Pregenerated sensors for DHRS11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034449Ensembl transcript IDs: ENSMUST00000047560.8, ENSMUST00000151496.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGTCTCTCAGCAAGTCTCCCTGGGCACTCGCAGGCAGGAGGGCTaGGCCCACGCCATTCCCACCAGGGCTAGACCACAGCCTCACCGT | + |
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Preference number: 1 (lower is better) Translates to: RVSQQVSLGTRRQEG*AHAIPTRARPQPHR Trigger: ACGGTGAGGCTGTGGTCTAGCCCTGGTGGGAATGGCGTGGGCCCAGCCCTCCTGCCTGCGAGTGCCCAGGGAGACTTGCTGAGAGACTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 90 bp | CCACCAGGGCTAGACCACAGCCTCACCGTGGCCCGGATATGGGTCTaGGCCTCCAGAAGCTCTTGCCTGAGTCCCTCTGTCAGTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PPGLDHSLTVARIWV*ASRSSCLSPSVSAV Trigger: CACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGCCACGGTGAGGCTGTGGTCTAGCCCTGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR TCA 90 bp | TGCTGCCCGAGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATTGTTaGTGCAGATATCCACGCCACTGTGCTGGGATCGGACAGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: CCPRAGCQAGPCRHC*CRYPRHCAGIGQLR Trigger: TCTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCTCGGGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR GCA 90 bp | AGCCTCACCGTGGCCCGGATATGGGTCTGGGCCTCCAGAAGCTCTTaGCTGAGTCCCTCTGTCAGTGCAGTGACGGCATACTTAGTCGCA | + |
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Preference number: 1 (lower is better) Translates to: SLTVARIWVWASRSS*LSPSVSAVTAYLVA Trigger: TGCGACTAAGTATGCCGTCACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGCCACGGTGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR GCA 90 bp | GGCCGGGCCATGCCGGCATTGTTGATGCAGATATCCACGCCACTGTaGTGGGATCGGACAGCTGAGAACATGGAGAGGATGTCCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: GRAMPALLMQISTPL*WDRTAENMERMSSS Trigger: TGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR TCA 90 bp | GACAGTCCCTGTAATGAGCAGCAGCGCCCAGGACTTTTTCACTGTTaGGCGCAGAGTCTCTCAGCAAGTCTCCCTGGGCACTCGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: DSPCNEQQRPGLFHC*AQSLSASLPGHSQA Trigger: TGCCTGCGAGTGCCCAGGGAGACTTGCTGAGAGACTCTGCGCTCAACAGTGAAAAAGTCCTGGGCGCTGCTGCTCATTACAGGGACTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 90 bp | CGGGCCATGCCGGCATTGTTGATGCAGATATCCACGCCACTGTGCTaGGATCGGACAGCTGAGAACATGGAGAGGATGTCCTCCTCATTT | + |
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Preference number: 1 (lower is better) Translates to: RAMPALLMQISTPLC*DRTAENMERMSSSF Trigger: AAATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 90 bp | GACGGCATACTTAGTCGCACTATAGAAATGGATCACAGACTGGGGTaGGACTCGGTGGCCACACATGCTGTTGATGTTAATGATGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: DGILSRTIEMDHRLG*DSVATHAVDVNDVP Trigger: GGGCACATCATTAACATCAACAGCATGTGTGGCCACCGAGTCCCACCCCAGTCTGTGATCCATTTCTATAGTGCGACTAAGTATGCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 90 bp | ATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGTGCTaGTATCACAGTCACTGTGTGATTTCCCTTAGTCCCTCTCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: IYPESCGFLGKSQEC*YHSHCVISLSPSPP Trigger: AGGGGGAGAGGGACTAAGGGAAATCACACAGTGACTGTGATACCAGCACTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGGGCTGGGCCCACGCCATTCCCACCAGGGCTAGACCACAGCCTCACCCTGGGATCGGACAGCTaGGAACATGGAGAGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: GRRAGPTPFPPGLDHSLTLGSDS*EHGEDV Trigger: GACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAG...GGTGAGGCTGTGGTCTAGCCCTGGTGGGAATGGCGTGGGCCCAGCCCTCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CAA 90 bp | GTGCTGCCCGAGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATTGTaGATGCAGATATCCACGCCACTGTGCTGGGATCGGACAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLPESRVSGRAMPAL*MQISTPLCWDRTAE