Pregenerated sensors for DHX16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024422Ensembl transcript IDs: ENSMUST00000025292.15, ENSMUST00000173967.2, ENSMUST00000174366.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAAAATAACCCGAAGTaGTGGCCTTTCTCACACGAACGTAGTCACCTTGGCAAGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SRSESASQCGKNNPK*WPFSHERSHLGKKS Trigger: TGACTTCTTGCCAAGGTGACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCGAGGCTGACTCGGAGCGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGATCCCCAGGCTTGTCCTCTaGATCTCAGGAACTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: APRAPPVVPAHPGLGAWIPRLVL*ISGTVV Trigger: GACCACAGTTCCTGAGATCCAGAGGACAAGCCTGGG...GATCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CCA 90 bp | ACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGACGGGCATTGTCGGCATaGACAACCTTATCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TLQEPLQLFPHIPGSAHGRALSA*TTLSLG Trigger: GCCCAAGGATAAGGTTGTCCATGCCGACAATGCCCG...TCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR CAA 90 bp | GCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTaGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: ARSQANFHTLQEPLQ*FPHIPGSAHGSELY Trigger: GTACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGTTTAGCAGAACCAGGTaGTCTCCACCAGGGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QANFHTLQEPLQLFPHIPFSRTR*SPPGRK Trigger: CTTCCTCCCTGGTGGAGACCACCTGGTTCTGCTAAA...CGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAATCCAGGAAGTCAAAGTaGATCAGGTCATGGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: AAASLCGSRSESASQCGKSRKSK*IRSWIP Trigger: AGGGATCCATGACCTGATGCACTTTGACTTCCTGGA...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAAGGACAACCTTATCCTTaGGCCGGTAGAAGATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: AAASLCGSRSESASQCGKGQPYP*AGRRWN Trigger: ATTCCATCTTCTACCGGCCCAAGGATAAGGTTGTCC...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAAGAGAGCAGCAGGGTCTCGTATaGAGGAGGGTCCAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: WSRQAHGRATSVAVVQREQQGLV*RRVQEV Trigger: GACTTCCTGGACCCTCCTCCATACGAGACCCTGCTG...CTCTCTTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTGGTCAGGATCTCTTCTaGACAGCTATACTTCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: SPWQEVKPTSTRSKSPSSGQDLF*TAILLG Trigger: TCCGAGAAGTATAGCTGTTCAGAAGAGATCCTGACC...ACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR CAA 90 bp | AAAATAACCCGAAGTGATGGCCTTTCTCACACGAACGTAGTCACCTaGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KITRSDGLSHTNVVT*ARSQANFHTLQEPL Trigger: GAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTAGCCACTCTCAGCCCACTGTGTGTACACATTTAGCAGAACCAGGTGGTATCCACAGGCAGCTCTaGCATCTTTCGACCAGACGT | + |
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Preference number: 2 (lower is better) Translates to: KSSHSQPTVCTHLAEPGGIHRQL*HLSTRR Trigger: ACGTCTGGTCGAAAGATGGCAGAGCTGCCTGTGGAT...ACCACCTGGTTCTGCTAAATGTGTACACACAGTGGGCTGAGAGTGGCTACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAGCTATACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGCAGCAGCACAACGTTaGCCAGGCTTGTCCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: EQLYFSEAKIILDNMGSTAAAQR*PGLSSG Trigger: TCCAGAGGACAAGCCTGGGCAACGTTGTGCTGCTGC...TGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTATAGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAGTGTGGTAAAAATAACCCGAAGTGATGGCCTTTCTCACACGAACGTAGTCCTCGGCGCATGGATCTaGACTGTACAAAGTTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RSVVKITRSDGLSHTNVVLGAWI*TVQSFH Trigger: ATGAAAACTTTGTACAGTTCAGATCCATGCGCCGAG...GACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTAGCAGCAGCACAACGTaGCCCAGGCTTGTCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGKKSSQLPHAPRAPPVVSSSTT*PRLVLW Trigger: CCAGAGGACAAGCCTGGGCAACGTTGTGCTGCTGCT...AACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTGTGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAACAAGAGCCCCTCCAGTaGTTCCCGCACATCCCGGGC | + |
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Preference number: 3 (lower is better) Translates to: LCGQDKLMVEQPAWLLFKQEPLQ*FPHIPG Trigger: GCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTG...TTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR TCA 72 bp | GCAGAACCAGGTGGTCTCCACCAGGGAGGAAGAAGTTaGCACGGGCATTGTCGGCATGGACAACCTTATCCT | + |
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Preference number: 3 (lower is better) Translates to: AEPGGLHQGGRS*HGHCRHGQPYP Trigger: AGGATAAGGTTGTCCATGCCGACAATGCCCGTGTCAACTTCTTCCTCCCTGGTGGAGACCACCTGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR GCA 72 bp | AGGGTCTCGTATGGAGGAGGGTCCAGGAAGTCAAAGTaGATCAGGTCATGGATCCCTAAGCTCTTTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RVSYGGGSRKSK*IRSWIPKLFSS Trigger: GCTGCTAAAGAGCTTAGGGATCCATGACCTGATGCACTTTGACTTCCTGGACCCTCCTCCATACGAGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR TCA 72 bp | GAGTCAGCCTCGCAGTGTGGTAAAAATAACCCGAAGTaGTGGCCTTTCTCACACGAACGTAGTCACCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ESASQCGKNNPK*WPFSHERSHLG Trigger: GCCAAGGTGACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCGAGGCTGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTAGCCACTCTCAGCCCACTGTGTGTACACATTTAGCAGAACCAGGTGGTAAGTTGACACGGGCATaGTCGGCATGGACAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: KSSHSQPTVCTHLAEPGGKLTRA*SAWTTL Trigger: TAAGGTTGTCCATGCCGACAATGCCCGTGTCAACTT...ACCACCTGGTTCTGCTAAATGTGTACACACAGTGGGCTGAGAGTGGCTACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | ACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGGCCTCCAGCTTCTCCTaGTCTCCGGCTGCCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TSTRSKSPSSCSRTSRARASSFS*SPAARY Trigger: GTACCGGGCAGCCGGAGAGCAGGAGAAGCTGGAGGC...CCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTGGAGCTCCCGGATCTTaGAGCCCAGCCTGCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSSCSRTSRARRMDLNCGAPGS*SPACGS Trigger: GCTGCCGCAGGCTGGGCTCCAAGATCCGGGAGCTCC...ACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAAAGGAACTGCGCGACGTaGCGCTCGCTCAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAASLCGSRSESASQCGKRNCAT*RSLSPS Trigger: GCTGGGGCTGAGCGAGCGGCACGTCGCGCAGTTCCT...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | CAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGTGTCCCGCAGGCGCTaGACGAACTCCTCGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QANFHTLQEPLQLFPHIPVSRRR*TNSSAE Trigger: CTCCGCCGAGGAGTTCGTGCAGCGCCTGCGGGACAC...CGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | TCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTCCTCCCAGCGCCGCTaGTCCTCTCCCGGCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: SPWQEVKPTSTRSKSPSSSSQRR*SSPGAP Trigger: GGGTGCGCCGGGAGAGGAGCAGCGGCGCTGGGAGGA...ACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | ACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGGCAGGTTGGCATAAATaGGCAGCACCAGGAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TSTRSKSPSSCSRTSRARAGWHK*AAPGAP Trigger: GGGAGCTCCTGGTGCTGCCCATTTATGCCAACCTGC...CCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | AGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTGTGTGGGCTGGAAGATaGGAGCCTGCATGTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPSSCSRTSRARRMDLNCVWAGR*EPACLR Trigger: CCTCAGACATGCAGGCTCGCATCTTCCAGCCCACAC...ACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | CTTCTAGCTCCTTGGCCTTATAGTAGTGGGGAGCCACTTCCAAAAGCCAGCTGCGATGCAGCACCCAGCTaGGCCTCCTCCCAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLAPWPYSSGEPLPKASCDAAPS*ASSQRR Trigger: GCGGCGCTGGGAGGAGGCCCAGCTGGGTGCTGCATC...GCAGCTGGCTTTTGGAAGTGGCTCCCCACTACTATAAGGCCAAGGAGCTAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | TGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTACAAAGTTTTCACTCCTGCTCTCCGGCTaGCCGGTACTCCCGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSRTSRARRMDLNCTKFSLLLSG*PVLPSQ Trigger: CTGGCTCGGGAGTACCGGGCAGCCGGAGAGCAGGAG...TGAAAACTTTGTACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTCGTATGGAGGAGGGTCCAGGAAGTCAAAGTGCATCAGGTCATGGATCCGGGCCACTCGGGCTaGCACACTCATAGCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QGLVWRRVQEVKVHQVMDPGHSG*HTHSRH Trigger: GTGGCGGCTATGAGTGTGGCAGCCCGAGTGGCCCGG...ATCCATGACCTGATGCACTTTGACTTCCTGGACCCTCCTCCATACGAGACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCACTGCGGCAGCGGTCCTaGAGCATCTCACAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SHLGKKSSQLPHAPRAPPLRQRS*SISQAA Trigger: GGCTGCCTGTGAGATGCTCCAGGACCGCTGCCGCAG...TGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR TCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAAGCGAGCCTGCATGTCTaGGGGCAGGTTGGCATAAAT | + |
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Preference number: 4 (lower is better) Translates to: AAASLCGSRSESASQCGKASLHV*GQVGIN Trigger: ATTTATGCCAACCTGCCCTCAGACATGCAGGCTCGC...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | TGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTACAAAGTTTTCACGCAGCGCTGTGCGGTaGCGATCAGGAACTGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: CSRTSRARRMDLNCTKFSRSAVR*RSGTAR Trigger: TCGCGCAGTTCCTGATCGGCACCGCACAGCGCTGCG...TGAAAACTTTGTACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAACACGGACAAACTCGATaGTCTCGTCCTCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AAASLCGSRSESASQCGKHGQTR*SRPPPA Trigger: TGCTGGAGGAGGACGAGACCATCGAGTTTGTCCGTG...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR TCA 90 bp | CTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTAGCCCGCTGATTGGCTaGAGCCTTGCTGCAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LGKKSSQLPHAPRAPPVVSPLIG*SLAAGG Trigger: ACCCCCTGCAGCAAGGCTTCAGCCAATCAGCGGGCT...AACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | ACGGGCATTGTCGGCATGGACAACCTTATCCTTGGGCCGGTAGAAGATGGAATTAGCCCCAGCACCGAGTaGAGCTCCTCCTGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: TGIVGMDNLILGPVEDGISPSTE*SSSCTH Trigger: GTGGGTGCAGGAGGAGCTGCACTCGGTGCTGGGGCT...AATTCCATCTTCTACCGGCCCAAGGATAAGGTTGTCCATGCCGACAATGCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | AATAAACACTGTCTGCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGGTCCTTGTCCCGTTaGCGAACCCGCTCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NKHCLLLLHCAVAAPSQPRSLSR*RTRSAK Trigger: CTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCG...AGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGCAGACAGTGTTTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGGGGGCTGGGTCACGTaGATCTGCAGCACAGACACA | + |
