Pregenerated sensors for DHX29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042426Ensembl transcript IDs: ENSMUST00000038574.7, ENSMUST00000224176.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTaGTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACCAA | + |
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Preference number: 1 (lower is better) Translates to: HHRYKGARKVHVERM*SFPPRRLQVNGQNQ Trigger: TTGGTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| 3UTR GCA 72 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTaGTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGC | + |
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Preference number: 3 (lower is better) Translates to: YKGARKVHVERM*SFPPRRLQVNG Trigger: GCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGGCGGGCGCCGGCCTaGCCACCGGCTTCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPRRAPA*PPASCS Trigger: AGAGCAAGAAGCCGGTGGCCAGGCCGGCGCCCGCCG...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGAGGACGGGTGCACCTaGGCTTTGCCTTGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQEDGCT*ALPWAV Trigger: GACAGCCCAAGGCAAAGCTCAGGTGCACCCGTCCTC...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACACCGGCTTCTTGCTCTaGGCTTCCCCAACAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNTGFLL*ASPTAP Trigger: CGGAGCTGTTGGGGAAGCCCAGAGCAAGAAGCCGGT...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCAGGAAGTGTGGCACCTaGGTGCTCTTGCCACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TKELEKSTLKECALSLPARKCGT*VLLPLP Trigger: GGGGAGTGGCAAGAGCACCCAGGTGCCACACTTCCT...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACGTAGGAGGGAGTAACTaGTGGACAGACTGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNVGGSN*WTDCPF Trigger: GAAGGGGCAGTCTGTCCATCAGTTACTCCCTCCTAC...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGCTTTCAGGACGCTGCTaGTGCTGTTGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQLSGRC*CCCCCC Trigger: GCAGCAGCAACAACAGCAGCAGCAGCGTCCTGAAAG...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGTTGAGTCCCGGTGTTTaGACACAGGTAGCTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQLSPGV*TQVAAV Trigger: GACAGCAGCTACCTGTGTTCAAACACCGGGACTCAA...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCCTCTGTCATCACGGCTaGCAGTGTTGCCACTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TKELEKSTLKECALSLPALCHHG*QCCHWF Trigger: GAACCAGTGGCAACACTGGCAGCCGTGATGACAGAG...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGAGAAGAGCAATGTCCTaGAAAGAGAGCGTCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQRRAMS*KESVCG Trigger: GCCGCAGACGCTCTCTTTCCAGGACATTGCTCTTCT...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACGGACCTCATCGACAATaGCATGAGACACATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNGPHRQ*HETHQP Trigger: TGGCTGATGTGTCTCATGTCATTGTCGATGAGGTCC...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACCGGACTTTGTACACATaGTCTTCCCCACACTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNRTLYT*SSPHCR Trigger: ACGACAGTGTGGGGAAGATCATGTGTACAAAGTCCG...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACCTCAGCTTCTGTGGCTaGAGCAGGCTTTTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNLSFCG*SRLFLL Trigger: GAGAAGAAAAAGCCTGCTCCAGCCACAGAAGCTGAG...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACGTCCAGAAGTCTGGCTaGAAGGTTCAAGTACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNVQKSG*KVQVPL Trigger: CAAAGGTACTTGAACCTTGCAGCCAGACTTCTGGAC...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCCAGAGTTTCCACAATTaGGTCCCGGTGTTTGAACAC | + |
