAGCCAGTTTCCCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGCAGACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPVSPMRTALSRFRS*ANSCPRARKMGRLR Trigger: CCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGGGAAACTGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS TCA 90 bp | AAGCAGGAGCTTCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGCAGACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KQELPMRTALSRFRS*ANSCPRARKMGRLR Trigger: CCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGAAGCTCCTGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS TCA 90 bp | CTGTATAGCCAACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGCAGACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYSQPMRTALSRFRS*ANSCPRARKMGRLR Trigger: CCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGTTGGCTATACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| CDS-3UTR CAA 90 bp | CTCCAGGGTAAGGTCCTAGGCCTCACCCTGGAGCCAGTCACTGCAAGCTACTGTGCCCTTTGGGGCCCCTaGAAAGACTCGAAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGKVLGLTLEPVTASYCALWGP*KDSKLL Trigger: CAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGGGC...ACAGTAGCTTGCAGTGACTGGCTCCAGGGTGAGGCCTAGGACCTTACCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS CCA 90 bp | CAACCAGCTTCCCGAGTTCTGTCCTCTTCTCATCTGAGACTCTGGTaGCAAGAGAGATGGCAGCCACTCGACGGGGCTGGGTCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QPASRVLSSSHLRLW*QERWQPLDGAGSQR Trigger: TCGCTGTGACCCAGCCCCGTCGAGTGGCTGCCATCTCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACAGAACTCGGGAAGCTGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS TCA 90 bp | CACTGTATAGCCAACCAGCTTCCCGAGTTCTGTCCTCTTCTCATCTaGGACTCTGGTGGCAAGAGAGATGGCAGCCACTCGACGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCIANQLPEFCPLLI*DSGGKRDGSHSTGL Trigger: CAGCCCCGTCGAGTGGCTGCCATCTCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACAGAACTCGGGAAGCTGGTTGGCTATACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CAA 90 bp | TTATGTTTGGAAGACAGCTGTGATCTAAGCTCCAGGCCCAGCCATGCTGGCAGCCATCTGGGAGGTGCCTaGCGATGTCTCTGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLEDSCDLSSRPSHAGSHLGGA*RCLCRS Trigger: AGACCTGCAGAGACATCGCAAGGCACCTCCCAGATG...GCTGCCAGCATGGCTGGGCCTGGAGCTTAGATCACAGCTGTCTTCCAAACATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAGTCTCCTATGGCTCCTCCCCCAGTCATGAGAGCTCAAGGGGCTGTGCTCCATCTGTCAGGAACTaGATCCTGGTGTCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVVSYGSSPSHESSRGCAPSVRN*ILVSSE Trigger: CTCAGAAGACACCAGGATCAAGTTCCTGACAGATGG...AGCACAGCCCCTTGAGCTCTCATGACTGGGGGAGGAGCCATAGGAGACTACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCTGTCTTTGGGGCCCCTaGAAAGACTCGAAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCCLWGP*KDSKLL Trigger: CAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGACA...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTTCAAGACCACTGTCTTaGGGGCCCCTTGAAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: QSPKLPGETRGTSSASHASRPLS*GPLERL Trigger: GAGTCTTTCAAGGGGCCCCAAAGACAGTGGTCTTGA...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGAGTTTCAGGACAGGCAGGGCTACACAGAGAAACCCTGTCTCAAGTGGTTTGCAGGTCTTGCTCATaGCTTCGATCTCCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ERVSGQAGLHRETLSQVVCRSCS*LRSPPD Trigger: GTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGCA...AACCACTTGAGACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTGAAACTCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CAA 90 bp | CACCGTCATCTTCTCGAACTTCTCAAACTCGTCCTCAGTGTAGAGTCGGTAGCAGAGGAAGGACGAGCATaGAAGGGCAGCCATCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRHLLELLKLVLSVESVAEEGRA*KGSHLG Trigger: TCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTC...TGCTACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGATGACGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGATCATTCTGCGCCAGGCCTGGGTCTTaGATACTCTCTGTACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VRPEAQAQLLMLYVGSFCARPGS*ILSVQL Trigger: TAGCTGTACAGAGAGTATCAAAGACCCAGGCCTGGC...GCAGAATGATCCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAACCACGCAGGCAGGCTaGCAGTGGAAGAGGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LMLYVGSFCTGESEKLQQTTQAG*QWKRTD Trigger: ATCTGTCCTCTTCCACTGCAAGCCTGCCTGCGTGGT...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCATCCTGGAACGGTTCAGTTTCTGGCCGTTCTCAGCTTCCTCCTGAAGTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WQHPGTVQFLAVLSFLLKSVQWN*EDRRIV Trigger: GACTATCCTCCTGTCCTCCAAATTCCACTGTACCGA...CTTCAGGAGGAAGCTGAGAACGGCCAGAAACTGAACCGTTCCAGGATGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
||
| CDS TCA 90 bp | ACGCAGAAGCATGCCATCTGTCAGGAACTTGATCCTGGTGTCTTCTaGGGTGACATCCTCAAAGCGCACTGTATAGCCAACCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TQKHAICQELDPGVF*GDILKAHCIANQLP Trigger: GGGAAGCTGGTTGGCTATACAGTGCGCTTTGAGGATGTCACCTCAGAAGACACCAGGATCAAGTTCCTGACAGATGGCATGCTTCTGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTAGAACACCAGGATGTCTaGAGAAGCAGGAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSVLHSMHEALGSTGEGVEHQDV*RSRSFL Trigger: CAGGAAGCTCCTGCTTCTCAAGACATCCTGGTGTTC...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATTGCAGGTCTTGCTCATaGCTTCGATCTCCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IQSPKLPGETRGTSSASHCRSCS*LRSPPD Trigger: GTCAGGAGGAGATCGAAGCAATGAGCAAGACCTGCA...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | GAACGTGTAAGTCTTATCCGACTCCGGCATATGAGGAATCTGAGGCTCAGAAGTGAGGAAGGACGAGCATaGAAGGGCAGCCATCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERVSLIRLRHMRNLRLRSEEGRA*KGSHLG Trigger: TCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTC...ACTTCTGAGCCTCAGATTCCTCATATGCCGGAGTCGGATAAGACTTACACGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | GAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTTGGAGGACAGGAGGATAGCCCTTTGGGGCCCCTaGAAAGACTCGAAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETMVRISSVQWNLEDRRIALWGP*KDSKLL Trigger: CAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGGGC...TATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR CAA 90 bp | CACCGTCATCTTCTCGAACTTCTCAAACTCGTCCTCAGTGTAGAGTCGGTAGCACTTTGCGATAGCCCTTaGGGGCCCCTTGAAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: HRHLLELLKLVLSVESVALCDSP*GPLERL Trigger: GAGTCTTTCAAGGGGCCCCAAAGGGCTATCGCAAAG...TGCTACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGATGACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155044.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QSPKLPGETRGTSSASHASVQWN*EDRRIV Trigger: AACTATCCTCCTGTCCTCCAAATTCCACTGTACCGA...AGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGATTGGCTCAGTGGCAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATATAGAAGATCTGGATaGGATGCTGCCGACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WGLAQWQSVLHSMHEALGYRRSG*DAADPQ Trigger: TTGAGGGTCGGCAGCATCCAATCCAGATCTTCTATA...TCCCAGAGCCTCATGCATGCTATGCAAAACACTTTGCCACTGAGCCAATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAAATGTCTCTGCAGGTCTaGCTCATTGCTTCGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: LMLYVGSFCTGESEKLQQMSLQV*LIASIS Trigger: GGAGATCGAAGCAATGAGCAAGACCTGCAGAGACAT...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTACATCTGGGAGGTGCCTaGCGATGTCTCTGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LESGSLAANLCLEDSCDLHLGGA*RCLCRS Trigger: AGACCTGCAGAGACATCGCAAGGCACCTCCCAGATG...TAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | CTCTTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTTTGCGATAGCCCTTaGGGGCCCCTTGAAAGACTC | + |