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Preference number: 4 (lower is better) Translates to: SHLGKKSSQLPHAPRAPPGGWVT*ICSTDT Trigger: TGTGTCTGTGCTGCAGATCCACGTGACCCAGCCCCC...TGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | CTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTTGGTACTTGGCCTCCTaGGCAGCAGCATCTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGKKSSQLPHAPRAPPVVWYLAS*AAASRA Trigger: AGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCA...AACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR GCA 90 bp | ACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGATGCAAGCAATCTTCATaGCCTTCTTTGTGTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: TLQEPLQLFPHIPGSAHGCKQSS*PSLCNP Trigger: AGGGTTACACAAAGAAGGGCATGAAGATTGCTTGCA...TCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCACACCACAGCCTTCCGTaGCACCTTGCTCCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SHLGKKSSQLPHAPRAPPHHSLP*HLAPEL Trigger: AAGCTCTGGAGCAAGGTGCCACGGAAGGCTGTGGTG...TGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCACTGTGTGTACACATTTAGCAGAACCAGGTGGTCTCCACCAGGGAGGACTCAGCTGCCCGAGCTaGCTTTTCCACCACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QPTVCTHLAEPGGLHQGGLSCPS*LFHHSL Trigger: AAGGCTGTGGTGGAAAAGCCAGCTCGGGCAGCTGAG...TCCTCCCTGGTGGAGACCACCTGGTTCTGCTAAATGTGTACACACAGTGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | GCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCGCAGTGTGGTAAACTCAAAGAGGTACTGTaGGATCTGTGTGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AAASLCGSRSESASQCGKLKEVL*DLCGLP Trigger: GGGAAGACCACACAGATCCCACAGTACCTCTTTGAG...TTTACCACACTGCGAGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGGGCAGTATCCAGTGTaGCTGAAGCCACCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: SHLGKKSSQLPHAPRAPPGQYPV*LKPPGP Trigger: AGGTCCTGGTGGCTTCAGCCACACTGGATACTGCCC...TGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CCA 90 bp | CAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGCTGCTTGCAGAACCCTaGGTCCAGCACATAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: QANFHTLQEPLQLFPHIPLLAEP*VQHIDD Trigger: ATCATCTATGTGCTGGACCCAGGGTTCTGCAAGCAG...CGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR TCA 90 bp | AATAAACACTGTCTGCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCTTCCTCAGCCATCTTaGGGCGCTTCTGAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKHCLLLLHCAVAAPSQPLPQPS*GASEPL Trigger: AAGAGGCTCAGAAGCGCCTCAAGATGGCTGAGGAAG...AGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGCAGACAGTGTTTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR TCA 90 bp | TCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTAGTATCCAGTGTGGCTaGAGCCACCAGGACCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SPWQEVKPTSTRSKSPSSSIQCG*SHQDLE Trigger: CTCAAGGTCCTGGTGGCTTCAGCCACACTGGATACT...ACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR TCA 90 bp | CTTCTAGCTCCTTGGCCTTATAGTAGTGGGGAGCCACTTCCAAAAGCCAGCTGCTGCGTCCAGGGATTCTaGAGACAGGGGCGTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAPWPYSSGEPLPKASCCVQGF*RQGRHR Trigger: TCGATGACGCCCCTGTCTTCAGAATCCCTGGACGCA...GCAGCTGGCTTTTGGAAGTGGCTCCCCACTACTATAAGGCCAAGGAGCTAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | TACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGGCAGCTCTGTGCCGATCAGGAACTaGGCGACGTGCCGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSEAKIILDNMGSTGSSVPIRN*ATCRSL Trigger: GAGCGAGCGGCACGTCGCGCAGTTCCTGATCGGCAC...AGAGCTGCCTGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAATCTTGGAGCCCAGCCTaGGGCAGCGGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCGQDKLMVEQPAWLLFKSWSPA*GSGPGA Trigger: TGCTCCAGGACCGCTGCCGCAGGCTGGGCTCCAAGA...TTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAGGCAGCTCTGCCATCTTTCGACCAGACGTGGTGAGTTCTCCAAGGTGGTCCTCCTCGTCCTCCTaGTGTTTCTTCCTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STGSSAIFRPDVVSSPRWSSSSS*CFFLRC Trigger: ACACCTCAGGAAGAAACACCAGGAGGACGAGGAGGA...CCACCTTGGAGAACTCACCACGTCTGGTCGAAAGATGGCAGAGCTGCCTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCTCGTATGGAGGAGGGTCCAGGAAGTCAAAGTGCATCAGGTCATGGATATAGATTCCTTCTGCTaGGCCTGGGCTGACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLVWRRVQEVKVHQVMDIDSFC*AWADRG Trigger: GCCCCTGTCAGCCCAGGCCCAGCAGAAGGAATCTAT...ATCCATGACCTGATGCACTTTGACTTCCTGGACCCTCCTCCATACGAGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGATCTGAACTGTACAAAGTTCCTGGTGTTTCTTCCTaGGGTGTTTCCGTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFPHIPGSAHGSELYKVPGVSS*GVSVSS Trigger: GGAAGAGACGGAAACACCTCAGGAAGAAACACCAGG...AACTTTGTACAGTTCAGATCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGCAAGGTTTGGTCCATGTCACTCTCTAGCCCAGCTCTTCTCGTGTCTTCTCTCCGGGGCTGGGTaGAAGCAATCTTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAARFGPCHSLAQLFSCLLSGAG*KQSSCP Trigger: AGGGCATGAAGATTGCTTGCACCCAGCCCCGGAGAG...AAGACACGAGAAGAGCTGGGCTAGAGAGTGACATGGACCAAACCTTGCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCACTGTGTGTACACATTTAGCAGAACCAGGTGGTCTCCACCAGGGAGGATGTAGCTCTTCTGCTTaGAGAACCCTGGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPTVCTHLAEPGGLHQGGCSSSA*RTLGPA