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Preference number: 4 (lower is better) Translates to: TKELEKSTLKECALSLPAQSFHN*VPVFEH Trigger: GTGTTCAAACACCGGGACTCAATTGTGGAAACTCTG...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGTTAATGGCCAGAACCCAGATCACACTTCATaGTGTGAAGACAGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VERMCSFPPRRLQVNGQNPDHTS*CEDRVP Trigger: AGGAACTCTGTCTTCACATCATGAAGTGTGATCTGG...GTTCTGGCCATTAACCTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCCAGCTGGGAGACGATaGAAATCCTGCAGCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPPAGRR*KSCSFH Trigger: GTGAAAGCTGCAGGATTTTCATCGTCTCCCAGCTGG...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCTTAGGGTCTTCCTCCTaGCTTTTGGTTTTCGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TKELEKSTLKECALSLPALGSSS*LLVFVC Trigger: GCAGACGAAAACCAAAAGGCAGGAGGAAGACCCTAA...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCGAGGGTCTAAGGCTTTaGAGAGGAAGTCTTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPEGLRL*RGSLQG Trigger: CCCCTGAAGACTTCCTCTCCAAAGCCTTAGACCCTC...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCAACGAGCAGGAAATCTaGCTGGACACTTCTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: YKGARKVHVERMCSFPPRNEQEI*LDTSLM Trigger: CATGAGAGAAGTGTCCAGTCAGATTTCCTGCTCGTT...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACACTCCCCGTTTCACCTaGTACCACCACCACCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TSTSFQDRIFILTLQADNTPRFT*YHHHPV Trigger: CACCGGGTGGTGGTGGTAGCAGGTGAAACGGGGAGT...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | CTGACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACCCAGGTCTTCTGCACTaGTTGGCTCCAAGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: LTSTSFQDRIFILTLQADPGLLH*LAPRTA Trigger: CGCTGTCCTTGGAGCCAACCAGTGCAGAAGACCTGG...GTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGAGGGTAACTTCTTCCTaGAATTCTGAGAATAGGACA | + |
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Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQRVTSS*NSENRT Trigger: TGTCCTATTCTCAGAATTTCAGGAAGAAGTTACCCT...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGAAGTGTGGCACCTGGGTaGTCTTGCCACTCCCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGSVAPG*SCHSPF Trigger: AAACGGGGAGTGGCAAGAGCACCCAGGTGCCACACT...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGACTGCACTTCTGGCTCTaGAAGCAGACACGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CKCHGKYIEYHHRYKGARLHFWL*KQTRRP Trigger: GGGCCGCCGTGTCTGCTTCCAGAGCCAGAAGTGCAG...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCAAACCTTCTGTCACTTaGCAGGAGGTCATACAACTG | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPKPSVT*QEVIQL Trigger: CAGTTGTATGACCTCCTGTCAAGTGACAGAAGGTTT...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGAAAGCATTGTAGATCGTaGGGTGGTCCGAGTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGKHCRS*GGPSRP Trigger: TGGCCGACTCGGACCACCTCACGATCTACAATGCTT...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGCTGTTCTGCTTTTTATaGTCATTGATCACTCCGATA | + |
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Preference number: 4 (lower is better) Translates to: ARKVHVERMCSFPPRRLQLFCFL*SLITPI Trigger: TATCGGAGTGATCAATGAGCATAAAAAGCAGAACAG...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCTGCTGCTGTTGTTGCTaGTGCTGCTTCAACTTATTC | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPCCCCC*CCFNLF Trigger: GAATAAGTTGAAGCAGCAGCAGCAACAACAGCAGCA...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGATCGCTTTCAGGACGCTaGTGCTGCTGTTGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGSLSGR*CCCCCC Trigger: GCAGCAACAACAGCAGCAGCAGCGTCCTGAAAGCGA...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCACCACCACCACCCGGTaGCTCTTCAGAGTTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: CHGKYIEYHHRYKGARKVTTTTR*LFRVST Trigger: TGTGGAAACTCTGAAGAGGCACCGGGTGGTGGTGGT...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCAATTTCATTAACTCCTaGTTCACATCCTCGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: YKGARKVHVERMCSFPPRNFINS*FTSSSV Trigger: GACACTCGAGGATGTGAAGCAGGAGTTAATGAAATT...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | CTGACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACCTTCCTCCTGCCTTTTaGTTTTCGTCTGCTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LTSTSFQDRIFILTLQADLPPAF*FSSAVE Trigger: CTCCACAGCAGACGAAAACCAAAAGGCAGGAGGAAG...GTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCTGCTCCACTCTGAACTaGGATGTATTCCTGATACTT | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPCSTLN*DVFLIL Trigger: AAGTATCAGGAATACATCCCAGTTCAGAGTGGAGCA...