Pregenerated sensors for DHRS9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027068Ensembl transcript IDs: ENSMUST00000063690.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGCTCAGTGGTGTAGCATGGGCCCATGCCCGAGATTCTGGATTTaGGCCTCCATGACAAAAAGAAGGGTGAAAGAAACCAGAGTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: VAQWCSMGPCPRFWI*ASMTKRRVKETRVR Trigger: CCTAACTCTGGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTCGGGCATGGGCCCATGCTACACCACTGAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 90 bp | TTCACGGTAACAGCAGTAGTGTGTCCTCTGTGTCCCTCTGGAGTATaGGGCTTGTATTGGCGTGTCCCCACCTTTCATTCCTTGTCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: FTVTAVVCPLCPSGV*GLYWRVPTFHSLSF Trigger: AAAAGACAAGGAATGAAAGGTGGGGACACGCCAATACAAGCCTCATACTCCAGAGGGACACAGAGGACACACTACTGCTGTTACCGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 90 bp | AAAAGGGTCAGTTTAGGGCAGGTGCTGACTGCCCTGAGTAGAAAATaGCAGAAGGTTGTGATGTCCTTGCCTGATCCGTTTCAGGTTACA | + |
|
Preference number: 1 (lower is better) Translates to: KRVSLGQVLTALSRK*QKVVMSLPDPFQVT Trigger: TGTAACCTGAAACGGATCAGGCAAGGACATCACAACCTTCTGTCATTTTCTACTCAGGGCAGTCAGCACCTGCCCTAAACTGACCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 90 bp | TACAGCAGTATTCTGAGCATGGGCTTTGGAATGAGACTGCCTGGGTaGGACTTAGCCCAAGATGACGAGCACTCTAAAATACAGAAATTT | + |
|
Preference number: 1 (lower is better) Translates to: YSSILSMGFGMRLPG*DLAQDDEHSKIQKF Trigger: AAATTTCTGTATTTTAGAGTGCTCGTCATCTTGGGCTAAGTCTCACCCAGGCAGTCTCATTCCAAAGCCCATGCTCAGAATACTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 90 bp | TCAATAAAGGAATTCCCTTGGGATTCTGCAAATCTTGGTAGTCTTTaGACATCGGGAAAGTCAAAGGGCAGTAAGCAAGCCACAGAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: SIKEFPWDSANLGSL*TSGKSKGSKQATES Trigger: AGACTCTGTGGCTTGCTTACTGCCCTTTGACTTTCCCGATGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 90 bp | AAGCTAGAAGATTTTAACTCTTGGCTTTGGGTGAGGAGAGGAGAGTaGAGGTCATTGTTGAGGTTAACAAAGGGCACTCACAAACAAATC | + |
|
Preference number: 1 (lower is better) Translates to: KLEDFNSWLWVRRGE*RSLLRLTKGTHKQI Trigger: GATTTGTTTGTGAGTGCCCTTTGTTAACCTCAACAATGACCTTCACTCTCCTCTCCTCACCCAAAGCCAAGAGTTAAAATCTTCTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 90 bp | AGCGATTGGATTAGCATGATTGGAAGATCAATAAAGGAATTCCCTTaGGATTCTGCAAATCTTGGTAGTCTTTGGACATCGGGAAAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: SDWISMIGRSIKEFP*DSANLGSLWTSGKS Trigger: TGACTTTCCCGATGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCTTCCAATCATGCTAATCCAATCGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR GCA 90 bp | CTTGTTCTTATCAAAGCTTATCAGAATGTATTGAGTCTTCTTCTCTaGCAGATAACAGAGCCATTGGATCCACTTATTAAAGACTTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: LVLIKAYQNVLSLLL*QITEPLDPLIKDFL Trigger: TAAGAAGTCTTTAATAAGTGGATCCAATGGCTCTGTTATCTGGCAGAGAAGAAGACTCAATACATTCTGATAAGCTTTGATAAGAACAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGGAGGTGCCAAGTCTCTaGAATCAGCCAATCTCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FCPSISSLFLTASQFIPVEVPSL*NQPISK Trigger: CTTCGAGATTGGCTGATTTCAGAGACTTGGCACCTC...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | GACTATTGTCCACAGTTTAGGGTACAGATCCATAGTGCAATCCTATCTGTCTCTTATCCAGGCACCAAGTaGGGCTGCGGATCTGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: DYCPQFRVQIHSAILSVSYPGTK*GCGSAS Trigger: AGATGCAGATCCGCAGCCCCACTTGGTGCCTGGATA...AGAGACAGATAGGATTGCACTATGGATCTGTACCCTAAACTGTGGACAATAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | GACTATTGTCCACAGTTTAGGGTACAGATCCATAGTGCAATCCTATCTGTCTCTCAGAACTGTCTCCTTTaGCAAGGATTCAGGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: DYCPQFRVQIHSAILSVSQNCLL*QGFRRP Trigger: TGGCCTCCTGAATCCTTGCCAAAGGAGACAGTTCTG...AGAGACAGATAGGATTGCACTATGGATCTGTACCCTAAACTGTGGACAATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | ACTATGTCACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGCAGAGTCTGAAGCCATaGGATGGAGCCAAGAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: TMSQEASANSPGILFFQLQSLKP*DGAKNL Trigger: CAGGTTCTTGGCTCCATCTCATGGCTTCAGACTCTG...CAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTGACATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATGCAAGCCACAGAGTCTaGAGCCATGAGATGGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FILRMFGHFYINEPVVSYASHRV*SHEMEP Trigger: TGGCTCCATCTCATGGCTTCAGACTCTGTGGCTTGC...