Pregenerated sensors for DHH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023000Ensembl transcript IDs: ENSMUST00000023737.6, ENSMUST00000229775.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCTaGCTAGCTGGGTCAGACTGTGTTAAAGCCAAGCTCCAGGCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: NSPAGKSEGVSRQVG*LAGSDCVKAKLQAL Trigger: GAGGGCCTGGAGCTTGGCTTTAACACAGTCTGACCCAGCTAGCCAGCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 90 bp | GGGCAGGACATTGCTGGTCTATTGCTGACAGGTTGGGACACCCTTTaGAGCAAGAGGGTTTGGAAGATCGTGCTGAGGAAGAAGGGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: GQDIAGLLLTGWDTL*SKRVWKIVLRKKGK Trigger: TTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAATGTCCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 90 bp | ATGGACTTGGTTGGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTaGAACAATTGTAGCAGGATTGGGCCCAGTCCCTGGAAGTACCAC | + |
|
Preference number: 1 (lower is better) Translates to: MDLVGLEAQSRANLP*NNCSRIGPSPWKYH Trigger: GTGGTACTTCCAGGGACTGGGCCCAATCCTGCTACAATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 90 bp | AGATTTATTTGTGGCCGGGCCTTACTAAGTATCCCAGGCTGCCCTTaGACTCAAGACAATCCTCCTCTCTGCGCCCCCAGCTTGAAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: RFICGRALLSIPGCP*TQDNPPLCAPSLKN Trigger: GTTTTTCAAGCTGGGGGCGCAGAGAGGAGGATTGTCTTGAGTTCAAGGGCAGCCTGGGATACTTAGTAAGGCCCGGCCACAAATAAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | AGAATAGCTAACAATAGAGGACTCCAAGTGCTCCTCCTGCTGCCTTaGTTAGCCCCACCCCACTCACAGTTGGTATGCATCCTCACAAGT | + |
|
Preference number: 1 (lower is better) Translates to: RIANNRGLQVLLLLP*LAPPHSQLVCILTS Trigger: ACTTGTGAGGATGCATACCAACTGTGAGTGGGGTGGGGCTAACCAAGGCAGCAGGAGGAGCACTTGGAGTCCTCTATTGTTAGCTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | CTCCAATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTTaGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACAATTG | + |
|
Preference number: 1 (lower is better) Translates to: LQCHQRATYLQHGLG*LGSSEQSQSSLQQL Trigger: CAATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | TTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTaGTTGGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: FSPMPPEGNVSTAWT*LAWKLRAEPIFLAT Trigger: TGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | GGTCTATTGCTGACAGGTTGGGACACCCTTTGCAGCAAGAGGGTTTaGAAGATCGTGCTGAGGAAGAAGGGCAAATTGGAAGTAAGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: GLLLTGWDTLCSKRV*KIVLRKKGKLEVRC Trigger: ACACCTTACTTCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | ATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTTGGCTTaGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACAATTGTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: MPPEGNVSTAWTWLA*KLRAEPIFLATIVA Trigger: TGCTACAATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 90 bp | AACTATCCCTCAGATGGTAATATCCACTTCCAGGGCAGTCCTACATaGCCATCCCTAGCTCAGAGACATCAATCTACCTGCATTCCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: NYPSDGNIHFQGSPT*PSLAQRHQSTCIPV Trigger: CACTGGAATGCAGGTAGATTGATGTCTCTGAGCTAGGGATGGGCATGTAGGACTGCCCTGGAAGTGGATATTACCATCTGAGGGATAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 90 bp | AAGGTGTGGACTCGGATTAGTCCGGGTTCTCCTCCTCTTTGGAGGTaGGTGAAGGTGGTTTCCAATAAAGCCTTCCCTTTATTAACTCAC | + |
|
Preference number: 1 (lower is better) Translates to: KVWTRISPGSPPLWR*VKVVSNKAFPLLTH Trigger: GTGAGTTAATAAAGGGAAGGCTTTATTGGAAACCACCTTCACTCACCTCCAAAGAGGAGGAGAACCCGGACTAATCCGAGTCCACACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 90 bp | TTCTCCCCAAATATTTTGCATAGCCATTTGAGTGGTACTGCGGATTaGAATTGGAGCTCTGGGCACACTAGGCTAATGCTGTACTACTTG | + |