Trigger: CTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCTCGGGCAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTTTCACTGTTGAGCGCAGAGTCTCTCAGCAAGTCTCCCTGGGCACTCGCACCGTGGCCCGGATATaGGTCTGGGCCTCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: DFFTVERRVSQQVSLGTRTVARI*VWASRS Trigger: GCTTCTGGAGGCCCAGACCCATATCCGGGCCACGGT...GCGAGTGCCCAGGGAGACTTGCTGAGAGACTCTGCGCTCAACAGTGAAAAAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTTCTAGGTACATCCCTTTCCTAGGTCAAAAGGAAGAGGCACAGGAGAGCGCAGGAGGCGAGCCGTaGAGGGTGGAGAAGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: APSRYIPFLGQKEEAQESAGGEP*RVEKVG Trigger: TCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGC...GCTCTCCTGTGCCTCTTCCTTTTGACCTAGGAAAGGGATGTACCTAGAAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTGGCTTTGAGGTGACAGTCCCTGTAATGAGCAGCAGCGCCCAGGACTTTGATCACAGACTGGGGTaGGACTCGGTGGCCACACAT | + |
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Preference number: 2 (lower is better) Translates to: ALGFEVTVPVMSSSAQDFDHRLG*DSVATH Trigger: ATGTGTGGCCACCGAGTCCCACCCCAGTCTGTGATC...AAAGTCCTGGGCGCTGCTGCTCATTACAGGGACTGTCACCTCAAAGCCAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGTGGCCACACATGCTGTTGATGTTAATGATGTGCCCGTCGTCTATGTTCCGCCTTCCATCCGCTGGTaGTGCCCGAGAGCAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SVATHAVDVNDVPVVYVPPSIRW*CPRAGC Trigger: ACACCCTGCTCTCGGGCAGCACCAGCGGATGGAAGG...CGGAACATAGACGACGGGCACATCATTAACATCAACAGCATGTGTGGCCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTTCAGTGATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGCTCAGCAAGTCTCCCTaGGCACTCGCAGGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGSVIYPESCGFLGKSQELSKSP*ALAGRR Trigger: CCTCCTGCCTGCGAGTGCCCAGGGAGACTTGCTGAG...CTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTTCAGTGATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGGCCCGGATATGGGTCTaGGCCTCCAGAAGCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: GGSVIYPESCGFLGKSQEARIWV*ASRSSC Trigger: GCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGC...CTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTTCAGTGATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGCCCGAGTGCAGATGCTaGGGGCCAGCACATTCACAT | + |
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Preference number: 2 (lower is better) Translates to: GGSVIYPESCGFLGKSQEPECRC*GPAHSH Trigger: ATGTGAATGTGCTGGCCCTCAGCATCTGCACTCGGG...CTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTTCAGTGATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGCCAGAAGCTCTTGCCTaGGTCCCTCTGTCAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGSVIYPESCGFLGKSQEPEALA*VPLSVQ Trigger: CTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGG...CTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTGTAATGAGCAGCAGCGCCCAGGACTTTTTCACTGTTGAGCGCAGAGTCGGACAGCTGAGAACATaGAGAGGATGTCCTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VPVMSSSAQDFFTVERRVGQLRT*RGCPPH Trigger: ATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCC...GACTCTGCGCTCAACAGTGAAAAAGTCCTGGGCGCTGCTGCTCATTACAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTTCAGTGATTTACCCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGATCACAGTCACTGTGTaGTTTCCCTTAGTCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GGSVIYPESCGFLGKSQEITVTV*FPLVPL Trigger: GAGAGGGACTAAGGGAAATCACACAGTGACTGTGAT...CTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAGGGAAGAGCCAAGAGTGCTGGTATCACAGTCACTGTGTGATTTCCCTTGTTCCGCTCCTTCATaGACTGATAAGCCTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: FSREEPRVLVSQSLCDFPCSAPS*TDKPPE Trigger: CTCGGGAGGCTTATCAGTCCATGAAGGAGCGGAACA...AGGGAAATCACACAGTGACTGTGATACCAGCACTCTTGGCTCTTCCCTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | CAGCAAGTCTCCCTGGGCACTCGCAGGCAGGAGGGCTaGGCCCACGCCATTCCCACCAGGGCTAGACCACAG | + |
