Pregenerated sensors for DHRS13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020834Ensembl transcript IDs: ENSMUST00000021187.12, ENSMUST00000092881.4, ENSMUST00000122342.2, ENSMUST00000144028.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTTGGCTAGTTTaGTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAGCCCACCACTG | + |
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Preference number: 1 (lower is better) Translates to: QAGWQAPGQTARWLV*CQRTPEAPAASPPL Trigger: CAGTGGTGGGCTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 90 bp | CAGTGCCCTCAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTTaGCTAGTTTGCTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: QCPQAGWQAPGQTAR*LVCCQRTPEAPAAS Trigger: GCTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTGAGGGCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 90 bp | GACGACCACGTCGGTGGGCAGCCGATGACACTATTACCACACGGCTaGGGGCACATGACCTCAGGCGGGGTAGCAACAAGTGCGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: DDHVGGQPMTLLPHG*GHMTSGGVATSASA Trigger: TGCTGACGCACTTGTTGCTACCCCGCCTGAGGTCATGTGCCCCCAGCCGTGTGGTAATAGTGTCATCGGCTGCCCACCGACGTGGTCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 90 bp | TGTCTGGGCACCCCCTTGAGGTGCCCGGAGCACCAGCCAAGCCAGTaGGCGCAAAATAGGACGCAGCCATCCAGGAAGATGACGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: CLGTPLRCPEHQPSQ*AQNRTQPSRKMTQE Trigger: TTCCTGCGTCATCTTCCTGGATGGCTGCGTCCTATTTTGCGCCCACTGGCTTGGCTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR TCA 90 bp | AGCCAAGCCAGTGGGCGCAAAATAGGACGCAGCCATCCAGGAAGATaGCGCAGGAAGAGCTCCGAGTTCACAGGTCCTGGGTGGGCCGCA | + |
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Preference number: 1 (lower is better) Translates to: SQASGRKIGRSHPGR*RRKSSEFTGPGWAA Trigger: TGCGGCCCACCCAGGACCTGTGAACTCGGAGCTCTTCCTGCGTCATCTTCCTGGATGGCTGCGTCCTATTTTGCGCCCACTGGCTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 90 bp | TCCAGAAACTGTGGTTTTCTCAGGGCTGGGGGCGCTCTGAGAAGATaGGGCCCTGGGATCCTCAGGTTCCGGCTCTTCATCAGGGTCATC | + |
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Preference number: 1 (lower is better) Translates to: SRNCGFLRAGGALRR*GPGILRFRLFIRVI Trigger: GATGACCCTGATGAAGAGCCGGAACCTGAGGATCCCAGGGCCCCATCTTCTCAGAGCGCCCCCAGCCCTGAGAAAACCACAGTTTCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR TCA 90 bp | CCAGGTGCAAGCCCTGCCAACTTCTTGGTAGCTTTCCATAGCCTTTaGGCAGCCTGGTCATCTCTAGCAGCTGGGGAGACCTCCTCCACG | + |
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Preference number: 1 (lower is better) Translates to: PGASPANFLVAFHSL*AAWSSLAAGETSST Trigger: CGTGGAGGAGGTCTCCCCAGCTGCTAGAGATGACCAGGCTGCTCAAAGGCTATGGAAAGCTACCAAGAAGTTGGCAGGGCTTGCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 90 bp | CTCAGGCGGGGTAGCAACAAGTGCGTCAGCAGAAAAGGGCCAACATaGTTCACTCGCAACAGCAGGTTAAAGGTTTCCCGAGTCCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LRRGSNKCVSRKGPT*FTRNSRLKVSRVRP Trigger: TGGCCGGACTCGGGAAACCTTTAACCTGCTGTTGCGAGTGAACCATGTTGGCCCTTTTCTGCTGACGCACTTGTTGCTACCCCGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGGAGACCTCCTCCACGTGGCAGTTGGCAAAATATCTCCCGCTGAGGGGGCCCGAAGCTCCTGCTaGCAGCCCACCACTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SWGDLLHVAVGKISPAEGARSSC*QPTTGQ Trigger: CTGCCCAGTGGTGGGCTGGCAGCAGGAGCTTCGGGC...CCCCTCAGCGGGAGATATTTTGCCAACTGCCACGTGGAGGAGGTCTCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CAA 90 bp | CCAGTGCCCTCAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTaGGCTAGTTTGCTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PVPSSWVASSRANST*ASLLSAYARSSCCQ Trigger: CTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTGAGGGCACTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAATGCCCTCCTGCAGAGCGCAGTACAGGGGTGTCTGGGCACCCCCTTGAGGTGCCCTCAAGCTGGGTaGCAAGCTCCCGGGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: LNALLQSAVQGCLGTPLRCPQAG*QAPGQT Trigger: TGTTTGCCCGGGAGCTTGCCACCCAGCTTGAGGGCA...CCTCAAGGGGGTGCCCAGACACCCCTGTACTGCGCTCTGCAGGAGGGCATTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGGAGACCTCCTCCACGTGGCAGTTGGCAAAATATCTCCCGCTGAGGGGCCAGTGCCCTCAAGCTaGGTGGCAAGCTCCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SWGDLLHVAVGKISPAEGPVPSS*VASSRA Trigger: TGCCCGGGAGCTTGCCACCCAGCTTGAGGGCACTGG...CCCCTCAGCGGGAGATATTTTGCCAACTGCCACGTGGAGGAGGTCTCCCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CAA 90 bp | TCAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTTGGCTAGTTaGCTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAGCCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: SSWVASSRANSTLAS*LSAYARSSCCQPTT Trigger: AGTGGTGGGCTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTTGGCTAGTTTGCTGTCAGCTGTGGCAAAGGCCTaGACGGAGGCCAGACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: SSWVASSRANSTLASLLSAVAKA*TEARLA Trigger: GGCCAGTCTGGCCTCCGTGCAGGCCTTTGCCACAGC...TGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACCACTGGGCAGTCCAGACGTGTGAAGTCGAGACGACCACGTCGGTGGAGCTTAAGAAGGCTGTaGCAAAGGCCTGCACGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QPTTGQSRRVKSRRPRRWSLRRL*QRPARR Trigger: CCTCCGTGCAGGCCTTTGCCACAGCCTTCTTAAGCT...CCACCGACGTGGTCGTCTCGACTTCACACGTCTGGACTGCCCAGTGGTGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCGAGTTCACAGGTCCTGGGTGGGCCGCATAGCAGGTAACACCAGTGCCCTATTACCACACGGCTaGGGGCACATGACCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ELRVHRSWVGRIAGNTSALLPHG*GHMTSG Trigger: GCCTGAGGTCATGTGCCCCCAGCCGTGTGGTAATAG...GGCACTGGTGTTACCTGCTATGCGGCCCACCCAGGACCTGTGAACTCGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTGGGGAGACCTCCTCCACGTGGCAGTTGGCAAAATATCTCCCGCTGAGGGTGGCAACCCTTCAGTaGCCAGGCACACAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: AAGETSSTWQLAKYLPLRVATLQ*PGTQLR Trigger: TCTCAGTTGTGTGCCTGGGCACTGAAGGGTTGCCAC...CCTCAGCGGGAGATATTTTGCCAACTGCCACGTGGAGGAGGTCTCCCCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATGGCACCCCCTTGAGGTaGCCGGAGCACCAGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GRAQKSENQIPEQHSISYGTPLR*PEHQPS Trigger: GCTTGGCTGGTGCTCCGGGCACCTCAAGGGGGTGCC...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGAGTGGCAACCCTTCAGTaGCCAGGCACACAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FISFHKEKGCSGHDKRFRVATLQ*PGTQLR Trigger: TCTCAGTTGTGTGCCTGGGCACTGAAGGGTTGCCAC...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATCTGCCAGCCCACCACTaGGCAGTCCAGACGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: GRAQKSENQIPEQHSISYLPAHH*AVQTCE Trigger: TTCACACGTCTGGACTGCCCAGTGGTGGGCTGGCAG...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGCACCAGCCAAGCCAGTaGGCGCAAAATAGGACGCAG | + |
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Preference number: 2 (lower is better) Translates to: EVVFISFHKEKGCSGHDKHQPSQ*AQNRTQ Trigger: CTGCGTCCTATTTTGCGCCCACTGGCTTGGCTGGTG...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATGTGGCAACCCTTCAGTaGCCAGGCACACAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRAQKSENQIPEQHSISYVATLQ*PGTQLR Trigger: TCTCAGTTGTGTGCCTGGGCACTGAAGGGTTGCCAC...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAAGGGCTCAGAAATCTaGAAATCAAATTCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVVFISFHKEKGCSGHDKKGSEI*KSNSRA Trigger: TGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTT...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATAAAGTTGCCAAGGGCTaGATTCAGTCAGTAATTAAT | + |