|
Preference number: 1 (lower is better) Translates to: FSPNILHSHLSGTAD*NWSSGHTRLMLYYL Trigger: CAAGTAGTACAGCATTAGCCTAGTGTGCCCAGAGCTCCAATTTCAATCCGCAGTACCACTCAAATGGCTATGCAAAATATTTGGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 90 bp | GCCATCTCCAAAGTGTTGGGATTACAAGCATGTACTCCTGGAATTTaGCCACCATTCTGGATCACTCTAGAATCTTTATTTTGGCCACAA | + |
|
Preference number: 1 (lower is better) Translates to: AISKVLGLQACTPGI*PPFWITLESLFWPQ Trigger: TTGTGGCCAAAATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTTGGAGATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 90 bp | ATCCTTCGCCATCTCCAAAGTGTTGGGATTACAAGCATGTACTCCTaGAATTTGACCACCATTCTGGATCACTCTAGAATCTTTATTTTG | + |
|
Preference number: 1 (lower is better) Translates to: ILRHLQSVGITSMYS*NLTTILDHSRIFIL Trigger: CAAAATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTTGGAGATGGCGAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGGAGAAGGCAGGGTGGCAACGGGTATTTGGTCTGTAGACTTGGGCATTGGACCTGCAGGGAAAAGTaGGGGTGTGAGCCGTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ARRRQGGNGYLVCRLGHWTCREK*GCEPSG Trigger: ACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGT...CCAATGCCCAAGTCTACAGACCAAATACCCGTTGCCACCCTGCCTTCTCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTGTAACGAGACCGGGAAAGAACGGTAGATGGGGAACCAACAGAAACAACCTCCTCCTGCTGCCTTaGTTAGCCCCACCCCACTCA | + |
|
Preference number: 2 (lower is better) Translates to: QPVTRPGKNGRWGTNRNNLLLLP*LAPPHS Trigger: TGAGTGGGGTGGGGCTAACCAAGGCAGCAGGAGGAG...GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCCCGGTCTCGTTACAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | GGGGCAGGACATTGCTGGTCTATTGCTGACAGGTTGGGACACCCTTaGCAGCAAGAGGGTTTGGAAGATCGTGCTGAGGAAGAAGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GAGHCWSIADRLGHP*QQEGLEDRAEEEGQ Trigger: TTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAATGTCCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGGAGAAGGCAGGGTGGCAACGGGTATTTGGTCTGTAGACTTGGGCATTGGGGTTGGGACACCCTTTaGAGCAAGAGGGTTTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ARRRQGGNGYLVCRLGHWGWDTL*SKRVWK Trigger: CTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACC...CCAATGCCCAAGTCTACAGACCAAATACCCGTTGCCACCCTGCCTTCTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGGGGAACCAACAGAAACAACCACTGGACCGAAGGAGGAAACTCACAATGCCTGTGAGCCGTCAGGTTaGCTGGCTAGCTGGGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: DGEPTETTTGPKEETHNACEPSG*LASWVR Trigger: TCTGACCCAGCTAGCCAGCCAACCTGACGGCTCACA...GGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | TGCAGCAAGAGGGTTTGGAAGATCGTGCTGAGGAAGAAGGGCAAATaGGAAGTAAGGTGTGGACTCGGATTAGTCCGGGTTCTCCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CSKRVWKIVLRKKGK*EVRCGLGLVRVLLL Trigger: GAGGAGGAGAACCCGGACTAATCCGAGTCCACACCTTACTTCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATAGAGGACTCCAAGTaGTCCTCCTGCTGCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VPKLRILSNATRGQRIYSIEDSK*SSCCLG Trigger: ACCAAGGCAGCAGGAGGAGCACTTGGAGTCCTCTAT...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCAGGCCCTCACCTTGGTaGGCTGGGCAAGCAGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PENNQTVLAGRMTSRLMIRPSPW*AGQAGH Trigger: ATGACCTGCTTGCCCAGCCCACCAAGGTGAGGGCCT...