Trigger: TGCTGGACCCAGGGTTCTGCAAGCAGAAGAGCTACA...TCCTCCCTGGTGGAGACCACCTGGTTCTGCTAAATGTGTACACACAGTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | AATAAACACTGTCTGCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCTCTCTTCCGCTTCTTCTaGAGGCTGCTCCCGTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: NKHCLLLLHCAVAAPSQPLFRFF*RLLPLL Trigger: TAGTAACGGGAGCAGCCTCCAGAAGAAGCGGAAGAG...AGGCTGACTCGGAGCGGCTACCGCACAGTGAAGCAGCAGCAGACAGTGTTTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGGGTCCAGGAAGTCAAAGTGCATCAGGTCATGGATCCCTAAGCTCTTTTTCCCATTCATCCTCTaGGGCTGGCTTCTCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGSRKSKCIRSWIPKLFFPFIL*GWLLLR Trigger: ACGGAGGAGAAGCCAGCCTCAGAGGATGAATGGGAA...AAAGAGCTTAGGGATCCATGACCTGATGCACTTTGACTTCCTGGACCCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGCAAGGTTTGGTCCATGTCACTCTCTAGCCCAGCTCTTCTCGTGTCTTTGGATAGATTCCTTCTaGTGGGCCTGGGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAARFGPCHSLAQLFSCLWIDSF*WAWADR Trigger: CCTGTCAGCCCAGGCCCAGCAGAAGGAATCTATCCA...AAGACACGAGAAGAGCTGGGCTAGAGAGTGACATGGACCAAACCTTGCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTCACCACACTGTAACTTaGAAGGTCAGGCTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPWQEVKPTSTRSKSPSSHHTVT*KVRLRE Trigger: CTCTCTGAGCCTGACCTTGCAAGTTACAGTGTGGTG...ACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGGCAGCTCTTCCTCCAGCACCAGCTaGTACTTGGCCTCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSEAKIILDNMGSTGSSSSSTS*YLASCA Trigger: TGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGA...AGAGCTGCCTGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAAGAGAGTGCCTTCCTCTTCCCTaGCTCGGAAACCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSRQAHGRATSVAVVQRECLPLP*LGNLFL Trigger: GAGGAAGAGGTTTCCGAGTCAGGGAAGAGGAAGGCA...CTCTCTTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAAGAGAGGAGAACAGTTCGCTCTaGGGTGCAGTCCTCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: WSRQAHGRATSVAVVQREENSSL*GAVLKP Trigger: CGGTTTGAGGACTGCACCTCAGAGCGAACTGTTCTC...CTCTCTTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGCTATACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGGCCTCTCGCTCAGCTaGCCGAGCTGGCTTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQLYFSEAKIILDNMGSTGLSLS*PSWLFH Trigger: GTGGAAAAGCCAGCTCGGGCAGCTGAGCGAGAGGCC...TGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTATAGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGTGTGGTAAAAATAACCCGAAGTGATGGCCTTTCTCACACGAACGTAGTCGCCACTCTCCGGGGCTaGGTGCAAGCAATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVVKITRSDGLSHTNVVATLRG*VQAIFM Trigger: CATGAAGATTGCTTGCACCCAGCCCCGGAGAGTGGC...GACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR GCA 90 bp | TACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGGCAGCTCTCAGTTCGCTCTGAGGTaGAGTCCTCAAACCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSEAKIILDNMGSTGSSQFALR*SPQTGC Trigger: GCATCCGGTTTGAGGACTGCACCTCAGAGCGAACTG...AGAGCTGCCTGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| 3UTR CAA 72 bp | CGAAGTGATGGCCTTTCTCACACGAACGTAGTCACCTaGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSDGLSHTNVVT*ARSQANFHTLQ Trigger: TTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACTACGTTCGTGTGAGAAAGGCCATCACTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGTGTGGTAAAAATAACCCGAAGTGATGGCCTTTCTCACACGAACGTAGTCACTGTGGGATCTGTGTaGTCTTCCCAGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVVKITRSDGLSHTNVVTVGSV*SSQSQS Trigger: AGACTGGCTCTGGGAAGACCACACAGATCCCACAGT...GACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCTCCTTGGCCTTATAGTAGTGGGGAGCCACTTCCAAAAGCCAGCTGCATAGAAGATGTCAACTaGAAACCTGCGTCCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAPWPYSSGEPLPKASCIEDVN*KPASRD Trigger: ATCCCTGGACGCAGGTTTCCAGTTGACATCTTCTAT...GCAGCTGGCTTTTGGAAGTGGCTCCCCACTACTATAAGGCCAAGGAGCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR TCA 90 bp | CGCAGTGTGGTAAAAATAACCCGAAGTGATGGCCTTTCTCACACGAACGTAGTCATAGGCCTTCTTATCTaGCCGTTCCAGGACATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSVVKITRSDGLSHTNVVIGLLI*PFQDIP Trigger: CGGAATGTCCTGGAACGGTCAGATAAGAAGGCCTAT...GACTACGTTCGTGTGAGAAAGGCCATCACTTCGGGTTATTTTTACCACACTGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGGCTGTTGTTCAAACAGGTAGTCAGCCTCTaGGGCCTTGGTATAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCGQDKLMVEQPAWLLFKQVVSL*GLGIED Trigger: ATCTTCTATACCAAGGCCCCAGAGGCTGACTACCTG...TTTGAACAACAGCCACGCTGGTTGCTCTACCATGAGCTTGTCTTGACCACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| 3UTR CAA 72 bp | CATGGATCTGAACTGTACAAAGTTTTCATAGCACCATaGGGAAGAGTAGCCACTCTCAGCCCACTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HGSELYKVFIAP*GRVATLSPLCV Trigger: TACACACAGTGGGCTGAGAGTGGCTACTCTTCCCAATGGTGCTATGAAAACTTTGTACAGTTCAGATCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | GCGGAGGCGCAGCGCTGTGCGGTGCCGATCAGGAACTGCGCGACGTaGCGCTCGCTCAGCCCCAGCACCGAGTGCAGCTCCTCCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AEAQRCAVPIRNCAT*RSLSPSTECSSSCT Trigger: GGTGCAGGAGGAGCTGCACTCGGTGCTGGGGCTGAGCGAGCGGCACGTCGCGCAGTTCCTGATCGGCACCGCACAGCGCTGCGCCTCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | GGGAACACGGGCAGGCTGCGGCGCACAGCCTGGATAGATTCCTTCTaGTGGGCCTGGGCTGACAGGGGCGGGCCTGACGGCTCCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GNTGRLRRTAWIDSF*WAWADRGGPDGSSS Trigger: TGACGAGGAGCCGTCAGGCCCGCCCCTGTCAGCCCAGGCCCAGCAGAAGGAATCTATCCAGGCTGTGCGCCGCAGCCTGCCCGTGTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | GGCAGGCTGCGGCGCACAGCCTGGATAGATTCCTTCTGCTGGGCCTaGGCTGACAGGGGCGGGCCTGACGGCTCCTCGTCACCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLRRTAWIDSFCWA*ADRGGPDGSSSPWS Trigger: ACTCCAGGGTGACGAGGAGCCGTCAGGCCCGCCCCTGTCAGCCCAGGCCCAGCAGAAGGAATCTATCCAGGCTGTGCGCCGCAGCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | AGCTCCTCTCGGAAGGGGAACACGGGCAGGCTGCGGCGCACAGCCTaGATAGATTCCTTCTGCTGGGCCTGGGCTGACAGGGGCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSRKGNTGRLRRTA*IDSFCWAWADRGGP Trigger: AGGCCCGCCCCTGTCAGCCCAGGCCCAGCAGAAGGAATCTATCCAGGCTGTGCGCCGCAGCCTGCCCGTGTTCCCCTTCCGAGAGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | ACCAGGAGCTCCCGGATCTTGGAGCCCAGCCTGCGGCAGCGGTCCTaGAGCATCTCACAGGCAGCCTCAATCTCCTCCTGTCCCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRSSRILEPSLRQRS*SISQAASISSCPVR Trigger: CCTGACGGGACAGGAGGAGATTGAGGCTGCCTGTGAGATGCTCCAGGACCGCTGCCGCAGGCTGGGCTCCAAGATCCGGGAGCTCCTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS TCA 90 bp | CTGCCCGGTACTCCCGAGCCAGGTCCCGCACACGTCGCTTGTACTTaGGCTCCCTGCGCTCATGGCGACTCAGCTCCACGTCCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LPGTPEPGPAHVACT*APCAHGDSAPRPQT Trigger: TGTTTGGGGACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | CACCTCGTTCCCAAGCTTCACACCCATCTCCCGGGCCACTCGGGCTaGCACACTCATAGCCGCCACTCTCCGGGGCTGGGTGCAAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HLVPKLHTHLPGHSG*HTHSRHSPGLGASN Trigger: ATTGCTTGCACCCAGCCCCGGAGAGTGGCGGCTATGAGTGTGGCAGCCCGAGTGGCCCGGGAGATGGGTGTGAAGCTTGGGAACGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | GCCAGGTCCCGCACACGTCGCTTGTACTTGAGCTCCCTGCGCTCATaGCGACTCAGCTCCACGTCCCCAAACAGGACCTCCTCATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSRTRRLYLSSLRS*RLSSTSPNRTSSSA Trigger: GGCTGATGAGGAGGTCCTGTTTGGGGACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | GCTGGAAGATGCGAGCCTGCATGTCTGAGGGCAGGTTGGCATAAATaGGCAGCACCAGGAGCTCCCGGATCTTGGAGCCCAGCCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGRCEPACLRAGWHK*AAPGAPGSWSPACG Trigger: GCCGCAGGCTGGGCTCCAAGATCCGGGAGCTCCTGGTGCTGCCCATTTATGCCAACCTGCCCTCAGACATGCAGGCTCGCATCTTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | CAGGACATTCCGGGTCCGGTCCTTGTCCCGTTGCCGAACCCGCTCTaGAAAGGCATCCCGTTCTTCCAAGTCCTGGAGACGCTCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QDIPGPVLVPLPNPL*KGIPFFQVLETLTL Trigger: GAGCGTGAGCGTCTCCAGGACTTGGAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGGAATGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | CATGTGGTAGCGATTAGTGGCCTCCAGCTTCTCCTGCTCTCCGGCTaGCCGGTACTCCCGAGCCAGGTCCCGCACACGTCGCTTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: HVVAISGLQLLLLSG*PVLPSQVPHTSLVL Trigger: AAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGCAGCCGGAGAGCAGGAGAAGCTGGAGGCCACTAATCGCTACCACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | TCGATGGTCTCGTCCTCCTCCAGCACCAGCTGGTACTTGGCCTCCTaGGCAGCAGCATCTCGGGCTCCAAACTTCAGGGATGCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SMVSSSSSTSWYLAS*AAASRAPNFRDAAP Trigger: GGGTGCTGCATCCCTGAAGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS-3UTR CAA 90 bp | ACGCTCCAAGAGCCCCTCCAGTTGTTCCCGCACATCCCGGGCTCGGCGCATGGAGAAGCCACCAGGACCTaGAGCTCAGGTCGGAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLQEPLQLFPHIPGSAHGEATRT*SSGRNL Trigger: TAGATTCCGACCTGAGCTCAAGGTCCTGGTGGCTTC...TCCATGCGCCGAGCCCGGGATGTGCGGGAACAACTGGAGGGGCTCTTGGAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | GCAGCACGGACAAACTCGATGGTCTCGTCCTCCTCCAGCACCAGCTaGTACTTGGCCTCCTGCGCAGCAGCATCTCGGGCTCCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AARTNSMVSSSSSTS*YLASCAAASRAPNF Trigger: GAAGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGAGTTTGTCCGTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | GGACAAACTCGATGGTCTCGTCCTCCTCCAGCACCAGCTGGTACTTaGCCTCCTGCGCAGCAGCATCTCGGGCTCCAAACTTCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GQTRWSRPPPAPAGT*PPAQQHLGLQTSGM Trigger: CATCCCTGAAGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGAGTTTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS TCA 90 bp | TGTGTGGTCTTCCCAGAGCCAGTCTCGCCTTCGATGATGAGGACCTaGTGGTTGGCAATGGCGGCCAGAAGCTCCTCTCGGAAGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVVFPEPVSPSMMRT*WLAMAARSSSRKGN Trigger: GTTCCCCTTCCGAGAGGAGCTTCTGGCCGCCATTGCCAACCATCAGGTCCTCATCATCGAAGGCGAGACTGGCTCTGGGAAGACCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | TTATCTGACCGTTCCAGGACATTCCGGGTCCGGTCCTTGTCCCGTTaGCGAACCCGCTCTGCAAAGGCATCCCGTTCTTCCAAGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDRSRTFRVRSLSR*RTRSAKASRSSKSW Trigger: CCAGGACTTGGAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGGAATGTCCTGGAACGGTCAGATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | TCCTGGTGTTTCTTCCTGAGGTGTTTCCGTCTCTTCCGCTTCTTCTaGAGGCTGCTCCCGTTACTACCCACTGCCTCCTCGCCGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SWCFFLRCFRLFRFF*RLLPLLPTASSPLS Trigger: CGAGAGCGGCGAGGAGGCAGTGGGTAGTAACGGGAGCAGCCTCCAGAAGAAGCGGAAGAGACGGAAACACCTCAGGAAGAAACACCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS CCA 90 bp | CGTTGCCGAACCCGCTCTGCAAAGGCATCCCGTTCTTCCAAGTCCTaGAGACGCTCACGCTCCGTCCTTTCCCATTCATCCTCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRTRSAKASRSSKS*RRSRSVLSHSSSEA Trigger: AGCCTCAGAGGATGAATGGGAAAGGACGGAGCGTGAGCGTCTCCAGGACTTGGAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTCCAGTTGTTGCCTTCCGTGGCACCTaGCTCCAGAGCTTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGKKSSQLPHAPRAPPVVAFRGT*LQSFRA Trigger: CGCCCTGAAGCTCTGGAGCAAGGTGCCACGGAAGGC...AACAACTGGAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
||
| CDS GCA 90 bp | CCGTCTCTTCCGCTTCTTCTGGAGGCTGCTCCCGTTACTACCCACTaGCTCCTCGCCGCTCTCGCTGTCTTCCAACAACTTATAAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPLLLEAAPVTTH*LLAALAVFQQLIRT Trigger: CGTTCTTATAAGTTGTTGGAAGACAGCGAGAGCGGCGAGGAGGCAGTGGGTAGTAACGGGAGCAGCCTCCAGAAGAAGCGGAAGAGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGTAGCCACTCTCAGCCCACTGTGTGTACACATTTAGCAGAACCAGGTGGTCCGGTCCTTGTCCCGTaGCCGAACCCGCTCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KSSHSQPTVCTHLAEPGGPVLVP*PNPLCK Trigger: TTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGG...ACCACCTGGTTCTGCTAAATGTGTACACACAGTGGGCTGAGAGTGGCTACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS-3UTR CAA 90 bp | TCCACAGGCAGCTCTGCCATCTTTCGACCAGACGTGGTGAGTTCTCCAAGGTGGTCACCACACTGTAACTaGCAAGGTCAGGCTCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: STGSSAIFRPDVVSSPRWSPHCN*QGQAQR Trigger: TCTCTGAGCCTGACCTTGCAAGTTACAGTGTGGTGA...CCACCTTGGAGAACTCACCACGTCTGGTCGAAAGATGGCAGAGCTGCCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS TCA 90 bp | TACGGAGCTCAGGGACCATGGCTTTCCGATCTTCCTCAGCCATCTTaGGGCGCTTCTGAGCCTCTTCATAGGCCTTCTTATCTGACCGTT | + |
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Preference number: 5 (lower is better) Translates to: YGAQGPWLSDLPQPS*GASEPLHRPSYLTV Trigger: AACGGTCAGATAAGAAGGCCTATGAAGAGGCTCAGAAGCGCCTCAAGATGGCTGAGGAAGATCGGAAAGCCATGGTCCCTGAGCTCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 90 bp | CTCCATTCCCGTACGAGGGTTGTAGCTCTTCTGCTTGCAGAACCCTaGGTCCAGCACATAGATGATGCCTTCGATGGTGAGGGAAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LHSRTRVVALLLAEP*VQHIDDAFDGEGSF Trigger: GAAACTTCCCTCACCATCGAAGGCATCATCTATGTGCTGGACCCAGGGTTCTGCAAGCAGAAGAGCTACAACCCTCGTACGGGAATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS-3UTR CAA 90 bp | TACTTCTCGGAGGCCAAGATCATTTTAGACAACATGGGATCCACAGGCAGCTCTCTCGTCACCCTGGAGTaGAGCAGCACGGACAAACTC | + |
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Preference number: 5 (lower is better) Translates to: YFSEAKIILDNMGSTGSSLVTLE*SSTDKL Trigger: GAGTTTGTCCGTGCTGCTCAACTCCAGGGTGACGAG...AGAGCTGCCTGTGGATCCCATGTTGTCTAAAATGATCTTGGCCTCCGAGAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS GCA 90 bp | GCTCCTTGGCCTTATAGTAGTGGGGAGCCACTTCCAAAAGCCAGCTaGTTTCAATCTCCAGTACCTTTCTCACACGAACGTAGTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: APWPYSSGEPLPKAS*FQSPVPFSHERSHL Trigger: AAGGTGACTACGTTCGTGTGAGAAAGGTACTGGAGATTGAAAGCAGCTGGCTTTTGGAAGTGGCTCCCCACTACTATAAGGCCAAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173967.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGCAAGGTTTGGTCCATGTCACTCTCTAGCCCAGCTCTTCTCGTGTCTTAATCTAGCGACGTCTTaGATCAATCCAAAGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: RAARFGPCHSLAQLFSCLNLATS*INPKRM Trigger: CATTCTCTTTGGATTGATCAAAGACGTCGCTAGATT...AAGACACGAGAAGAGCTGGGCTAGAGAGTGACATGGACCAAACCTTGCAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CCCCCGAGGTCCAGGGTGTCGGTGTCCCGCAGGCGCTaGACGAACTCCTCGGCGGAGGCGCAGCGCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: PPRSRVSVSRRR*TNSSAEAQRCA Trigger: CGCACAGCGCTGCGCCTCCGCCGAGGAGTTCGTGCAGCGCCTGCGGGACACCGACACCCTGGACCTCGGGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | GCGGAGGCGCAGCGCTGTGCGGTGCCGATCAGGAACTaGGCGACGTGCCGCTCGCTCAGCCCCAGCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: AEAQRCAVPIRN*ATCRSLSPSTE Trigger: CTCGGTGCTGGGGCTGAGCGAGCGGCACGTCGCGCAGTTCCTGATCGGCACCGCACAGCGCTGCGCCTCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CAGCGCTGTGCGGTGCCGATCAGGAACTGCGCGACGTaGCGCTCGCTCAGCCCCAGCACCGAGTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QRCAVPIRNCAT*RSLSPSTECSS Trigger: GGAGCTGCACTCGGTGCTGGGGCTGAGCGAGCGGCACGTCGCGCAGTTCCTGATCGGCACCGCACAGCGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | GCGATTAGTGGCCTCCAGCTTCTCCTGCTCTCCGGCTaGCCGGTACTCCCGAGCCAGGTCCCGCACACGTCG | + |