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Preference number: 2 (lower is better) Translates to: GRAQKSENQIPEQHSISYKVAKG*IQSVIN Trigger: ATTAATTACTGACTGAATTCAGCCCTTGGCAACTTT...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | AGCGTACGCCCGAAGCTCCTGCTGCCAGCCCACCACTaGGCAGTCCAGACGTGTGAAGTCGAGACGACCACG | + |
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Preference number: 3 (lower is better) Translates to: SVRPKLLLPAHH*AVQTCEVETTT Trigger: CGTGGTCGTCTCGACTTCACACGTCTGGACTGCCCAGTGGTGGGCTGGCAGCAGGAGCTTCGGGCGTACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR GCA 72 bp | TGGCAAGCTCCCGGGCAAACAGCACGTTGGCTAGTTTaGTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: WQAPGQTARWLV*CQRTPEAPAAS Trigger: GCTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | GTCGGTGGGCAGCCGATGACACTATTACCACACGGCTaGGGGCACATGACCTCAGGCGGGGTAGCAACAAGT | + |
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Preference number: 3 (lower is better) Translates to: VGGQPMTLLPHG*GHMTSGGVATS Trigger: ACTTGTTGCTACCCCGCCTGAGGTCATGTGCCCCCAGCCGTGTGGTAATAGTGTCATCGGCTGCCCACCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | CAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTTaGCTAGTTTGCTGTCAGCGTACGCCCGAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QAGWQAPGQTAR*LVCCQRTPEAP Trigger: AGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | TGTGGTTTTCTCAGGGCTGGGGGCGCTCTGAGAAGATaGGGCCCTGGGATCCTCAGGTTCCGGCTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: CGFLRAGGALRR*GPGILRFRLFI Trigger: GATGAAGAGCCGGAACCTGAGGATCCCAGGGCCCCATCTTCTCAGAGCGCCCCCAGCCCTGAGAAAACCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR GCA 72 bp | CTTGGCTCAGAGCTTAAGAAGGCTGTGGCAAAGGCCTaGACGGAGGCCAGACTGGCCAAGTCCAAGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: LGSELKKAVAKA*TEARLAKSKAM Trigger: CATGGCCTTGGACTTGGCCAGTCTGGCCTCCGTGCAGGCCTTTGCCACAGCCTTCTTAAGCTCTGAGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR GCA 72 bp | CCTAGGGCAGACTCCCGGGCTCAAAACCCCAGTTCCTaGCCTGACTTAGTCCTTTCCCAATTCCGCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PRADSRAQNPSS*PDLVLSQFRLH Trigger: ATGGAGGCGGAATTGGGAAAGGACTAAGTCAGGGCAGGAACTGGGGTTTTGAGCCCGGGAGTCTGCCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR TCA 72 bp | AGCCCTGCCAACTTCTTGGTAGCTTTCCATAGCCTTTaGGCAGCCTGGTCATCTCTAGCAGCTGGGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: SPANFLVAFHSL*AAWSSLAAGET Trigger: GGTCTCCCCAGCTGCTAGAGATGACCAGGCTGCTCAAAGGCTATGGAAAGCTACCAAGAAGTTGGCAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | GCGAGCCCTGATAGCTATGAGAAGGTCCAGAAACTGTaGTTTTCTCAGGGCTGGGGGCGCTCTGAGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: ASPDSYEKVQKL*FSQGWGRSEKM Trigger: CATCTTCTCAGAGCGCCCCCAGCCCTGAGAAAACCACAGTTTCTGGACCTTCTCATAGCTATCAGGGCTCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGGGCCCTGGGATCCTCAGGTTCCGGCTCTTCATCAGGGTCATCATCATCGTTACCTAGCTAGAAAGTaGCCAAGGGCTGAATTCAGT | + |
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Preference number: 3 (lower is better) Translates to: MGPWDPQVPALHQGHHHRYLARK*PRAEFS Trigger: ACTGAATTCAGCCCTTGGCAACTTTCTAGCTAGGTA...ACGATGATGATGACCCTGATGAAGAGCCGGAACCTGAGGATCCCAGGGCCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CCA 72 bp | GGTAGCAACAAGTGCGTCAGCAGAAAAGGGCCAACATaGTTCACTCGCAACAGCAGGTTAAAGGTTTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: GSNKCVSRKGPT*FTRNSRLKVSR Trigger: TCGGGAAACCTTTAACCTGCTGTTGCGAGTGAACCATGTTGGCCCTTTTCTGCTGACGCACTTGTTGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR TCA 72 bp | TGGGCAGATCACTACTCAGGGAAGGGCTCAGAAATCTaGAAATCAAATTCCAGAGCAACACAGTATCTCATA | + |
