Pregenerated sensors for DHX15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029169Ensembl transcript IDs: ENSMUST00000031061.12, ENSMUST00000195922.2, ENSMUST00000199321.5, ENSMUST00000200186.5
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CACCCATTCAGGCTTGTGATCAAGCACAGTAGAGGGATGCAACTGGACCACCTGCTGGCGTACATTGTCTaGAGACATCAGGGACCGGTA | + |
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Preference number: 2 (lower is better) Translates to: HPFRLVIKHSRGMQLDHLLAYIV*RHQGPV Trigger: TACCGGTCCCTGATGTCTGCAGACAATGTACGCCAG...CAGGTGGTCCAGTTGCATCCCTCTACTGTGCTTGATCACAAGCCTGAATGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATCGACTTTTCCAGTATaGGCTACAGTGTCAACACAA | + |
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Preference number: 2 (lower is better) Translates to: SASVWRQKIVSTEAQVVTSTFPV*ATVSTQ Trigger: TTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGA...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| 3UTR-3UTR GCA 90 bp | TTTCACCAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTAGCACAGTAGAGGGATaGAACTGGACCACCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FHQPFWLDICTCPDIILCSTVEG*NWTTWL Trigger: TAACCAGGTGGTCCAGTTGCATCCCTCTACTGTGCT...ACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTGGTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATATTCTTGATAGCTGCTaGCGTACATTGTCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: IVPACEISTSTRQIKSVHILDSC*RTLSAD Trigger: GTCTGCAGACAATGTACGCCAGCAGCTATCAAGAAT...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTCAATTACAACGATCATaGATACCATGGTCGATAATC | + |
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Preference number: 2 (lower is better) Translates to: EVSASVWRQKIVSTEAQVQLQRS*IPWSII Trigger: GATTATCGACCATGGTATGCATGATCGTTGTAATTG...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| 3UTR-3UTR GCA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGATAATTCTTGATAGCTaGTGGCGTACATTGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QPFWLDICTCPDIILCRQIILDS*WRTLSA Trigger: TGCAGACAATGTACGCCAGCAGCTATCAAGAATTAT...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGCTTGATATCTGCAACTGGACCACCTaGTTATCTTTCACAGTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: AHVIILRGNFHQPFWLDICNWTT*LSFTVK Trigger: TTTAACTGTGAAAGATAACCAGGTGGTCCAGTTGCA...GATATCAAGCCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGCTTGATATCTCTAAATGTGCCACTTaGATAAAATACCCAGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: AHVIILRGNFHQPFWLDISKCAT*IKYPVT Trigger: GGTTACTGGGTATTTTATGCAAGTGGCACATTTAGA...GATATCAAGCCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| 3UTR-3UTR TCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAAATAAAGGCCATTATTaGACCAACATGAAGAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRNKGHY*TNMKST Trigger: TGTGCTCTTCATGTTGGTTCAATAATGGCCTTTATT...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| 3UTR-3UTR CAA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGACATGAAGAGCACAACTaGAACTTGACTTCATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRHEEHN*NLTSFI Trigger: GATGAATGAAGTCAAGTTCAAGTTGTGCTCTTCATG...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | CACCCATTCAGGCTTGTGATCAAGCACAGTAGAGGGATGCAACTGGACCACCTGCATCTGCAGCTTTCTTaGCCTCCGTGGGGCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HPFRLVIKHSRGMQLDHLHLQLS*PPWGEQ Trigger: TTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATG...CAGGTGGTCCAGTTGCATCCCTCTACTGTGCTTGATCACAAGCCTGAATGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR GCA 90 bp | CACCCATTCAGGCTTGTGATCAAGCACAGTAGAGGGATGCAACTGGACCACCTGGTGGTGGCTCAAAAATaGGTTGTTGCTGCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPFRLVIKHSRGMQLDHLVVAQK*VVAAGV Trigger: CACCCCAGCAGCAACAACGCATTTTTGAGCCACCAC...CAGGTGGTCCAGTTGCATCCCTCTACTGTGCTTGATCACAAGCCTGAATGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR GCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATTCCCCGCACGCTTCTTaGCGGAGGGGTAATCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHSPHAS*RRGNPP Trigger: GGGAGGATTACCCCTCCGGCAAGAAGCGTGCGGGGA...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR GCA 90 bp | TACATTGTCTGCAGACATCAGGGACCGGTAGTTAATGAAGTTGTCATAACACCATCCCCGCACGCTTCTTaGCGGAGGGGTAATCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YIVCRHQGPVVNEVVITPSPHAS*RRGNPP Trigger: GGGAGGATTACCCCTCCGGCAAGAAGCGTGCGGGGA...TGGTGTTATGACAACTTCATTAACTACCGGTCCCTGATGTCTGCAGACAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | GCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGCTTGATATCAGCATTTCCCAGGTCTaGTCCGTCCAGCTCGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHVIILRGNFHQPFWLDISISQV*SVQLDP Trigger: CGGGTCGAGCTGGACGGACCAGACCTGGGAAATGCT...GATATCAAGCCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTTGCAGCCACTCTCCTaGGCTGTGTACAGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCLQPLS*AVYRRL Trigger: GAGTCGCCTGTACACAGCCCAGGAGAGTGGCTGCAA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATTTGCAGCCACTCTCCTaGGCTGTGTACAGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPACEISTSTRQIKSVHLQPLS*AVYRRL Trigger: GAGTCGCCTGTACACAGCCCAGGAGAGTGGCTGCAA...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACACATCTGCAGCTTTCTTaGCCTCCGTGGGGCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SASVWRQKIVSTEAQVVTHLQLS*PPWGEQ Trigger: TTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATG...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATTCATCAGCAACTCTCTaGGCCACACTCATTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHSSATL*ATLIAA Trigger: GGCTGCAATGAGTGTGGCTCAGAGAGTTGCTGATGA...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR GCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATCCCCGCACGCTTCTTaGCGGAGGGGTAATCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSPHAS*RRGNPP Trigger: GGGAGGATTACCCCTCCGGCAAGAAGCGTGCGGGGA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
