Pregenerated sensors for DHRS7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042569Ensembl transcript IDs: ENSMUST00000042281.14, ENSMUST00000108718.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCTCATAGAAAGAGACCTGCTGTGTACCTGTGCTACCCAGGGGTaGGAGTCAGACCATCTGAGACACCTGCTCATCCGTGAGCGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: FLIERDLLCTCATQG*ESDHLRHLLIRERC Trigger: GCAGCGCTCACGGATGAGCAGGTGTCTCAGATGGTCTGACTCGCACCCCTGGGTAGCACAGGTACACAGCAGGTCTCTTTCTATGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR CCA 90 bp | ACCTCATGCCTTTTTCATAAGTCAGAGGTGGCCAGACGGTGGTGGTaGTGCGATAGTGGTGGCTTGATGGTGGTGGCGCACGCCTTTAAT | + |
|
Preference number: 1 (lower is better) Translates to: TSCLFHKSEVARRWW*CDSGGLMVVAHAFN Trigger: ATTAAAGGCGTGCGCCACCACCATCAAGCCACCACTATCGCACCACCACCACCGTCTGGCCACCTCTGACTTATGAAAAAGGCATGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR CCA 90 bp | ATAGGGATGGGGGTGGTACACAACTTTAATCCCAGCCCTGGGAGTTaGGGGACAGAGGCAAGTGGATTCTTGAGTTTAAGGCCAGCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: IGMGVVHNFNPSPGS*GTEASGFLSLRPAW Trigger: CCAAGCTGGCCTTAAACTCAAGAATCCACTTGCCTCTGTCCCCCAACTCCCAGGGCTGGGATTAAAGTTGTGTACCACCCCCATCCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR CCA 90 bp | AACATCCTTCCACACTCACCCACTTTCTACAGTAAGAGCAGGACCTaGGACCATCTTAAGACTACCAGCCTTCTCCCTCAGGCCTCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: NILPHSPTFYSKSRT*DHLKTTSLLPQASS Trigger: GGAAGAGGCCTGAGGGAGAAGGCTGGTAGTCTTAAGATGGTCCCAGGTCCTGCTCTTACTGTAGAAAGTGGGTGAGTGTGGAAGGATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR GCA 90 bp | ATCAGTATGGAAGTTTCTCATAGAAAGAGACCTGCTGTGTACCTGTaGTACCCAGGGGTGCGAGTCAGACCATCTGAGACACCTGCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: ISMEVSHRKRPAVYL*YPGVRVRPSETPAH Trigger: ATGAGCAGGTGTCTCAGATGGTCTGACTCGCACCCCTGGGTAGCACAGGTACACAGCAGGTCTCTTTCTATGAGAAACTTCCATACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR TCA 90 bp | TGGCCTCCAATAAGCCAAACTAAGAGCAGATTTGAGAAGGTAGGATaGATAGGGATGGGGGTGGTACACAACTTTAATCCCAGCCCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: WPPISQTKSRFEKVG*IGMGVVHNFNPSPG Trigger: CCCAGGGCTGGGATTAAAGTTGTGTACCACCCCCATCCCTATTCATCCTACCTTCTCAAATCTGCTCTTAGTTTGGCTTATTGGAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR-3UTR GCA 90 bp | CACACTCTGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGGCTGGTCGCGGATCCCGTGCACTaGAATCCCCACCCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HTLEAEAGRSLEFEARLVADPVH*NPHPGR Trigger: CCTTCCTGGGTGGGGATTGCAGTGCACGGGATCCGC...GACCAGCCTGGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCTCCAGAGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGCCTTTAATCCCCCACACTCTGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTCCCAGCCCTGGGAGTTaGGGGACAGAGGCAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TPLIPHTLEAEAGRSLEFPSPGS*GTEASG Trigger: TCCACTTGCCTCTGTCCCCCAACTCCCAGGGCTGGG...AAACTCAAGAGATCTGCCTGCCTCTGCCTCCAGAGTGTGGGGGATTAAAGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGCTGGTGCTATTATGCCTGGTCCCCAAACCTCCAGAACCACTTCCGAAACATGGTTCTTCTACTGTaGACTCTGACCCACTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: WGWCYYAWSPNLQNHFRNMVLLL*TLTHSS Trigger: TGAAGAGTGGGTCAGAGTTCACAGTAGAAGAACCAT...GTTTCGGAAGTGGTTCTGGAGGTTTGGGGACCAGGCATAATAGCACCAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGTCATTAAGAAAACAGCAAACGCTGGCCTGGATGTGGGCAAAGGGAACTGGGGACAGAGGCAAGTaGATTCTTGAGTTTAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SQSLRKQQTLAWMWAKGTGDRGK*ILEFKA Trigger: GGCCTTAAACTCAAGAATCCACTTGCCTCTGTCCCC...AGTTCCCTTTGCCCACATCCAGGCCAGCGTTTGCTGTTTTCTTAATGACTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGCAAGTGGATTCTTGAGTTTAAGGCCAGCTTGGTCTACAGAGTGAGTTCCATGGTTCTTCTACTGTaGACTCTGACCCACTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RGKWILEFKASLVYRVSSMVLLL*TLTHSS Trigger: TGAAGAGTGGGTCAGAGTTCACAGTAGAAGAACCAT...GGAACTCACTCTGTAGACCAAGCTGGCCTTAAACTCAAGAATCCACTTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGGAGGAGGAGGTAATGCTCAACGCACAATGTTTATCTGTTCATTTTAAAAGTAAGAGCAGGACCTaGGACCATCTTAAGACTACC | + |