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Preference number: 3 (lower is better) Translates to: WADHYSGKGSEI*KSNSRATQYLI Trigger: TATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCCCTGAGTAGTGATCTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 ENSMUST00000144028.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATTTTGGGGCACCTCAGTaGTATCACAGTTACTACTGC | + |
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Preference number: 3 (lower is better) Translates to: GRAQKSENQIPEQHSISYFGAPQ*YHSYYC Trigger: GCAGTAGTAACTGTGATACAACTGAGGTGCCCCAAA...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| 3UTR CAA 72 bp | CTGCAGAGCGCAGTACAGGGGTGTCTGGGCACCCCCTaGAGGTGCCCGGAGCACCAGCCAAGCCAGTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LQSAVQGCLGTP*RCPEHQPSQWA Trigger: CGCCCACTGGCTTGGCTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGACACCCCTGTACTGCGCTCTGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| CDS-3UTR GCA 90 bp | AGCTCCCGGGCAAACAGCACGTTGGCTAGTTTGCTGTCAGCGTACGCCCGAAGCTGCGGCCCCGAAGGCTaGCGATGCCGCCGCACGACG | + |
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Preference number: 4 (lower is better) Translates to: SSRANSTLASLLSAYARSCGPEG*RCRRTT Trigger: CGTCGTGCGGCGGCATCGGCAGCCTTCGGGGCCGCA...GCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CAA 72 bp | GTGGCAAGCTCCCGGGCAAACAGCACGTTGGCTAGTTaGCTGTCAGCGTACGCCCGAAGCTCCTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VASSRANSTLAS*LSAYARSSCCQ Trigger: CTGGCAGCAGGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CAA 72 bp | TCAAGCTGGGTGGCAAGCTCCCGGGCAAACAGCACGTaGGCTAGTTTGCTGTCAGCGTACGCCCGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSWVASSRANST*ASLLSAYARSS Trigger: GGAGCTTCGGGCGTACGCTGACAGCAAACTAGCCAACGTGCTGTTTGCCCGGGAGCTTGCCACCCAGCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144028.2 |
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| 3UTR CAA 72 bp | GGGGTTTGGCCCTGTAGCACCTTTGGGGCACCTCAGTaGTATCACAGTTACTACTGCGTCACCTCGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: GVWPCSTFGAPQ*YHSYYCVTSGT Trigger: GGTGCCCGAGGTGACGCAGTAGTAACTGTGATACAACTGAGGTGCCCCAAAGGTGCTACAGGGCCAAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGAGTCTGGGCACCCCCTTaGGGTGCCCGGAGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: FISFHKEKGCSGHDKRFRVWAPP*GARSTS Trigger: GCTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGAC...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGAGCCCGAAGCTCCTGCTaGCAGCCCACCACTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FISFHKEKGCSGHDKRFRARSSC*QPTTGQ Trigger: CTGCCCAGTGGTGGGCTGGCAGCAGGAGCTTCGGGC...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGGTCTGGGCACCCCCTTaGGGTGCCCGGAGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKVWAPP*GARSTS Trigger: GCTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGAC...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGATACGCCCGAAGCTCCTaGTGCCAGCCCACCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: FISFHKEKGCSGHDKRFRYARSS*CQPTTG Trigger: CCCAGTGGTGGGCTGGCAGCAGGAGCTTCGGGCGTA...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGGGCACCCCCTTGAGGTaGCCGGAGCACCAGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKGTPLR*PEHQPS Trigger: GCTTGGCTGGTGCTCCGGGCACCTCAAGGGGGTGCC...