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAAGCAATCTGGATTACTaGACCAGTCAGGGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HRKHLLIHQVYYFSSCDISNLDY*TSQGQV Trigger: TACCTGCCCCTGACTGGTTCAGTAATCCAGATTGCT...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATAGCCAATCTCGAAGCTaGGGGCAGGCATTTGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FILRMFGHFYINEPVVSYSQSRS*GQAFVV Trigger: AACCACAAATGCCTGCCCCCAGCTTCGAGATTGGCT...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAATGGAGCCAAGAACCTaGCCTTGTAATGAGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HRKHLLIHQVYYFSSCDIMEPRT*PCNEEQ Trigger: CTGCTCCTCATTACAAGGCCAGGTTCTTGGCTCCAT...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | ACTATGTCACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGGCCCTGAGTAGAAAATaGCAGAAGGTTGTGATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TMSQEASANSPGILFFQLALSRK*QKVVMS Trigger: GGACATCACAACCTTCTGTCATTTTCTACTCAGGGC...CAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTGACATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAACCCCCGAGAACTACTaGGATGAATACTGTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HRKHLLIHQVYYFSSCDITPENY*DEYCRE Trigger: TTCTCTACAGTATTCATCCCAGTAGTTCTCGGGGGT...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR GCA 90 bp | ACTATGTCACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTTGAGTCTTCTTCTCTaGCAGATAACAGAGCCATTG | + |
|
Preference number: 2 (lower is better) Translates to: TMSQEASANSPGILFFQLLSLLL*QITEPL Trigger: CAATGGCTCTGTTATCTGGCAGAGAAGAAGACTCAA...CAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTGACATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATATTTAAAAATAAATCCTaGACTGGGGTGTGGTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HRKHLLIHQVYYFSSCDIFKNKS*TGVWCS Trigger: GCTACACCACACCCCAGTTCAGGATTTATTTTTAAA...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATAGAATGAGATTGAGGTaGCAAGTCTCTGAAATCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FILRMFGHFYINEPVVSYRMRLR*QVSEIS Trigger: GCTGATTTCAGAGACTTGGCACCTCAATCTCATTCT...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGAAGCTGTTCATGTAAGGCATAGCAACTGTAAGACTATGTCACAGGAAATAAAGGAATTCCCTTaGGATTCTGCAAATCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LDEAVHVRHSNCKTMSQEIKEFP*DSANLG Trigger: ACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTAT...TTCCTGTGACATAGTCTTACAGTTGCTATGCCTTACATGAACAGCTTCATCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 72 bp | GGCCTTGTAATGAGGAGCAGCTGTAGCCAACAGAACTaGTGTGCTTCCGCTGTGATGCAGCTGACTGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLVMRSSCSQQN*CASAVMQLTDE Trigger: TTCATCAGTCAGCTGCATCACAGCGGAAGCACACCAGTTCTGTTGGCTACAGCTGCTCCTCATTACAAGGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 72 bp | TGGTGTAGCATGGGCCCATGCCCGAGATTCTGGATTTaGGCCTCCATGACAAAAAGAAGGGTGAAAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: WCSMGPCPRFWI*ASMTKRRVKET Trigger: GGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTCGGGCATGGGCCCATGCTACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 72 bp | ATTCTGAGCATGGGCTTTGGAATGAGACTGCCTGGGTaGGACTTAGCCCAAGATGACGAGCACTCTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: ILSMGFGMRLPG*DLAQDDEHSKI Trigger: TATTTTAGAGTGCTCGTCATCTTGGGCTAAGTCTCACCCAGGCAGTCTCATTCCAAAGCCCATGCTCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 72 bp | GATTTTAACTCTTGGCTTTGGGTGAGGAGAGGAGAGTaGAGGTCATTGTTGAGGTTAACAAAGGGCACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DFNSWLWVRRGE*RSLLRLTKGTH Trigger: GTGAGTGCCCTTTGTTAACCTCAACAATGACCTTCACTCTCCTCTCCTCACCCAAAGCCAAGAGTTAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR GCA 72 bp | TGGAAGAGATTCTCTTTCGTCTGGACAGTTTACATATaGAGCAGGCTCCTTCACAGTATCTCCGAACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: WKRFSFVWTVYI*SRLLHSISEPT Trigger: TGTTGGTTCGGAGATACTGTGAAGGAGCCTGCTGCATATGTAAACTGTCCAGACGAAAGAGAATCTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 72 bp | TTCTTTATCATACAGCAGTATTCTGAGCATGGGCTTTaGAATGAGACTGCCTGGGTGAGACTTAGCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FFIIQQYSEHGL*NETAWVRLSPR Trigger: TCTTGGGCTAAGTCTCACCCAGGCAGTCTCATTCCAAAGCCCATGCTCAGAATACTGCTGTATGATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGGCTTATCAGAATGTATaGAGTCTTCTTCTCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCPSISSLFLTASQFIPVAYQNV*SLLLCQ Trigger: CTGGCAGAGAAGAAGACTCAATACATTCTGATAAGC...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 72 bp | CATCTTTCTCAGGCTGGTATCCCTAAGGAGAGAGCTTaGAAATTGTTAAACTACAGACTGCAGCAATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HLSQAGIPKERA*KLLNYRLQQCS Trigger: AGAGCATTGCTGCAGTCTGTAGTTTAACAATTTCCAAGCTCTCTCCTTAGGGATACCAGCCTGAGAAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR TCA 72 bp | TCAGGTAAAGCTTCAGTATCTGGCAAGACTGGCTTATaGGATAGGCCTTCTCTGTCCTTATTTTCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGKASVSGKTGL*DRPSLSLFSQK Trigger: CTTCTGTGAAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAGCTTTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATGAAGCTGTTCATGTAAGGCATAGCAACTGTAAGACTATGTCACAGGAAAGCAGCACACCTATTTaGGATGGAGAAGTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LDEAVHVRHSNCKTMSQESSTPI*DGEVFP Trigger: TGGAAAGACTTCTCCATCCAAAATAGGTGTGCTGCT...TTCCTGTGACATAGTCTTACAGTTGCTATGCCTTACATGAACAGCTTCATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAAATAAAGGAATTCCCTaGGGATTCTGCAAATCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HRKHLLIHQVYYFSSCDINKGIP*GFCKSW Trigger: CCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATT...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAGCAGAGTTTTTCATTTaGCGAATGTTTGGCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: HRKHLLIHQVYYFSSCDIAEFFI*RMFGHF Trigger: GAAATGGCCAAACATTCGCAAAATGAAAAACTCTGC...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 72 bp | ATTAGCATGATTGGAAGATCAATAAAGGAATTCCCTTaGGATTCTGCAAATCTTGGTAGTCTTTGGACATCG | + |
|
Preference number: 3 (lower is better) Translates to: ISMIGRSIKEFP*DSANLGSLWTS Trigger: CGATGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCTTCCAATCATGCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CCA 72 bp | AGGCAAAACAGAGACAGAATTAGAAGGTTGAGCGATTaGATTAGCATGATTGGAAGATCAATAAAGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RQNRDRIRRLSD*ISMIGRSIKEF Trigger: GAATTCCTTTATTGATCTTCCAATCATGCTAATCCAATCGCTCAACCTTCTAATTCTGTCTCTGTTTTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR GCA 72 bp | ATCAAAGCTTATCAGAATGTATTGAGTCTTCTTCTCTaGCAGATAACAGAGCCATTGGATCCACTTATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKAYQNVLSLLL*QITEPLDPLIK Trigger: TTTAATAAGTGGATCCAATGGCTCTGTTATCTGGCAGAGAAGAAGACTCAATACATTCTGATAAGCTTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGGGCAGGTAGCAGCACACCTATTTTGGATGGAGAAGTCTTTCCATTTCCCCTTTTCTCCTACATaGCTCTTCACCCACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGQVAAHLFWMEKSFHFPFSPT*LFTHWA Trigger: GGCCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGG...GAAATGGAAAGACTTCTCCATCCAAAATAGGTGTGCTGCTACCTGCCCCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| 