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCAAGCCTCCTTCTTGCTaGGCTTTCTTCCACCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: EYHHRYKGARKVHVERMCKPPSC*AFFHPR Trigger: TCTAGGGTGGAAGAAAGCCCAGCAAGAAGGAGGCTT...GCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACTCCTTCCCTCCCAGCTaGGAGACGATGAAAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSTSFQDRIFILTLQADNSFPPS*ETMKIL Trigger: CAGGATTTTCATCGTCTCCCAGCTGGGAGGGAAGGA...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCGTTCCTCTGGCAATATaGGATCTCAGAGCGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: CHGKYIEYHHRYKGARKVVPLAI*DLRAEA Trigger: GGCTTCCGCTCTGAGATCTCATATTGCCAGAGGAAC...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | ATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGATTCCATTGAACACAGGTAGCTaGTGTCTCTCCTTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ISGPYLYLNFTSRQPWIPLNTGS*CLSFRS Trigger: GCTCCTGAAGGAGAGACAGCAGCTACCTGTGTTCAA...TGGAATCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCAAGAGCTCATCTGGCTaGTTTCATGGTACTTATTTT | + |
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Preference number: 4 (lower is better) Translates to: YKGARKVHVERMCSFPPRKSSSG*FHGTYF Trigger: AAAATAAGTACCATGAAAGCAGCCAGATGAGCTCTT...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAGGAGCCTCTGATACTTaGGTGTGCTCTGTAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CKCHGKYIEYHHRYKGARGASDT*VCSVAS Trigger: GGAGGCTACAGAGCACACCCAAGTATCAGAGGCTCC...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGAGAGATTCTTCGGGGCTaGGTGCAGACTATGTTACAC | + |
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Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGEILRG*VQTMLH Trigger: GTGTAACATAGTCTGCACCCAGCCCCGAAGAATCTC...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTGCCAGTGTTGCCACTaGTTCGAGACAGCCAAATAT | + |
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Preference number: 4 (lower is better) Translates to: EYHHRYKGARKVHVERMCCQCCH*FETAKY Trigger: ATATTTGGCTGTCTCGAACCAGTGGCAACACTGGCA...GCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCAAGTTCCTTACATCGTaGGGTTCTTTCTTTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPKFLTS*GSFFLP Trigger: AGGTAAAAAGAAAGAACCTCACGATGTAAGGAACTT...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCTCCTTCAATATTTCTaGACTGAGGACTTTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: RYKGARKVHVERMCSFPPLLQYF*TEDFCL Trigger: TAGACAAAAGTCCTCAGTTCAGAAATATTGAAGGAG...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACAGCAGGAAATCTGACTaGACACTTCTCTCATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSFQDRIFILTLQADNSRKSD*TLLSWT Trigger: GGTCCATGAGAGAAGTGTCCAGTCAGATTTCCTGCT...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCTCTCAGGTAGACTCTaGTGTACCTCACCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHGKYIEYHHRYKGARKVLSGRL*CTSPSP Trigger: AGGAGAAGGTGAGGTACACCAGAGTCTACCTGAGAG...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | GAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCATTCCTGATACTTTTTaGCTCCCCCAGCTTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EYHHRYKGARKVHVERMCIPDTF*LPQLYL Trigger: CAAGTAAAGCTGGGGGAGTCAAAAAGTATCAGGAAT...GCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | ATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGATTCCATCCGTCCAGTGTCAATaGCAAACACAACATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISGPYLYLNFTSRQPWIPSVQCQ*QTQHQE Trigger: TTCCTGATGTTGTGTTTGTCATTGACACTGGACGGA...TGGAATCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCTCAAAGGAGGGGTTTaGACTCTTGGGAAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSFQDRIFILTLQADNLKGGV*TLGKIL Trigger: AAGAATCTTCCCAAGAGTCCAAACCCCTCCTTTGAG...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCCCCTGTCGCTGTTCTaGTTTTTATGCTCATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CHGKYIEYHHRYKGARKVPLSLF*FLCSLI Trigger: GATCAATGAGCATAAAAAGCAGAACAGCGACAGGGG...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | GAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTTTAGGAAGTTCCTCTaGCAATATGAGATCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EYHHRYKGARKVHVERMCFRKFL*QYEISE Trigger: CTCTGAGATCTCATATTGCCAGAGGAACTTCCTAAA...GCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGATCACACTTCATGATGTaGAGACAGAGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKCHGKYIEYHHRYKGARSHFMM*RQSSSR Trigger: TCTGGAGGAACTCTGTCTTCACATCATGAAGTGTGA...