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Preference number: 5 (lower is better) Translates to: LLESGSLAANLCLEDSCDLCDSP*GPLERL Trigger: GAGTCTTTCAAGGGGCCCCAAAGGGCTATCGCAAAG...ATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTGTTTTGCATAGCATGCATGAGGCTCTGGGATCCACGGGAGAGGGAGTATCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTT | + |
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Preference number: 5 (lower is better) Translates to: QSVLHSMHEALGSTGEGVSVQWN*EDRRIV Trigger: AACTATCCTCCTGTCCTCCAAATTCCACTGTACCGA...TACTCCCTCTCCCGTGGATCCCAGAGCCTCATGCATGCTATGCAAAACACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | GATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGACCACGCAGGCAGGCTaGCAGTGGAAGAGGACAGAT | + |
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Preference number: 5 (lower is better) Translates to: DHSARVSLRSFSNSFKLLTTQAG*QWKRTD Trigger: ATCTGTCCTCTTCCACTGCAAGCCTGCCTGCGTGGT...CAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | AAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGCTCTACGTAGGCATTTGGGACTTTCATaGCTAGGAGCTGAAGTATTA | + |
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Preference number: 5 (lower is better) Translates to: KLPGETRGTSSASHALRRHLGLS*LGAEVL Trigger: TAATACTTCAGCTCCTAGCAATGAAAGTCCCAAATG...CCTACGTAGAGCATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATCTAAGCTCCGAACACCAGGATGTCTaGAGAAGCAGGAGCTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: SGSLAANLCLEDSCDLSSEHQDV*RSRSFR Trigger: TCGGAAGCTCCTGCTTCTCAAGACATCCTGGTGTTC...GGAGCTTAGATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
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| CDS CCA 90 bp | TCCACAGATAGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGGATAGTCTGGAGAAGGTTTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: STDSRETMVRISSVQ*NLEDRRIVWRRFGH Trigger: ATGTCCAAACCTTCTCCAGACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCTATCTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
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| CDS-3UTR CAA 90 bp | ATTAATAGCATCAAAAATACAAAGACTGGCCAGGTGGTGGTGCACACCTTCAATGAGGAAGGACGAGCATaGAAGGGCAGCCATCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: INSIKNTKTGQVVVHTFNEEGRA*KGSHLG Trigger: TCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTC...ATTGAAGGTGTGCACCACCACCTGGCCAGTCTTTGTATTTTTGATGCTATTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | ATTCAGTCTCCAAAACTGCCTGGTGAGACCCGAGGCACAAGCTCAGCTTCTCATGAGGTTTCAGCGATGTaGGTTGAAATGATCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: IQSPKLPGETRGTSSASHEVSAM*VEMITL Trigger: CAAAGTGATCATTTCAACCAACATCGCTGAAACCTC...ATGAGAAGCTGAGCTTGTGCCTCGGGTCTCACCAGGCAGTTTTGGAGACTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | CTCATGCTCTACGTAGGATCATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAACATTTGGGACTTTCATaGCTAGGAGCTGAAGTATTA | + |
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Preference number: 5 (lower is better) Translates to: LMLYVGSFCTGESEKLQQHLGLS*LGAEVL Trigger: TAATACTTCAGCTCCTAGCAATGAAAGTCCCAAATG...TTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATGATCCTACGTAGAGCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 ENSMUST00000146203.8 |
