Pregenerated sensors for DHODH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031730Ensembl transcript IDs: ENSMUST00000123605.9, ENSMUST00000128350.3, ENSMUST00000133353.8, ENSMUST00000143900.8, ENSMUST00000150804.3
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCACGACTGGTGGCCCCAAGAAGGTGAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCCTGGATCTTCTCCAAGGCATCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LATTGGPKKVRAVYS*TREAPAWIFSKASC Trigger: ACAGGATGCCTTGGAGAAGATCCAGGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCTCACCTTCTTGGGGCCACCAGTCGTGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR TCA 90 bp | TGGGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCTGGCTTCTaGGGTCCCTTCAAGGCGTCCCTCTCCTGCAGCACCTTGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: WAVRSGAIFTSTAGF*GPFKASLSCSTLDS Trigger: GCTGTCCAAGGTGCTGCAGGAGAGGGACGCCTTGAAGGGACCTCAGAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR TCA 90 bp | CCAGCTCTCTGGCCACGCTGGCAATGTCCTCCTTGTCCTGGGCCGTaGGGTCAGGGGCAATCTTCACCAGCACCGCTGGCTTCTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: PALWPRWQCPPCPGP*GQGQSSPAPLASEV Trigger: GACCTCAGAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | TCGATGCCCAGCTCTCTGGCCACGCTGGCAATGTCCTCCTTGTCCTaGGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SMPSSLATLAMSSLS*AVRSGAIFTSTAGF Trigger: GAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGCTGGGCATCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | CTTGTCCTGGGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCTaGCTTCTGAGGTCCCTTCAAGGCGTCCCTCTCCTGCAGCACCTT | + |
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Preference number: 1 (lower is better) Translates to: LVLGREVRGNLHQHR*LLRSLQGVPLLQHL Trigger: AAGGTGCTGCAGGAGAGGGACGCCTTGAAGGGACCTCAGAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR GCA 90 bp | CCCAGGTTTATTCCCAGAGGCAGCCCATCTGTGGTGAGCTGGGTCTaGTTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: PRFIPRGSPSVVSWV*FCCLARSLCSTAES Trigger: GCTCTCAGCGGTGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCCTCTGGGAATAAACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
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| 3UTR CCA 90 bp | CACCTCAGTGACACAGTGAGTCAGCTGGGGACCTCCTGCCCCAGCTaGGTGAGCCCTTCAGGTGTACCCATTAACGCCCTTTCAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: HLSDTVSQLGTSCPS*VSPSGVPINALSGG Trigger: TCCACCTGAAAGGGCGTTAATGGGTACACCTGAAGGGCTCACCCAGCTGGGGCAGGAGGTCCCCAGCTGACTCACTGTGTCACTGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | AGTGGCTTCCCACTCAGTCCCCCTGTCTCAGAGCGCAGAGCACCCTaGAGGCCAACAGGGCGACTCACTGTGGTATTTGTGATGATCAGT | + |
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Preference number: 1 (lower is better) Translates to: SGFPLSPPVSERRAP*RPTGRLTVVFVMIS Trigger: ACTGATCATCACAAATACCACAGTGAGTCGCCCTGTTGGCCTCCAGGGTGCTCTGCGCTCTGAGACAGGGGGACTGAGTGGGAAGCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR GCA 90 bp | CACGACTGGCTTGTGCAGTCCATCGAGGCCACAGTTCAAGGGACATaGTTTGAGACAGCTCTCCCTCTCAGGACTCAGTCACGCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: HDWLVQSIEATVQGT*FETALPLRTQSRSL Trigger: CAAGCTGCGTGACTGAGTCCTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGAACTGTGGCCTCGATGGACTGCACAAGCCAGTCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| 3UTR CCA 90 bp | TTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: FCCLARSLCSTAESP*LLNPYLVCLQLSPE Trigger: TTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACGGGCCAGACAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
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| 3UTR CCA 90 bp | CAATGGCTGAGCCAGCTGACTCTCTTCAAGTGTGACTTGGGAGCCTaGACGAGGGTGTCCACTGCAGCTCTAGGAGACATCGAATACTGG | + |
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Preference number: 1 (lower is better) Translates to: QWLSQLTLFKCDLGA*TRVSTAALGDIEYW Trigger: CCAGTATTCGATGTCTCCTAGAGCTGCAGTGGACACCCTCGTCCAGGCTCCCAAGTCACACTTGAAGAGAGTCAGCTGGCTCAGCCATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR GCA 90 bp | GTAGTCGGCCAAGGGGCCCAGGATGCGAACACCCTCTACATAGTCTaGAGCAGCATCCACCGAAGTCTTATTCTTCCCCAGGTTTATTCC | + |
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Preference number: 1 (lower is better) Translates to: VVGQGAQDANTLYIV*SSIHRSLILPQVYS Trigger: GGAATAAACCTGGGGAAGAATAAGACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGTGTTCGCATCCTGGGCCCCTTGGCCGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
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| 3UTR GCA 90 bp | ATTGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCACATaGTGCAGTAAGCTCCAGGTCAGCCTGGTCTACAAAGCAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: IVFERLQPVAGRGGT*CSKLQVSLVYKASS Trigger: GGAACTTGCTTTGTAGACCAGGCTGACCTGGAGCTTACTGCAGCATGTGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR TCA 90 bp | GTGTCTTTAAGCCAAAGCAGTCCTGATGGAGGAACTGAGCTGCAGTaGCCTGAAGTAACTCTTCCCAGGCCAGCTCAATGTCACTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VSLSQSSPDGGTELQ*PEVTLPRPAQCHSP Trigger: GGGGGAGTGACATTGAGCTGGCCTGGGAAGAGTTACTTCAGGTCACTGCAGCTCAGTTCCTCCATCAGGACTGCTTTGGCTTAAAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | CTGGGCACAGAACCCATCTCAGAAGCAGATTACCATGGAGATCAATaGCTGAGCCAGCTGACTCTCTTCAAGTGTGACTTGGGAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LGTEPISEADYHGDQ*LSQLTLFKCDLGAW Trigger: CCAGGCTCCCAAGTCACACTTGAAGAGAGTCAGCTGGCTCAGCCATTGATCTCCATGGTAATCTGCTTCTGAGATGGGTTCTGTGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | GATGAAAGGCTGAACAACTCTAAGCACAGACTACCCACAGCACAGTaGACACATCTGTGGATGCTTCTGTGCACTGGGGACATTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: DERLNNSKHRLPTAQ*THLWMLLCTGDILQ Trigger: TTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGTCTGTGCTTAGAGTTGTTCAGCCTTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | TCTATGTGGCTGGCACGTTCTCCTGTTCAGGTCTTCACAGGCAACTaGACAAAGAAGTACTGGGCACAGAACCCATCTCAGAAGCAGATT | + |
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Preference number: 1 (lower is better) Translates to: SMWLARSPVQVFTGN*TKKYWAQNPSQKQI Trigger: AATCTGCTTCTGAGATGGGTTCTGTGCCCAGTACTTCTTTGTCCAGTTGCCTGTGAAGACCTGAACAGGAGAACGTGCCAGCCACATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR GCA 90 bp | ACTCTAAGCACAGACTACCCACAGCACAGTGGACACATCTGTGGATaGTTCTGTGCACTGGGGACATTCTGCAAATGGAGATCATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: TLSTDYPQHSGHICG*FCALGTFCKWRSFL Trigger: CAGAAATGATCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGTCTGTGCTTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | ACTACCCACAGCACAGTGGACACATCTGTGGATGCTTCTGTGCACTaGGGACATTCTGCAAATGGAGATCATTTCTGCAGAGTGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TTHSTVDTSVDASVH*GHSANGDHFCRVRF Trigger: AAACCTCACTCTGCAGAAATGATCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | AACAACTCTAAGCACAGACTACCCACAGCACAGTGGACACATCTGTaGATGCTTCTGTGCACTGGGGACATTCTGCAAATGGAGATCATT | + |