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGAATCCTTTCGACCAATTaGTGTGATGAATGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGILSTN*CDEWRL Trigger: AAGTCTCCATTCATCACACCAATTGGTCGAAAGGAT...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR GCA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGATGCTGTTGTTGCTGCTaGTGCTTCAACTTATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CKCHGKYIEYHHRYKGARCCCCC*CFNLFK Trigger: CTTGAATAAGTTGAAGCAGCAGCAGCAACAACAGCA...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGATCAAGTACCTTTGGTTaGGGTCAAACTTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGSSTFG*GQTFLL Trigger: AAGAAGAAAAGTTTGACCCCAACCAAAGGTACTTGA...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | TACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAAGGTTCAAGTACCTTTaGTTGGGGTCAAACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIEYHHRYKGARKVHVERRFKYL*LGSNFS Trigger: AGAAAAGTTTGACCCCAACCAAAGGTACTTGAACCT...TCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR TCA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGACTTCAAATTCTTGACTaGATCCTTCAGGAAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKCHGKYIEYHHRYKGARLQILD*ILQEVH Trigger: ATGCACTTCCTGAAGGATTCAGTCAAGAATTTGAAG...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
||
| CDS-3UTR GCA 90 bp | ACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGAATGAGAACTCTTAGCTaGTTAAAAATGACAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: TSFQDRIFILTLQADNRGMRTLS*LKMTAI Trigger: GATAGCTGTCATTTTTAAGCAGCTAAGAGTTCTCAT...TCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CCA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCATGCAAGAGTGTATTaGTCATGGCATCTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CHGKYIEYHHRYKGARKVHARVY*SWHLQY Trigger: ATATTGAAGATGCCATGACCAATACACTCTTGCATG...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 90 bp | TCGTACAGGCCAGCAGCCAGCACAGCTTTAAGAAGAGCAATGTCCTaGAAAGAGAGCGTCTGCGGCCCTTTCCTTCCCTCCCAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SYRPAASTALRRAMS*KESVCGPFLPSQLG Trigger: TCCCAGCTGGGAGGGAAGGAAAGGGCCGCAGACGCTCTCTTTCCAGGACATTGCTCTTCTTAAAGCTGTGCTGGCTGCTGGCCTGTACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 90 bp | CCATGCACGCCAGCTTCTCTGTCACGTCCACGGACTTTGTACACATaGTCTTCCCCACACTGTCGTACAGGCCAGCAGCCAGCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PCTPASLSRPRTLYT*SSPHCRTGQQPAQL Trigger: AAGCTGTGCTGGCTGCTGGCCTGTACGACAGTGTGGGGAAGATCATGTGTACAAAGTCCGTGGACGTGACAGAGAAGCTGGCGTGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 90 bp | TCCTCGGGATCCTCGGAGCCCCCTTTCTCGCTTTCAGGACGCTGCTaGTGCTGTTGTTGCTGCTGCTGCTTCAACTTATTCAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGSSEPPFSLSGRC*CCCCCCCFNLFKSL Trigger: CAAGCTCTTGAATAAGTTGAAGCAGCAGCAGCAACAACAGCAGCAGCAGCGTCCTGAAAGCGAGAAAGGGGGCTCCGAGGATCCCGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCCTGGCCACCGGCTTCTaGCTCTGGGCTTCCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TKELEKSTLKECALSLPALATGF*LWASPT Trigger: TGTTGGGGAAGCCCAGAGCAAGAAGCCGGTGGCCAG...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 90 bp | GCCAGCACAGCTTTAAGAAGAGCAATGTCCTGGAAAGAGAGCGTCTaGGGCCCTTTCCTTCCCTCCCAGCTGGGAGACGATGAAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASTALRRAMSWKESV*GPFLPSQLGDDENP Trigger: AGGATTTTCATCGTCTCCCAGCTGGGAGGGAAGGAAAGGGCCGCAGACGCTCTCTTTCCAGGACATTGCTCTTCTTAAAGCTGTGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 90 bp | AGCATCTTGCCAATTTTGACATTGACAGGCAAAGCGGCAAGGTGCTaGCCCAGCGGTGTCAGTTTAGGCTCATTGGGTTCGCAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SILPILTLTGKAARC*PSGVSLGSLGSQAP Trigger: TGGAGCCTGCGAACCCAATGAGCCTAAACTGACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 90 bp | CGGTGTTTGAACACAGGTAGCTGCTGTCTCTCCTTCAGGAGCCTCTaGTACTTGGGTGTGCTCTGTAGCCTCCTGAAGAGGCTCCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: RCLNTGSCCLSFRSL*YLGVLCSLLKRLLT Trigger: TGTTAGGAGCCTCTTCAGGAGGCTACAGAGCACACCCAAGTATCAGAGGCTCCTGAAGGAGAGACAGCAGCTACCTGTGTTCAAACACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 