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| CDS-3UTR CCA 90 bp | TACATTGTCTGCAGACATCAGGGACCGGTAGTTAATGAAGTTGTCATAACACCACTTTCTTGGCCTCCGTaGGGCGAACAAAACACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YIVCRHQGPVVNEVVITPLSWPP*GEQNTD Trigger: GTCAGTGTTTTGTTCGCCCCACGGAGGCCAAGAAAG...TGGTGTTATGACAACTTCATTAACTACCGGTCCCTGATGTCTGCAGACAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR TCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCGACCCGCCCTTTGCTaGGCTGAAGCTTTACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCRPALC*AEALLM Trigger: CATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR GCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATCCAAGCTTCTTCAGCTaGAACACAACCGATCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHPSFFS*NTTDPR Trigger: CCTAGGATCGGTTGTGTTGCAGCTGAAGAAGCTTGG...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | GACATTCAGCAGTGTCAGATGATCTCCATCTATGTGGGCAAATCTCATCTTGGCCCAGTGTGTGTTGAGTaGGCAGAATGTGTAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: DIQQCQMISIYVGKSHLGPVCVE*AECVEC Trigger: ACATTCTACACATTCTGCCCACTCAACACACACTGG...GCCAAGATGAGATTTGCCCACATAGATGGAGATCATCTGACACTGCTGAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGAGCATTTCCCAGGTCTaGTCCGTCCAGCTCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMSISQV*SVQLDP Trigger: CGGGTCGAGCTGGACGGACCAGACCTGGGAAATGCT...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGCATTTCCCAGGTCTaGTCCGTCCAGCTCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSISQV*SVQLDP Trigger: CGGGTCGAGCTGGACGGACCAGACCTGGGAAATGCT...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
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| CDS-3UTR CCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCTTTCTTGGCCTCCGTaGGGCGAACAAAACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCLSWPP*GEQNTV Trigger: CACAGTGTTTTGTTCGCCCCACGGAGGCCAAGAAAG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCGCCCTTTGCTGAGCTaGAGCTTTACTAATGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCRPLLS*SFTNGS Trigger: ACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATTCTCTGTATAAAGCCTaGAGCATTTCCCAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHSLYKA*SISQVW Trigger: CCAGACCTGGGAAATGCTTCAGGCTTTATACAGAGA...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTAATAGTCCCTGCTTGTaGAATCAGTACTTCGACGAG | + |
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Preference number: 4 (lower is better) Translates to: EVSASVWRQKIVSTEAQVNSPCL*NQYFDE Trigger: CTCGTCGAAGTACTGATTTCACAAGCAGGGACTATT...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATTGCAGCCACTCTCCTaGGCTGTGTACAGGCGACTC | + |
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Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLQPLS*AVYRRL Trigger: GAGTCGCCTGTACACAGCCCAGGAGAGTGGCTGCAA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
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| CDS-3UTR CCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATGAGTATCCAACTTCCTaGCCTAACATCACGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHEYPTS*PNITSI Trigger: GATGGACGTGATGTTAGGCCAGGAAGTTGGATACTC...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCEGDRS*LHEVAS Trigger: GGATGCTACTTCGTGAAGCCATGAACGATCCCCTTC...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTATTCTTGATAGCTGCTaGCGTACATTGTCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: EVSASVWRQKIVSTEAQVILDSC*RTLSAD Trigger: GTCTGCAGACAATGTACGCCAGCAGCTATCAAGAAT...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACACTCTGCAATATTAGTTaGCACCACCACCTTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SASVWRQKIVSTEAQVVTLCNIS*HHHLSS Trigger: GGAAGAAAGGTGGTGGTGTCAACTAATATTGCAGAG...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR TCA 90 bp | AACAGATTCATGATTTTGTTTAAAAGCGTGGTAGACATTCAGCAGTGTCAGATGCGACCCGCCCTTTGCTaGGCTGAAGCTTTACTAATG | + |
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Preference number: 4 (lower is better) Translates to: NRFMILFKSVVDIQQCQMRPALC*AEALLM Trigger: CATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCG...CATCTGACACTGCTGAATGTCTACCACGCTTTTAAACAAAATCATGAATCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR TCA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTTTCAGCAGTGTCAGATaGTCTCCATCTATGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFFSSVR*SPSMWA Trigger: TGCCCACATAGATGGAGATCATCTGACACTGCTGAA...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR GCA 90 bp | TACATTGTCTGCAGACATCAGGGACCGGTAGTTAATGAAGTTGTCATAACACCATCAAAAATGCGTTGTTaGTGCTGGGGTGGAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: YIVCRHQGPVVNEVVITPSKMRC*CWGGSV Trigger: TACACTTCCACCCCAGCAGCAACAACGCATTTTTGA...TGGTGTTATGACAACTTCATTAACTACCGGTCCCTGATGTCTGCAGACAATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR GCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAGTGGTGGCTCAAAAATaGGTTGTTGCTGCTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRVVAQK*VVAAGV Trigger: CACCCCAGCAGCAACAACGCATTTTTGAGCCACCAC...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR GCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAACCAAGCTTCTTCAGCTaGAACACAACCGATCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKPSFFS*NTTDPR Trigger: CCTAGGATCGGTTGTGTTGCAGCTGAAGAAGCTTGG...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR GCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGACTGGCGTACATTGTCTaGAGACATCAGGGACCGGTA | + |
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Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRLAYIV*RHQGPV Trigger: TACCGGTCCCTGATGTCTGCAGACAATGTACGCCAG...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTGGGCAGGTTGGTGAATaGATTAATGCACTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCGQVGE*INALWK Trigger: CTTCCACAGTGCATTAATCCATTCACCAACCTGCCC...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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| CDS-3UTR CCA 90 bp | TGGGAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGGAGTATCCAACTTCCTaGCCTAACATCACGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: WEIAHVIILRGNFHQPFWEYPTS*PNITSI Trigger: GATGGACGTGATGTTAGGCCAGGAAGTTGGATACTC...CCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGCAATTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKEGDRS*LHEVAS Trigger: GGATGCTACTTCGTGAAGCCATGAACGATCCCCTTC...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | CGTCAGCACAAACTCATTATAAAGCACCCATTCAGGCTTGTGATCAAGCACAGTCAGAGTTTCAGGAGCTaGTGGGTCCATAAAATCAAA | + |