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Preference number: 6 (lower is better) Translates to: AISGLQLLLLSG*PVLPSQVPHTS Trigger: CGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGCAGCCGGAGAGCAGGAGAAGCTGGAGGCCACTAATCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CCCAAGCTTCACACCCATCTCCCGGGCCACTCGGGCTaGCACACTCATAGCCGCCACTCTCCGGGGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PKLHTHLPGHSG*HTHSRHSPGLG Trigger: ACCCAGCCCCGGAGAGTGGCGGCTATGAGTGTGGCAGCCCGAGTGGCCCGGGAGATGGGTGTGAAGCTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 90 bp | TCTCCGGCTGCCCGGTACTCCCGAGCCAGGTCCCGCACACGTCGCTaGTACTTGAGCTCCCTGCGCTCATGGCGACTCAGCTCCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SPAARYSRARSRTRR*YLSSLRSWRLSSTS Trigger: GGACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGCAGCCGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | CGGAAGGGGAACACGGGCAGGCTGCGGCGCACAGCCTaGATAGATTCCTTCTGCTGGGCCTGGGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RKGNTGRLRRTA*IDSFCWAWADR Trigger: CCTGTCAGCCCAGGCCCAGCAGAAGGAATCTATCCAGGCTGTGCGCCGCAGCCTGCCCGTGTTCCCCTTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | GCCCGGTACTCCCGAGCCAGGTCCCGCACACGTCGCTaGTACTTGAGCTCCCTGCGCTCATGGCGACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARYSRARSRTRR*YLSSLRSWRLS Trigger: GCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 90 bp | GCTGCCCGGTACTCCCGAGCCAGGTCCCGCACACGTCGCTTGTACTaGAGCTCCCTGCGCTCATGGCGACTCAGCTCCACGTCCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: AARYSRARSRTRRLY*SSLRSWRLSSTSPN Trigger: GTTTGGGGACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTACCGGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS TCA 72 bp | ACTCCCGAGCCAGGTCCCGCACACGTCGCTTGTACTTaGGCTCCCTGCGCTCATGGCGACTCAGCTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: TPEPGPAHVACT*APCAHGDSAPR Trigger: ACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CCGGGTCCGGTCCTTGTCCCGTTGCCGAACCCGCTCTaGAAAGGCATCCCGTTCTTCCAAGTCCTGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: PGPVLVPLPNPL*KGIPFFQVLET Trigger: CGTCTCCAGGACTTGGAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | TCCCGGATCTTGGAGCCCAGCCTGCGGCAGCGGTCCTaGAGCATCTCACAGGCAGCCTCAATCTCCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRILEPSLRQRS*SISQAASISSC Trigger: ACAGGAGGAGATTGAGGCTGCCTGTGAGATGCTCCAGGACCGCTGCCGCAGGCTGGGCTCCAAGATCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | TACTCCCGAGCCAGGTCCCGCACACGTCGCTTGTACTaGAGCTCCCTGCGCTCATGGCGACTCAGCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: YSRARSRTRRLY*SSLRSWRLSST Trigger: CGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCGGGACCTGGCTCGGGAGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CGTTCCAGGACATTCCGGGTCCGGTCCTTGTCCCGTTaGCGAACCCGCTCTGCAAAGGCATCCCGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSRTFRVRSLSR*RTRSAKASRSS Trigger: GGAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGGAATGTCCTGGAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | CGCACACGTCGCTTGTACTTGAGCTCCCTGCGCTCATaGCGACTCAGCTCCACGTCCCCAAACAGGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTRRLYLSSLRS*RLSSTSPNRTS Trigger: GGAGGTCCTGTTTGGGGACGTGGAGCTGAGTCGCCATGAGCGCAGGGAGCTCAAGTACAAGCGACGTGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | CGATGGTCTCGTCCTCCTCCAGCACCAGCTGGTACTTaGCCTCCTGCGCAGCAGCATCTCGGGCTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: RWSRPPPAPAGT*PPAQQHLGLQT Trigger: AGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | CCGTTCCAGGACATTCCGGGTCCGGTCCTTGTCCCGTaGCCGAACCCGCTCTGCAAAGGCATCCCGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PFQDIPGPVLVP*PNPLCKGIPFF Trigger: GAAGAACGGGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGGAATGTCCTGGAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | TCGATGGTCTCGTCCTCCTCCAGCACCAGCTGGTACTaGGCCTCCTGCGCAGCAGCATCTCGGGCTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SMVSSSSSTSWY*ASCAAASRAPN Trigger: GTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | TCGTCCTCCTCCAGCACCAGCTGGTACTTGGCCTCCTaGGCAGCAGCATCTCGGGCTCCAAACTTCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSTSWYLAS*AAASRAPNFRD Trigger: ATCCCTGAAGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | ACAAACTCGATGGTCTCGTCCTCCTCCAGCACCAGCTaGTACTTGGCCTCCTGCGCAGCAGCATCTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TNSMVSSSSSTS*YLASCAAASRA Trigger: AGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGAGTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 90 bp | CGGACAAACTCGATGGTCTCGTCCTCCTCCAGCACCAGCTGGTACTaGGCCTCCTGCGCAGCAGCATCTCGGGCTCCAAACTTCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RTNSMVSSSSSTSWY*ASCAAASRAPNFRD Trigger: ATCCCTGAAGTTTGGAGCCCGAGATGCTGCTGCGCAGGAGGCCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGAGTTTGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS TCA 72 bp | TTCCCAGAGCCAGTCTCGCCTTCGATGATGAGGACCTaGTGGTTGGCAATGGCGGCCAGAAGCTCCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FPEPVSPSMMRT*WLAMAARSSSR Trigger: CCGAGAGGAGCTTCTGGCCGCCATTGCCAACCATCAGGTCCTCATCATCGAAGGCGAGACTGGCTCTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CCGCTTCTTCTGGAGGCTGCTCCCGTTACTACCCACTaGCTCCTCGCCGCTCTCGCTGTCTTCCAACAACTT | + |