90 bp | ATGAGCATCTTGCCAATTTTGACATTGACAGGCAAAGCGGCAAGGTaGTGGCCCAGCGGTGTCAGTTTAGGCTCATTGGGTTCGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSILPILTLTGKAAR*WPSGVSLGSLGSQA Trigger: AGCCTGCGAACCCAATGAGCCTAAACTGACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | CGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCGCGGAAGCCTCCTTCTaGCTGGGCTTTCTTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RYKGARKVHVERMCSFPPAEASF*LGFLPP Trigger: GGGTGGAAGAAAGCCCAGCAAGAAGGAGGCTTCCGC...GGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 90 bp | TGTCCTGGAAAGAGAGCGTCTGCGGCCCTTTCCTTCCCTCCCAGCTaGGAGACGATGAAAATCCTGCAGCTTTCACCAATTTCATTAACT | + |
|
Preference number: 5 (lower is better) Translates to: CPGKRASAALSFPPS*ETMKILQLSPISLT Trigger: AGTTAATGAAATTGGTGAAAGCTGCAGGATTTTCATCGTCTCCCAGCTGGGAGGGAAGGAAAGGGCCGCAGACGCTCTCTTTCCAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 90 bp | TCCTCTAAGCCTTTAGAGCCCTCGCCCTTCTCCTCTTCGTCCTGTTaGTCAGCATATCTCAAAATCCACTCCTTCATATTCACCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSKPLEPSPFSSSSC*SAYLKIHSFIFTST Trigger: CGTGGAGGTGAATATGAAGGAGTGGATTTTGAGATATGCTGAGCAACAGGACGAAGAGGAGAAGGGCGAGGGCTCTAAAGGCTTAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038574.7 ENSMUST00000224176.2 |
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| CDS-3UTR CAA 90 bp | GCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCGTCTTCAGGGTTTAATTCAGGACTaGCTCCACTCTGAACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARKVHVERMCSFPPRRLQGLIQD*LHSELG Trigger: TCCCAGTTCAGAGTGGAGCAAGTCCTGAATTAAACC...CTGAAGACGGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 90 bp | TGCTCCTTTGCGTCCAGAAGTCTGGCTGCAAGGTTCAAGTACCTTTaGTTGGGGTCAAACTTTTCTTCTTCCTCTAAGCCTTTAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSFASRSLAARFKYL*LGSNFSSSSKPLEP Trigger: GGGCTCTAAAGGCTTAGAGGAAGAAGAAAAGTTTGACCCCAACCAAAGGTACTTGAACCTTGCAGCCAGACTTCTGGACGCAAAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 90 bp | ACATTTCCAGTATCTGCCTACGGCAACTTTCTCAAAGGAGGGGTTTaGACTCTTGGGAAGATTCTTCCTGACCCAGTCGATGAGGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPVSAYGNFLKGGV*TLGKILPDPVDEEL Trigger: CAATTCCTCATCGACTGGGTCAGGAAGAATCTTCCCAAGAGTCCAAACCCCTCCTTTGAGAAAGTTGCCGTAGGCAGATACTGGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCTTGCCAATTTTGACATaGACAGGCAAAGCGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YKGARKVHVERMCSFPPRLPILT*TGKAAR Trigger: CCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAA...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 90 bp | AGAACGCTTCTGCAGAATCTCCTTCAGGATAACGAGCAGGAAATCTaGCTGGACACTTCTCTCATGGACCTCATCGACAATGACATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTLLQNLLQDNEQEI*LDTSLMDLIDNDMR Trigger: TCTCATGTCATTGTCGATGAGGTCCATGAGAGAAGTGTCCAGTCAGATTTCCTGCTCGTTATCCTGAAGGAGATTCTGCAGAAGCGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | ACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCCAGATCCCGTGGTTTGTaGGTTTCCATTTTATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TKELEKSTLKECALSLPARSRGL*VSILLS Trigger: ACTCAATAAAATGGAAACCAACAAACCACGGGATCT...GGCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 90 bp | GGAGACGATGAAAATCCTGCAGCTTTCACCAATTTCATTAACTCCTaGTTCACATCCTCGAGTGTCAACAGTGACGTTCTGTTTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDDENPAAFTNFINS*FTSSSVNSDVLFRK Trigger: CTTCCTAAACAGAACGTCACTGTTGACACTCGAGGATGTGAAGCAGGAGTTAATGAAATTGGTGAAAGCTGCAGGATTTTCATCGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | CTGACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACGTCAGTTTAGGCTCATaGGGTTCGCAGGCTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTSTSFQDRIFILTLQADVSLGS*GSQAPI Trigger: AATTGGAGCCTGCGAACCCAATGAGCCTAAACTGAC...GTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCACTTTCAAAATAGATTaGTCCAGATTTGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YKGARKVHVERMCSFPPRTFKID*SRFAEP Trigger: TGGCTCTGCAAATCTGGACAAATCTATTTTGAAAGT...