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Preference number: 4 (lower is better) Translates to: RQHKLIIKHPFRLVIKHSQSFRS*WVHKIK Trigger: TTTGATTTTATGGACCCACCAGCTCCTGAAACTCTG...ACTGTGCTTGATCACAAGCCTGAATGGGTGCTTTATAATGAGTTTGTGCTGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
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| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACATCTGCAGCTTTCTTaGCCTCCGTGGGGCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTHLQLS*PPWGEQ Trigger: TTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATCATCAGCAACTCTCTaGGCCACACTCATTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSSATL*ATLIAA Trigger: GGCTGCAATGAGTGTGGCTCAGAGAGTTGCTGATGA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TGGGAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGCTCTGCAATATTAGTTaGCACCACCACCTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEIAHVIILRGNFHQPFWLCNIS*HHHLSS Trigger: GGAAGAAAGGTGGTGGTGTCAACTAATATTGCAGAG...CCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGCAATTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR TCA 90 bp | TTTCACCAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGCCCTTTGCTGAGCTaGAGCTTTACTAATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHQPFWLDICTCPDIILCRPLLS*SFTNGS Trigger: ACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCG...ACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTGGTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACGACCCGCCCTTTGCTaGGCTGAAGCTTTACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTRPALC*AEALLM Trigger: CATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTAAAATGCGTTGTTGCTaGTGGGGTGGAAGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCKMRCC*WGGSVE Trigger: TTCTACACTTCCACCCCAGCAGCAACAACGCATTTT...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTCAAAAATGCGTTGTTaGTGCTGGGGTGGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCSKMRC*CWGGSV Trigger: TACACTTCCACCCCAGCAGCAACAACGCATTTTTGA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAGTGGTGGCTCAAAAATaGGTTGTTGCTGCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTVVAQK*VVAAGV Trigger: CACCCCAGCAGCAACAACGCATTTTTGAGCCACCAC...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACTGGCGTACATTGTCTaGAGACATCAGGGACCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQLAYIV*RHQGPV Trigger: TACCGGTCCCTGATGTCTGCAGACAATGTACGCCAG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAAGCACAGTAGAGGGATaGAACTGGACCACCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRSTVEG*NWTTWL Trigger: TAACCAGGTGGTCCAGTTGCATCCCTCTACTGTGCT...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCTCCACACACCACTGTaGTATCTGTGTTGTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLDICTCPDIILCRQLHTPL*YLCCFT Trigger: GGTAAAACAACACAGATACCACAGTGGTGTGTGGAG...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTATGCGTTGTTGCTGCTaGGGTGGAAGTGTAGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFMRCCC*GGSVEY Trigger: ATATTCTACACTTCCACCCCAGCAGCAACAACGCAT...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAGTTTCAGGAGCTGGTaGGTCCATAAAATCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHSFRSW*VHKIKV Trigger: CACTTTGATTTTATGGACCCACCAGCTCCTGAAACT...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | CTTTGTCGTCAGCACAAACTCATTATAAAGCACCCATTCAGGCTTGTGATCAAGAGTTTCAGGAGCTGGTaGGTCCATAAAATCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCRQHKLIIKHPFRLVIKSFRSW*VHKIKV Trigger: CACTTTGATTTTATGGACCCACCAGCTCCTGAAACT...CTTGATCACAAGCCTGAATGGGTGCTTTATAATGAGTTTGTGCTGACGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTGGAACTCTGCCATCATaGATCCCAATTCAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFGTLPS*IPIQSD Trigger: ATCTGACTGAATTGGGATCCATGATGGCAGAGTTCC...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | GCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGCTTGATATCGGAACTCTGCCATCATaGATCCCAATTCAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHVIILRGNFHQPFWLDIGTLPS*IPIQSD Trigger: ATCTGACTGAATTGGGATCCATGATGGCAGAGTTCC...GATATCAAGCCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACTTTCTTGGCCTCCGTaGGGCGAACAAAACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLSWPP*GEQNTV Trigger: CACAGTGTTTTGTTCGCCCCACGGAGGCCAAGAAAG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTCCCATACAGGGAGCTaGAGTCGTTTCTTTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCSHTGS*SRFFRI Trigger: TATTCTAAAGAAACGACTTCAGCTCCCTGTATGGGA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATTCCCATACAGGGAGCTaGAGTCGTTTCTTTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IVPACEISTSTRQIKSVHSHTGS*SRFFRI Trigger: TATTCTAAAGAAACGACTTCAGCTCCCTGTATGGGA...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACGCCCTTTGCTGAGCTaGAGCTTTACTAATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTRPLLS*SFTNGS Trigger: ACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | AACAGATTCATGATTTTGTTTAAAAGCGTGGTAGACATTCAGCAGTGTCAGATGTCTCTGTATAAAGCCTaGAGCATTTCCCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRFMILFKSVVDIQQCQMSLYKA*SISQVW Trigger: CCAGACCTGGGAAATGCTTCAGGCTTTATACAGAGA...CATCTGACACTGCTGAATGTCTACCACGCTTTTAAACAAAATCATGAATCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACAAAAACACTGTGGGACTaGCAACATAGCAGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASVWRQKIVSTEAQVVTKTLWD*QHSSNR Trigger: TCTATTACTGCTATGTTGTCAGTCCCACAGTGTTTT...