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Preference number: 1 (lower is better) Translates to: NNSKHRLPTAQWTHL*MLLCTGDILQMEII Trigger: AATGATCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGTCTGTGCTTAGAGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CCA 90 bp | CGTTCTCCTGTTCAGGTCTTCACAGGCAACTGGACAAAGAAGTACTaGGCACAGAACCCATCTCAGAAGCAGATTACCATGGAGATCAAT | + |
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Preference number: 1 (lower is better) Translates to: RSPVQVFTGNWTKKY*AQNPSQKQITMEIN Trigger: ATTGATCTCCATGGTAATCTGCTTCTGAGATGGGTTCTGTGCCCAGTACTTCTTTGTCCAGTTGCCTGTGAAGACCTGAACAGGAGAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCAGGCGGCGCAGCTCAGTCTTTCCCTGTAGGCTCCTCAGGCCAGCAGTGCAGGAAGGCCCACCATaGACGTGGGCACCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: DSRRRSSVFPCRLLRPAVQEGPP*TWAPPS Trigger: GGATGGTGGTGCCCACGTTCATGGTGGGCCTTCCTG...CACTGCTGGCCTGAGGAGCCTACAGGGAAAGACTGAGCTGCGCCGCCTGCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| 3UTR CAA 90 bp | AGTCCGTCGATGCCCAGCTCTCTGGCCACGCTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCT | + |
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Preference number: 2 (lower is better) Translates to: SPSMPSSLATLAMSS*SWAVRSGAIFTSTA Trigger: AGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGCTGGGCATCGACGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGATGTGGTGAGCTGGGTCTaGTTCTGCTGTCTGGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: VEAQGFRIRAETRPPRRDVVSWV*FCCLAR Trigger: ACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCAC...ATCCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCTGCGTACATCTTACTGGCAGACAGCCAGACTCACAGGAGGCAACATCGAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TGCVHLTGRQPDSQEATSRAVYS*TREAPA Trigger: GGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCT...CGATGTTGCCTCCTGTGAGTCTGGCTGTCTGCCAGTAAGATGTACGCAGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGTTGGTAGGCGCCTTTTaGGTGGGGCTTCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RVEAQGFRIRAETRPPRRLVGAF*VGLQAG Trigger: ACCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAA...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGTCAAGGGACATGCTTTaGGACAGCTCTCCCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GEPPTDQEWRLRASESGQSRDML*DSSPSQ Trigger: CTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGA...CTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCGAGCCACAAGCAAGCAAGCAAGTGGACAGCACTCCTCCATGGATGGCCACCAGGGAGGCCCCTaGCTGGATCTTCTCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SERATSKQASGQHSSMDGHQGGP*LDLLQG Trigger: GCCTTGGAGAAGATCCAGGCAGGGGCCTCCCTGGTG...GCCATCCATGGAGGAGTGCTGTCCACTTGCTTGCTTGCTTGTGGCTCGCTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCACATGCTGCAGTACCTGGCCACGACTGGTaGCCCCAAGAAGGTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSLRGFSQLLGVVAHAAVPGHDW*PQEGEG Trigger: GCCCTCACCTTCTTGGGGCCACCAGTCGTGGCCAGG...TACTGCAGCATGTGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCGGCCAAGGGGCCCAGGATGCGAACACCCTCTACATAGTCTGCAGCAGCATTTGGTAGGCGCCTTTTaGGTGGGGCTTCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SRPRGPGCEHPLHSLQQHLVGAF*VGLQAG Trigger: ACCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAA...ATGCTGCTGCAGACTATGTAGAGGGTGTTCGCATCCTGGGCCCCTTGGCCGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR CCA 90 bp | TTGATATGGGAGGGCCCTGATCACTGTGGTTGGTGCTGCCCTTGGGCAAGTTGTAGGGAGGCCCCTGCCTaGATCTTCTCCAAGGCATCC | + |
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Preference number: 2 (lower is better) Translates to: LIWEGPDHCGWCCPWASCREAPA*IFSKAS Trigger: GGATGCCTTGGAGAAGATCCAGGCAGGGGCCTCCCT...ACAACTTGCCCAAGGGCAGCACCAACCACAGTGATCAGGGCCCTCCCATATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CAA 90 bp | AAGCGTGCCAAGGCACTCATGGGGAAAGCCGTGTTGACATTGTCTTaGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCACATGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KRAKALMGKAVLTLS*RGFSQLLGVVAHAA Trigger: TGCAGCATGTGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAATGTCAACACGGCTTTCCCCATGAGTGCCTTGGCACGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CAA 90 bp | AGGGCCCTGATCACTGTGGTTGGTGCTGCCCTTGGGCAAGTTGTCTaGGATCTGAGCGAGCCACAAGCAAGCAAGCAAGTGGACAGCACT | + |
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Preference number: 2 (lower is better) Translates to: RALITVVGAALGQVV*DLSEPQASKQVDST Trigger: AGTGCTGTCCACTTGCTTGCTTGCTTGTGGCTCGCTCAGATCCAAGACAACTTGCCCAAGGGCAGCACCAACCACAGTGATCAGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CAA 90 bp | TGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCCGTGGCTGTaGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: CLARSLCSTAESPWL*NPYLVCLQLSPEGL Trigger: TAAACCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACGGGCCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGAGACAGTGGGATTTATaGTCTCCTCAGGTGATTAGA | + |
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Preference number: 2 (lower is better) Translates to: EWRLRASESGQRLGPQEGRQWDL*SPQVIR Trigger: TCTAATCACCTGAGGAGATCATAAATCCCACTGTCT...CCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGACACGTTAACCACCAGGTAGTCGGCCAAGGGGCCCAGGATGCGAACACCCATACCTGGTGTGTCTaGAACTGTCTCCAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TGHVNHQVVGQGAQDANTHTWCV*NCLQKV Trigger: AACCTTCTGGAGACAGTTGCAGACACACCAGGTATG...GGTGTTCGCATCCTGGGCCCCTTGGCCGACTACCTGGTGGTTAACGTGTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCACATGCTGCAGTATCTGCTTCTGCTGTCTaGCCCGTAGCCTGTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLRGFSQLLGVVAHAAVSASAV*PVACVP Trigger: TGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGA...TACTGCAGCATGTGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR CAA 90 bp | AGTGTGTTTGAGAAGCGTGCCAAGGCACTCATGGGGAAAGCCGTGTaGACATTGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVFEKRAKALMGKAV*TLSLRGFSQLLGVV Trigger: CACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAATGTCAACACGGCTTTCCCCATGAGTGCCTTGGCACGCTTCTCAAACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTCCCAGAGGCAGCCCATCTGTGGTGAGCTGGGTCTGCTTCTGCTGTCTTCAAGGGACATGCTTTaGGACAGCTCTCCCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VYSQRQPICGELGLLLLSSRDML*DSSPSQ Trigger: CTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGA...AGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCCTCTGGGAATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCTGACTCTCTTCAAGTGTGACTTGGGAGCCTGGACGAGGGTGTCCACTCTGTGGATGCTTCTGTaGACTGGGGACATTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SQLTLFKCDLGAWTRVSTLWMLL*TGDILQ Trigger: TTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAG...AGTGGACACCCTCGTCCAGGCTCCCAAGTCACACTTGAAGAGAGTCAGCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTGGCAGACAGCCAGACTCACAGGAGGCAACATCGCCATCTGACAACAGCAACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTG | + |
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Preference number: 2 (lower is better) Translates to: LLADSQTHRRQHRHLTTATAESP*LLNPYL Trigger: CAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGT...TGCTGTTGTCAGATGGCGATGTTGCCTCCTGTGAGTCTGGCTGTCTGCCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGGCAGCCCATCTGTGGTaGGCTGGGTCTGCTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEAAHLW*AGSASA Trigger: AGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGC...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCTGCGTACATCTTACTGGCAGACAGCCAGACTCACAGGAGGCAACATCGACCCTCTACATAGTCTaGAGCAGCATCCACCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TGCVHLTGRQPDSQEATSTLYIV*SSIHRS Trigger: ACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGT...CGATGTTGCCTCCTGTGAGTCTGGCTGTCTGCCAGTAAGATGTACGCAGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCATCAGGTGTGAAGAGTTCAGCCTTCTCTAACCAAGTCAGAAGGCTGGGTGGGATAAAAGCCACTTaGCAAACAGTGACCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: APSGVKSSAFSNQVRRLGGIKAT*QTVTPG Trigger: ACCAGGGGTCACTGTTTGTCAAGTGGCTTTTATCCC...ACCCAGCCTTCTGACTTGGTTAGAGAAGGCTGAACTCTTCACACCTGATGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGTCAAGGGACATGCTTTaGGACAGCTCTCCCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRSQCLYDPEPSQDSDLESRDML*DSSPSQ Trigger: CTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGA...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTTGGTAGGCGCCTTTTaGGTGGGGCTTCAGGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILVGAF*VGLQAG Trigger: ACCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTACATAGTCTGCAGCAGCATCCACCGAAGTCTTATTCTTCCCCAGGTTTATCCATCTGTGGTGAGCTaGGTCTGCTTCTGCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LYIVCSSIHRSLILPQVYPSVVS*VCFCCL Trigger: CAGACAGCAGAAGCAGACCCAGCTCACCACAGATGG...ATAAACCTGGGGAAGAATAAGACTTCGGTGGATGCTGCTGCAGACTATGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR-3UTR TCA 90 bp | AGACACACATCCCTGCAACTTTTGAGTACATTTGAAATAGTCTCAAAGTCAGAACCTGTGTTCCACCGCTaGGAGCCCGTGGCTGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RHTSLQLLSTFEIVSKSEPVFHR*EPVAVE Trigger: TTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGG...TTCTGACTTTGAGACTATTTCAAATGTACTCAAAAGTTGCAGGGATGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGAAATGTAAAATAAGCCAAGGTCAGCTGAAAGGTAGAGTCCTGGGGAGCACAGTTCAAGGGACATaGTTTGAGACAGCTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQKCKISQGQLKGRVLGSTVQGT*FETALP Trigger: AGGGAGAGCTGTCTCAAAGCATGTCCCTTGAACTGT...GCTCCCCAGGACTCTACCTTTCAGCTGACCTTGGCTTATTTTACATTTCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGAGACAGTGGGATTTATaGTCTCCTCAGGTGATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PRSQCLYDPEPSQDSDLERQWDL*SPQVIR Trigger: TCTAATCACCTGAGGAGATCATAAATCCCACTGTCT...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTACAGTTCAAGGGACATaGTTTGAGACAGCTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RSQCLYDPEPSQDSDLEITVQGT*FETALP Trigger: AGGGAGAGCTGTCTCAAAGCATGTCCCTTGAACTGT...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR CCA 72 bp | GGCCTCCAGCTCACGCTTGACCCTGGCCACGACTGGTaGCCCCAAGAAGGTGAGGGCCGTGTACAGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLQLTLDPGHDW*PQEGEGRVQLH Trigger: GTGCAGCTGTACACGGCCCTCACCTTCTTGGGGCCACCAGTCGTGGCCAGGGTCAAGCGTGAGCTGGAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | GGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCTaGCTTCTGAGGTCCCTTCAAGGCGTCCCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GREVRGNLHQHR*LLRSLQGVPLL Trigger: CAGGAGAGGGACGCCTTGAAGGGACCTCAGAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCGTTGGTAGGCGCCTTTaGGGTGGGGCTTCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVESWGAPYRPRVEAQGFVGRRL*GGASGW Trigger: CCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAAC...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCCCATCTGTGGTGAGCTGGGTCTGCTTCTGCTGTCTGGCCCGTAGCCTGGAGAGCCCGTGGCTGTaGAATCCATACCTGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSPSVVSWVCFCCLARSLESPWL*NPYLVC Trigger: ACACACCAGGTATGGATTCAACAGCCACGGGCTCTC...CAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR GCA 72 bp | ATTCCCAGAGGCAGCCCATCTGTGGTGAGCTGGGTCTaGTTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: IPRGSPSVVSWV*FCCLARSLCST Trigger: GGTGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCCTCTGGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR GCA 72 bp | CAAGCAAGTGGACAGCACTCCTCCATGGATGGCCTCTaGATCAACCCCTGTCCTGCTCGAGACCCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QASGQHSSMDGL*INPCPARDPAL Trigger: CAGGGCAGGGTCTCGAGCAGGACAGGGGTTGATGCAGAGGCCATCCATGGAGGAGTGCTGTCCACTTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | CCACTCAGTCCCCCTGTCTCAGAGCGCAGAGCACCCTaGAGGCCAACAGGGCGACTCACTGTGGTATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSPPVSERRAP*RPTGRLTVVFV Trigger: CACAAATACCACAGTGAGTCGCCCTGTTGGCCTCCAGGGTGCTCTGCGCTCTGAGACAGGGGGACTGAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | GTGCCTTGGGTGAGGGCGTACATCTCCCGGATCGTCTaGGTCGACAGATCTCGGAGTGGCTTCCCACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VPWVRAYISRIV*VDRSRSGFPLS Trigger: ACTGAGTGGGAAGCCACTCCGAGATCTGTCGACCCAGACGATCCGGGAGATGTACGCCCTCACCCAAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | GACACAGTGAGTCAGCTGGGGACCTCCTGCCCCAGCTaGGTGAGCCCTTCAGGTGTACCCATTAACGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DTVSQLGTSCPS*VSPSGVPINAL Trigger: AAGGGCGTTAATGGGTACACCTGAAGGGCTCACCCAGCTGGGGCAGGAGGTCCCCAGCTGACTCACTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCATCAGGTGTGAAGAGTTCAGCCTTCTCTAACCAAGTCAGAAGGCTGGGTCTCTCCTGCAGCACCTaGGACAGCAGGCGGCGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: APSGVKSSAFSNQVRRLGLSCST*DSRRRS Trigger: GCTGCGCCGCCTGCTGTCCAAGGTGCTGCAGGAGAG...ACCCAGCCTTCTGACTTGGTTAGAGAAGGCTGAACTCTTCACACCTGATGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | CTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTGGTGTGTCTGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LARSLCSTAESP*LLNPYLVCLQL Trigger: CAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACGGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGTTCAAGGGACATGCTTaGAGACAGCTCTCCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEPPTDQEWRLRASESGQFKGHA*RQLSLS Trigger: TGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGAA...CTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTTCAGCCTTCTCTAACCAAGTCAGAAGGCTGGGTGGAAGGCCCAGAGCTGTTGGTAGGCGCCTTTaGGGTGGGGCTTCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSAFSNQVRRLGGRPRAVGRRL*GGASGW Trigger: CCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAAC...AGCTCTGGGCCTTCCACCCAGCCTTCTGACTTGGTTAGAGAAGGCTGAACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR TCA 72 bp | GCAGTCCATCGAGGCCACAGTTCAAGGGACATGCTTTaGGACAGCTCTCCCTCTCAGGACTCAGTCACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AVHRGHSSRDML*DSSPSQDSVTQ Trigger: CTGCGTGACTGAGTCCTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGAACTGTGGCCTCGATGGACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR TCA 72 bp | GTAGCCTGTGTTCCACCGCTGAGAGCCCGTGGCTGTTaGATCCATACCTGGTGTGTCTGCAACTGTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VACVPPLRARGC*IHTWCVCNCLQ Trigger: CTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR TCA 72 bp | TGGTTGGTGCTGCCCTTGGGCAAGTTGTCTTGGATCTaGGCGAGCCACAAGCAAGCAAGCAAGTGGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLVLPLGKLSWI*ASHKQASKWTA Trigger: TGCTGTCCACTTGCTTGCTTGCTTGTGGCTCGCTCAGATCCAAGACAACTTGCCCAAGGGCAGCACCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGGTTGGTAGGCGCCTTTaGGGTGGGGCTTCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEVGRRL*GGASGW Trigger: CCAGCCTGAAGCCCCACCCAAAAGGCGCCTACCAAC...