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Preference number: 3 (lower is better) Translates to: QQVSLGTRRQEG*AHAIPTRARPQ Trigger: CTGTGGTCTAGCCCTGGTGGGAATGGCGTGGGCCCAGCCCTCCTGCCTGCGAGTGCCCAGGGAGACTTGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | TCACTGTTGAGCGCAGAGTCTCTCAGCAAGTCTCCCTaGGCACTCGCAGGCAGGAGGGCTGGGCCCACGCCA | + |
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Preference number: 3 (lower is better) Translates to: SLLSAESLSKSP*ALAGRRAGPTP Trigger: TGGCGTGGGCCCAGCCCTCCTGCCTGCGAGTGCCCAGGGAGACTTGCTGAGAGACTCTGCGCTCAACAGTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR TCA 72 bp | AGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATTGTTaGTGCAGATATCCACGCCACTGTGCTGGGATCGGA | + |
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Preference number: 3 (lower is better) Translates to: RAGCQAGPCRHC*CRYPRHCAGIG Trigger: TCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR GCA 72 bp | GTGGCCCGGATATGGGTCTGGGCCTCCAGAAGCTCTTaGCTGAGTCCCTCTGTCAGTGCAGTGACGGCATAC | + |
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Preference number: 3 (lower is better) Translates to: VARIWVWASRSS*LSPSVSAVTAY Trigger: GTATGCCGTCACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR TCA 72 bp | CTCTCCCCCTCAAATCGTAAGTCCGGCCCTTGGCTTTaGGGTGACAGTCCCTGTAATGAGCAGCAGCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LSPSNRKSGPWL*GDSPCNEQQRP Trigger: TGGGCGCTGCTGCTCATTACAGGGACTGTCACCTCAAAGCCAAGGGCCGGACTTACGATTTGAGGGGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR TCA 72 bp | GAACCTGGAACCCTGGACAACCACACAGGTAAAAGATaGGGTCTCTGCTGCTCCAACCCTAAGGGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: EPGTLDNHTGKR*GLCCSNPKGWG Trigger: CCCCCACCCCTTAGGGTTGGAGCAGCAGAGACCTCATCTTTTACCTGTGTGGTTGTCCAGGGTTCCAGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| 3UTR TCA 72 bp | TGTAATGAGCAGCAGCGCCCAGGACTTTTTCACTGTTaGGCGCAGAGTCTCTCAGCAAGTCTCCCTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CNEQQRPGLFHC*AQSLSASLPGH Trigger: GTGCCCAGGGAGACTTGCTGAGAGACTCTGCGCTCAACAGTGAAAAAGTCCTGGGCGCTGCTGCTCATTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | CCGGCATTGTTGATGCAGATATCCACGCCACTGTGCTaGGATCGGACAGCTGAGAACATGGAGAGGATGTCC | + |
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Preference number: 3 (lower is better) Translates to: PALLMQISTPLC*DRTAENMERMS Trigger: GGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR GCA 72 bp | GGCCTCCAGAAGCTCTTGCCTGAGTCCCTCTGTCAGTaGAGTGACGGCATACTTAGTCGCACTATAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: GLQKLLPESLCQ*SDGILSRTIEM Trigger: CATTTCTATAGTGCGACTAAGTATGCCGTCACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | GAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGTGCTaGTATCACAGTCACTGTGTGATTTCCCTTAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ESCGFLGKSQEC*YHSHCVISLSP Trigger: GGGACTAAGGGAAATCACACAGTGACTGTGATACCAGCACTCTTGGCTCTTCCCTAGAAAACCACAGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | GGCTTAGGGAGGTTCAGTGATTTACCCAGAGTCCTGTaGTTTTCTAGGGAAGAGCCAAGAGTGCTGGTATCA | + |
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Preference number: 3 (lower is better) Translates to: GLGRFSDLPRVL*FSREEPRVLVS Trigger: TGATACCAGCACTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGGGTAAATCACTGAACCTCCCTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR GCA 72 bp | CCAGAGTCCTGTGGTTTTCTAGGGAAGAGCCAAGAGTaGTGGTATCACAGTCACTGTGTGATTTCCCTTAGT | + |