|
Preference number: 2 (lower is better) Translates to: DREEEVMLNAQCLSVHFKSKSRT*DHLKTT Trigger: GGTAGTCTTAAGATGGTCCCAGGTCCTGCTCTTACT...TTTAAAATGAACAGATAAACATTGTGCGTTGAGCATTACCTCCTCCTCCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAAAGTCAGTCATTAAGAAAACAGCAAACGCTGGCCTGGATGTGGGCAAAGACCACTACCCAGCTTTaGCTTTCTTCAGTTATTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQSQSLRKQQTLAWMWAKTTTQL*LSSVIK Trigger: TTTAATAACTGAAGAAAGTCAAAGCTGGGTAGTGGT...CTTTGCCCACATCCAGGCCAGCGTTTGCTGTTTTCTTAATGACTGACTTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR GCA 72 bp | GCCCTCCACCAGGTCTTAGCGGCGGATCCCGTGCACTaGAATCCCCACCCAGGAAGGTGTGGTAGTCGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALHQVLAADPVH*NPHPGRCGSRS Trigger: AGACCGACTACCACACCTTCCTGGGTGGGGATTGCAGTGCACGGGATCCGCCGCTAAGACCTGGTGGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR GCA 72 bp | CTAGCTCTTCCTGGAATTGGGGCACCGCCTGAGCAGTaGAACCCCAGCCGACATCTGCAGTCTGAGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LALPGIGAPPEQ*NPSRHLQSECL Trigger: AAGGCACTCAGACTGCAGATGTCGGCTGGGGTTGCACTGCTCAGGCGGTGCCCCAATTCCAGGAAGAGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR TCA 72 bp | GTACCTGTGCTACCCAGGGGTGCGAGTCAGACCATCTaGGACACCTGCTCATCCGTGAGCGCTGCAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: VPVLPRGASQTI*DTCSSVSAAAI Trigger: TATTGCTGCAGCGCTCACGGATGAGCAGGTGTCTCAGATGGTCTGACTCGCACCCCTGGGTAGCACAGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR CCA 72 bp | CATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGTTaGCTGCTCTCCAACAGGCTCACCTCAGCTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HATPEPSSNSPC*LLSNRLTSAWN Trigger: ATTCCAAGCTGAGGTGAGCCTGTTGGAGAGCAGCCAACAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR CCA 72 bp | CCACACTCACCCACTTTCTACAGTAAGAGCAGGACCTaGGACCATCTTAAGACTACCAGCCTTCTCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PHSPTFYSKSRT*DHLKTTSLLPQ Trigger: CTGAGGGAGAAGGCTGGTAGTCTTAAGATGGTCCCAGGTCCTGCTCTTACTGTAGAAAGTGGGTGAGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR GCA 72 bp | GAAGTTTCTCATAGAAAGAGACCTGCTGTGTACCTGTaGTACCCAGGGGTGCGAGTCAGACCATCTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EVSHRKRPAVYL*YPGVRVRPSET Trigger: TGTCTCAGATGGTCTGACTCGCACCCCTGGGTAGCACAGGTACACAGCAGGTCTCTTTCTATGAGAAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR TCA 72 bp | ACAGGACCAGGGGAGAGGACTCGGGGGAATTCTTCCTaGTTGCTAAAGTTGGCACTACATAGGATACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TGPGERTRGNSS*LLKLALHRIHQ Trigger: TTGGTGTATCCTATGTAGTGCCAACTTTAGCAATCAGGAAGAATTCCCCCGAGTCCTCTCCCCTGGTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR GCA 72 bp | GTGAGCGCTGCAGCAATAATCACAATAGCTAAGCTATaGAACCAGCCTAGGTGTCCAACACCAGACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSAAAIITIAKL*NQPRCPTPDRK Trigger: TTTCCTGTCTGGTGTTGGACACCTAGGCTGGTTGCATAGCTTAGCTATTGTGATTATTGCTGCAGCGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR CCA 72 bp | CAAAGTCAGTCATTAAGAAAACAGCAAACGCTGGCCTaGATGTGGGCAAAGGGAACTCTTACACACTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QSQSLRKQQTLA*MWAKGTLTHCC Trigger: ACAGCAGTGTGTAAGAGTTCCCTTTGCCCACATCCAGGCCAGCGTTTGCTGTTTTCTTAATGACTGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR TCA 72 bp | ATAAGCCAAACTAAGAGCAGATTTGAGAAGGTAGGATaGATAGGGATGGGGGTGGTACACAACTTTAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISQTKSRFEKVG*IGMGVVHNFNP Trigger: GGGATTAAAGTTGTGTACCACCCCCATCCCTATTCATCCTACCTTCTCAAATCTGCTCTTAGTTTGGCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR GCA 72 bp | CATGAAAACTGTTCATCTCATTATGCATCAGAGCAATaGAGGTCAGACATCTCACTTCAGTTACAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HENCSSHYASEQ*RSDISLQLQSQ Trigger: CTGACTTTGTAACTGAAGTGAGATGTCTGACCTGCATTGCTCTGATGCATAATGAGATGAACAGTTTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| 3UTR TCA 72 bp | CAGAAGACCTGTACATGGTTCTTCTACTGTGAACTCTaGCCCACTCTTCAGTCATTTATTTTACATCGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QKTCTWFFYCEL*PTLQSFILHRL Trigger: TAAACGATGTAAAATAAATGACTGAAGAGTGGGTCAGAGTTCACAGTAGAAGAACCATGTACAGGTCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | CACACTCTGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGGCTGGTCCTGAGGTGGCGCCCGTaGCTACCACCACAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLEAEAGRSLEFEARLVLRWRP*LPPQHS Trigger: GGAATGCTGTGGTGGTAGTCACGGGCGCCACCTCAG...GACCAGCCTGGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCTCCAGAGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCTTAGCGGCGGACTGAGGTGGCGCCCGTaGCTACCACCACAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGKQIQGSPPPGLSGGLRWRP*LPPQHS Trigger: GGAATGCTGTGGTGGTAGTCACGGGCGCCACCTCAG...TCCGCCGCTAAGACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTGTGGTAGTCGGTCTGATCAGGCTGCCCAAGCCAGCAGCCCTACCAGCTGGAGCCATCGGCAGTaGCAGCATTTACAGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCGSRSDQAAQASSPTSWSHRQ*QHLQRG Trigger: ACCTCTCTGTAAATGCTGTCACTGCCGATGGCTCCA...GCTGGTAGGGCTGCTGGCTTGGGCAGCCTGATCAGACCGACTACCACACCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | CCGAAACCAGGGACGTCCGAGACTCAGAAGACCTGTACATGGTTCTTCTACTGTATCCTGGGCCACCTCTaGAGCGCTTCGGCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPGTSETQKTCTWFFYCILGHL*SASALG Trigger: GCCCAGGGCCGAAGCGCTGCAGAGGTGGCCCAGGAT...ACAGTAGAAGAACCATGTACAGGTCTTCTGAGTCTCGGACGTCCCTGGTTTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTCCAGAACCACTTCCGAAACCAGGGACGTCCGAGACTCAGAAGACCTGTCAGCAAGTTCCCGGCTaGGCTCCTCCAGGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPPEPLPKPGTSETQKTCQQVPG*APPGPS Trigger: TGAAGGCCCTGGAGGAGCTCAGCCGGGAACTTGCTG...ACAGGTCTTCTGAGTCTCGGACGTCCCTGGTTTCGGAAGTGGTTCTGGAGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | CCGAGACTCAGAAGACCTGTACATGGTTCTTCTACTGTGAACTCTGACCCACTCATCCTGGGCCACCTCTaGAGCGCTTCGGCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRLRRPVHGSSTVNSDPLILGHL*SASALG Trigger: GCCCAGGGCCGAAGCGCTGCAGAGGTGGCCCAGGAT...GAGTGGGTCAGAGTTCACAGTAGAAGAACCATGTACAGGTCTTCTGAGTCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGTTGGCTACAGCAGGGGCAGGATaGTCGTCTGGGAGGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAFFPCHTRAKQQLSLLATAGAG*SSGRPS Trigger: ACTTGGCCTCCCAGACGACCATCCTGCCCCTGCTGT...AGCCAACAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAAGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGTGGTAGTCGGTCTGATCAGGCTGCCCAAGCCAGCAGCCCTACCAGCCAGCATGGAAGACTTTaGCACATTCTCTGCCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRCGSRSDQAAQASSPTSQHGRL*HILCRD Trigger: GTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTG...GCTGGTAGGGCTGCTGGCTTGGGCAGCCTGATCAGACCGACTACCACACCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGGTGGTACACAACTTTAATCCCAGCCCTGGGAGTTGGGGGACAGAGGCTGATGGCGACGATGTaGCCTTGCTTCCTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GWGWYTTLIPALGVGGQRLMATM*PCFLST Trigger: GGTGGAAAGGAAGCAAGGCCACATCGTCGCCATCAG...CCTCTGTCCCCCAACTCCCAGGGCTGGGATTAAAGTTGTGTACCACCCCCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR CAA 72 bp | ACACTCTGGAGGCAGAGGCAGGCAGATCTCTTGAGTTaGAGGCCAGGCTGGTCTACAGAGGGAGCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLWRQRQADLLS*RPGWSTEGAPG Trigger: TCCTGGAGCTCCCTCTGTAGACCAGCCTGGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCTCCAGAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | CACACTCTGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGGCTGGTCATCGGAAAGGAATGCTaGTCTTGCCCTGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLEAEAGRSLEFEARLVIGKEC*SCPGCC Trigger: GCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGAT...GACCAGCCTGGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCTCCAGAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGTGTGGTAGTCGGTCTGATCAGGCTGCCCAAGCCAGCAGCCCTACCAGCAGCCTCTTCCATCTCTaGACGCAGACAGTCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRCGSRSDQAAQASSPTSSLFHL*TQTVKE Trigger: TTCTTTGACTGTCTGCGTGCAGAGATGGAAGAGGCT...GCTGGTAGGGCTGCTGGCTTGGGCAGCCTGATCAGACCGACTACCACACCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| 3UTR CAA 72 bp | TTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTaGTTGGCTGCTCTCCAACAGGCTCACCTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPCHTRAKQQLS*LAALQQAHLSL Trigger: CAAGCTGAGGTGAGCCTGTTGGAGAGCAGCCAACAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGTTGGCTGCTCTCCGGGAGCCAGAGTTCTaGTGTAGACAGCCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FFPCHTRAKQQLSLLAALREPEF*CRQPWM Trigger: CATCCATGGCTGTCTACATCAGAACTCTGGCTCCCG...GAGAGCAGCCAACAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAGTGCCTTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGTTTGAGCGGATCCTCTaGAGCAGCCTGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSAFFPCHTRAKQQLSLFERIL*SSLKRL Trigger: CAGCCTCTTCAGGCTGCTGCAGAGGATCCGCTCAAA...CAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAAGGCACTCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGCTGGTGCTATTATGCCTGGTCCCCAAACCTCCAGAACCACTTCCGAAACGCGACGATGTGGCCTTaGTTCCTTTCCACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGWCYYAWSPNLQNHFRNATMWP*FLSTME Trigger: CTCCATGGTGGAAAGGAAGCAAGGCCACATCGTCGC...GTTTCGGAAGTGGTTCTGGAGGTTTGGGGACCAGGCATAATAGCACCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAGTGCCTTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGGCGACGATGTGGCCTTaGTTCCTTTCCACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSAFFPCHTRAKQQLSLATMWP*FLSTME Trigger: CTCCATGGTGGAAAGGAAGCAAGGCCACATCGTCGC...CAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAAGGCACTCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGGTGGTACACAACTTTAATCCCAGCCCTGGGAGTTGGGGGACAGAGGTTAGCCCCCGCAGCATaGAAGACTTTGGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWGWYTTLIPALGVGGQRLAPAA*KTLAHS Trigger: AGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAA...CCTCTGTCCCCCAACTCCCAGGGCTGGGATTAAAGTTGTGTACCACCCCCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | TCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCTTAGCGGCGGACTGATGGCGACGATGTaGCCTTGCTTCCTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGKQIQGSPPPGLSGGLMATM*PCFLST Trigger: GGTGGAAAGGAAGCAAGGCCACATCGTCGCCATCAG...TCCGCCGCTAAGACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTGGTGCTATTATGCCTGGTCCCCAAACCTCCAGAACCACTTCCGAAACATGCTGATCTTGCCCTaGATGCTGCTGATGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: WGWCYYAWSPNLQNHFRNMLILP*MLLMAT Trigger: CGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCAT...GTTTCGGAAGTGGTTCTGGAGGTTTGGGGACCAGGCATAATAGCACCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | AATCCCCACCCAGGAAGGTGTGGTAGTCGGTCTGATCAGGCTGCCCAAGCCAGCCATTTACAGAGAGGTTaGTATGGATGTAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPHPGRCGSRSDQAAQASHLQRG*YGCSQG Trigger: GCCCTGGCTACATCCATACCAACCTCTCTGTAAATG...GCTGGCTTGGGCAGCCTGATCAGACCGACTACCACACCTTCCTGGGTGGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGTTGGCTGCTCTCTGGAGCCATCGGCAGTaGCAGCATTTACAGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFPCHTRAKQQLSLLAALWSHRQ*QHLQRG Trigger: ACCTCTCTGTAAATGCTGTCACTGCCGATGGCTCCA...GAGAGCAGCCAACAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGTCTACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGGCAGGATGGTCGTCTaGGAGGCCAAGTCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: SLVYRVSSSIAGATQRNPGRMVV*EAKSMT Trigger: GGTCATGGACTTGGCCTCCCAGACGACCATCCTGCC...AGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTAGACCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042281.14 