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR TCA 72 bp | CAGACAGCCAGACTCACAGGAGGCAACATCGCCATCTaGCAACAGCAAAGGCACTACAGACCATCCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QTARLTGGNIAI*QQQRHYRPSCH Trigger: GTGACAGGATGGTCTGTAGTGCCTTTGCTGTTGTCAGATGGCGATGTTGCCTCCTGTGAGTCTGGCTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR GCA 72 bp | CTTGTGCAGTCCATCGAGGCCACAGTTCAAGGGACATaGTTTGAGACAGCTCTCCCTCTCAGGACTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVQSIEATVQGT*FETALPLRTQS Trigger: TGACTGAGTCCTGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGAACTGTGGCCTCGATGGACTGCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGCTGGCTCAGTGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRAGSVVKSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCAGCTCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR TCA 72 bp | AGCCAAAGCAGTCCTGATGGAGGAACTGAGCTGCAGTaGCCTGAAGTAACTCTTCCCAGGCCAGCTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: SQSSPDGGTELQ*PEVTLPRPAQC Trigger: ACATTGAGCTGGCCTGGGAAGAGTTACTTCAGGTCACTGCAGCTCAGTTCCTCCATCAGGACTGCTTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | CTGGCACGTTCTCCTGTTCAGGTCTTCACAGGCAACTaGACAAAGAAGTACTGGGCACAGAACCCATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LARSPVQVFTGN*TKKYWAQNPSQ Trigger: CTGAGATGGGTTCTGTGCCCAGTACTTCTTTGTCCAGTTGCCTGTGAAGACCTGAACAGGAGAACGTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGACATCCCTGCAACTTTaGAGTACATTTGAAATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVEAQGFRIRAETRPPRRTSLQL*STFEIV Trigger: GACTATTTCAAATGTACTCAAAAGTTGCAGGGATGT...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR GCA 72 bp | ACAGACTACCCACAGCACAGTGGACACATCTGTGGATaGTTCTGTGCACTGGGGACATTCTGCAAATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDYPQHSGHICG*FCALGTFCKWR Trigger: TCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | AAGCACAGACTACCCACAGCACAGTGGACACATCTGTaGATGCTTCTGTGCACTGGGGACATTCTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: KHRLPTAQWTHL*MLLCTGDILQM Trigger: CATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGGTAGTCTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR GCA 72 bp | CCCACAGCACAGTGGACACATCTGTGGATGCTTCTGTaGACTGGGGACATTCTGCAAATGGAGATCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTAQWTHLWMLL*TGDILQMEIIS Trigger: AGAAATGATCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | ACTGGGCACAGAACCCATCTCAGAAGCAGATTACCATaGAGATCAATGGCTGAGCCAGCTGACTCTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TGHRTHLRSRLP*RSMAEPADSLQ Trigger: TTGAAGAGAGTCAGCTGGCTCAGCCATTGATCTCCATGGTAATCTGCTTCTGAGATGGGTTCTGTGCCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | AGCACAGTGGACACATCTGTGGATGCTTCTGTGCACTaGGGACATTCTGCAAATGGAGATCATTTCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: STVDTSVDASVH*GHSANGDHFCR Trigger: TCTGCAGAAATGATCTCCATTTGCAGAATGTCCCCAGTGCACAGAAGCATCCACAGATGTGTCCACTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTTCAAGGGACATGCTTaGAGACAGCTCTCCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIFKGHA*RQLSLS Trigger: TGAGAGGGAGAGCTGTCTCAAAGCATGTCCCTTGAA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACACACATCCCTGCAACTTTTGAGTACATTTGAAATAGTCTCAAAGTCAGAACTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHTSLQLLSTFEIVSKSELAMSS*SWAVRS Trigger: TGACCTCACGGCCCAGGACAAGGAGGACATTGCCAG...TTCTGACTTTGAGACTATTTCAAATGTACTCAAAAGTTGCAGGGATGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CCA 72 bp | AGTGATCTTAGCTCCACCAGCTCATATTGTACAATGTaGAGATGCCCCATCAGGTGTGAAGAGTTCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SDLSSTSSYCTM*RCPIRCEEFSL Trigger: AAGGCTGAACTCTTCACACCTGATGGGGCATCTCCACATTGTACAATATGAGCTGGTGGAGCTAAGATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATAGGATCTaGTGCCTTCATCTGGTGTGTCTGAAGATAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTICNRI*CLHLVCLKIAS Trigger: TGAAGCTATCTTCAGACACACCAGATGAAGGCATCAGATCCTATTACAGATGGTTGTGAGCCACCATGTGGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGAGCGCAGAGCACCCTaGAGGCCAACAGGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVEAQGFRIRAETRPPRRERRAP*RPTGRL Trigger: GAGTCGCCCTGTTGGCCTCCAGGGTGCTCTGCGCTC...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGCCTGGCCACGACTGGTaGCCCCAAGAAGGTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVEAQGFRIRAETRPPRRPGHDW*PQEGEG Trigger: GCCCTCACCTTCTTGGGGCCACCAGTCGTGGCCAGG...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTGGGTCTGCTTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGCAGGAAGGCCCACCATaGACGTGGGCACCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VSWVCFCCLARSLCSTAEQEGPP*TWAPPS Trigger: GGATGGTGGTGCCCACGTTCATGGTGGGCCTTCCTG...CTCAGCGGTGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCTTCCCACTCAGTCCCCCTGTCTCAGAGCGCAGAGCACCCTGGAGGCCGGAATACTCGGGGCCTaGGGTTTCCTTCCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EWLPTQSPCLRAQSTLEAGILGA*GFLPEA Trigger: AGCCTCAGGAAGGAAACCCCAGGCCCCGAGTATTCC...GGCCTCCAGGGTGCTCTGCGCTCTGAGACAGGGGGACTGAGTGGGAAGCCACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCTGAAAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCGTGGCCCCAAGAAGGTaGGGGCCGTGTACAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLKGRVLGSPLQTKSGGVAPRR*GPCTAA Trigger: TGCAGCTGTACACGGCCCTCACCTTCTTGGGGCCAC...GCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTTTCAGCTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGAAGGCGTCCCTCTCCTaGAGCACCTTGGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVEAQGFRIRAETRPPRRKASLS*STLDSR Trigger: CCTGCTGTCCAAGGTGCTGCAGGAGAGGGACGCCTT...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGATCCGGTGCGCCGACTCTaGATCAAGCAGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEAQGFRIRAETRPPRRDPVRRL*IKQSLQ Trigger: CTGCAGAGACTGCTTGATCCAGAGTCGGCGCACCGG...ATCCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGATAGGGAGGCCCCTGCCTaGATCTTCTCCAAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VEAQGFRIRAETRPPRRDREAPA*IFSKAS Trigger: GGATGCCTTGGAGAAGATCCAGGCAGGGGCCTCCCT...ATCCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| 3UTR CAA 72 bp | ATGCCCAGCTCTCTGGCCACGCTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCAGGGGCAATCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: MPSSLATLAMSS*SWAVRSGAIFT Trigger: GGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGCTGGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCCGTGGCTGTTGCTGGGGTTTCCTTCCTaGGGCTGGGGAGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: FCCLARSLCSTAESPWLLLGFPS*GWGVTL Trigger: AAGTGTGACTCCCCAGCCTCAGGAAGGAAACCCCAG...CAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACGGGCCAGACAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGGCATCCTGTCCGCTaGTCACACCACCAACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KVESWGAPYRPRVEAQGFRHPVR*SHHQPR Trigger: TCGGGGTTGGTGGTGTGAGCAGCGGACAGGATGCCT...