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Preference number: 3 (lower is better) Translates to: PESCGFLGKSQE*WYHSHCVISLS Trigger: ACTAAGGGAAATCACACAGTGACTGTGATACCAGCACTCTTGGCTCTTCCCTAGAAAACCACAGGACTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CCA 72 bp | CTTAGTCGCACTATAGAAATGGATCACAGACTGGGGTaGGACTCGGTGGCCACACATGCTGTTGATGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LSRTIEMDHRLG*DSVATHAVDVN Trigger: ATTAACATCAACAGCATGTGTGGCCACCGAGTCCCACCCCAGTCTGTGATCCATTTCTATAGTGCGACTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTTCTAGGTACATCCCTTTCCTAGGTCAAAAGGAAGAGGCACAGGAGAGCGGCTCCCGTCACCAGTaGCAGCCGGTCGCGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: APSRYIPFLGQKEEAQESGSRHQ*QPVAPP Trigger: CGGTGGCGCGACCGGCTGGCACTGGTGACGGGAGCC...GCTCTCCTGTGCCTCTTCCTTTTGACCTAGGAAAGGGATGTACCTAGAAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | GCCCGAGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATTGTTGATGCAGATATCACCTTCAGTCCCTGCTaGACTAATGCCCGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: AREQGVRPGHAGIVDADITFSPC*TNARAT Trigger: CGTGGCCCGGGCATTAGTCCAGCAGGGACTGAAGGT...GATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCTCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGTAGGATCTCCCCACAGAACCACGTGGCCCGGATATaGGTCTGGGCCTCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGRRRAVKGGEGRISPQNHVARI*VWASRS Trigger: GCTTCTGGAGGCCCAGACCCATATCCGGGCCACGTG...GTTCTGTGGGGAGATCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| 3UTR CAA 72 bp | GAGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATTGTaGATGCAGATATCCACGCCACTGTGCTGGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: ESRVSGRAMPAL*MQISTPLCWDR Trigger: CCGATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| 3UTR CAA 72 bp | CCCGAGAGCAGGGTGTCAGGCCGGGCCATGCCGGCATaGTTGATGCAGATATCCACGCCACTGTGCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PESRVSGRAMPA*LMQISTPLCWD Trigger: ATCCCAGCACAGTGGCGTGGATATCTGCATCAACAATGCCGGCATGGCCCGGCCTGACACCCTGCTCTCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGTAGGATCTCCCCACAGAACACCTTCAGTCCCTGCTaGACTAATGCCCGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: RGRRRAVKGGEGRISPQNTFSPC*TNARAT Trigger: CGTGGCCCGGGCATTAGTCCAGCAGGGACTGAAGGT...GTTCTGTGGGGAGATCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | GGTTTTCTAGGGAAGAGCCAAGAGTGCTGGTATCACAGTCACTGTGTGATTTCCGGCTCCCGTCACCAGTaGCAGCCGGTCGCGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: GFLGKSQECWYHSHCVISGSRHQ*QPVAPP Trigger: CGGTGGCGCGACCGGCTGGCACTGGTGACGGGAGCC...GGAAATCACACAGTGACTGTGATACCAGCACTCTTGGCTCTTCCCTAGAAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| CDS-3UTR TCA 90 bp | CACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGTAGGATCCTGGGATCGGACAGCTaGGAACATGGAGAGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: HLKSRGRRRAVKGGEGRILGSDS*EHGEDV Trigger: GACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAG...GATCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCTGGATTTTAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR TCA 90 bp | GCTGCAGAGTCCAGAAATCAACACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGCCAGAAGCTCTTGCCTaGGTCCCTCTGTCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: AAESRNQHLKSRGRRRAVPEALA*VPLSVQ Trigger: CTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGG...CACGGCTCGCCTCCTGCCTCTGGATTTTAGGTGTTGATTTCTGGACTCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | GACTTTTTCACTGTTGAGCGCAGAGTCTCTCAGCAAGTCTCCCTGGGCACTCGCACAACCTTCAGTCCCTaGTGGACTAATGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DFFTVERRVSQQVSLGTRTTFSP*WTNARA Trigger: GGCCCGGGCATTAGTCCAGCAGGGACTGAAGGTTGT...GCGAGTGCCCAGGGAGACTTGCTGAGAGACTCTGCGCTCAACAGTGAAAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151496.2 |