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTTGCGGCCCCGAAGGCTaGCGATGCCGCCGCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPCGPEG*RCRRTT Trigger: CGTCGTGCGGCGGCATCGGCAGCCTTCGGGGCCGCA...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000144028.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATGCTGTGGCAAAGGCCTaGACGGAGGCCAGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYAVAKA*TEARLA Trigger: GGCCAGTCTGGCCTCCGTGCAGGCCTTTGCCACAGC...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATTACGCCCGAAGCTCCTaGTGCCAGCCCACCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYYARSS*CQPTTG Trigger: CCCAGTGGTGGGCTGGCAGCAGGAGCTTCGGGCGTA...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATCCAGTGCCCTCAAGCTaGGTGGCAAGCTCCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYPVPSS*VASSRA Trigger: TGCCCGGGAGCTTGCCACCCAGCTTGAGGGCACTGG...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGACACCAGCCAAGCCAGTaGGCGCAAAATAGGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FISFHKEKGCSGHDKRFRHQPSQ*AQNRTQ Trigger: CTGCGTCCTATTTTGCGCCCACTGGCTTGGCTGGTG...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTGGCACCCCCTTGAGGTaGCCGGAGCACCAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPGTPLR*PEHQPS Trigger: GCTTGGCTGGTGCTCCGGGCACCTCAAGGGGGTGCC...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGCTGCCAGCCCACCACTaGGCAGTCCAGACGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKLPAHH*AVQTCE Trigger: TTCACACGTCTGGACTGCCCAGTGGTGGGCTGGCAG...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAATCTGGGGTTACAGTGTCTCTTAGGAAGTAGTATTCATTTCCTTTCAGAGAAGATGGGGCCCTaGGATCCTCAGGTTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNLGLQCLLGSSIHFLSEKMGP*DPQVPA Trigger: AGCCGGAACCTGAGGATCCCAGGGCCCCATCTTCTC...TGAAAGGAAATGAATACTACTTCCTAAGAGACACTGTAACCCCAGATTCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGTCCCTGCATTGTGGATaGGGACGTCCAGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKSLHCG*GRPALA Trigger: AGCCAAGGCTGGACGTCCTCATCCACAATGCAGGGA...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAATCTGGGGTTACAGTGTCTCTTAGGAAGTAGTATTCATTTCCTTTCAAGCCATCCAGGAAGATaGCGCAGGAAGAGCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLNLGLQCLLGSSIHFLSSHPGR*RRKSSE Trigger: CTCGGAGCTCTTCCTGCGTCATCTTCCTGGATGGCT...TGAAAGGAAATGAATACTACTTCCTAAGAGACACTGTAACCCCAGATTCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCGCTGTGGCAAAGGCCTaGACGGAGGCCAGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLKIKFQSNTVSHISSAVAKA*TEARLA Trigger: GGCCAGTCTGGCCTCCGTGCAGGCCTTTGCCACAGC...GGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAATCTGGGGTTACAGTGTCTCTTAGGAAGTAGTATTCATTTCCTTTCACTATTACCACACGGCTaGGGGCACATGACCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNLGLQCLLGSSIHFLSLLPHG*GHMTSG Trigger: GCCTGAGGTCATGTGCCCCCAGCCGTGTGGTAATAG...TGAAAGGAAATGAATACTACTTCCTAAGAGACACTGTAACCCCAGATTCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGCTATTACCACACGGCTaGGGGCACATGACCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKLLPHG*GHMTSG Trigger: GCCTGAGGTCATGTGCCCCCAGCCGTGTGGTAATAG...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATTGCCCTCAAGCTGGGTaGCAAGCTCCCGGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYCPQAG*QAPGQT Trigger: TGTTTGCCCGGGAGCTTGCCACCCAGCTTGAGGGCA...