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACAGATCACTGTCCGAATTaGTGCTTCAAGATAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASVWRQKIVSTEAQVVTDHCPN*CFKIIS Trigger: AGAGATTATCTTGAAGCAGCAATTCGGACAGTGATC...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAAAAATGCGTTGTTGCTaGTGGGGTGGAAGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKKMRCC*WGGSVE Trigger: TTCTACACTTCCACCCCAGCAGCAACAACGCATTTT...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACCAAGCTTCTTCAGCTaGAACACAACCGATCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQPSFFS*NTTDPR Trigger: CCTAGGATCGGTTGTGTTGCAGCTGAAGAAGCTTGG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTAGTCTTCAAATCGAATaGAGTATCCAACTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFSLQIE*SIQLPG Trigger: GCCAGGAAGTTGGATACTCCATTCGATTTGAAGACT...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQEGDRS*LHEVAS Trigger: GGATGCTACTTCGTGAAGCCATGAACGATCCCCTTC...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | AAAAGCGTGGTAGACATTCAGCAGTGTCAGATGATCTCCATCTATGTGGGCAAATCACACATATGTATTTaGATCACTGTCCGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVVDIQQCQMISIYVGKSHICI*ITVRIA Trigger: AGCAATTCGGACAGTGATCCAAATACATATGTGTGA...TTTGCCCACATAGATGGAGATCATCTGACACTGCTGAATGTCTACCACGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATGCAACTGGACCACCTaGTTATCTTTCACAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SASVWRQKIVSTEAQVVTCNWTT*LSFTVK Trigger: TTTAACTGTGAAAGATAACCAGGTGGTCCAGTTGCA...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAGTAGAGGGATGCAACTaGACCACCTGGTTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRVEGCN*TTWLSF Trigger: GAAAGATAACCAGGTGGTCCAGTTGCATCCCTCTAC...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATCTCTGTATAAAGCCTaGAGCATTTCCCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSLYKA*SISQVW Trigger: CCAGACCTGGGAAATGCTTCAGGCTTTATACAGAGA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATTCAGCAGTGTCAGATaGTCTCCATCTATGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQFSSVR*SPSMWA Trigger: TGCCCACATAGATGGAGATCATCTGACACTGCTGAA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAGGGCGAACAAAACACTaGCAACATAGCAGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKGRTKH*QHSSNR Trigger: TCTATTACTGCTATGTTGTCAGTGTTTTGTTCGCCC...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR GCA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTGGTTTTTGCACTACTaGAGTCTTCAAATCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCWFLHY*SLQIEW Trigger: CCATTCGATTTGAAGACTGCAGTAGTGCAAAAACCA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTCTTAAGAATGGTTTTTaGACTACTGCAGTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVSASVWRQKIVSTEAQVLKNGF*TTAVFK Trigger: TTTGAAGACTGCAGTAGTGCAAAAACCATTCTTAAG...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATGATCACTGTCCGAATTaGTGCTTCAAGATAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVPACEISTSTRQIKSVHDHCPN*CFKIIS Trigger: AGAGATTATCTTGAAGCAGCAATTCGGACAGTGATC...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTATAATTCTTGATAGCTaGTGGCGTACATTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFIILDS*WRTLSA Trigger: TGCAGACAATGTACGCCAGCAGCTATCAAGAATTAT...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGACCAGTGTGTGTTGAGTaGGCAGAATGTGTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRPVCVE*AECVEC Trigger: ACATTCTACACATTCTGCCCACTCAACACACACTGG...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAGGGCAGGTTGGTGAATaGATTAATGCACTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTGQVGE*INALWK Trigger: CTTCCACAGTGCATTAATCCATTCACCAACCTGCCC...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAGAGTATCCAACTTCCTaGCCTAACATCACGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTEYPTS*PNITSI Trigger: GATGGACGTGATGTTAGGCCAGGAAGTTGGATACTC...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAAGTCTTCAAATCGAATaGAGTATCCAACTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKSLQIE*SIQLPG Trigger: GCCAGGAAGTTGGATACTCCATTCGATTTGAAGACT...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | AACAGATTCATGATTTTGTTTAAAAGCGTGGTAGACATTCAGCAGTGTCAGATGATGCGTTGTTGCTGCTaGGGTGGAAGTGTAGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NRFMILFKSVVDIQQCQMMRCCC*GGSVEY Trigger: ATATTCTACACTTCCACCCCAGCAGCAACAACGCAT...CATCTGACACTGCTGAATGTCTACCACGCTTTTAAACAAAATCATGAATCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGGGGCAAATCTCATCTTaGCCTCATCTGCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMGQISS*PHLQLS Trigger: AGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCC...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAGGGCAAATCTCATCTTaGCCTCATCTGCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTGQISS*PHLQLS Trigger: AGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCC...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACTCTGCAATATTAGTTaGCACCACCACCTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLCNIS*HHHLSS Trigger: GGAAGAAAGGTGGTGGTGTCAACTAATATTGCAGAG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAATAGTCCCTGCTTGTaGAATCAGTACTTCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTNSPCL*NQYFDE Trigger: CTCGTCGAAGTACTGATTTCACAAGCAGGGACTATT...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TACATTGTCTGCAGACATCAGGGACCGGTAGTTAATGAAGTTGTCATAACACCACTTAAGAATGGTTTTTaGACTACTGCAGTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YIVCRHQGPVVNEVVITPLKNGF*TTAVFK Trigger: TTTGAAGACTGCAGTAGTGCAAAAACCATTCTTAAG...TGGTGTTATGACAACTTCATTAACTACCGGTCCCTGATGTCTGCAGACAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAAAAATGCGTTGTTGCTaGTGGGGTGGAAGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQKMRCC*WGGSVE Trigger: TTCTACACTTCCACCCCAGCAGCAACAACGCATTTT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATCAAAAATGCGTTGTTaGTGCTGGGGTGGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQSKMRC*CWGGSV Trigger: TACACTTCCACCCCAGCAGCAACAACGCATTTTTGA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAGTCCAACTGTCTCTTTaGTTCACACTGTGGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRVQLSL*FTLWEI Trigger: AATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGAC...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACCAGTGTGTGTTGAGTaGGCAGAATGTGTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQPVCVE*AECVEC Trigger: ACATTCTACACATTCTGCCCACTCAACACACACTGG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGCTCCACACACCACTGTaGTATCTGTGTTGTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMLHTPL*YLCCFT Trigger: GGTAAAACAACACAGATACCACAGTGGTGTGTGGAG...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACTCCACACACCACTGTaGTATCTGTGTTGTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLHTPL*YLCCFT Trigger: GGTAAAACAACACAGATACCACAGTGGTGTGTGGAG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAATGCGTTGTTGCTGCTaGGGTGGAAGTGTAGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQMRCCC*GGSVEY Trigger: ATATTCTACACTTCCACCCCAGCAGCAACAACGCAT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGACAGAGTTTCAGGAGCTaGTGGGTCCATAAAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRQSFRS*WVHKIK Trigger: TTTGATTTTATGGACCCACCAGCTCCTGAAACTCTG...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAGGAACTCTGCCATCATaGATCCCAATTCAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTGTLPS*IPIQSD Trigger: ATCTGACTGAATTGGGATCCATGATGGCAGAGTTCC...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATTCTTGATAGCTGCTaGCGTACATTGTCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTILDSC*RTLSAD Trigger: GTCTGCAGACAATGTACGCCAGCAGCTATCAAGAAT...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATCCCATACAGGGAGCTaGAGTCGTTTCTTTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSHTGS*SRFFRI Trigger: TATTCTAAAGAAACGACTTCAGCTCCCTGTATGGGA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAGTTGTAGTCACAACTTaGAATAACCATTTTAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FWLDICTCPDIILCRQHKVVVTT*NNHFSE Trigger: CTCGCTAAAATGGTTATTGCAAGTTGTGACTACAAC...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGTCTTCAAATCGAATaGAGTATCCAACTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSLQIE*SIQLPG Trigger: GCCAGGAAGTTGGATACTCCATTCGATTTGAAGACT...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAAGTTTCAGGAGCTGGTaGGTCCATAAAATCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQSFRSW*VHKIKV Trigger: CACTTTGATTTTATGGACCCACCAGCTCCTGAAACT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACAGAGTTTCAGGAGCTaGTGGGTCCATAAAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQQSFRS*WVHKIK Trigger: TTTGATTTTATGGACCCACCAGCTCCTGAAACTCTG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR TCA 90 bp | AACAGATTCATGATTTTGTTTAAAAGCGTGGTAGACATTCAGCAGTGTCAGATGTCATCAATTTCCTCTTaGCCAGTCAAGAAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRFMILFKSVVDIQQCQMSSISS*PVKKRR Trigger: TCTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGA...CATCTGACACTGCTGAATGTCTACCACGCTTTTAAACAAAATCATGAATCTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR TCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAAAAACACTGTGGGACTaGCAACATAGCAGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQKTLWD*QHSSNR Trigger: TCTATTACTGCTATGTTGTCAGTCCCACAGTGTTTT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATGGTTTTTGCACTACTaGAGTCTTCAAATCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTWFLHY*SLQIEW Trigger: CCATTCGATTTGAAGACTGCAGTAGTGCAAAAACCA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGATCACTGTCCGAATTaGTGCTTCAAGATAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQDHCPN*CFKIIS Trigger: AGAGATTATCTTGAAGCAGCAATTCGGACAGTGATC...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAGTTGTAGTCACAACTTaGAATAACCATTTTAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRVVVTT*NNHFSE Trigger: CTCGCTAAAATGGTTATTGCAAGTTGTGACTACAAC...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAATAATTCTTGATAGCTaGTGGCGTACATTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQIILDS*WRTLSA Trigger: TGCAGACAATGTACGCCAGCAGCTATCAAGAATTAT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CCA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGATCACACATATGTATTTaGATCACTGTCCGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRSHICI*ITVRIA Trigger: AGCAATTCGGACAGTGATCCAAATACATATGTGTGA...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR TCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGTCATCAATTTCCTCTTaGCCAGTCAAGAAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMSSISS*PVKKRR Trigger: TCTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGA...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATCATCAATTTCCTCTTaGCCAGTCAAGAAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQSSISS*PVKKRR Trigger: TCTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGTTGTAGTCACAACTTaGAATAACCATTTTAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQVVVTT*NNHFSE Trigger: CTCGCTAAAATGGTTATTGCAAGTTGTGACTACAAC...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGTCTAAATGTGCCACTTaGATAAAATACCCAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMSKCAT*IKYPVT Trigger: GGTTACTGGGTATTTTATGCAAGTGGCACATTTAGA...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGCACACTGTGGGAAATTaGTCATGTCATAATATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCVYRSTSCNISQLLKGMHTVGN*SCHNIE Trigger: CTCAATATTATGACATGAGCAATTTCCCACAGTGTG...