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| CDS-3UTR TCA 90 bp | TCAAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGCCCGAGTGCAGATGCTaGGGGCCAGCACATTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SKGRGTGEQRLRSPKRTQPECRC*GPAHSH Trigger: ATGTGAATGTGCTGGCCCTCAGCATCTGCACTCGGG...CTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGTAGGATCTCCCCACAGAACCCACGTCCTCTGGTCTaGGACACTTTATGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGRRRAVKGGEGRISPQNPRPLV*DTLCVH Trigger: ATGAACACATAAAGTGTCTCAGACCAGAGGACGTGG...GTTCTGTGGGGAGATCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR TCA 90 bp | CACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGTAGGATCTGGATGTCACCAACCTaGACATGTGGGGGTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: HLKSRGRRRAVKGGEGRIWMSPT*TCGGVL Trigger: TAGCACACCCCCACATGTTCAGGTTGGTGACATCCA...GATCCTACCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCTGGATTTTAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGAACCAGCTCCTCGATGTTaGCAACGGTGCGGGCACAAC | + |
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Preference number: 4 (lower is better) Translates to: KRKRHRRAKVTEPQEDSEPAPRC*QRCGHN Trigger: GTTGTGCCCGCACCGTTGGCAACATCGAGGAGCTGG...TTCTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGAAACAACCTTCAGTCCCTaGTGGACTAATGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KRKRHRRAKVTEPQEDSETTFSP*WTNARA Trigger: GGCCCGGGCATTAGTCCAGCAGGGACTGAAGGTTGT...TTCTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | AAATCAACACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGAAGGGTGGAGAAGGGCCTCCAGAAGCTCTTaGCTGAGTCCCTCTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: KSTPKIQRQEASREGWRRASRSS*LSPSVS Trigger: ACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGC...CCTTCTCCACCCTTCACGGCTCGCCTCCTGCCTCTGGATTTTAGGTGTTGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGAATTCATAGGTGGCAGCTaGTTCCCCCGGGTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KRKRHRRAKVTEPQEDSEFIGGS*FPRVLV Trigger: GACAAGGACCCGGGGGAAGCAGCTGCCACCTATGAA...TTCTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTAGGTCAAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGGATCACAGACTGGGGTaGGACTCGGTGGCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: FPRSKGRGTGEQRLRSPKDHRLG*DSVATH Trigger: ATGTGTGGCCACCGAGTCCCACCCCAGTCTGTGATC...CTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTTGACCTAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | CACATTTGTAATGGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGGACTCCATCCGCTGGTGCTaGCCGAGAGCAGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HICNGNSLTSCLSLSGVDSIRWC*PRAGCQ Trigger: CTGACACCCTGCTCTCGGGCAGCACCAGCGGATGGA...GTCCACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCCATTACAAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | GGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGGACATAGAAAGTAAGCCTTCCATCCGCTGGTaGTGCCCGAGAGCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GNSLTSCLSLSGVDIESKPSIRW*CPRAGC Trigger: ACACCCTGCTCTCGGGCAGCACCAGCGGATGGAAGG...CTTACTTTCTATGTCCACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CGGAGCCCCAAGAGGACTCAGAAGAAGTTAGATAGAACAGTCGAGATTCTGTCTGCCCGGATATGGGTCTaGGCCTCCAGAAGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RSPKRTQKKLDRTVEILSARIWV*ASRSSC Trigger: GCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGC...AGACAGAATCTCGACTGTTCTATCTAACTTCTTCTGAGTCCTCTTGGGGCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCAAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGATTATGTGTTCATAGGTaGCAGCTGCTTCCCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LGQKEEAQESKGYGAPRGLCVHR*QLLPPG Trigger: ACCCGGGGGAAGCAGCTGCCACCTATGAACACATAA...TCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTTGACCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGAAGAAGCCTTGTCATGGAGTTTaGAGGCGAACTGTGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GRGTGEQRLRSPKRTQKKPCHGV*RRTVSL Trigger: TAGAGACACAGTTCGCCTTCAAACTCCATGACAAGG...CTTCTTCTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR GCA 90 bp | GCTGCAGAGTCCAGAAATCAACACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGTTGATGTTAATGATGTaGCCGTCGTCTATGTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: AAESRNQHLKSRGRRRAVLMLMM*PSSMFR Trigger: GCGGAACATAGACGACGGGCACATCATTAACATCAA...CACGGCTCGCCTCCTGCCTCTGGATTTTAGGTGTTGATTTCTGGACTCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | GGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGGACATAGAAAGTAAGCTGGAGAGATACACGTaGCCCGGATATGGGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GNSLTSCLSLSGVDIESKLERYT*PGYGSG Trigger: CCCAGACCCATATCCGGGCCACGTGTATCTCTCCAG...CTTACTTTCTATGTCCACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCAAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGAACCAACCTGAACATGTaGGGGTGTGCTAAGAACGTA | + |
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Preference number: 4 (lower is better) Translates to: LGQKEEAQESKGYGAPRGTNLNM*GCAKNV Trigger: TACGTTCTTAGCACACCCCCACATGTTCAGGTTGGT...TCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTTGACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CGGAGCCCCAAGAGGACTCAGAAGAAGTTAGATAGAACAGTCGAGATTCTGTCTAGGTCACCTGCTCTGTaGGCCTCATCTGGATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RSPKRTQKKLDRTVEILSRSPAL*ASSGCH Trigger: GTGACATCCAGATGAGGCCCACAGAGCAGGTGACCT...AGACAGAATCTCGACTGTTCTATCTAACTTCTTCTGAGTCCTCTTGGGGCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CGGAGCCCCAAGAGGACTCAGAAGAAGTTAGATAGAACAGTCGAGATTCTGTCTGGACAGCTGAGAACATaGAGAGGATGTCCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSPKRTQKKLDRTVEILSGQLRT*RGCPPH Trigger: ATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCC...AGACAGAATCTCGACTGTTCTATCTAACTTCTTCTGAGTCCTCTTGGGGCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | CACATTTGTAATGGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGGACCCCGGGTCCTTGTCATaGAGTTTGAAGGCGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: HICNGNSLTSCLSLSGVDPGSLS*SLKANC Trigger: ACAGTTCGCCTTCAAACTCCATGACAAGGACCCGGG...GTCCACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCCATTACAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR TCA 90 bp | GGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGGACATAGAAAGTAAGGATGTCCTCCTCATTTaGCAGGTCACATCTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GNSLTSCLSLSGVDIESKDVLLI*QVTSVG Trigger: CCCTACAGATGTGACCTGTCAAATGAGGAGGACATC...CTTACTTTCTATGTCCACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CCA 90 bp | TTTCACATTTGTAATGGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGTGTGTTCCGCTCCTTCATaGACTGATAAGCCTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: FHICNGNSLTSCLSLSGVCSAPS*TDKPPE Trigger: CTCGGGAGGCTTATCAGTCCATGAAGGAGCGGAACA...CACCCCACTAAGGGATAGACAGCTTGTCAGACTATTCCCATTACAAATGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 90 bp | CCTTCAGTCCCTGCTGGACTAATGCCCGGGCCACGGCCGCACCGATaGCCCCCGAGGCTCCCGTCACCAGTGCCAGCCGGTCGCGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PSVPAGLMPGPRPHR*PPRLPSPVPAGRAT Trigger: GGTGGCGCGACCGGCTGGCACTGGTGACGGGAGCCTCGGGGGGCATCGGTGCGGCCGTGGCCCGGGCATTAGTCCAGCAGGGACTGAAGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047560.8 ENSMUST00000151496.2 |