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| CDS-3UTR CAA 90 bp | CATTCTGCACGGGTGAGTCTGAGAAGCTTCAGCAATTCTTTTAAGCTCTTGGAGGACAGGAGGATAGTTTaGGCAAATCTGGGCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: HSARVSLRSFSNSFKLLEDRRIV*ANLGSK Trigger: TTTAGAGCCCAGATTTGCCAAAACTATCCTCCTGTC...CTCCAAGAGCTTAAAAGAATTGCTGAAGCTTCTCAGACTCACCCGTGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | CTGTCTTCGAAGTGCCTTGAAGGCAGTTTGGCCCATTTGTTGCTTATAAATACAGACATCACAATCACTTaGAGAGGCAGTTTCCCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LSSKCLEGSLAHLLLINTDITIT*RGSFPS Trigger: GCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGTC...TGTATTTATAAGCAACAAATGGGCCAAACTGCCTTCAAGGCACTTCGAAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCATGTCTCTGCAGGTCTaGCTCATTGCTTCGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSACQFSTLQQSIENCFPMSLQV*LIASIS Trigger: GGAGATCGAAGCAATGAGCAAGACCTGCAGAGACAT...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | AAATCCGCTTGTCAGTTTTCTACACTACAGCAGTCTATAGAGAATTGTTTCCCCACTGTGGGATCTGAGTaGTTTTCCCAGAGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KSACQFSTLQQSIENCFPTVGSE*FSQSQF Trigger: AAACTGGCTCTGGGAAAACAACTCAGATCCCACAGT...GGGGAAACAATTCTCTATAGACTGCTGTAGTGTAGAAAACTGACAAGCGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS-3UTR CAA 90 bp | CTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGGATTGGCTCCATTTGGGACTTTCATaGCTAGGAGCTGAAGTATTA | + |
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Preference number: 5 (lower is better) Translates to: LKYTQVDIKVEVRAGDWLHLGLS*LGAEVL Trigger: TAATACTTCAGCTCCTAGCAATGAAAGTCCCAAATG...GAGCCAATCCCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000146203.8 |
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| CDS-3UTR CAA 90 bp | CTCTTGGAGTCTGGAAGTCTGGCTGCAAACTTATGTTTGGAAGACAGCTGTGATACTAGCAGCATATTCTaGCTGTTGACAAAATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLESGSLAANLCLEDSCDTSSIF*LLTKFS Trigger: AGAGAATTTTGTCAACAGCAAGAATATGCTGCTAGT...ATCACAGCTGTCTTCCAAACATAAGTTTGCAGCCAGACTTCCAGACTCCAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTATCTAAAATACACACAGGTAGACATTAAAGTAGAAGTGAGGGCTGGGACTAGCAGCATATTCTaGCTGTTGACAAAATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: IFYLKYTQVDIKVEVRAGTSSIF*LLTKFS Trigger: AGAGAATTTTGTCAACAGCAAGAATATGCTGCTAGT...CCCAGCCCTCACTTCTACTTTAATGTCTACCTGTGTGTATTTTAGATAGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CCA 72 bp | TCCGGCGCTGCAGCTCCAGGGCCTCGCGGTAGGGACTaGCCGAAGGCTGGGCCAGCGGCGGCGTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGAAAPGPRGRD*PKAGPAAASAS Trigger: GGAGGCAGACGCCGCCGCTGGCCCAGCCTTCGGCCAGTCCCTACCGCGAGGCCCTGGAGCTGCAGCGCCGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS CCA 72 bp | GGAGCTGAGCCAATAGCTGCCCCCGCGCCCGGAAGATaGGCAGACTCCGGCGCTGCAGCTCCAGGGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: GAEPIAAPAPGR*ADSGAAAPGPR Trigger: GCGAGGCCCTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049048.13 ENSMUST00000108527.8 ENSMUST00000124464.2 |
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| CDS TCA 72 bp | TCCCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPMRTALSRFRS*ANSCPRARKMG Trigger: GCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS TCA 72 bp | CAACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: QPMRTALSRFRS*ANSCPRARKMG Trigger: GCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049048.13 |
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| CDS TCA 72 bp | CTTCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LPMRTALSRFRS*ANSCPRARKMG Trigger: GCCCATCTTCCGGGCGCGGGGGCAGCTATTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