3UTR CAA 72 bp | GGCACACTGCTAACACAGATGCTGCAGCTGGCAAGCTaGCGCTCAATGGTAGACTGCATGACACTTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLLTQMLQLAS*RSMVDCMTLSF Trigger: AAAACTAAGTGTCATGCAGTCTACCATTGAGCGCAAGCTTGCCAGCTGCAGCATCTGTGTTAGCAGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGAAACCAGAGTTAGGGGCAAGTGTAACAGAACTGTCTCCTTTGGCAAGCTGCCAGCTCTGTTTTaGACAGCCCTGGTTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VKETRVRGKCNRTVSFGKLPALF*TALVQC Trigger: GCATTGAACCAGGGCTGTTCAAAACAGAGCTGGCAG...CTTGCCAAAGGAGACAGTTCTGTTACACTTGCCCCTAACTCTGGTTTCTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGAAACCAGAGTTAGGGGCAAGTGTAACAGAACTGTCTCCTTTGGCAAGTGGCTCTTCACCCACTaGGCCGTCTTCTTGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: VKETRVRGKCNRTVSFGKWLFTH*AVFLTF Trigger: GAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCA...CTTGCCAAAGGAGACAGTTCTGTTACACTTGCCCCTAACTCTGGTTTCTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGGGCAGGTAGCAGCACACCTATTTTGGATGGAGAAGTCTTTCCATTTCAGACTTGTTAGAGCGTaGTCCATGCACCCTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQGQVAAHLFWMEKSFHFRLVRA*SMHPTT Trigger: AGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCT...GAAATGGAAAGACTTCTCCATCCAAAATAGGTGTGCTGCTACCTGCCCCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGAAACCAGAGTTAGGGGCAAGTGTAACAGAACTGTCTCCTTTGGCAAGCCCTGGTTCAATGCATaGGACATGCACACCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKETRVRGKCNRTVSFGKPWFNA*DMHTKS Trigger: GCTTTTGGTGTGCATGTCTCATGCATTGAACCAGGG...CTTGCCAAAGGAGACAGTTCTGTTACACTTGCCCCTAACTCTGGTTTCTTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | GACTATTGTCCACAGTTTAGGGTACAGATCCATAGTGCAATCCTATCTGTCTCTCATTCTCTGGGTCAGTaGCATCCAGAAGCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DYCPQFRVQIHSAILSVSHSLGQ*HPEARC Trigger: ACACCGTGCTTCTGGATGTCACTGACCCAGAGAATG...AGAGACAGATAGGATTGCACTATGGATCTGTACCCTAAACTGTGGACAATAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGACAGCCCTGGTTCAATaGATGAGACATGCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCPSISSLFLTASQFIPVTALVQ*MRHAHQ Trigger: TTGGTGTGCATGTCTCATGCATTGAACCAGGGCTGT...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGAAAACTGCTGGCATGTaGGACAGAGGTATCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCPSISSLFLTASQFIPVKTAGM*DRGIQN Trigger: ATTCTGGATACCTCTGTCTCACATGCCAGCAGTTTT...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTACTCAGAGCTTAACAGAAGTGCAGCTGGCACACTGCTAACACAGATGCTTGTCAGCAATGTCTaGTATCTTCAACTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKYSELNRSAAGTLLTQMLVSNV*YLQLPF Trigger: AAAGGGCAGTTGAAGATAGCAGACATTGCTGACAAG...CATCTGTGTTAGCAGTGTGCCAGCTGCACTTCTGTTAAGCTCTGAGTACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTATCTGGCAAGACTGGCTTATGAGATAGGCCTTCTCTGTCCTTATTTTTTAGAGCGTGGTCCATaGACCCTACCACTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLARLAYEIGLLCPYFLERGP*TLPLER Trigger: TCTCTCTAGTGGTAGGGTGCATGGACCACGCTCTAA...AAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTATCTGGCAAGACTGGCTTATGAGATAGGCCTTCTCTGTCCTTATTTTTCCAGAAGCACGGTGTaGAGTCTCTCTGAGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQYLARLAYEIGLLCPYFSRSTV*SLSEVL Trigger: CAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGA...AAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | ACTATGTCACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGGGTGTGGAGTCTCTCTaGGGTTTTGGCCTTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSQEASANSPGILFFQLGVESL*GFGLQS Trigger: GCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACC...CAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTGACATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | AGATCAATAAAGGAATTCCCTTGGGATTCTGCAAATCTTGGTAGTCTTTGGACAGAACACCAGCATTATTaGTCAGACCCCAGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSIKEFPWDSANLGSLWTEHQHY*SDPRDP Trigger: AGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTC...TGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGATTGAAACCCTCCACTaGGTATTTGGATGGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: FCPSISSLFLTASQFIPVIETLH*VFGWSI Trigger: TATACTCCATCCAAATACGCAGTGGAGGGTTTCAAT...