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| CDS CCA 90 bp | GTCTCTACCAAGCCTGGAGAGATACACGTGGCCCGGATATGGGTCTaGGCCTCCAGAAGCTCTTGCCTGAGTCCCTCTGTCAGTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: VSTKPGEIHVARIWV*ASRSSCLSPSVSAV Trigger: CACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGCCACGTGTATCTCTCCAGGCTTGGTAGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 90 bp | GAGATACACGTGGCCCGGATATGGGTCTGGGCCTCCAGAAGCTCTTaGCTGAGTCCCTCTGTCAGTGCAGTGACGGCATACTTAGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: EIHVARIWVWASRSS*LSPSVSAVTAYLVA Trigger: TGCGACTAAGTATGCCGTCACTGCACTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCCCAGACCCATATCCGGGCCACGTGTATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CAA 90 bp | CTAGGTCAAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGAGCTTCCCCCGGGTCCTaGTCATGGAGTTTGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LGQKEEAQESKGYGAPRGASPGS*SWSLKA Trigger: CGCCTTCAAACTCCATGACAAGGACCCGGGGGAAGC...TCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTTGACCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS TCA 90 bp | GTTCATAGGTGGCAGCTGCTTCCCCCGGGTCCTTGTCATGGAGTTTaGAGGCGAACTGTGTCTCTACCAAGCCTGGAGAGATACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: VHRWQLLPPGPCHGV*RRTVSLPSLERYTW Trigger: CCACGTGTATCTCTCCAGGCTTGGTAGAGACACAGTTCGCCTTCAAACTCCATGACAAGGACCCGGGGGAAGCAGCTGCCACCTATGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGAAGAGGCACAGGAGAGCAAAGGTTACGGAGCCCCAAGAGGACTCAGAACGGGCCATGCCGGCATaGTTGATGCAGATATCCACG | + |
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Preference number: 5 (lower is better) Translates to: KRKRHRRAKVTEPQEDSERAMPA*LMQIST Trigger: CGTGGATATCTGCATCAACAATGCCGGCATGGCCCG...TTCTGAGTCCTCTTGGGGCTCCGTAACCTTTGCTCTCCTGTGCCTCTTCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 90 bp | CACGTCCTCTGGTCTGAGACACTTTATGTGTTCATAGGTGGCAGCTaGTTCCCCCGGGTCCTTGTCATGGAGTTTGAAGGCGAACTGTGT | + |
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Preference number: 5 (lower is better) Translates to: HVLWSETLYVFIGGS*FPRVLVMEFEGELC Trigger: ACACAGTTCGCCTTCAAACTCCATGACAAGGACCCGGGGGAAGCAGCTGCCACCTATGAACACATAAAGTGTCTCAGACCAGAGGACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CCA 90 bp | TGCAGATATCCACGCCACTGTGCTGGGATCGGACAGCTGAGAACATaGAGAGGATGTCCTCCTCATTTGACAGGTCACATCTGTAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: CRYPRHCAGIGQLRT*RGCPPHLTGHICRG Trigger: TCCCCTACAGATGTGACCTGTCAAATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGCACAGTGGCGTGGATATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CAA 90 bp | GCCCCTTCTAGGTACATCCCTTTCCTAGGTCAAAAGGAAGAGGCACAGGAGAGCGGATGTCCTCCTCATTaGACAGGTCACATCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: APSRYIPFLGQKEEAQESGCPPH*TGHICR Trigger: CCTACAGATGTGACCTGTCAAATGAGGAGGACATCC...GCTCTCCTGTGCCTCTTCCTTTTGACCTAGGAAAGGGATGTACCTAGAAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CAA 90 bp | GCTGCAGAGTCCAGAAATCAACACCTAAAATCCAGAGGCAGGAGGCGAGCCGTGTCCTTGTCATGGAGTTaGAAGGCGAACTGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAESRNQHLKSRGRRRAVSLSWS*KANCVS Trigger: AGAGACACAGTTCGCCTTCAAACTCCATGACAAGGA...CACGGCTCGCCTCCTGCCTCTGGATTTTAGGTGTTGATTTCTGGACTCTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS-3UTR CAA 90 bp | GTTTTTCACATTTGTAATGGGAATAGTCTGACAAGCTGTCTATCCCTTAGTGGGGGCCTCCAGAAGCTCTaGCCTGAGTCCCTCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFHICNGNSLTSCLSLSGGLQKL*PESLCQ Trigger: CTGACAGAGGGACTCAGGCAAGAGCTTCTGGAGGCC...CCCACTAAGGGATAGACAGCTTGTCAGACTATTCCCATTACAAATGTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 72 bp | CCTGCTGGACTAATGCCCGGGCCACGGCCGCACCGATaGCCCCCGAGGCTCCCGTCACCAGTGCCAGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PAGLMPGPRPHR*PPRLPSPVPAG Trigger: ACCGGCTGGCACTGGTGACGGGAGCCTCGGGGGGCATCGGTGCGGCCGTGGCCCGGGCATTAGTCCAGCAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047560.8 ENSMUST00000151496.2 |