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCCAGTGCCCTCAAGCTaGGTGGCAAGCTCCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLKIKFQSNTVSHISSPVPSS*VASSRA Trigger: TGCCCGGGAGCTTGCCACCCAGCTTGAGGGCACTGG...GGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATGAGAAGATGGGGCCCTaGGATCCTCAGGTTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYEKMGP*DPQVPA Trigger: AGCCGGAACCTGAGGATCCCAGGGCCCCATCTTCTC...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATAGCCATCCAGGAAGATaGCGCAGGAAGAGCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYSHPGR*RRKSSE Trigger: CTCGGAGCTCTTCCTGCGTCATCTTCCTGGATGGCT...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAATCTGGGGTTACAGTGTCTCTTAGGAAGTAGTATTCATTTCCTTTCACAAAATATCTCCCGCTaGGGGGCTCAATGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNLGLQCLLGSSIHFLSQNISR*GAQCPP Trigger: AGGAGGGCATTGAGCCCCTCAGCGGGAGATATTTTG...TGAAAGGAAATGAATACTACTTCCTAAGAGACACTGTAACCCCAGATTCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGATCCAGGTGCAAGCCCTaGCAACTTCTTGGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FISFHKEKGCSGHDKRFRSRCKP*QLLGSF Trigger: AAAGCTACCAAGAAGTTGGCAGGGCTTGCACCTGGA...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATCACCAGCCAAGCCAGTaGGCGCAAAATAGGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYHQPSQ*AQNRTQ Trigger: CTGCGTCCTATTTTGCGCCCACTGGCTTGGCTGGTG...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATAGCTTAAGAAGGCTGTaGCAAAGGCCTGCACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYSLRRL*QRPARR Trigger: CCTCCGTGCAGGCCTTTGCCACAGCCTTCTTAAGCT...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTTGCCCTCAAGCTGGGTaGCAAGCTCCCGGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPCPQAG*QAPGQT Trigger: TGTTTGCCCGGGAGCTTGCCACCCAGCTTGAGGGCA...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GAAGTAGTATTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGGAGACCTCCTCCACGTaGCAGTTGGCAAAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVVFISFHKEKGCSGHDKETSST*QLAKYL Trigger: GAGATATTTTGCCAACTGCCACGTGGAGGAGGTCTC...CTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAATACTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATAAGGTCCAGAAACTGTaGTTTTCTCAGGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQKSENQIPEQHSISYKVQKL*FSQGWG Trigger: CCCCCAGCCCTGAGAAAACCACAGTTTCTGGACCTT...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR TCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTCAAAATATCTCCCGCTaGGGGGCTCAATGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPQNISR*GAQCPP Trigger: AGGAGGGCATTGAGCCCCTCAGCGGGAGATATTTTG...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCAGCTTAAGAAGGCTGTaGCAAAGGCCTGCACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNLKIKFQSNTVSHISSSLRRL*QRPARR Trigger: CCTCCGTGCAGGCCTTTGCCACAGCCTTCTTAAGCT...GGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTAAGGTCCAGAAACTGTaGTTTTCTCAGGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPKVQKL*FSQGWG Trigger: CCCCCAGCCCTGAGAAAACCACAGTTTCTGGACCTT...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR GCA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTTCCAGGTGCAAGCCCTaGCAACTTCTTGGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKSENQIPEQHSISYIIPSRCKP*QLLGSF Trigger: AAAGCTACCAAGAAGTTGGCAGGGCTTGCACCTGGA...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCGAGACCTCCTCCACGTaGCAGTTGGCAAAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLKIKFQSNTVSHISSETSST*QLAKYL Trigger: GAGATATTTTGCCAACTGCCACGTGGAGGAGGTCTC...GGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS GCA 90 bp | ACACCTGACGGAGGTCGAAAGCGGCCGCTTCCCCGCGCTCCCGGCTaGGGCAGGCCAGCACCACGCGCGCTCCCCGGCGCGCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPDGGRKRPLPRAPG*GRPAPRALPGAPAP Trigger: TGGAGCTGGCGCGCCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCGGGAGCGCGGGGAAGCGGCCGCTTTCGACCTCCGTCAGGTGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092881.4 |