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATCCTCCACTGCGTATTTaGATGGAGTATAGCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FILRMFGHFYINEPVVSYPPLRI*MEYSPL Trigger: GAGGGGGCTATACTCCATCCAAATACGCAGTGGAGG...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | GAGATTCTGGATTTGAGCCTCCATGACAAAAAGAAGGGTGAAAGAAACCAGAGTCAATGTACCGAGTCTTaGGGAAGAGACTTGTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EILDLSLHDKKKGERNQSQCTES*GRDLLE Trigger: CTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTG...ACTCTGGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTATCTGGCAAGACTGGCTTATGAGATAGGCCTTCTCTGTCCTTATTTTCACAGCTTTGGGATTTaGCAGCTCTACTTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQYLARLAYEIGLLCPYFHSFGI*QLYFLF Trigger: AAACAGAAAGTAGAGCTGGCAAATCCCAAAGCTGTG...AAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | AGATCAATAAAGGAATTCCCTTGGGATTCTGCAAATCTTGGTAGTCTTTGGACAGTCTCTCTGAGGTTTTaGCCTTCAAAGCAGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSIKEFPWDSANLGSLWTVSLRF*PSKQLI Trigger: GATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGAC...TGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTATCTGGCAAGACTGGCTTATGAGATAGGCCTTCTCTGTCCTTATTTTGTATCCAGAATGTCTTaGCATCTTTCCCAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQYLARLAYEIGLLCPYFVSRMS*HLSQQC Trigger: ACATTGCTGGGAAAGATGCCAAGACATTCTGGATAC...AAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | AGATCAATAAAGGAATTCCCTTGGGATTCTGCAAATCTTGGTAGTCTTTGGACACTTCTTGACATTCTCTaGGTCAGTGACATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSIKEFPWDSANLGSLWTLLDIL*VSDIQK Trigger: CTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAG...TGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | GAGATTCTGGATTTGAGCCTCCATGACAAAAAGAAGGGTGAAAGAAACCAGAGTTTCAGTTGTCTTGATTaGATCTGCCAGCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EILDLSLHDKKKGERNQSFSCLD*ICQLCF Trigger: AAAACAGAGCTGGCAGATCCAATCAAGACAACTGAA...ACTCTGGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR TCA 90 bp | GAGATTCTGGATTTGAGCCTCCATGACAAAAAGAAGGGTGAAAGAAACCAGAGTCTCCATATTGTTGTTTaGTATCTGGAGACAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EILDLSLHDKKKGERNQSLHIVV*YLETDV Trigger: AACATCTGTCTCCAGATATCAAACAACAATATGGAG...ACTCTGGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CCA 90 bp | AGATCAATAAAGGAATTCCCTTGGGATTCTGCAAATCTTGGTAGTCTTTGGACATTTTATCAAAAGTTCTaGCTGCTAAGTTTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSIKEFPWDSANLGSLWTFYQKF*LLSFQS Trigger: GCTTTGGAAACTTAGCAGCCAGAACTTTTGATAAAA...TGTCCAAAGACTACCAAGATTTGCAGAATCCCAAGGGAATTCCTTTATTGATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS GCA 90 bp | ACCCTCCACTGCGTATTTGGATGGAGTATAGCCCCCTCCACCAAATaGAAGCCGGCCTCCAATGCTGGAGACATTGATAACACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLHCVFGWSIAPSTK*KPASNAGDIDNTPS Trigger: CGAGGGCGTGTTATCAATGTCTCCAGCATTGGAGGCCGGCTTGCATTTGGTGGAGGGGGCTATACTCCATCCAAATACGCAGTGGAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 90 bp | ATCAGACCCCAGAGACCCTTTTCTCCTACATGGCTCTTCACCCACTaGGCCGTCTTCTTGACATTCTCTGGGTCAGTGACATCCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRPQRPFSPTWLFTH*AVFLTFSGSVTSRS Trigger: GCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 90 bp | TTCCCAGCAATGTACCGAGTCTTGGGGAAGAGACTTGTTAGAGCGTaGTCCATGCACCCTACCACTAGAGAGAGGTCCAAGTTCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FPAMYRVLGKRLVRA*SMHPTTRERSKFTE Trigger: CTCGGTGAACTTGGACCTCTCTCTAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTGCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS TCA 90 bp | TCAACCAGTCAGTGGGAGCCAACACGCCAAGAACACCAGCATTATTaGTCAGACCCCAGAGACCCTTTTCTCCTACATGGCTCTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: STSQWEPTRQEHQHY*SDPRDPFLLHGSSP Trigger: GGGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCTTGGCGTGTTGGCTCCCACTGACTGGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS GCA 90 bp | CAATGTACCGAGTCTTGGGGAAGAGACTTGTTAGAGCGTGGTCCATaGACCCTACCACTAGAGAGAGGTCCAAGTTCACCGAGGAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QCTESWGRDLLERGP*TLPLERGPSSPRRY Trigger: ATACCTCCTCGGTGAACTTGGACCTCTCTCTAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 90 bp | GTCTTCTTGACATTCTCTGGGTCAGTGACATCCAGAAGCACGGTGTaGAGTCTCTCTGAGGTTTTGGCCTTCAAAGCAGCTGATCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFLTFSGSVTSRSTV*SLSEVLAFKAADPD Trigger: GTCAGGATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 90 bp | GTATCCAGAATGTCTTGGCATCTTTCCCAGCAATGTACCGAGTCTTaGGGAAGAGACTTGTTAGAGCGTGGTCCATGCACCCTACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: VSRMSWHLSQQCTES*GRDLLERGPCTLPL Trigger: TAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTGCTGGGAAAGATGCCAAGACATTCTGGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 90 bp | CTTGTAAAACTGCTGGCATGTGAGACAGAGGTATCCAGAATGTCTTaGCATCTTTCCCAGCAATGTACCGAGTCTTGGGGAAGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVKLLACETEVSRMS*HLSQQCTESWGRDL Trigger: CAAGTCTCTTCCCCAAGACTCGGTACATTGCTGGGAAAGATGCCAAGACATTCTGGATACCTCTGTCTCACATGCCAGCAGTTTTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTATCTGGCAAGACTGGCTTATGAGATAGGCCTTCTCTGTCCTTATTTTCACTGGGCCGTCTTCTaGACATTCTCTGGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQYLARLAYEIGLLCPYFHWAVF*TFSGSV Trigger: CACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTG...AAAATAAGGACAGAGAAGGCCTATCTCATAAGCCAGTCTTGCCAGATACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGAAACCAGAGTTAGGGGCAAGTGTAACAGAACTGTCTCCTTTGGCAAGAGAACACCAGCATTATaGATCAGACCCCAGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: VKETRVRGKCNRTVSFGKRTPAL*IRPQRP Trigger: GGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCT...CTTGCCAAAGGAGACAGTTCTGTTACACTTGCCCCTAACTCTGGTTTCTTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGAAACCAGAGTTAGGGGCAAGTGTAACAGAACTGTCTCCTTTGGCAAGCGCCCTCGAGCTTTTTaGACCAGTGGAAGCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: VKETRVRGKCNRTVSFGKRPRAF*TSGSIF Trigger: GAATATGCTTCCACTGGTCAAAAAAGCTCGAGGGCG...CTTGCCAAAGGAGACAGTTCTGTTACACTTGCCCCTAACTCTGGTTTCTTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGAGTCTCTCTGAGGTTTaGGCCTTCAAAGCAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCPSISSLFLTASQFIPVSLSEV*AFKAAD Trigger: ATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGACT...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | GACTATTGTCCACAGTTTAGGGTACAGATCCATAGTGCAATCCTATCTGTCTCTTCTTGGGGAAGAGACTaGTTAGAGCGTGGTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DYCPQFRVQIHSAILSVSSWGRD*LERGPC Trigger: GCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGA...AGAGACAGATAGGATTGCACTATGGATCTGTACCCTAAACTGTGGACAATAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGGGTATCCAGAATGTCTaGGCATCTTTCCCAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FCPSISSLFLTASQFIPVGIQNV*ASFPAM Trigger: CATTGCTGGGAAAGATGCCAAGACATTCTGGATACC...