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | AAGCTCAGAGCAGAGCCAATCTTCCTTGCAACAATTGTAGCAGGATaGGGCCCAGTCCCTGGAAGTACCACCCACCTTAACTATCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KLRAEPIFLATIVAG*GPVPGSTTHLNYPS Trigger: TGAGGGATAGTTAAGGTGGGTGGTACTTCCAGGGACTGGGCCCAATCCTGCTACAATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | ATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATGGACTaGGTTGGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: ILSNATRGQRIYSMD*VGLEAQSRANLPCN Trigger: GTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | TGGTCTATTGCTGACAGGTTGGGACACCCTTTGCAGCAAGAGGGTTaGGAAGATCGTGCTGAGGAAGAAGGGCAAATTGGAAGTAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: WSIADRLGHPLQQEG*EDRAEEEGQIGSKV Trigger: CACCTTACTTCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | AATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTTGGCTaGGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACAATTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NATRGQRIYSMDLVG*EAQSRANLPCNNCS Trigger: GCTACAATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | TCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTaGGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACAATT | + |
|
Preference number: 2 (lower is better) Translates to: SPMPPEGNVSTAWTW*AWKLRAEPIFLATI Trigger: AATTGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | AAGATTTATTTGTGGCCGGGCCTTACTAAGTATCCCAGGCTGCCCTaGAACTCAAGACAATCCTCCTCTCTGCGCCCCCAGCTTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KIYLWPGLTKYPRLP*NSRQSSSLRPQLEK Trigger: TTTTTCAAGCTGGGGGCGCAGAGAGGAGGATTGTCTTGAGTTCAAGGGCAGCCTGGGATACTTAGTAAGGCCCGGCCACAAATAAATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGTAACGAGACCGGGAAAGAACGGTAGATGGGGAACCAACAGAAACAACTGTACTCCTGGAATTTaGCCACCATTCTGGATCACT | + |
|
Preference number: 2 (lower is better) Translates to: QPVTRPGKNGRWGTNRNNCTPGI*PPFWIT Trigger: AGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACA...GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCCCGGTCTCGTTACAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCGGAAAGAACGGTAGATaGGGAACCAACAGAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: VPKLRILSNATRGQRIYSGKNGR*GTNRNN Trigger: GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCC...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCCCTCCTCTTTGGAGGTaGGTGAAGGTGGTTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: PENNQTVLAGRMTSRLMIPPLWR*VKVVSN Trigger: ATTGGAAACCACCTTCACTCACCTCCAAAGAGGAGG...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGGTAGTAAACAGATTGCCCAGCAACACCTGGGTGATAAAACGAAAGGTATCTACAGCATGGACTTaGTTGGCTTGGAAGCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GEVVNRLPSNTWVIKRKVSTAWT*LAWKLR Trigger: TCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGA...TACCTTTCGTTTTATCACCCAGGTGTTGCTGGGCAATCTGTTTACTACCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCGGTTTCGATTTCGTATaGAGCTTGGAGGACTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PENNQTVLAGRMTSRLMIGFDFV*SLEDFC Trigger: ACAGAAGTCCTCCAAGCTTCATACGAAATCGAAACC...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCCCAAGTTAGCCTTGAACTCATTATCTTTCTGTTCTATCCTTCGCCATCTCTATTGCTGACAGGTTaGGACACCCTTTGCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TAQVSLELIIFLFYPSPSLLLTG*DTLCSK Trigger: CTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAG...AGATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 90 bp | CGCCATCTCCAAAGTGTTGGGATTACAAGCATGTACTCCTGGAATTaGACCACCATTCTGGATCACTCTAGAATCTTTATTTTGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RHLQSVGITSMYSWN*TTILDHSRIFILAT Trigger: TGTGGCCAAAATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTTGGAGATGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | CTACGCGGCGCGGCGACGTCTGCTCAGTTCCTGGGTTaGAAAGAGTTGCTGCGGTTGGAAGGTGCTCGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LRGAATSAQFLG*KELLRLEGARR