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATCACACATATGTATTTaGATCACTGTCCGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSHICI*ITVRIA Trigger: AGCAATTCGGACAGTGATCCAAATACATATGTGTGA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR GCA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACTTAAGAATGGTTTTTaGACTACTGCAGTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLKNGF*TTAVFK Trigger: TTTGAAGACTGCAGTAGTGCAAAAACCATTCTTAAG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS TCA 90 bp | TTTCCCAGGTCTGGTCCGTCCAGCTCGACCCGCCCTTTGCTGAGCTaGAGCTTTACTAATGGCAGTCACCAGAAGAGACTCGACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPRSGPSSSTRPLLS*SFTNGSHQKRLDSD Trigger: ATCAGAGTCGAGTCTCTTCTGGTGACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCGAGCTGGACGGACCAGACCTGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS TCA 90 bp | AAGCATTTCCCAGGTCTGGTCCGTCCAGCTCGACCCGCCCTTTGCTaGGCTGAAGCTTTACTAATGGCAGTCACCAGAAGAGACTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: KHFPGLVRPARPALC*AEALLMAVTRRDST Trigger: AGTCGAGTCTCTTCTGGTGACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCGAGCTGGACGGACCAGACCTGGGAAATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CCA 90 bp | AGCCACTCTCCTGGGCTGTGTACAGGCGACTCCTCTTTTGGGTCCTaGCAAGGATCGCATATACTCCACACACCACTGTGGTATCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSPGLCTGDSSFGS*QGSHILHTPLWYLC Trigger: ACACAGATACCACAGTGGTGTGTGGAGTATATGCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTGTACACAGCCCAGGAGAGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CCA 90 bp | TCAGCAGTGTCAGATGATCTCCATCTATGTGGGCAAATCTCATCTTaGCCTCATCTGCAGCTTTCTTGGCCTCCGTGGGGCGAACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SAVSDDLHLCGQISS*PHLQLSWPPWGEQN Trigger: GTTTTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCCACATAGATGGAGATCATCTGACACTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTCAGGCGACTCCTCTTTaGGGTCCTGGCAAGGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: EVSASVWRQKIVSTEAQVQATPL*GPGKDR Trigger: GCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTG...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS CCA 90 bp | CATCAAGAATTATCACACCATAACGCTCCAGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCCCGTCAGTCATATACCCATCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQELSHHNAPEGDRS*LHEVASRQSYTHRS Trigger: GGACCGATGGGTATATGACTGACGGGATGCTACTTCGTGAAGCCATGAACGATCCCCTTCTGGAGCGTTATGGTGTGATAATTCTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195922.2 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATCAGGCGACTCCTCTTTaGGGTCCTGGCAAGGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: IVPACEISTSTRQIKSVHQATPL*GPGKDR Trigger: GCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTG...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS TCA 90 bp | TGTTGTCCTGCATTTCTGTTTTATAAGCTTTCTCTGTATAAAGCCTaGAGCATTTCCCAGGTCTGGTCCGTCCAGCTCGACCCGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCPAFLFYKLSLYKA*SISQVWSVQLDPPF Trigger: AAAGGGCGGGTCGAGCTGGACGGACCAGACCTGGGAAATGCTTCAGGCTTTATACAGAGAAAGCTTATAAAACAGAAATGCAGGACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTCATCTGCAGCTTTCTaGGCCTCCGTGGGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCSSAAF*ASVGRT Trigger: TGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGTCATCTGCAGCTTTCTaGGCCTCCGTGGGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: QPFWLDICTCPDIILCRQSSAAF*ASVGRT Trigger: TGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGA...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATTGGCTCAAAAATGCGTaGTTGCTGCTGGGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLIDFSSMSYSVNTKGRHWLKNA*LLLGWK Trigger: CTTCCACCCCAGCAGCAACAACGCATTTTTGAGCCA...ATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATCAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACAAATGAGCCGAGTGGGTaGAGTGAGCTGAATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SASVWRQKIVSTEAQVVTNEPSG*SELNEK Trigger: CTTCTCATTCAGCTCACTCAACCCACTCGGCTCATT...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACAGGAGTATGGGGCAGGTaGGTGAATGGATTAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SASVWRQKIVSTEAQVVTGVWGR*VNGLMH Trigger: GTGCATTAATCCATTCACCAACCTGCCCCATACTCC...TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACAGGCGACTCCTCTTTaGGGTCCTGGCAAGGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTQATPL*GPGKDR Trigger: GCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | GGACCACCTGGTTATCTTTCACAGTTAAATAATGCCCCGTTCGTTCTAAATGTGCTCAAAAATGCGTTGTaGCTGCTGGGGTGGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPPGYLSQLNNAPFVLNVLKNAL*LLGWKC Trigger: ACACTTCCACCCCAGCAGCAACAACGCATTTTTGAG...CACATTTAGAACGAACGGGGCATTATTTAACTGTGAAAGATAACCAGGTGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGTGGCTCAAAAATGCGTaGTTGCTGCTGGGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPFWLDICTCPDIILCRQWLKNA*LLLGWK Trigger: CTTCCACCCCAGCAGCAACAACGCATTTTTGAGCCA...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCTCAAAAATGCGTTGTaGCTGCTGGGGTGGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCLKNAL*LLGWKC Trigger: ACACTTCCACCCCAGCAGCAACAACGCATTTTTGAG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATCATCTGCAGCTTTCTaGGCCTCCGTGGGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQSSAAF*ASVGRT Trigger: TGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTGGGCAAATCTCATCTaGGCCTCATCTGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCWANLI*ASSAAF Trigger: GAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCCA...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAAGCTGCTGGCGTACATaGTCTGCAGACATCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRSCWRT*SADIRD Trigger: GTCCCTGATGTCTGCAGACAATGTACGCCAGCAGCT...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS GCA 90 bp | TTCCTTGGATTGAAGTTTGGCAATAATGCGGTCCAACTGTCTCTTTaGTTCACACTGTGGGAAATTGCTCATGTCATAATATTGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLGLKFGNNAVQLSL*FTLWEIAHVIILRG Trigger: GCCCCTCAATATTATGACATGAGCAATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGACCGCATTATTGCCAAACTTCAATCCAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAGGAGTATGGGGCAGGTaGGTGAATGGATTAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FWLDICTCPDIILCRQHKGVWGR*VNGLMH Trigger: GTGCATTAATCCATTCACCAACCTGCCCCATACTCC...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGCTGCTGGCGTACATaGTCTGCAGACATCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTSCWRT*SADIRD Trigger: GTCCCTGATGTCTGCAGACAATGTACGCCAGCAGCT...