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| CDS CCA 72 bp | CTGGTGGCAAGAGAGATGGCAGCCACTCGACGGGGCTaGGTCACAGCGATGATGCCCTGGCGGCTAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: LVAREMAATRRG*VTAMMPWRLIP Trigger: GGGAATTAGCCGCCAGGGCATCATCGCTGTGACCCAGCCCCGTCGAGTGGCTGCCATCTCTCTTGCCACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CCA 72 bp | GCTTCCCGAGTTCTGTCCTCTTCTCATCTGAGACTCTaGTGGCAAGAGAGATGGCAGCCACTCGACGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASRVLSSSHLRL*WQERWQPLDGA Trigger: AGCCCCGTCGAGTGGCTGCCATCTCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACAGAACTCGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS TCA 72 bp | GCCAACCAGCTTCCCGAGTTCTGTCCTCTTCTCATCTaGGACTCTGGTGGCAAGAGAGATGGCAGCCACTCG | + |
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Preference number: 6 (lower is better) Translates to: ANQLPEFCPLLI*DSGGKRDGSHS Trigger: CGAGTGGCTGCCATCTCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACAGAACTCGGGAAGCTGGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CCA 72 bp | GCCCTGGCGGCTAATTCCCCCTTCATAGAGGTACTGTaGGATCTGAGTTGTTTTCCCAGAGCCAGTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ALAANSPFIEVL*DLSCFPRASFP Trigger: GGGGAAACTGGCTCTGGGAAAACAACTCAGATCCCACAGTACCTCTATGAAGGGGGAATTAGCCGCCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CAA 72 bp | CAGCTAGTACCTCAAGACCACTGTCTTTGGGGCCCCTaGAAAGACTCGAAGCTGCTGCGAATAGGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: QLVPQDHCLWGP*KDSKLLRIGQG Trigger: TCCCTGCCCTATTCGCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGACAGTGGTCTTGAGGTACTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
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| CDS CCA 72 bp | CTCTCTGTACAGCTAGTACCTCAAGACCACTGTCTTTaGGGCCCCTTGAAAGACTCGAAGCTGCTGCGAATA | + |
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Preference number: 6 (lower is better) Translates to: LSVQLVPQDHCL*GPLKDSKLLRI Trigger: TATTCGCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGACAGTGGTCTTGAGGTACTAGCTGTACAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124464.2 |
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| CDS CCA 72 bp | AGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTaGAATTTGGAGGACAGGAGGATAGTCTGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SRETMVRISSVQ*NLEDRRIVWRR Trigger: CCTTCTCCAGACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
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| CDS CAA 90 bp | GAGTCTGAAATTGCTTCACGCAGAAGCATGCCATCTGTCAGGAACTaGATCCTGGTGTCTTCTGAGGTGACATCCTCAAAGCGCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: ESEIASRRSMPSVRN*ILVSSEVTSSKRTV Trigger: TACAGTGCGCTTTGAGGATGTCACCTCAGAAGACACCAGGATCAAGTTCCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CAA 72 bp | ATTGCTTCACGCAGAAGCATGCCATCTGTCAGGAACTaGATCCTGGTGTCTTCTGAGGTGACATCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: IASRRSMPSVRN*ILVSSEVTSSK Trigger: CTTTGAGGATGTCACCTCAGAAGACACCAGGATCAAGTTCCTGACAGATGGCATGCTTCTGCGTGAAGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108527.8 |
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| CDS CAA 90 bp | GATAGCAGGGAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTCTGGAGAAGGTTTGGACATGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DSRETMVRISSVQWN*EDRRIVWRRFGHEV Trigger: GACTTCATGTCCAAACCTTCTCCAGACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTCCCTGCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
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| CDS CAA 72 bp | GAGACTATGGTCAGAATCTCTTCGGTACAGTGGAATTaGGAGGACAGGAGGATAGTCTGGAGAAGGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ETMVRISSVQWN*EDRRIVWRRFG Trigger: TCCAAACCTTCTCCAGACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTCTGACCATAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146203.8 |
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