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGTCTACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTACAGCAGGGGCAGGATaGTCGTCTGGGAGGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVYRVSSSIAGATQRNPTAGAG*SSGRPS Trigger: ACTTGGCCTCCCAGACGACCATCCTGCCCCTGCTGT...AGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTAGACCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAATCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCTTATGCCCTGGATGCTGCTaGTGGCGACGATGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RANHSLGNKYKVALHQVLCPGCC*WRRCGL Trigger: AAGGCCACATCGTCGCCATCAGCAGCATCCAGGGCA...TAAGACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTCCAGAACCACTTCCGAAACCAGGGACGTCCGAGACTCAGAAGACCTGTATCGGAAAGGAATGCTaGTCTTGCCCTGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPPEPLPKPGTSETQKTCIGKEC*SCPGCC Trigger: GCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGAT...ACAGGTCTTCTGAGTCTCGGACGTCCCTGGTTTCGGAAGTGGTTCTGGAGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGGTGCTATTATGCCTGGTCCCCAAACCTCCAGAACCACTTCCGAAACCCATTTACAGAGAGGTTaGTATGGATGTAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGAIMPGPQTSRTTSETHLQRG*YGCSQG Trigger: GCCCTGGCTACATCCATACCAACCTCTCTGTAAATG...GGTTTCGGAAGTGGTTCTGGAGGTTTGGGGACCAGGCATAATAGCACCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCTTCGGGAGCCAGAGTTCTaGTGTAGACAGCCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLQSEFQYSWGNTEKPCLREPEF*CRQPWM Trigger: CATCCATGGCTGTCTACATCAGAACTCTGGCTCCCG...AAGACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | CCGAAACCAGGGACGTCCGAGACTCAGAAGACCTGTACATGGTTCTTCTACTGTCAGCATGGAAGACTTTaGCACATTCTCTGCCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKPGTSETQKTCTWFFYCQHGRL*HILCRD Trigger: GTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTG...ACAGTAGAAGAACCATGTACAGGTCTTCTGAGTCTCGGACGTCCCTGGTTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | AGTATGGAAGTTTCTCATAGAAAGAGACCTGCTGTGTACCTGTGCTACCCAGGGGCATCAAAGACATCCTaGGCCACCTCTGCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMEVSHRKRPAVYLCYPGASKTS*ATSAAL Trigger: AAGCGCTGCAGAGGTGGCCCAGGATGTCTTTGATGC...CCCTGGGTAGCACAGGTACACAGCAGGTCTCTTTCTATGAGAAACTTCCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCTTGAAATTTGAGCGGATCCTCTaGAGCAGCCTGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRVSSSIAGATQRNPVLKFERIL*SSLKRL Trigger: CAGCCTCTTCAGGCTGCTGCAGAGGATCCGCTCAAA...TTTCAAGACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCTTGAAAAAATGCTGATCTTGCCCTaGATGCTGCTGATGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: QSEFQYSWGNTEKPCLEKMLILP*MLLMAT Trigger: CGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCAT...TTTTTCAAGACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCTTGAAAAAGCATCAAAGACATCCTaGGCCACCTCTGCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSEFQYSWGNTEKPCLEKASKTS*ATSAAL Trigger: AAGCGCTGCAGAGGTGGCCCAGGATGTCTTTGATGC...TTTTTCAAGACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR TCA 90 bp | TCCATATTTCACTCCTTAAGAGCTAATCACTCCCTGGGAAACAAATACAAGGTACAGCAAGTTCCCGGCTaGGCTCCTCCAGGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFHSLRANHSLGNKYKVQQVPG*APPGPS Trigger: TGAAGGCCCTGGAGGAGCTCAGCCGGGAACTTGCTG...TACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCTTAAGGAGTGAAATATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGTCTACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTCAGACAGTCAAAGAATaGCTGGGTTGCATGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVYRVSSSIAGATQRNPQTVKE*LGCMLG Trigger: TCCAAGCATGCAACCCAGGCATTCTTTGACTGTCTG...AGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTAGACCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGAGCTAATCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCAGCCTCTTCCATCTCTaGACGCAGACAGTCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRANHSLGNKYKVALHQVSLFHL*TQTVKE