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTACCAACCATTCTGGCTaGATATCTGTACATGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFTNHSG*ISVHVR Trigger: CCGGACATGTACAGATATCAAGCCAGAATGGTTGGT...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTGTAACATTTGGTCCAACTGTCTCTTaGCTTCACACTGTGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASVWRQKIVSTEAQVVTFGPTVS*LHTVGN Trigger: ATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGACC...AAATGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | CTTTGTCGTCAGCACAAACTCATTATAAAGCACCCATTCAGGCTTGTGATCAAGTCTGTAAATCTATCCTaGTATTCCCATACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCRQHKLIIKHPFRLVIKSVNLS*YSHTGS Trigger: GCTCCCTGTATGGGAATACAAGGATAGATTTACAGA...CTTGATCACAAGCCTGAATGGGTGCTTTATAATGAGTTTGTGCTGACGACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCATTCTGGGGATCACTGTCCGAATaGCTGCTTCAAGATAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: WEIAHVIILRGNFHQPFWGSLSE*LLQDNL Trigger: GAGATTATCTTGAAGCAGCAATTCGGACAGTGATCC...CCAGAATGGTTGGTGAAAATTGCCCCTCAATATTATGACATGAGCAATTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATGGCTCAAAAATGCGTaGTTGCTGCTGGGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQWLKNA*LLLGWK Trigger: CTTCCACCCCAGCAGCAACAACGCATTTTTGAGCCA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS CCA 90 bp | AAGTTTGGCAATAATGCGGTCCAACTGTCTCTTTGCTTCACACTGTaGGAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: KFGNNAVQLSLCFTL*EIAHVIILRGNFHQ Trigger: TTGGTGAAAATTGCCCCTCAATATTATGACATGAGCAATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGACCGCATTATTGCCAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCTGATAAGCATAGCATaGGTGGAAGCTCTCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCLISIA*VEALNS Trigger: AGAATTGAGAGCTTCCACCAATGCTATGCTTATCAG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCTGATAAGCATAGCATaGGTGGAAGCTCTCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPFWLDICTCPDIILCRQLISIA*VEALNS Trigger: AGAATTGAGAGCTTCCACCAATGCTATGCTTATCAG...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAAATGAGCCGAGTGGGTaGAGTGAGCTGAATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQNEPSG*SELNEK Trigger: CTTCTCATTCAGCTCACTCAACCCACTCGGCTCATT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGGAGTATGGGGCAGGTaGGTGAATGGATTAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQGVWGR*VNGLMH Trigger: GTGCATTAATCCATTCACCAACCTGCCCCATACTCC...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACTCAAAAATGCGTTGTaGCTGCTGGGGTGGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQLKNAL*LLGWKC Trigger: ACACTTCCACCCCAGCAGCAACAACGCATTTTTGAG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | GAAGTCAGTGCCTCTGTATGGAGACAGAAGATTGTGTCTACAGAAGCACAAGTTAGGATTATATACCTTTaGTTTTGCAAATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVSASVWRQKIVSTEAQVRIIYL*FCKSRV Trigger: GACCCTGGATTTGCAAAACAAAAGGTATATAATCCT...AACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGGCACTGACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATGGGCAAATCTCATCTaGGCCTCATCTGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTWANLI*ASSAAF Trigger: GAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCCA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTGCTTGTGAAATCAGTACTTCGACGAGGCAAATTAAATCTGTCCATTTCACACATATGTATTaGGATCACTGTCCGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVPACEISTSTRQIKSVHFTHMY*DHCPNC Trigger: GCAATTCGGACAGTGATCCAAATACATATGTGTGAA...ATGGACAGATTTAATTTGCCTCGTCGAAGTACTGATTTCACAAGCAGGGACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTCTCATCAATTTCCTCTaGACCAGTCAAGAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDFSSMSYSVNTKGRHKCLINFL*TSQEKK Trigger: CTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGAG...ACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | CAACCATTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCTCATCAATTTCCTCTaGACCAGTCAAGAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPFWLDICTCPDIILCRQLINFL*TSQEKK Trigger: CTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGAG...CTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAATGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGATCTGTAAATCTATCCTaGTATTCCCATACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRSVNLS*YSHTGS Trigger: GCTCCCTGTATGGGAATACAAGGATAGATTTACAGA...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | GATTGTGTCTACAGAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGGGATCACTGTCCGAATaGCTGCTTCAAGATAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DCVYRSTSCNISQLLKGMGSLSE*LLQDNL Trigger: GAGATTATCTTGAAGCAGCAATTCGGACAGTGATCC...CATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTCTGTAGACACAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAGGATCACTGTCCGAATaGCTGCTTCAAGATAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQGSLSE*LLQDNL Trigger: GAGATTATCTTGAAGCAGCAATTCGGACAGTGATCC...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACACTGATAAGCATAGCATaGGTGGAAGCTCTCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTLISIA*VEALNS Trigger: AGAATTGAGAGCTTCCACCAATGCTATGCTTATCAG...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAATCTGTAAATCTATCCTaGTATTCCCATACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQSVNLS*YSHTGS Trigger: GCTCCCTGTATGGGAATACAAGGATAGATTTACAGA...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGATTCACACATATGTATTaGGATCACTGTCCGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRFTHMY*DHCPNC Trigger: GCAATTCGGACAGTGATCCAAATACATATGTGTGAA...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTCTGGCTTGATATCTGTACATGTCCGGATATAATTCTTTGTCGTCAGCACAAAAGGATTATATACCTTTaGTTTTGCAAATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FWLDICTCPDIILCRQHKRIIYL*FCKSRV Trigger: GACCCTGGATTTGCAAAACAAAAGGTATATAATCCT...TTTGTGCTGACGACAAAGAATTATATCCGGACATGTACAGATATCAAGCCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200186.5 |
||