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| CDS CCA 72 bp | ACGGTGCGGGCACAACCCACAACCTTCAGTCCCTGCTaGACTAATGCCCGGGCCACGGCCGCACCGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TVRAQPTTFSPC*TNARATAAPMP Trigger: GGGCATCGGTGCGGCCGTGGCCCGGGCATTAGTCCAGCAGGGACTGAAGGTTGTGGGTTGTGCCCGCACCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047560.8 ENSMUST00000151496.2 |
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| CDS GCA 72 bp | CCAACGGTGCGGGCACAACCCACAACCTTCAGTCCCTaGTGGACTAATGCCCGGGCCACGGCCGCACCGATG | + |
|
Preference number: 6 (lower is better) Translates to: PTVRAQPTTFSP*WTNARATAAPM Trigger: CATCGGTGCGGCCGTGGCCCGGGCATTAGTCCAGCAGGGACTGAAGGTTGTGGGTTGTGCCCGCACCGTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047560.8 ENSMUST00000151496.2 |
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| CDS GCA 72 bp | TACATTCAGCAGCCAGCTCCTCGATGTTGCCAACGGTaGGGGCACAACCCACAACCTTCAGTCCCTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YIQQPAPRCCQR*GHNPQPSVPAG Trigger: TCCAGCAGGGACTGAAGGTTGTGGGTTGTGCCCGCACCGTTGGCAACATCGAGGAGCTGGCTGCTGAATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CAA 72 bp | CCTGCACTCTTACATTCAGCAGCCAGCTCCTCGATGTaGCCAACGGTGCGGGCACAACCCACAACCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PALLHSAASSSM*PTVRAQPTTFS Trigger: ACTGAAGGTTGTGGGTTGTGCCCGCACCGTTGGCAACATCGAGGAGCTGGCTGCTGAATGTAAGAGTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CAA 90 bp | GCTGGGATCGGACAGCTGAGAACATGGAGAGGATGTCCTCCTCATTaGACAGGTCACATCTGTAGGGGATCAAAGTCCCGGGGTAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGIGQLRTWRGCPPH*TGHICRGSKSRGSL Trigger: CAGGCTACCCCGGGACTTTGATCCCCTACAGATGTGACCTGTCAAATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CCA 72 bp | CCACGCCACTGTGCTGGGATCGGACAGCTGAGAACATaGAGAGGATGTCCTCCTCATTTGACAGGTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: PRHCAGIGQLRT*RGCPPHLTGHI Trigger: GATGTGACCTGTCAAATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCCGATCCCAGCACAGTGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CCA 72 bp | ATGGAGTTTGAAGGCGAACTGTGTCTCTACCAAGCCTaGAGAGATACACGTGGCCCGGATATGGGTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MEFEGELCLYQA*RDTRGPDMGLG Trigger: GCCCAGACCCATATCCGGGCCACGTGTATCTCTCCAGGCTTGGTAGAGACACAGTTCGCCTTCAAACTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 72 bp | GTCACATCTGTAGGGGATCAAAGTCCCGGGGTAGCCTaGACTCTTACATTCAGCAGCCAGCTCCTCGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VTSVGDQSPGVA*TLTFSSQLLDV Trigger: AACATCGAGGAGCTGGCTGCTGAATGTAAGAGTGCAGGCTACCCCGGGACTTTGATCCCCTACAGATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS GCA 72 bp | TGGTCTGAGACACTTTATGTGTTCATAGGTGGCAGCTaGTTCCCCCGGGTCCTTGTCATGGAGTTTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WSETLYVFIGGS*FPRVLVMEFEG Trigger: GCCTTCAAACTCCATGACAAGGACCCGGGGGAAGCAGCTGCCACCTATGAACACATAAAGTGTCTCAGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CAA 72 bp | GGACAGCTGAGAACATGGAGAGGATGTCCTCCTCATTaGACAGGTCACATCTGTAGGGGATCAAAGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GQLRTWRGCPPH*TGHICRGSKSR Trigger: CCGGGACTTTGATCCCCTACAGATGTGACCTGTCAAATGAGGAGGACATCCTCTCCATGTTCTCAGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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| CDS CCA 72 bp | GCTAAGAACGTAGATGACAGCCTCAGCCACGTCCTCTaGTCTGAGACACTTTATGTGTTCATAGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AKNVDDSLSHVL*SETLYVFIGGS Trigger: GCTGCCACCTATGAACACATAAAGTGTCTCAGACCAGAGGACGTGGCTGAGGCTGTCATCTACGTTCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047560.8 |
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