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGGAATACTCGGGGCCTaGGGTTTCCTTCCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVEAQGFRIRAETRPPRRGILGA*GFLPEA Trigger: AGCCTCAGGAAGGAAACCCCAGGCCCCGAGTATTCC...CCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGTCTGCTTCTGCTGTCTaGCCCGTAGCCTGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEPPTDQEWRLRASESGQSASAV*PVACVP Trigger: TGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGA...CTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGCCATCTGTGGTGAGCTaGGTCTGCTTCTGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEPPTDQEWRLRASESGQPSVVS*VCFCCL Trigger: CAGACAGCAGAAGCAGACCCAGCTCACCACAGATGG...CTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGTCCACAGCTTCCCCGTaGTTGTCAAATCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWRLRASESGQRLGPQEGSTASP*LSNPAA Trigger: TGCTGCAGGATTTGACAAGCACGGGGAAGCTGTGGA...CCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCAGAGGCAGCCCATCTGTGGTGAGCTGGGTCTGCTTCTGCTGTCTGGCCGGAATACTCGGGGCCTaGGGTTTCCTTCCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPRGSPSVVSWVCFCCLAGILGA*GFLPEA Trigger: AGCCTCAGGAAGGAAACCCCAGGCCCCGAGTATTCC...GGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCCTCTGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGATGCGAACACCCTCTACATAGTCTGCAGCAGCATCCACCGAAGTCTCCGGTGCGCCGACTCTaGATCAAGCAGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGCEHPLHSLQQHPPKSPVRRL*IKQSLQ Trigger: CTGCAGAGACTGCTTGATCCAGAGTCGGCGCACCGG...AGACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGTGTTCGCATCCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTGCAGCAGCATCCACCGAAGTCTTATTCTTCCCCAGGTTTATTCCCAGAGCTCCACCCCCAAGGATaGTGGCTGCATCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQQHPPKSYSSPGLFPELHPQG*WLHPGP Trigger: GGGCCCTGGATGCAGCCATCATCCTTGGGGGTGGAG...CTCTGGGAATAAACCTGGGGAAGAATAAGACTTCGGTGGATGCTGCTGCAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GEPPTDQEWRLRASESGQVLVKS*SNPYWI Trigger: AATCCAGTAGGGATTGCTGCAGGATTTGACAAGCAC...CTGCCCGGATTCTGAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCACCCTCTACATAGTCTaGAGCAGCATCCACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVESWGAPYRPRVEAQGFTLYIV*SSIHRS Trigger: ACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGT...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EWRLRASESGQRLGPQEGLLITA*SSGRRN Trigger: ATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAG...CCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR CAA 72 bp | CGTAGCCTGTGTTCCACCGCTGAGAGCCCGTGGCTGTaGAATCCATACCTGGTGTGTCTGCAACTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSLCSTAESPWL*NPYLVCLQLSP Trigger: TGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| 3UTR CAA 72 bp | CGTGCCAAGGCACTCATGGGGAAAGCCGTGTTGACATaGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAKALMGKAVLT*SLRGFSQLLGV Trigger: CACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAATGTCAACACGGCTTTCCCCATGAGTGCCTTGGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACAGTGACCCCTGGTGGATCAGAATGAAAGACACACATCCCTGCAACTTTAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSDPWWIRMKDTHPCNFRAVYS*TREAPA Trigger: GGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCT...AAAGTTGCAGGGATGTGTGTCTTTCATTCTGATCCACCAGGGGTCACTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCCATCTGTGGTGAGCTGGGTCTGCTTCTGCTGTCTGGCCCGTAGCCTGGAAACACATGTATGTTaGCTGACCATTCCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVSWVCFCCLARSLETHVC*LTIPKD Trigger: GTCTTTGGGAATGGTCAGGCAACATACATGTGTTTC...CAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCGGATTTCGGAATTTATaGCCCAGGACTCTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVESWGAPYRPRVEAQGFGFRNL*PRTLTS Trigger: GGAAGTGAGAGTCCTGGGCCATAAATTCCGAAATCC...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR CAA 72 bp | AAGGCACTCATGGGGAAAGCCGTGTTGACATTGTCTTaGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KALMGKAVLTLS*RGFSQLLGVVA Trigger: TGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAATGTCAACACGGCTTTCCCCATGAGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGTGACCCCTGGTGGATCAGAATGAAAGACACACATCCCTGCAACTTTCTCCACCCCCAAGGATaGTGGCTGCATCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSDPWWIRMKDTHPCNFLHPQG*WLHPGP Trigger: GGGCCCTGGATGCAGCCATCATCCTTGGGGGTGGAG...AAAGTTGCAGGGATGTGTGTCTTTCATTCTGATCCACCAGGGGTCACTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGAGCACCGCTGGCTTCTaGGGTCCCTTCAAGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLESTAGF*GPFKAS Trigger: GGACGCCTTGAAGGGACCTCAGAAGCCAGCGGTGCT...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KVESWGAPYRPRVEAQGFVLVKS*SNPYWI Trigger: AATCCAGTAGGGATTGCTGCAGGATTTGACAAGCAC...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
||
| 3UTR CAA 72 bp | GAGAAGCGTGCCAAGGCACTCATGGGGAAAGCCGTGTaGACATTGTCTTTGAGAGGCTTCAGCCAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKRAKALMGKAV*TLSLRGFSQLL Trigger: CAGCAACTGGCTGAAGCCTCTCAAAGACAATGTCAACACGGCTTTCCCCATGAGTGCCTTGGCACGCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| 3UTR CAA 72 bp | ATCACTGTGGTTGGTGCTGCCCTTGGGCAAGTTGTCTaGGATCTGAGCGAGCCACAAGCAAGCAAGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITVVGAALGQVV*DLSEPQASKQV Trigger: CACTTGCTTGCTTGCTTGTGGCTCGCTCAGATCCAAGACAACTTGCCCAAGGGCAGCACCAACCACAGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTCCACCCCCAAGGATaGTGGCTGCATCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILHPQG*WLHPGP Trigger: GGGCCCTGGATGCAGCCATCATCCTTGGGGGTGGAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGCCTGTGTTCCACCGCTaGGAGCCCGTGGCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEPVFHR*EPVAVE Trigger: TTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGG...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGGATGCGAACACCCTCTACATAGTCTGCAGCAGCATCCACCGAAGTCTCACATGTATGTTGCCTaGCCATTCCCAAAGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: GPGCEHPLHSLQQHPPKSHMYVA*PFPKTS Trigger: CGATGTCTTTGGGAATGGTCAGGCAACATACATGTG...AGACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGTGTTCGCATCCTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGCCGGTGCGCCGACTCTaGATCAAGCAGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEPVRRL*IKQSLQ Trigger: CTGCAGAGACTGCTTGATCCAGAGTCGGCGCACCGG...