| CDS-3UTR CAA 90 bp | ACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGAGCTCATGTCATAATATaGAGGGGCAATTTTCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: TTSKRNVNNYNDHAYHGRAHVII*RGNFHQ Trigger: TTGGTGAAAATTGCCCCTCAATATTATGACATGAGC...TCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACATTCACACATATGTATTaGGATCACTGTCCGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FVPEMAKVLCVTTKTPVTFTHMY*DHCPNC Trigger: GCAATTCGGACAGTGATCCAAATACATATGTGTGAA...TGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAACTCATCAATTTCCTCTaGACCAGTCAAGAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQLINFL*TSQEKK Trigger: CTTCTTTTCTTGACTGGTCAAGAGGAAATTGATGAG...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS-3UTR CAA 90 bp | TTGTACCTGAAATGGCCAAAGTATTATGTGTTACAACAAAGACTCCAGTTACAAAGGATTATATACCTTTaGTTTTGCAAATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYLKWPKYYVLQQRLQLQRIIYL*FCKSRV Trigger: GACCCTGGATTTGCAAAACAAAAGGTATATAATCCT...TTGTAACTGGAGTCTTTGTTGTAACACATAATACTTTGGCCATTTCAGGTACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199321.5 |
||
| CDS TCA 72 bp | CCAGGTCTGGTCCGTCCAGCTCGACCCGCCCTTTGCTaGGCTGAAGCTTTACTAATGGCAGTCACCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLVRPARPALC*AEALLMAVTRR Trigger: TCTTCTGGTGACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCGAGCTGGACGGACCAGACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CCA 72 bp | CCTGGGCTGTGTACAGGCGACTCCTCTTTTGGGTCCTaGCAAGGATCGCATATACTCCACACACCACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLCTGDSSFGS*QGSHILHTPLW Trigger: CCACAGTGGTGTGTGGAGTATATGCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTGTACACAGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CCA 72 bp | CCACTCTCCTGGGCTGTGTACAGGCGACTCCTCTTTTaGGTCCTGGCAAGGATCGCATATACTCCACACACC | + |
|
Preference number: 6 (lower is better) Translates to: PLSWAVYRRLLF*VLARIAYTPHT Trigger: GGTGTGTGGAGTATATGCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTGTACACAGCCCAGGAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CAA 72 bp | GCCACTCTCCTGGGCTGTGTACAGGCGACTCCTCTTTaGGGTCCTGGCAAGGATCGCATATACTCCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: ATLLGCVQATPL*GPGKDRIYSTH Trigger: GTGTGTGGAGTATATGCGATCCTTGCCAGGACCCAAAAGAGGAGTCGCCTGTACACAGCCCAGGAGAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS TCA 72 bp | TCTGGTCCGTCCAGCTCGACCCGCCCTTTGCTGAGCTaGAGCTTTACTAATGGCAGTCACCAGAAGAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SGPSSSTRPLLS*SFTNGSHQKRL Trigger: GAGTCTCTTCTGGTGACTGCCATTAGTAAAGCTTCAGCTCAGCAAAGGGCGGGTCGAGCTGGACGGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS CCA 72 bp | GGGCAAATCTCATCTTGGCCTCATCTGCAGCTTTCTTaGCCTCCGTGGGGCGAACAAAACACTGTGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GQISSWPHLQLS*PPWGEQNTVGL Trigger: CAGTCCCACAGTGTTTTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 |
||
| CDS CAA 90 bp | CCATCTATGTGGGCAAATCTCATCTTGGCCTCATCTGCAGCTTTCTaGGCCTCCGTGGGGCGAACAAAACACTGTGGGACTGACAACATA | + |
|
Preference number: 6 (lower is better) Translates to: PSMWANLILASSAAF*ASVGRTKHCGTDNI Trigger: TATGTTGTCAGTCCCACAGTGTTTTGTTCGCCCCACGGAGGCCAAGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCCACATAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 |
||
| CDS CCA 72 bp | TTATCACACCATAACGCTCCAGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCCCGTCAGTCATATACC | + |
|
Preference number: 6 (lower is better) Translates to: LSHHNAPEGDRS*LHEVASRQSYT Trigger: GGTATATGACTGACGGGATGCTACTTCGTGAAGCCATGAACGATCCCCTTCTGGAGCGTTATGGTGTGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195922.2 |
||
| CDS CCA 72 bp | TTATCACACCATAACGCTCCAGAAGGGGATCGTTCATaGCTTCACGAAGTAGCATCCCGTCAGTCATATACT | + |
|
Preference number: 6 (lower is better) Translates to: LSHHNAPEGDRS*LHEVASRQSYT Trigger: AGTATATGACTGACGGGATGCTACTTCGTGAAGCCATGAACGATCCCCTTCTGGAGCGTTATGGTGTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
||
| CDS TCA 72 bp | GCATTTCTGTTTTATAAGCTTTCTCTGTATAAAGCCTaGAGCATTTCCCAGGTCTGGTCCGTCCAGCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: AFLFYKLSLYKA*SISQVWSVQLD Trigger: GTCGAGCTGGACGGACCAGACCTGGGAAATGCTTCAGGCTTTATACAGAGAAAGCTTATAAAACAGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031061.12 ENSMUST00000199321.5 ENSMUST00000200186.5 |
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| CDS CAA 72 bp | CCTCTTCACACATATGTATTTGGATCACTGTCCGAATaGCTGCTTCAAGATAATCTCTCTCTGGTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLHTYVFGSLSE*LLQDNLSLVLE Trigger: CTCCAGAACCAGAGAGAGATTATCTTGAAGCAGCAATTCGGACAGTGATCCAAATACATATGTGTGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031061.12 ENSMUST00000195922.2 ENSMUST00000199321.5 ENSMUST00000200186.5 |
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| CDS CAA 90 bp | CAAGAAAAGAAGAAGGTCTCCTTCCTCCTCTTCACACATATGTATTaGGATCACTGTCCGAATTGCTGCTTCAAGATAATCTCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QEKKKVSFLLFTHMY*DHCPNCCFKIISLW Trigger: CCAGAGAGAGATTATCTTGAAGCAGCAATTCGGACAGTGATCCAAATACATATGTGTGAAGAGGAGGAAGGAGACCTTCTTCTTTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031061.12 ENSMUST00000195922.2 ENSMUST00000199321.5 ENSMUST00000200186.5 |
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| CDS GCA 72 bp | CTCTTCACACATATGTATTTGGATCACTGTCCGAATTaGTGCTTCAAGATAATCTCTCTCTGGTTCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LFTHMYLDHCPN*CFKIISLWFWS Trigger: ACTCCAGAACCAGAGAGAGATTATCTTGAAGCAGCAATTCGGACAGTGATCCAAATACATATGTGTGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031061.12 ENSMUST00000195922.2 ENSMUST00000199321.5 ENSMUST00000200186.5 |
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| CDS GCA 72 bp | TTGAAGTTTGGCAATAATGCGGTCCAACTGTCTCTTTaGTTCACACTGTGGGAAATTGCTCATGTCATAATA | + |
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Preference number: 6 (lower is better) Translates to: LKFGNNAVQLSL*FTLWEIAHVII Trigger: TATTATGACATGAGCAATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGACCGCATTATTGCCAAACTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031061.12 |
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