Trigger: TTCTTTGACTGTCTGCGTGCAGAGATGGAAGAGGCT...GACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGGAGGAGGAGGTAATGCTCAACGCACAATGTTTATCTGTTCATTTTAAATTAGCCCCCGCAGCATaGAAGACTTTGGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DREEEVMLNAQCLSVHFKLAPAA*KTLAHS Trigger: AGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAA...TTTAAAATGAACAGATAAACATTGTGCGTTGAGCATTACCTCCTCCTCCCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS-3UTR CCA 90 bp | TCCATATTTCACTCCTTAAGAGCTAATCACTCCCTGGGAAACAAATACAAGGTAGTAGACAGCCATGGATaGCACAAAGTCTGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIFHSLRANHSLGNKYKVVDSHG*HKVCQE Trigger: CTCCTGACAGACTTTGTGCCATCCATGGCTGTCTAC...TACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCTTAAGGAGTGAAATATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 90 bp | AGCCCCCGCAGCATGGAAGACTTTGGCACATTCTCTGCCGAGACCTaGGGTGGCGCCCGTGACTACCACCACAGCATTCCTCAGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRSMEDFGTFSAET*GGARDYHHSIPQVS Trigger: GCTTACCTGAGGAATGCTGTGGTGGTAGTCACGGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 90 bp | TCCGCGAGGTCAAAGGTCACCACGAAGGGTTGGTGTGTCTGTCCCTaGGAAGAACCAGCAAGTTCCCGGCTGAGCTCCTCCAGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SARSKVTTKGWCVCP*EEPASSRLSSSRAF Trigger: GAAGGCCCTGGAGGAGCTCAGCCGGGAACTTGCTGGTTCTTCTCAGGGACAGACACACCAACCCTTCGTGGTGACCTTTGACCTCGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 90 bp | GGTGGCGCCCGTGACTACCACCACAGCATTCCTCAGGTAAGCCTTTaGGCGGATCCTCTGCAGCAGCCTGAAGAGGCTGAAAATCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGARDYHHSIPQVSL*ADPLQQPEEAENPQ Trigger: CTGGGGATTTTCAGCCTCTTCAGGCTGCTGCAGAGGATCCGCTCAAAGGCTTACCTGAGGAATGCTGTGGTGGTAGTCACGGGCGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CCA 90 bp | GCCTTCACATTTCGTCCACAGAGGACCAGTTTAGCCCCCGCAGCATaGAAGACTTTGGCACATTCTCTGCCGAGACCTGAGGTGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AFTFRPQRTSLAPAA*KTLAHSLPRPEVAP Trigger: GGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAAACTGGTCCTCTGTGGACGAAATGTGAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS GCA 90 bp | GATGAGAACGTCCACATAGCCAAAGCACTGGAGGATCTCAGCTGCTaGAGCAGCAATAGTACCAGGATCCGCGAGGTCAAAGGTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: DENVHIAKALEDLSC*SSNSTRIREVKGHH Trigger: GTGGTGACCTTTGACCTCGCGGATCCTGGTACTATTGCTGCTGCAGCAGCTGAGATCCTCCAGTGCTTTGGCTATGTGGACGTTCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CCA 90 bp | TTGGAGGCTGAATATGCCGATCGGAAAGGAATGCTGATCTTGCCCTaGATGCTGCTGATGGCGACGATGTGGCCTTGCTTCCTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LEAEYADRKGMLILP*MLLMATMWPCFLST Trigger: GGTGGAAAGGAAGCAAGGCCACATCGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGATCGGCATATTCAGCCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CCA 90 bp | AAAGGAATGCTGATCTTGCCCTGGATGCTGCTGATGGCGACGATGTaGCCTTGCTTCCTTTCCACCATGGAGGGTAGGAGCGCTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KGMLILPWMLLMATM*PCFLSTMEGRSAFV Trigger: AACAAAAGCGCTCCTACCCTCCATGGTGGAAAGGAAGCAAGGCCACATCGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTACACAACTTTAATCCCAGCCCTGGGAGTTGGGGGACAGAGGCAAGTGGACAAAGAATGCCTGGGTaGCATGCTTGGAGGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVHNFNPSPGSWGTEASGQRMPG*HAWRLN Trigger: ATTCAGCCTCCAAGCATGCAACCCAGGCATTCTTTG...TCCACTTGCCTCTGTCCCCCAACTCCCAGGGCTGGGATTAAAGTTGTGTACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGAGTGCCTTCTTCCCATGCCACACCAGAGCCAAGCAGCAACTCTCCTTGCAAAGAATGCCTGGGTaGCATGCTTGGAGGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSAFFPCHTRAKQQLSLQRMPG*HAWRLN Trigger: ATTCAGCCTCCAAGCATGCAACCCAGGCATTCTTTG...CAAGGAGAGTTGCTGCTTGGCTCTGGTGTGGCATGGGAAGAAGGCACTCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS GCA 90 bp | ATTGATGAGAACGTCCACATAGCCAAAGCACTGGAGGATCTCAGCTaGTGCAGCAGCAATAGTACCAGGATCCGCGAGGTCAAAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDENVHIAKALEDLS*CSSNSTRIREVKGH Trigger: GTGACCTTTGACCTCGCGGATCCTGGTACTATTGCTGCTGCAGCAGCTGAGATCCTCCAGTGCTTTGGCTATGTGGACGTTCTCATCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGAGCTAATCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCGGTCACCACGAAGGGTaGGTGTGTCTGTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRANHSLGNKYKVALHQVGHHEG*VCLSLR Trigger: TCTCAGGGACAGACACACCAACCCTTCGTGGTGACC...GACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCGCCTGGGTTGCATGCTaGGAGGCTGAATATGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVYRVSSSIAGATQRNPVAWVAC*EAEYAD Trigger: ATCGGCATATTCAGCCTCCAAGCATGCAACCCAGGC...GACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTAGACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 90 bp | GGGCTGTGTTCTTGTCTAGAGCTCCATATCTGGAGCCATCGGCAGTaGCAGCATTTACAGAGAGGTTGGTATGGATGTAGCCAGGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLCSCLELHIWSHRQ*QHLQRGWYGCSQGL Trigger: TAAGCCCTGGCTACATCCATACCAACCTCTCTGTAAATGCTGTCACTGCCGATGGCTCCAGATATGGAGCTCTAGACAAGAACACAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | TACAGAGTGAGTTCCAGTATAGCTGGGGCAACACAGAGAAACCCTGTCTTGAAAGGTCACCACGAAGGGTaGGTGTGTCTGTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YRVSSSIAGATQRNPVLKGHHEG*VCLSLR Trigger: TCTCAGGGACAGACACACCAACCCTTCGTGGTGACC...TTTCAAGACAGGGTTTCTCTGTGTTGCCCCAGCTATACTGGAACTCACTCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | CCGAGACTCAGAAGACCTGTACATGGTTCTTCTACTGTGAACTCTGACCCACTCCCCTGGGCTGTGTTCTaGTCTAGAGCTCCATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRLRRPVHGSSTVNSDPLPWAVF*SRAPYL Trigger: CAGATATGGAGCTCTAGACAAGAACACAGCCCAGGG...GAGTGGGTCAGAGTTCACAGTAGAAGAACCATGTACAGGTCTTCTGAGTCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGGACGTCCGAGACTCAGAAGACCTGTACATGGTTCTTCTACTGTGAAAGGGTAGGAGCGCTTTaGTTAGAGCAACAGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPGTSETQKTCTWFFYCERVGAL*LEQQGQ Trigger: TTGGCCCTGTTGCTCTAACAAAAGCGCTCCTACCCT...TTCACAGTAGAAGAACCATGTACAGGTCTTCTGAGTCTCGGACGTCCCTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGAGCTAATCACTCCCTGGGAAACAAATACAAGGTAGCCCTCCACCAGGTCAGGGTAGGAGCGCTTTaGTTAGAGCAACAGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRANHSLGNKYKVALHQVRVGAL*LEQQGQ Trigger: TTGGCCCTGTTGCTCTAACAAAAGCGCTCCTACCCT...GACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGGGAGTGATTAGCTCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS-3UTR CAA 90 bp | AGTATGGAAGTTTCTCATAGAAAGAGACCTGCTGTGTACCTGTGCTACCCAGGGCCCTGGGCTGTGTTCTaGTCTAGAGCTCCATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SMEVSHRKRPAVYLCYPGPWAVF*SRAPYL Trigger: CAGATATGGAGCTCTAGACAAGAACACAGCCCAGGG...CCCTGGGTAGCACAGGTACACAGCAGGTCTCTTTCTATGAGAAACTTCCATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108718.2 |
||
| CDS CAA 72 bp | CAGAGGACCAGTTTAGCCCCCGCAGCATGGAAGACTTaGGCACATTCTCTGCCGAGACCTGAGGTGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRTSLAPAAWKT*AHSLPRPEVAP Trigger: GGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAAACTGGTCCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CAA 72 bp | GCCACCTCTGCAGCGCTTCGGCCCTGGGCTGTGTTCTaGTCTAGAGCTCCATATCTGGAGCCATCGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATSAALRPWAVF*SRAPYLEPSAV Trigger: CACTGCCGATGGCTCCAGATATGGAGCTCTAGACAAGAACACAGCCCAGGGCCGAAGCGCTGCAGAGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CAA 90 bp | TTTCGTCCACAGAGGACCAGTTTAGCCCCCGCAGCATGGAAGACTTaGGCACATTCTCTGCCGAGACCTGAGGTGGCGCCCGTGACTACC | + |
|