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGTGACCCCTGGTGGATCAGAATGAAAGACACACATCCCTGCAACTTTGACCCTGGCCACGACTaGTGGCCCCAAGAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSDPWWIRMKDTHPCNFDPGHD*WPQEGE Trigger: CTCACCTTCTTGGGGCCACCAGTCGTGGCCAGGGTC...AAAGTTGCAGGGATGTGTGTCTTTCATTCTGATCCACCAGGGGTCACTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGCTGGGGTTTCCTTCCTaGGGCTGGGGAGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLELGFPS*GWGVTL Trigger: AAGTGTGACTCCCCAGCCTCAGGAAGGAAACCCCAG...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCGTGGCTGTTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGGGATTTCGGAATTTATaGCCCAGGACTCTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPVAVESIPGVSATVSRRGFRNL*PRTLTS Trigger: GGAAGTGAGAGTCCTGGGCCATAAATTCCGAAATCC...CCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGATGCGAACACCCTCTACATAGTCTGCAGCAGCATCCACCGAAGTCTTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGCEHPLHSLQQHPPKSCSNPY*ISEFMA Trigger: GGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCA...AGACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGTGTTCGCATCCTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGGGAATACTCGGGGCCTaGGGTTTCCTTCCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEGILGA*GFLPEA Trigger: AGCCTCAGGAAGGAAACCCCAGGCCCCGAGTATTCC...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTCTCCTGCAGCACCTTaGACAGCAGGCGGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEISPAAP*TAGGAA Trigger: AGCTGCGCCGCCTGCTGTCCAAGGTGCTGCAGGAGA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGTGACCCCTGGTGGATCAGAATGAAAGACACACATCCCTGCAACTTTCGATGCCCAGCTCTCTaGCCACGCTGGCAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNSDPWWIRMKDTHPCNFRCPAL*PRWQCP Trigger: AGGACATTGCCAGCGTGGCCAGAGAGCTGGGCATCG...AAAGTTGCAGGGATGTGTGTCTTTCATTCTGATCCACCAGGGGTCACTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAAATGTAAAATAAGCCAAGGTCAGCTGAAAGGTAGAGTCCTGGGGAGCCGACAGATCTCGGAGTaGCTTCCCACTCAGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQKCKISQGQLKGRVLGSRQISE*LPTQSP Trigger: GGGGGACTGAGTGGGAAGCCACTCCGAGATCTGTCG...GCTCCCCAGGACTCTACCTTTCAGCTGACCTTGGCTTATTTTACATTTCTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGCTGTCAGGTAAGAGGTaGAGAGAAGTCCTCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLELSGKR*REVLHP Trigger: GGGGTGGAGGACTTCTCTTCACCTCTTACCTGACAG...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCCTGTGTTCCACCGCTaGGAGCCCGTGGCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIPVFHR*EPVAVE Trigger: TTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTGTGGTGAGCTGGGTCTaGTTCTGCTGTCTGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIVVSWV*FCCLAR Trigger: ACGGGCCAGACAGCAGAAGCAGACCCAGCTCACCAC...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTAAGGCGTCCCTCTCCTaGAGCACCTTGGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIKASLS*STLDSR Trigger: CCTGCTGTCCAAGGTGCTGCAGGAGAGGGACGCCTT...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLETAESP*LLNPYL Trigger: CAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGT...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTGGGGTTTCCTTCCTaGGGCTGGGGAGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILGFPS*GWGVTL Trigger: AAGTGTGACTCCCCAGCCTCAGGAAGGAAACCCCAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | TTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGTTTAATGATGCAGCTGGGGTTTCCTTCCTaGGGCTGGGGAGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LNPYLVCLQLSPEGLMMQLGFPS*GWGVTL Trigger: AAGTGTGACTCCCCAGCCTCAGGAAGGAAACCCCAG...CTGCATCATTAAACCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTACCCCGTTCTCTCTCTaGCCACGCTGGCAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEITPFSL*PRWQCP Trigger: AGGACATTGCCAGCGTGGCCAGAGAGAGAACGGGGT...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143900.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTGTCAGGTAAGAGGTaGAGAGAAGTCCTCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILSGKR*REVLHP Trigger: GGGGTGGAGGACTTCTCTTCACCTCTTACCTGACAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
||
| CDS-3UTR GCA 90 bp | CCCGTGGCTGTTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGTTTGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PVAVESIPGVSATVSRRFVLVKS*SNPYWI Trigger: AATCCAGTAGGGATTGCTGCAGGATTTGACAAGCAC...AAACCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS-3UTR CCA 90 bp | CCCGTGGCTGTTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGTTTTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVAVESIPGVSATVSRRFCSNPY*ISEFMA Trigger: GGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCA...AAACCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAACAGCCACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEITAESP*LLNPYL Trigger: CAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGT...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTCTGCTTCTGCTGTCTaGCCCGTAGCCTGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEISASAV*PVACVP Trigger: TGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCCATCTGTGGTGAGCTaGGTCTGCTTCTGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIPSVVS*VCFCCL Trigger: CAGACAGCAGAAGCAGACCCAGCTCACCACAGATGG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTCTCTCTGGCCACGCTaGCAATGTCCTCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEISLWPR*QCPPCP Trigger: AGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143900.8 |
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| CDS-3UTR TCA 90 bp | AGACACACATCCCTGCAACTTTTGAGTACATTTGAAATAGTCTCAAAGTCAGAAAGCACCGCTGGCTTCTaGGGTCCCTTCAAGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTSLQLLSTFEIVSKSESTAGF*GPFKAS Trigger: GGACGCCTTGAAGGGACCTCAGAAGCCAGCGGTGCT...TTCTGACTTTGAGACTATTTCAAATGTACTCAAAAGTTGCAGGGATGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS-3UTR GCA 90 bp | AGACACACATCCCTGCAACTTTTGAGTACATTTGAAATAGTCTCAAAGTCAGAACACCAGGGAGGCCCCTaGCTGGATCTTCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHTSLQLLSTFEIVSKSEHQGGP*LDLLQG Trigger: GCCTTGGAGAAGATCCAGGCAGGGGCCTCCCTGGTG...TTCTGACTTTGAGACTATTTCAAATGTACTCAAAAGTTGCAGGGATGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTACCCTCTACATAGTCTaGAGCAGCATCCACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEITLYIV*SSIHRS Trigger: ACTTCGGTGGATGCTGCTGCAGACTATGTAGAGGGT...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCLYDPEPSQDSDLECSNPY*ISEFMA Trigger: GGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCA...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAGTGACCCCTGGTGGATCAGAATGAAAGACACACATCCCTGCAACTTTCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSDPWWIRMKDTHPCNFLLITA*SSGRRN Trigger: ATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAG...AAAGTTGCAGGGATGTGTGTCTTTCATTCTGATCCACCAGGGGTCACTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| CDS-3UTR CCA 90 bp | AGACACACATCCCTGCAACTTTTGAGTACATTTGAAATAGTCTCAAAGTCAGAAGCTCTCTGGCCACGCTaGCAATGTCCTCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTSLQLLSTFEIVSKSEALWPR*QCPPCP Trigger: AGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGC...TTCTGACTTTGAGACTATTTCAAATGTACTCAAAAGTTGCAGGGATGTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIVLVKS*SNPYWI Trigger: AATCCAGTAGGGATTGCTGCAGGATTTGACAAGCAC...