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Preference number: 6 (lower is better) Translates to: PLLLEAAPVTTH*LLAALAVFQQL Trigger: AAGTTGTTGGAAGACAGCGAGAGCGGCGAGGAGGCAGTGGGTAGTAACGGGAGCAGCCTCCAGAAGAAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | CGTCACCCTGGAGTTGAGCAGCACGGACAAACTCGATaGTCTCGTCCTCCTCCAGCACCAGCTGGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: RHPGVEQHGQTR*SRPPPAPAGTW Trigger: CCAAGTACCAGCTGGTGCTGGAGGAGGACGAGACCATCGAGTTTGTCCGTGCTGCTCAACTCCAGGGTGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | TTATCTGACCGTTCCAGGACATTCCGGGTCCGGTCCTaGTCCCGTTGCCGAACCCGCTCTGCAAAGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LSDRSRTFRVRS*SRCRTRSAKAS Trigger: GGATGCCTTTGCAGAGCGGGTTCGGCAACGGGACAAGGACCGGACCCGGAATGTCCTGGAACGGTCAGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | ACCCGCTCTGCAAAGGCATCCCGTTCTTCCAAGTCCTaGAGACGCTCACGCTCCGTCCTTTCCCATTCATCC | + |
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Preference number: 6 (lower is better) Translates to: TRSAKASRSSKS*RRSRSVLSHSS Trigger: GGATGAATGGGAAAGGACGGAGCGTGAGCGTCTCCAGGACTTGGAAGAACGGGATGCCTTTGCAGAGCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | AGGAACACCAGTATATCTCCAGGGGGCTGGGTCACGTaGATCTGCAGCACAGACACAACGCAGGCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RNTSISPGGWVT*ICSTDTTQASR Trigger: CCTGGAAGCCTGCGTTGTGTCTGTGCTGCAGATCCACGTGACCCAGCCCCCTGGAGATATACTGGTGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | TGTCCCGTCAGGAACACCAGTATATCTCCAGGGGGCTaGGTCACGTGGATCTGCAGCACAGACACAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: CPVRNTSISPGG*VTWICSTDTTQ Trigger: CTGCGTTGTGTCTGTGCTGCAGATCCACGTGACCCAGCCCCCTGGAGATATACTGGTGTTCCTGACGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | TTCTTCCTGAGGTGTTTCCGTCTCTTCCGCTTCTTCTaGAGGCTGCTCCCGTTACTACCCACTGCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FFLRCFRLFRFF*RLLPLLPTASS Trigger: CGAGGAGGCAGTGGGTAGTAACGGGAGCAGCCTCCAGAAGAAGCGGAAGAGACGGAAACACCTCAGGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 72 bp | CGGGCAGTATCCAGTGTGGCTGAAGCCACCAGGACCTaGAGCTCAGGTCGGAATCTAGCGACGTCTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: RAVSSVAEATRT*SSGRNLATSLI Trigger: GATCAAAGACGTCGCTAGATTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACACTGGATACTGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS GCA 72 bp | CCGCCACTCTCCGGGGCTGGGTGCAAGCAATCTTCATaGCCTTCTTTGTGTAACCCTCCTCAAAGAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: PPLSGAGCKQSS*PSLCNPPQRGT Trigger: AGTACCTCTTTGAGGAGGGTTACACAAAGAAGGGCATGAAGATTGCTTGCACCCAGCCCCGGAGAGTGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | GTCAGCCTCTGGGGCCTTGGTATAGAAGATGTCAACTaGAAACCTGCGTCCAGGGATTCTGAAGACAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VSLWGLGIEDVN*KPASRDSEDRG Trigger: GCCCCTGTCTTCAGAATCCCTGGACGCAGGTTTCCAGTTGACATCTTCTATACCAAGGCCCCAGAGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CCA 72 bp | CGTACGAGGGTTGTAGCTCTTCTGCTTGCAGAACCCTaGGTCCAGCACATAGATGATGCCTTCGATGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTRVVALLLAEP*VQHIDDAFDGE Trigger: CTCACCATCGAAGGCATCATCTATGTGCTGGACCCAGGGTTCTGCAAGCAGAAGAGCTACAACCCTCGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 90 bp | GCAGAAAACCGGGCAGTATCCAGTGTGGCTGAAGCCACCAGGACCTaGAGCTCAGGTCGGAATCTAGCGACGTCTTTGATCAATCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AENRAVSSVAEATRT*SSGRNLATSLINPK Trigger: CTTTGGATTGATCAAAGACGTCGCTAGATTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACACTGGATACTGCCCGGTTTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS TCA 72 bp | CAGGGACCATGGCTTTCCGATCTTCCTCAGCCATCTTaGGGCGCTTCTGAGCCTCTTCATAGGCCTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: QGPWLSDLPQPS*GASEPLHRPSY Trigger: ATAAGAAGGCCTATGAAGAGGCTCAGAAGCGCCTCAAGATGGCTGAGGAAGATCGGAAAGCCATGGTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025292.15 ENSMUST00000174366.8 |
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| CDS CAA 90 bp | GCTGCTTTCAATCTCCAGTACCTTTCTCACACGAACGTAGTCACCTaGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAAGAGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAFNLQYLSHTNVVT*ARSQANFHTLQEPL Trigger: GAGGGGCTCTTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACTACGTTCGTGTGAGAAAGGTACTGGAGATTGAAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173967.2 |
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| CDS GCA 72 bp | CACATAGATGATGCCTTCGATGGTGAGGGAAGTTTCTaGAATGTTTGTTGCCACAACCACCTTTCGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HIDDAFDGEGSF*NVCCHNHLSGP Trigger: GGGGCCCGAAAGGTGGTTGTGGCAACAAACATTGCAGAAACTTCCCTCACCATCGAAGGCATCATCTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025292.15 |
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| CDS GCA 72 bp | CCTTATAGTAGTGGGGAGCCACTTCCAAAAGCCAGCTaGTTTCAATCTCCAGTACCTTTCTCACACGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: PYSSGEPLPKAS*FQSPVPFSHER Trigger: ACGTTCGTGTGAGAAAGGTACTGGAGATTGAAAGCAGCTGGCTTTTGGAAGTGGCTCCCCACTACTATAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173967.2 |
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| CDS CAA 72 bp | AATCTCCAGTACCTTTCTCACACGAACGTAGTCACCTaGGCAAGAAGTCAAGCCAACTTCCACACGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: NLQYLSHTNVVT*ARSQANFHTLQ Trigger: TTGGAGCGTGTGGAAGTTGGCTTGACTTCTTGCCAAGGTGACTACGTTCGTGTGAGAAAGGTACTGGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173967.2 |
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