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAATGTGCTCTTTCCCTCCCCGCTGCTTTTTATGCTCATaGATCACTCCGATAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKGARKVHVERMCSFPPRCFLCS*ITPIIL Trigger: AAGGATTATCGGAGTGATCAATGAGCATAAAAAGCA...GCGGGGAGGGAAAGAGCACATTCTTTCAACGTGGACTTTTCTAGCTCCTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACTCTTCCTCCTGCCTTTaGGTTTTCGTCTGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSTSFQDRIFILTLQADNSSSCL*VFVCCG Trigger: TCCACAGCAGACGAAAACCAAAAGGCAGGAGGAAGA...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAGGAGGGTCTAAGGCTTaGGAGAGGAAGTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CKCHGKYIEYHHRYKGARGGSKA*ERKSSG Trigger: CCCTGAAGACTTCCTCTCCAAAGCCTTAGACCCTCC...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCATTGAGTCCCGGTGTTaGAACACAGGTAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHGKYIEYHHRYKGARKVIESRC*NTGSCC Trigger: ACAGCAGCTACCTGTGTTCAAACACCGGGACTCAAT...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | ACCTCCACATCATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCCGCTTGATCTTGAGTaGAGAGAACTGAATGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSTSFQDRIFILTLQADNPLDLE*RELNAE Trigger: CTCTGCATTCAGTTCTCTCAACTCAAGATCAAGCGG...GTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAATGATGTGGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAGGTTCATGTAGAGAATaGCATGCTGCGTACGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: CKCHGKYIEYHHRYKGARGSCRE*HAAYGY Trigger: GTAGCCGTACGCAGCATGCAATTCTCTACATGAACC...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | ATTTCAGGACCGTATCTTTATCTTAACTTTACAAGCAGACAACCGTGGATTCCAAGCATCTTGCCAATTTaGACATTGACAGGCAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISGPYLYLNFTSRQPWIPSILPI*TLTGKA Trigger: CGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCT...TGGAATCCACGGTTGTCTGCTTGTAAAGTTAAGATAAAGATACGGTCCTGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCTTCAAATCTTTCTCTaGTGTACAGCCGAAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CHGKYIEYHHRYKGARKVLQIFL*CTAESR Trigger: TCTGCTTTCGGCTGTACACAAGAGAAAGATTTGAAG...GACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
||
| CDS-3UTR CAA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGACCATGCAAGAGTGTATaGGTCATGGCATCTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: CKCHGKYIEYHHRYKGARPCKSV*VMASSI Trigger: TATTGAAGATGCCATGACCAATACACTCTTGCATGG...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
||
| CDS-3UTR CAA 90 bp | TACATTGAGTATCATCATCGTTACAAAGGAGCTAGAAAAGTCCACGTTGAAAGAAAAAGATCCCGTGGTTaGTTGGTTTCCATTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: YIEYHHRYKGARKVHVERKRSRG*LVSILL Trigger: CAATAAAATGGAAACCAACAAACCACGGGATCTTTT...TCTTTCAACGTGGACTTTTCTAGCTCCTTTGTAACGATGATGATACTCAATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS-3UTR CAA 90 bp | TGTAAATGTCATGGCAAATACATTGAGTATCATCATCGTTACAAAGGAGCTAGACCGAAAATGAGCATCTaGCCAATTTTGACATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CKCHGKYIEYHHRYKGARPKMSI*PILTLT Trigger: TGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGG...TCTAGCTCCTTTGTAACGATGATGATACTCAATGTATTTGCCATGACATTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | CTTCCCCAACAGCTCCGGCCTCTGCACTTCTGGCTCTaGAAGCAGACACGGCGGCCCGCATCGCCGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPQQLRPLHFWL*KQTRRPASPQL Trigger: GAGCTGCGGCGATGCGGGCCGCCGTGTCTGCTTCCAGAGCCAGAAGTGCAGAGGCCGGAGCTGTTGGGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038574.7 ENSMUST00000224176.2 |
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| CDS TCA 72 bp | GTTTGTAGGTCCCGGTTTACAGAGGACGGGTGCACCTaGGCTTTGCCTTGGGCTGTCTCCACCATGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: VCRSRFTEDGCT*ALPWAVSTMHA Trigger: GGCGTGCATGGTGGAGACAGCCCAAGGCAAAGCTCAGGTGCACCCGTCCTCTGTAAACCGGGACCTACAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | GAGGCTCCTAACAGGTGCCAGGTCTTCTGCACTGGTTaGCTCCAAGGACAGCGCAGCAAGATCTTCGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: EAPNRCQVFCTG*LQGQRSKIFVG Trigger: TCCGACGAAGATCTTGCTGCGCTGTCCTTGGAGCCAACCAGTGCAGAAGACCTGGCACCTGTTAGGAGCCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | CCAGCAGCCAGCACAGCTTTAAGAAGAGCAATGTCCTaGAAAGAGAGCGTCTGCGGCCCTTTCCTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PAASTALRRAMS*KESVCGPFLPS Trigger: GGAGGGAAGGAAAGGGCCGCAGACGCTCTCTTTCCAGGACATTGCTCTTCTTAAAGCTGTGCTGGCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 72 bp | CCAGCTTCTCTGTCACGTCCACGGACTTTGTACACATaGTCTTCCCCACACTGTCGTACAGGCCAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PASLSRPRTLYT*SSPHCRTGQQP Trigger: TGGCTGCTGGCCTGTACGACAGTGTGGGGAAGATCATGTGTACAAAGTCCGTGGACGTGACAGAGAAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | GGCGGCGGCTTGCTCCTTTGCGTCCAGAAGTCTGGCTaGAAGGTTCAAGTACCTTTGGTTGGGGTCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: GGGLLLCVQKSG*KVQVPLVGVKL Trigger: AAGTTTGACCCCAACCAAAGGTACTTGAACCTTGCAGCCAGACTTCTGGACGCAAAGGAGCAAGCCGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | TGGCTAAGCTCACCGCCGAGATTCTTCGGGGCTGGGTaGAGACTATGTTACACTTCCTGGCTCCACACTCAT | + |
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Preference number: 6 (lower is better) Translates to: WLSSPPRFFGAG*RLCYTSWLHTH Trigger: ATGAGTGTGGAGCCAGGAAGTGTAACATAGTCTGCACCCAGCCCCGAAGAATCTCGGCGGTGAGCTTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 72 bp | AACACAGGTAGCTGCTGTCTCTCCTTCAGGAGCCTCTaGTACTTGGGTGTGCTCTGTAGCCTCCTGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: NTGSCCLSFRSL*YLGVLCSLLKR Trigger: CCTCTTCAGGAGGCTACAGAGCACACCCAAGTATCAGAGGCTCCTGAAGGAGAGACAGCAGCTACCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS TCA 72 bp | AAGTCTTCAGGGGAGCCCAGATCACACTTCATGATGTaGAGACAGAGTTCCTCCAGAGGGACGCGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: KSSGEPRSHFMM*RQSSSRGTRRI Trigger: GATCCTGCGCGTCCCTCTGGAGGAACTCTGTCTTCACATCATGAAGTGTGATCTGGGCTCCCCTGAAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | CCAATTTTGACATTGACAGGCAAAGCGGCAAGGTGCTaGCCCAGCGGTGTCAGTTTAGGCTCATTGGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: PILTLTGKAARC*PSGVSLGSLGS Trigger: CGAACCCAATGAGCCTAAACTGACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | TTGCCAATTTTGACATTGACAGGCAAAGCGGCAAGGTaGTGGCCCAGCGGTGTCAGTTTAGGCTCATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPILTLTGKAAR*WPSGVSLGSLG Trigger: ACCCAATGAGCCTAAACTGACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | TTCTTCGGGGCTGGGTGCAGACTATGTTACACTTCCTaGCTCCACACTCATCGAGCAGCAGATCTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: FFGAGCRLCYTS*LHTHRAADLPT Trigger: TGTTGGAAGATCTGCTGCTCGATGAGTGTGGAGCCAGGAAGTGTAACATAGTCTGCACCCAGCCCCGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | ATCCAGCCGTCCACAGACAGAAGCCGCTCTCGGTGCTaGACTTCTATGTCACCTCCAAAAAGCAAAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: IQPSTDRSRSRC*TSMSPPKSKTG Trigger: TCCAGTTTTGCTTTTTGGAGGTGACATAGAAGTCCAGCACCGAGAGCGGCTTCTGTCTGTGGACGGCTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 72 bp | ATGGCTCCGAAAATGAGCATCTTGCCAATTTTGACATaGACAGGCAAAGCGGCAAGGTGCTGGCCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: MAPKMSILPILT*TGKAARCWPSG Trigger: ACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGGAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 90 bp | TCGAGACAGCCAAATATGGCTCCGAAAATGAGCATCTTGCCAATTTaGACATTGACAGGCAAAGCGGCAAGGTGCTGGCCCAGCGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRQPNMAPKMSILPI*TLTGKAARCWPSGV Trigger: GACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGGAGCCATATTTGGCTGTCTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 90 bp | GCCACTGGTTCGAGACAGCCAAATATGGCTCCGAAAATGAGCATCTaGCCAATTTTGACATTGACAGGCAAAGCGGCAAGGTGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ATGSRQPNMAPKMSI*PILTLTGKAARCWP Trigger: GGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGGAGCCATATTTGGCTGTCTCGAACCAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 90 bp | CTCGGAGCCCCCTTTCTCGCTTTCAGGACGCTGCTGCTGCTGTTGTaGCTGCTGCTGCTTCAACTTATTCAAGAGCTTGGCAATAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LGAPFLAFRTLLLLL*LLLLQLIQELGNKK Trigger: CTTTTTATTGCCAAGCTCTTGAATAAGTTGAAGCAGCAGCAGCAACAACAGCAGCAGCAGCGTCCTGAAAGCGAGAAAGGGGGCTCCGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 72 bp | TGCCTCTTCAGAGTTTCCACAATTGAGTCCCGGTGTTaGAACACAGGTAGCTGCTGTCTCTCCTTCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLFRVSTIESRC*NTGSCCLSFRS Trigger: GCTCCTGAAGGAGAGACAGCAGCTACCTGTGTTCAAACACCGGGACTCAATTGTGGAAACTCTGAAGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 90 bp | CAGCCAAATATGGCTCCGAAAATGAGCATCTTGCCAATTTTGACATaGACAGGCAAAGCGGCAAGGTGCTGGCCCAGCGGTGTCAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: QPNMAPKMSILPILT*TGKAARCWPSGVSL Trigger: TAAACTGACACCGCTGGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGGAGCCATATTTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | GTATCTGCCTACGGCAACTTTCTCAAAGGAGGGGTTTaGACTCTTGGGAAGATTCTTCCTGACCCAGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: VSAYGNFLKGGV*TLGKILPDPVD Trigger: ATCGACTGGGTCAGGAAGAATCTTCCCAAGAGTCCAAACCCCTCCTTTGAGAAAGTTGCCGTAGGCAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 72 bp | CCAAATATGGCTCCGAAAATGAGCATCTTGCCAATTTaGACATTGACAGGCAAAGCGGCAAGGTGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PNMAPKMSILPI*TLTGKAARCWP Trigger: GGGCCAGCACCTTGCCGCTTTGCCTGTCAATGTCAAAATTGGCAAGATGCTCATTTTCGGAGCCATATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 90 bp | TCCTTTGCGTCCAGAAGTCTGGCTGCAAGGTTCAAGTACCTTTGGTaGGGGTCAAACTTTTCTTCTTCCTCTAAGCCTTTAGAGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SFASRSLAARFKYLW*GSNFSSSSKPLEPS Trigger: CGAGGGCTCTAAAGGCTTAGAGGAAGAAGAAAAGTTTGACCCCAACCAAAGGTACTTGAACCTTGCAGCCAGACTTCTGGACGCAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | CCTTTAGAGCCCTCGCCCTTCTCCTCTTCGTCCTGTTaGTCAGCATATCTCAAAATCCACTCCTTCATATTC | + |
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Preference number: 6 (lower is better) Translates to: PLEPSPFSSSSC*SAYLKIHSFIF Trigger: GAATATGAAGGAGTGGATTTTGAGATATGCTGAGCAACAGGACGAAGAGGAGAAGGGCGAGGGCTCTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038574.7 ENSMUST00000224176.2 |
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| CDS TCA 72 bp | CTGCAGAATCTCCTTCAGGATAACGAGCAGGAAATCTaGCTGGACACTTCTCTCATGGACCTCATCGACAAT | + |
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Preference number: 6 (lower is better) Translates to: LQNLLQDNEQEI*LDTSLMDLIDN Trigger: ATTGTCGATGAGGTCCATGAGAGAAGTGTCCAGTCAGATTTCCTGCTCGTTATCCTGAAGGAGATTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | CCAGAGATCGCTCCCCTGTCGCTGTTCTGCTTTTTATaGTCATTGATCACTCCGATAATCCTTTGCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: PEIAPLSLFCFL*SLITPIILCSS Trigger: ACTAGAGCAAAGGATTATCGGAGTGATCAATGAGCATAAAAAGCAGAACAGCGACAGGGGAGCGATCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038574.7 ENSMUST00000224176.2 |
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| CDS GCA 72 bp | GCGCTCATCAGAATCAAGTGTAGGTCAGAACGCTTCTaGAGAATCTCCTTCAGGATAACGAGCAGGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: ALIRIKCRSERF*RISFRITSRKS Trigger: AGATTTCCTGCTCGTTATCCTGAAGGAGATTCTGCAGAAGCGTTCTGACCTACACTTGATTCTGATGAGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | AGTGTCAACAGTGACGTTCTGTTTAGGAAGTTCCTCTaGCAATATGAGATCTCAGAGCGGAAGCCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SVNSDVLFRKFL*QYEISERKPPS Trigger: AGAAGGAGGCTTCCGCTCTGAGATCTCATATTGCCAGAGGAACTTCCTAAACAGAACGTCACTGTTGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CCA 72 bp | AGAATCTCCTTCAGGATAACGAGCAGGAAATCTGACTaGACACTTCTCTCATGGACCTCATCGACAATGACA | + |
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Preference number: 6 (lower is better) Translates to: RISFRITSRKSD*TLLSWTSSTMT Trigger: TGTCATTGTCGATGAGGTCCATGAGAGAAGTGTCCAGTCAGATTTCCTGCTCGTTATCCTGAAGGAGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS GCA 72 bp | GAAAATCCTGCAGCTTTCACCAATTTCATTAACTCCTaGTTCACATCCTCGAGTGTCAACAGTGACGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ENPAAFTNFINS*FTSSSVNSDVL Trigger: CAGAACGTCACTGTTGACACTCGAGGATGTGAAGCAGGAGTTAATGAAATTGGTGAAAGCTGCAGGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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| CDS CAA 72 bp | TCCAGAAGTCTGGCTGCAAGGTTCAAGTACCTTTGGTaGGGGTCAAACTTTTCTTCTTCCTCTAAGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SRSLAARFKYLW*GSNFSSSSKPL Trigger: TAAAGGCTTAGAGGAAGAAGAAAAGTTTGACCCCAACCAAAGGTACTTGAACCTTGCAGCCAGACTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038574.7 |
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