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCCTTCTATTTCTTCCCTGTTTCTAACCGCCTCTCAGTTCATACCAGTGACACAGCTTTGGGATTaGCCAGCTCTACTTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCPSISSLFLTASQFIPVTQLWD*PALLSV Trigger: AACAGAAAGTAGAGCTGGCAAATCCCAAAGCTGTGT...CACTGGTATGAACTGAGAGGCGGTTAGAAACAGGGAAGAAATAGAAGGGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | GAGATTCTGGATTTGAGCCTCCATGACAAAAAGAAGGGTGAAAGAAACCAGAGTGCAATGTACCGAGTCTaGGGGAAGAGACTTGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: EILDLSLHDKKKGERNQSAMYRV*GKRLVR Trigger: TCTAACAAGTCTCTTCCCCAAGACTCGGTACATTGC...ACTCTGGTTTCTTTCACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTCCATTTCTCTTTCATCTTACCAATCAGGTAAAGCTTCAGTATCTGGCTCTGCCAGCTCTGTTTaGAACAGCCCTGGTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLSISLSSYQSGKASVSGSASSV*NSPGSM Trigger: CATTGAACCAGGGCTGTTCAAAACAGAGCTGGCAGA...GCCAGATACTGAAGCTTTACCTGATTGGTAAGATGAAAGAGAAATGGAAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | CACAGGAAGCATCTGCTAATTCACCAGGTATATTATTTTTCCAGCTGTGACATAGTGATGAAGACATACTaGTCAGCAATGTCTGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HRKHLLIHQVYYFSSCDIVMKTY*SAMSAI Trigger: GATAGCAGACATTGCTGACAAGTATGTCTTCATCAC...TATGTCACAGCTGGAAAAATAATATACCTGGTGAATTAGCAGATGCTTCCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATGCCCTCTCCATATTGTaGTTTGATATCTGGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FILRMFGHFYINEPVVSYALSIL*FDIWRQ Trigger: CTGTCTCCAGATATCAAACAACAATATGGAGAGGGC...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTCCATTTCTCTTTCATCTTACCAATCAGGTAAAGCTTCAGTATCTGGCGTAGCCCTCTCCATATaGTTGTTTGATATCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSISLSSYQSGKASVSGVALSI*LFDIWR Trigger: TCTCCAGATATCAAACAACAATATGGAGAGGGCTAC...GCCAGATACTGAAGCTTTACCTGATTGGTAAGATGAAAGAGAAATGGAAAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTCCATTTCTCTTTCATCTTACCAATCAGGTAAAGCTTCAGTATCTGGCATATTCAGTGTCACGTaGATGAGTCCAAACAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSISLSSYQSGKASVSGIFSVT*MSPNRL Trigger: TAACCTGTTTGGACTCATCAACGTGACACTGAATAT...GCCAGATACTGAAGCTTTACCTGATTGGTAAGATGAAAGAGAAATGGAAAGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTGCGAATGTTTGGCCATTTCTACATAAATGAGCCTGTGGTGTCTTATTCTCCATATTGTTGTTaGATATCTGGAGACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: FILRMFGHFYINEPVVSYSPYCC*ISGDRC Trigger: ACATCTGTCTCCAGATATCAAACAACAATATGGAGA...ATAAGACACCACAGGCTCATTTATGTAGAAATGGCCAAACATTCGCAAAATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 90 bp | GGGTCAGTGACATCCAGAAGCACGGTGTGGAGTCTCTCTGAGGTTTaGGCCTTCAAAGCAGCTGATCCTGACTCAGTCAGGCAGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSVTSRSTVWSLSEV*AFKAADPDSVRQAA Trigger: TGCTGCCTGCCTGACTGAGTCAGGATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATGTCACTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | GCTCTTCACCCACTGGGCCGTCTTCTTGACATTCTCTaGGTCAGTGACATCCAGAAGCACGGTGTGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALHPLGRLLDIL*VSDIQKHGVES Trigger: AGACTCCACACCGTGCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS GCA 72 bp | GAGTCTTGGGGAAGAGACTTGTTAGAGCGTGGTCCATaGACCCTACCACTAGAGAGAGGTCCAAGTTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ESWGRDLLERGP*TLPLERGPSSP Trigger: CGGTGAACTTGGACCTCTCTCTAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | CATCCAGAAGCACGGTGTGGAGTCTCTCTGAGGTTTTaGCCTTCAAAGCAGCTGATCCTGACTCAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPEARCGVSLRF*PSKQLILTQSG Trigger: GCCTGACTGAGTCAGGATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 72 bp | TCTCCTACATGGCTCTTCACCCACTGGGCCGTCTTCTaGACATTCTCTGGGTCAGTGACATCCAGAAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SPTWLFTHWAVF*TFSGSVTSRST Trigger: CGTGCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCATGTAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 90 bp | AGACCCTTTTCTCCTACATGGCTCTTCACCCACTGGGCCGTCTTCTaGACATTCTCTGGGTCAGTGACATCCAGAAGCACGGTGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPFSPTWLFTHWAVF*TFSGSVTSRSTVWS Trigger: ACTCCACACCGTGCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS TCA 72 bp | CAGTGGGAGCCAACACGCCAAGAACACCAGCATTATTaGTCAGACCCCAGAGACCCTTTTCTCCTACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: QWEPTRQEHQHY*SDPRDPFLLHG Trigger: GCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCTTGGCGTGTTGGCTCCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | CAGAGACCCTTTTCTCCTACATGGCTCTTCACCCACTaGGCCGTCTTCTTGACATTCTCTGGGTCAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: QRPFSPTWLFTH*AVFLTFSGSVT Trigger: TGTCACTGACCCAGAGAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 72 bp | ACATCCAGAAGCACGGTGTGGAGTCTCTCTGAGGTTTaGGCCTTCAAAGCAGCTGATCCTGACTCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSRSTVWSLSEV*AFKAADPDSVR Trigger: CCTGACTGAGTCAGGATCAGCTGCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 72 bp | CTTTCCCAGCAATGTACCGAGTCTTGGGGAAGAGACTaGTTAGAGCGTGGTCCATGCACCCTACCACTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSQQCTESWGRD*LERGPCTLPLE Trigger: CTCTAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTGCTGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 90 bp | GTCAACCAGTCAGTGGGAGCCAACACGCCAAGAACACCAGCATTATaGATCAGACCCCAGAGACCCTTTTCTCCTACATGGCTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VNQSVGANTPRTPAL*IRPQRPFSPTWLFT Trigger: GGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCTTGGCGTGTTGGCTCCCACTGACTGGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 90 bp | GGTATCCAGAATGTCTTGGCATCTTTCCCAGCAATGTACCGAGTCTaGGGGAAGAGACTTGTTAGAGCGTGGTCCATGCACCCTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GIQNVLASFPAMYRV*GKRLVRAWSMHPTT Trigger: AGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGGTACATTGCTGGGAAAGATGCCAAGACATTCTGGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS GCA 72 bp | TGCGTATTTGGATGGAGTATAGCCCCCTCCACCAAATaGAAGCCGGCCTCCAATGCTGGAGACATTGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: CVFGWSIAPSTK*KPASNAGDIDN Trigger: GTTATCAATGTCTCCAGCATTGGAGGCCGGCTTGCATTTGGTGGAGGGGGCTATACTCCATCCAAATACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | ACATTCTCTGGGTCAGTGACATCCAGAAGCACGGTGTaGAGTCTCTCTGAGGTTTTGGCCTTCAAAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFSGSVTSRSTV*SLSEVLAFKAA Trigger: AGCTGCTTTGAAGGCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATGTCACTGACCCAGAGAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | CTGCTGGCATGTGAGACAGAGGTATCCAGAATGTCTTaGCATCTTTCCCAGCAATGTACCGAGTCTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLACETEVSRMS*HLSQQCTESWG Trigger: TCCCCAAGACTCGGTACATTGCTGGGAAAGATGCCAAGACATTCTGGATACCTCTGTCTCACATGCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 72 bp | TCAGTGGGAGCCAACACGCCAAGAACACCAGCATTATaGATCAGACCCCAGAGACCCTTTTCTCCTACATGG | + |
|
Preference number: 6 (lower is better) Translates to: SVGANTPRTPAL*IRPQRPFSPTW Trigger: CCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCTTGGCGTGTTGGCTCCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CCA 72 bp | TTATTGATCAGACCCCAGAGACCCTTTTCTCCTACATaGCTCTTCACCCACTGGGCCGTCTTCTTGACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LLIRPQRPFSPT*LFTHWAVFLTF Trigger: GAATGTCAAGAAGACGGCCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS TCA 72 bp | TGCCAGCTCTGTTTTGAACAGCCCTGGTTCAATGCATaGGACATGCACACCAAAAGCTTTCATATCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CQLCFEQPWFNA*DMHTKSFHIPP Trigger: AGGCGGGATATGAAAGCTTTTGGTGTGCATGTCTCATGCATTGAACCAGGGCTGTTCAAAACAGAGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||
| CDS CAA 72 bp | TTTTCAGTTGTCTTGATTGGATCTGCCAGCTCTGTTTaGAACAGCCCTGGTTCAATGCATGAGACATGCACA | + |
|
Preference number: 6 (lower is better) Translates to: FSVVLIGSASSV*NSPGSMHETCT Trigger: TGTGCATGTCTCATGCATTGAACCAGGGCTGTTCAAAACAGAGCTGGCAGATCCAATCAAGACAACTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063690.4 |
||