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| CDS GCA 90 bp | TTTCCTGACGGAGGTCGAAAGCGGCCGCTTCCCCGCGCTCCCGGCTaGGGCAGGCCAGCACCACGCGCGCTCCCCGGCGCGCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPDGGRKRPLPRAPG*GRPAPRALPGAPAP Trigger: TGGAGCTGGCGCGCCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCGGGAGCGCGGGGAAGCGGCCGCTTTCGACCTCCGTCAGGAAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS TCA 90 bp | TGTAACAAACTTTTCCTAAGAGACTGTGGTCTTCTCTTACACACCTaGCGGAGGTCGAAAGCGGCCGCTTCCCCGCGCTCCCGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CNKLFLRDCGLLLHT*RRSKAAASPRSRLR Trigger: CCGCAGCCGGGAGCGCGGGGAAGCGGCCGCTTTCGACCTCCGTCAGGTGTGTAAGAGAAGACCACAGTCTCTTAGGAAAAGTTTGTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092881.4 |
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| CDS-3UTR CAA 90 bp | TTCATTTCCTTTCACAAGGAAAAGGGCTGTTCAGGACATGACAAGAGGTTCCGATGTCTGGGCACCCCCTaGAGGTGCCCGGAGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FISFHKEKGCSGHDKRFRCLGTP*RCPEHQ Trigger: CTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGACA...TCGGAACCTCTTGTCATGTCCTGAACAGCCCTTTTCCTTGTGAAAGGAAATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CAA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTTGTCTGGGCACCCCCTaGAGGTGCCCGGAGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKSENQIPEQHSISYIIPCLGTP*RCPEHQ Trigger: CTGGTGCTCCGGGCACCTCAAGGGGGTGCCCAGACA...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGGCTCAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATTCCTCCACGTGGCAGTaGGCAAAATATCTCCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRAQKSENQIPEQHSISYSSTWQ*AKYLPL Trigger: CAGCGGGAGATATTTTGCCAACTGCCACGTGGAGGA...ATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTGAGCCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGAATCTGGGGTTACAGTGTCTCTTAGGAAGTAGTATTCATTTCCTTTCAAGCCCTGCCAACTTCTaGGTAGCTTTCCATAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLNLGLQCLLGSSIHFLSSPANF*VAFHSL Trigger: AAGGCTATGGAAAGCTACCAAGAAGTTGGCAGGGCT...TGAAAGGAAATGAATACTACTTCCTAAGAGACACTGTAACCCCAGATTCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS-3UTR CAA 90 bp | CAGAAATCTGAAAATCAAATTCCAGAGCAACACAGTATCTCATATATCATCCCTTCCTCCACGTGGCAGTaGGCAAAATATCTCCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKSENQIPEQHSISYIIPSSTWQ*AKYLPL Trigger: CAGCGGGAGATATTTTGCCAACTGCCACGTGGAGGA...AGGGATGATATATGAGATACTGTGTTGCTCTGGAATTTGATTTTCAGATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021187.12 ENSMUST00000122342.2 |
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| CDS TCA 72 bp | CTTTTCCTAAGAGACTGTGGTCTTCTCTTACACACCTaGCGGAGGTCGAAAGCGGCCGCTTCCCCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFLRDCGLLLHT*RRSKAAASPRS Trigger: GGAGCGCGGGGAAGCGGCCGCTTTCGACCTCCGTCAGGTGTGTAAGAGAAGACCACAGTCTCTTAGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092881.4 |
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| CDS GCA 72 bp | CCTTCCTCAGCCTCTTCAGGGCTGGAATTACAGGTGTaGACCAGCATGTCCTGCTGTAACAAACTTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSSASSGLELQV*TSMSCCNKLFL Trigger: TAGGAAAAGTTTGTTACAGCAGGACATGCTGGTGCACACCTGTAATTCCAGCCCTGAAGAGGCTGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092881.4 |
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