Preference number: 6 (lower is better) Translates to: FRPQRTSLAPAAWKT*AHSLPRPEVAPVTT Trigger: GGTAGTCACGGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAAACTGGTCCTCTGTGGACGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 72 bp | AGCATGGAAGACTTTGGCACATTCTCTGCCGAGACCTaGGGTGGCGCCCGTGACTACCACCACAGCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SMEDFGTFSAET*GGARDYHHSIP Trigger: AGGAATGCTGTGGTGGTAGTCACGGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 72 bp | TCAAAGGTCACCACGAAGGGTTGGTGTGTCTGTCCCTaGGAAGAACCAGCAAGTTCCCGGCTGAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVTTKGWCVCP*EEPASSRLSSS Trigger: GGAGGAGCTCAGCCGGGAACTTGCTGGTTCTTCTCAGGGACAGACACACCAACCCTTCGTGGTGACCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CAA 90 bp | AGCAATAGTACCAGGATCCGCGAGGTCAAAGGTCACCACGAAGGGTaGGTGTGTCTGTCCCTGAGAAGAACCAGCAAGTTCCCGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNSTRIREVKGHHEG*VCLSLRRTSKFPAE Trigger: CTCAGCCGGGAACTTGCTGGTTCTTCTCAGGGACAGACACACCAACCCTTCGTGGTGACCTTTGACCTCGCGGATCCTGGTACTATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 72 bp | CGTGACTACCACCACAGCATTCCTCAGGTAAGCCTTTaGGCGGATCCTCTGCAGCAGCCTGAAGAGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RDYHHSIPQVSL*ADPLQQPEEAE Trigger: TTCAGCCTCTTCAGGCTGCTGCAGAGGATCCGCTCAAAGGCTTACCTGAGGAATGCTGTGGTGGTAGTCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS GCA 72 bp | AACGTCCACATAGCCAAAGCACTGGAGGATCTCAGCTaGTGCAGCAGCAATAGTACCAGGATCCGCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NVHIAKALEDLS*CSSNSTRIREV Trigger: GACCTCGCGGATCCTGGTACTATTGCTGCTGCAGCAGCTGAGATCCTCCAGTGCTTTGGCTATGTGGACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CCA 72 bp | TTTCGTCCACAGAGGACCAGTTTAGCCCCCGCAGCATaGAAGACTTTGGCACATTCTCTGCCGAGACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FRPQRTSLAPAA*KTLAHSLPRPE Trigger: CTCAGGTCTCGGCAGAGAATGTGCCAAAGTCTTCCATGCTGCGGGGGCTAAACTGGTCCTCTGTGGACGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CAA 90 bp | GCATGCTTGGAGGCTGAATATGCCGATCGGAAAGGAATGCTGATCTaGCCCTGGATGCTGCTGATGGCGACGATGTGGCCTTGCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ACLEAEYADRKGMLI*PWMLLMATMWPCFL Trigger: AAGGAAGCAAGGCCACATCGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGATCGGCATATTCAGCCTCCAAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS GCA 72 bp | GTCCACATAGCCAAAGCACTGGAGGATCTCAGCTGCTaGAGCAGCAATAGTACCAGGATCCGCGAGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VHIAKALEDLSC*SSNSTRIREVK Trigger: TTTGACCTCGCGGATCCTGGTACTATTGCTGCTGCAGCAGCTGAGATCCTCCAGTGCTTTGGCTATGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CCA 72 bp | GAATATGCCGATCGGAAAGGAATGCTGATCTTGCCCTaGATGCTGCTGATGGCGACGATGTGGCCTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EYADRKGMLILP*MLLMATMWPCF Trigger: GAAGCAAGGCCACATCGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGATCGGCATATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS GCA 72 bp | TCTGCACGCAGACAGTCAAAGAATGCCTGGGTTGCATaGTTGGAGGCTGAATATGCCGATCGGAAAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: SARRQSKNAWVA*LEAEYADRKGM Trigger: CATTCCTTTCCGATCGGCATATTCAGCCTCCAAGCATGCAACCCAGGCATTCTTTGACTGTCTGCGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS TCA 72 bp | TCTTGTCTAGAGCTCCATATCTGGAGCCATCGGCAGTaGCAGCATTTACAGAGAGGTTGGTATGGATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCLELHIWSHRQ*QHLQRGWYGCS Trigger: GCTACATCCATACCAACCTCTCTGTAAATGCTGTCACTGCCGATGGCTCCAGATATGGAGCTCTAGACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS GCA 72 bp | TATCACAGTCACCTTGATGTTAGCCTCTTCCATCTCTaGACGCAGACAGTCAAAGAATGCCTGGGTTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: YHSHLDVSLFHL*TQTVKECLGCM Trigger: CATGCAACCCAGGCATTCTTTGACTGTCTGCGTGCAGAGATGGAAGAGGCTAACATCAAGGTGACTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||
| CDS CAA 72 bp | CTTGCTTCCTTTCCACCATGGAGGGTAGGAGCGCTTTaGTTAGAGCAACAGGGCCAAAGTAGTTTATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LASFPPWRVGAL*LEQQGQSSLFP Trigger: TGGAAATAAACTACTTTGGCCCTGTTGCTCTAACAAAAGCGCTCCTACCCTCCATGGTGGAAAGGAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042281.14 ENSMUST00000108718.2 |
||