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEICSNPY*ISEFMA Trigger: GGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCA...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILLITA*SSGRRN Trigger: ATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| CDS-3UTR CCA 90 bp | TTGAATCCATACCTGGTGTGTCTGCAACTGTCTCCAGAAGGTTTAATGATGCAGCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNPYLVCLQLSPEGLMMQLLITA*SSGRRN Trigger: ATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAG...CTGCATCATTAAACCTTCTGGAGACAGTTGCAGACACACCAGGTATGGATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| 3UTR CAA 72 bp | TGTTTATTTGCAGAGAAAGAAAGGGATAAAAGCCACTaGACAAACAGTGACCCCTGGTGGATCAGAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLFAEKERDKSH*TNSDPWWIRMK Trigger: TTTCATTCTGATCCACCAGGGGTCACTGTTTGTCAAGTGGCTTTTATCCCTTTCTTTCTCTGCAAATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| CDS-3UTR CAA 90 bp | GAGTGGAGGCTCAGGGCTTCAGAATCCGGGCAGAGACTCGGCCCCCAAGAAGGGCTCTCCTGCAGCACCTaGGACAGCAGGCGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EWRLRASESGQRLGPQEGLSCST*DSRRRS Trigger: GCTGCGCCGCCTGCTGTCCAAGGTGCTGCAGGAGAG...CCCTTCTTGGGGGCCGAGTCTCTGCCCGGATTCTGAAGCCCTGAGCCTCCACTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS CCA 90 bp | AACCCCGTTCTCTCTCTGGCCACGCTGGCAATGTCCTCCTTGTCCTaGGCCGTGAGGTCAGGGGCAATCTTCACCAGCACCGCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPVLSLATLAMSSLS*AVRSGAIFTSTAGF Trigger: GAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGAGAACGGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143900.8 |
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| CDS TCA 90 bp | TTCTCTCTCTGGCCACGCTGGCAATGTCCTCCTTGTCCTGGGCCGTaGGGTCAGGGGCAATCTTCACCAGCACCGCTGGCTTCTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLWPRWQCPPCPGP*GQGQSSPAPLASEV Trigger: GACCTCAGAAGCCAGCGGTGCTGGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143900.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGTCTGCTTCTGCTGTCTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCACAGCTTCCCCGTGCTaGTCAAATCCTGCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: AGSASAVWPVACVPPLRATASPC*SNPAAI Trigger: GATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGT...GGCTCTCAGCGGTGGAACACAGGCTACGGGCCAGACAGCAGAAGCAGACCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133353.8 ENSMUST00000150804.3 |
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| CDS CCA 90 bp | CACCACCATCCCACGGGCTCACGTCCCAAACTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGGTTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HHHPTGSRPKLLITA*SSGRRNTRGLGFPS Trigger: GGAAGGAAACCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGTTTGGGACGTGAGCCCGTGGGATGGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| CDS-3UTR CAA 90 bp | GGTCAGCTGAAAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCACAGCTTCCCCGTGCTaGTCAAATCCTGCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GQLKGRVLGSPLQTKSGGTASPC*SNPAAI Trigger: GATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGT...GCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTTTCAGCTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 |
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| CDS CCA 90 bp | CTGACCATTCCCAAAGACATCGGTCCCTGCCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGGTTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTIPKDIGPCLLITA*SSGRRNTRGLGFPS Trigger: GGAAGGAAACCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGGAATGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| CDS-3UTR CAA 90 bp | GGTCAGCTGAAAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCGAGAGCCCGTGGCTGTaGAATCCATACCTGTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: GQLKGRVLGSPLQTKSGGESPWL*NPYLLI Trigger: TATTAACAGGTATGGATTCAACAGCCACGGGCTCTC...GCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTTTCAGCTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS-3UTR CAA 90 bp | AAGGTAGAGTCCTGGGGAGCCCCCTACAGACCAAGAGTGGAGGCTCAGGGCTTCACTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KVESWGAPYRPRVEAQGFTVNNS*VLRETE Trigger: TTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGT...GAAGCCCTGAGCCTCCACTCTTGGTCTGTAGGGGGCTCCCCAGGACTCTACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGAGGCAGCCCATCTGTGGTGAGCTGGGTCTGCTTCTGCTGTCTGGCCCGAGAAACACATGTATGTaGCCTGACCATTCCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQRQPICGELGLLLLSGPRNTCM*PDHSQR Trigger: TCTTTGGGAATGGTCAGGCAACATACATGTGTTTCT...CGGGCCAGACAGCAGAAGCAGACCCAGCTCACCACAGATGGGCTGCCTCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| CDS-3UTR CAA 90 bp | TTGTCTTTGAGAGGCTTCAGCCAGTTGCTGGGCGTGGTGGCACATGCTGCAGTAACAGCTTCCCCGTGCTaGTCAAATCCTGCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSLRGFSQLLGVVAHAAVTASPC*SNPAAI Trigger: GATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGT...TACTGCAGCATGTGCCACCACGCCCAGCAACTGGCTGAAGCCTCTCAAAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTCTCCTGCAGCACCTaGGACAGCAGGCGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILSCST*DSRRRS Trigger: GCTGCGCCGCCTGCTGTCCAAGGTGCTGCAGGAGAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CAA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGCTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSQCLYDPEPSQDSDLELAMSS*SWAVRS Trigger: TGACCTCACGGCCCAGGACAAGGAGGACATTGCCAG...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTGCCTCCAGCTCACGCTaGACCCTGGCCACGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSQCLYDPEPSQDSDLEIASSSR*TLATTG Trigger: ACCAGTCGTGGCCAGGGTCAAGCGTGAGCTGGAGGC...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS GCA 90 bp | CAGCTTATAGAGTCCGTCCACAGCTTCCCCGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATTTCGGAATTTATGGCCCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLIESVHSFPVLVKS*SNPYWISEFMAQDS Trigger: AGAGTCCTGGGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGTGGACGGACTCTATAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000133353.8 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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| CDS CCA 90 bp | GTCCACAGCTTCCCCGTGCTTGTCAAATCCTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCCCAGGACTCTCACTTCCAGCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHSFPVLVKSCSNPY*ISEFMAQDSHFQHV Trigger: AACATGCTGGAAGTGAGAGTCCTGGGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000133353.8 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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| CDS-3UTR CAA 90 bp | AGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGATTCTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQCLYDPEPSQDSDLEILAMSS*SWAVRS Trigger: TGACCTCACGGCCCAGGACAAGGAGGACATTGCCAG...AATCTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS GCA 90 bp | GAAACACATGTATGTTGCCTGACCATTCCCAAAGACATCGGTCCCTaGCTGTTAATAACAGCTTGGTCCTCAGGGAGACGGAATACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETHVCCLTIPKDIGP*LLITAWSSGRRNTR Trigger: CCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGGAATGGTCAGGCAACATACATGTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| CDS-3UTR CAA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGACAGCTTCCCCGTGCTaGTCAAATCCTGCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PRSQCLYDPEPSQDSDLETASPC*SNPAAI Trigger: GATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGT...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123605.9 ENSMUST00000133353.8 ENSMUST00000143900.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGAAATGTAAAATAAGCCAAGGTCAGCTGAAAGGTAGAGTCCTGGGGAGCCCTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQKCKISQGQLKGRVLGSPVNNS*VLRETE Trigger: TTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGG...GCTCCCCAGGACTCTACCTTTCAGCTGACCTTGGCTTATTTTACATTTCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123605.9 |
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| CDS-3UTR CAA 90 bp | CCAAGAAGCCAATGTCTTTATGATCCTGAGCCATCCCAGGACTCAGATCTAGAGGAGAGCCCGTGGCTGTaGAATCCATACCTGTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PRSQCLYDPEPSQDSDLEESPWL*NPYLLI Trigger: TATTAACAGGTATGGATTCAACAGCCACGGGCTCTC...CTCTAGATCTGAGTCCTGGGATGGCTCAGGATCATAAAGACATTGGCTTCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS CAA 72 bp | CCCGTTCTCTCTCTGGCCACGCTGGCAATGTCCTCCTaGTCCTGGGCCGTGAGGTCAGGGGCAATCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVLSLATLAMSS*SWAVRSGAIFT Trigger: GGTGAAGATTGCCCCTGACCTCACGGCCCAGGACAAGGAGGACATTGCCAGCGTGGCCAGAGAGAGAACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143900.8 |
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| CDS CCA 72 bp | CCCACGGGCTCACGTCCCAAACTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTGSRPKLLITA*SSGRRNTRGLG Trigger: CCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGTTTGGGACGTGAGCCCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
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| CDS CAA 90 bp | GCACCACCATCCCACGGGCTCACGTCCCAAACTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGGTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: APPSHGLTSQTVNNS*VLRETEYSGPGVSF Trigger: GAAGGAAACCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGTTTGGGACGTGAGCCCGTGGGATGGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS TCA 72 bp | TGGCCCAGGACTCTCACTTCCAGCATGTTGGAGTCCTaGAACGTAGCTCGAGGAAGGAGCCCCAGGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: WPRTLTSSMLES*NVARGRSPREM Trigger: CATCTCCCTGGGGCTCCTTCCTCGAGCTACGTTTCAGGACTCCAACATGCTGGAAGTGAGAGTCCTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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| CDS CCA 72 bp | CCCAAAGACATCGGTCCCTGCCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKDIGPCLLITA*SSGRRNTRGLG Trigger: CCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS CAA 72 bp | TCCCACGGGCTCACGTCCCAAACTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAATACTCGGGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SHGLTSQTVNNS*VLRETEYSGPG Trigger: CCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGTTTGGGACGTGAGCCCGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133353.8 |
||
| CDS CAA 72 bp | TCCCAAAGACATCGGTCCCTGCCTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAATACTCGGGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQRHRSLPVNNS*VLRETEYSGPG Trigger: CCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS CAA 90 bp | CCTGACCATTCCCAAAGACATCGGTCCCTGCCTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGGTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PDHSQRHRSLPVNNS*VLRETEYSGPGVSF Trigger: GAAGGAAACCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGGAATGGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
||
| CDS CCA 72 bp | CCGTGGCTGTTGAATCCATACCTGTTAATAACAGCTTaGTCCTCAGGGAGACGGAATACTCGGGGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PWLLNPYLLITA*SSGRRNTRGLG Trigger: CCCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGTATGGATTCAACAGCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS CCA 72 bp | CTGGCCCGTAGCCTGTGTTCCACCGCTGAGAGCCCGTaGCTGTTGAATCCATACCTGTTAATAACAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LARSLCSTAESP*LLNPYLLITAW Trigger: CCAAGCTGTTATTAACAGGTATGGATTCAACAGCCACGGGCTCTCAGCGGTGGAACACAGGCTACGGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS CAA 72 bp | CCCGTGGCTGTTGAATCCATACCTGTTAATAACAGCTaGGTCCTCAGGGAGACGGAATACTCGGGGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PVAVESIPVNNS*VLRETEYSGPG Trigger: CCCAGGCCCCGAGTATTCCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGTATGGATTCAACAGCCACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123605.9 ENSMUST00000143900.8 |
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| CDS GCA 72 bp | GAGTCCGTCCACAGCTTCCCCGTGCTTGTCAAATCCTaGAGCAATCCCTACTGGATTTCGGAATTTATGGCC | + |
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Preference number: 6 (lower is better) Translates to: ESVHSFPVLVKS*SNPYWISEFMA Trigger: GGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCAGGATTTGACAAGCACGGGGAAGCTGTGGACGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000133353.8 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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| CDS GCA 72 bp | GTATGTTGCCTGACCATTCCCAAAGACATCGGTCCCTaGCTGTTAATAACAGCTTGGTCCTCAGGGAGACGG | + |
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Preference number: 6 (lower is better) Translates to: VCCLTIPKDIGP*LLITAWSSGRR Trigger: CCGTCTCCCTGAGGACCAAGCTGTTATTAACAGGCAGGGACCGATGTCTTTGGGAATGGTCAGGCAACATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150804.3 |
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| CDS CCA 72 bp | AATCCTGCAGCAATCCCTACTGGATTTCGGAATTTATaGCCCAGGACTCTCACTTCCAGCATGTTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NPAAIPTGFRNL*PRTLTSSMLES Trigger: GGACTCCAACATGCTGGAAGTGAGAGTCCTGGGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000133353.8 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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| CDS CCA 72 bp | TTCCCCGTGCTTGTCAAATCCTGCAGCAATCCCTACTaGATTTCGGAATTTATGGCCCAGGACTCTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: FPVLVKSCSNPY*ISEFMAQDSHF Trigger: GAAGTGAGAGTCCTGGGCCATAAATTCCGAAATCCAGTAGGGATTGCTGCAGGATTTGACAAGCACGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123605.9 ENSMUST00000128350.3 ENSMUST00000133353.8 ENSMUST00000143900.8 ENSMUST00000150804.3 |
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