Trigger: CCGCCGAGCACCTTCCAACCGCAGCAACTCTTTTCAACCCAGGAACTGAGCAGACGTCGCCGCGCCGCGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | TGTGGCCGGGCCTTACTAAGTATCCCAGGCTGCCCTTaGACTCAAGACAATCCTCCTCTCTGCGCCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CGRALLSIPGCP*TQDNPPLCAPS Trigger: GCTGGGGGCGCAGAGAGGAGGATTGTCTTGAGTTCAAGGGCAGCCTGGGATACTTAGTAAGGCCCGGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | AAAGCCTACGCGGCGCGGCGACGTCTGCTCAGTTCCTaGGTTGAAAAGAGTTGCTGCGGTTGGAAGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KAYAARRRLLSS*VEKSCCGWKVL Trigger: GAGCACCTTCCAACCGCAGCAACTCTTTTCAACCCAGGAACTGAGCAGACGTCGCCGCGCCGCGTAGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | GCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCTaGCTAGCTGGGTCAGACTGTGTTAAAGCCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGKSEGVSRQVG*LAGSDCVKAKL Trigger: GAGCTTGGCTTTAACACAGTCTGACCCAGCTAGCCAGCCAACCTGACGGCTCACACCCTCACTTTTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCCTCCAGGCCCTCACCTaGGTGGGCTGGGCAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PENNQTVLAGRMTSRLMILQALT*VGWASR Trigger: CCTGCTTGCCCAGCCCACCAAGGTGAGGGCCTGGAG...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | TCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATaGACTTGGTTGGCTTGGAAGCTCAGAGCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPMPPEGNVSTA*TWLAWKLRAEP Trigger: TGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCCTCAGCCAGCAGGTCTaGGGGCTTCGGTTTCGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VPKLRILSNATRGQRIYSLSQQV*GLRFRF Trigger: AAATCGAAACCGAAGCCCCAAGACCTGCTGGCTGAG...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTTGGCTaGGAAGCTCAGAGCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VPKLRILSNATRGQRIYSMDLVG*EAQSRA Trigger: GGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCAT...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | CGTGCTGAGGAAGAAGGGCAAATTGGAAGTAAGGTGTaGACTCGGATTAGTCCGGGTTCTCCTCCTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAEEEGQIGSKV*TRISPGSPPLW Trigger: CCAAAGAGGAGGAGAACCCGGACTAATCCGAGTCCACACCTTACTTCCAATTTGCCCTTCTTCCTCAGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | GGTGGAACCAGTACCTTAAAAGGGGCAGGACATTGCTaGTCTATTGCTGACAGGTTGGGACACCCTTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGTSTLKGAGHC*SIADRLGHPLQ Trigger: CTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAATGTCCTGCCCCTTTTAAGGTACTGGTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | CACCAGAGGGCAACGTATCTACAGCATGGACTTGGTTaGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HQRATYLQHGLG*LGSSEQSQSSL Trigger: CAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | ATGCCACCAGAGGGCAACGTATCTACAGCATGGACTTaGTTGGCTTGGAAGCTCAGAGCAGAGCCAATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MPPEGNVSTAWT*LAWKLRAEPIF Trigger: GAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGAGAAGGCAGGGTGGCAACGGGTATTTGGTCTGTAGACTTGGGCATTGGATGTACTCCTGGAATTaGACCACCATTCTGGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: ARRRQGGNGYLVCRLGHWMYSWN*TTILDH Trigger: GTGATCCAGAATGGTGGTCAAATTCCAGGAGTACAT...CCAATGCCCAAGTCTACAGACCAAATACCCGTTGCCACCCTGCCTTCTCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 72 bp | ATTGCTGGTCTATTGCTGACAGGTTGGGACACCCTTTaGAGCAAGAGGGTTTGGAAGATCGTGCTGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IAGLLLTGWDTL*SKRVWKIVLRK Trigger: CTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | CTGACAGGTTGGGACACCCTTTGCAGCAAGAGGGTTTaGAAGATCGTGCTGAGGAAGAAGGGCAAATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTGWDTLCSKRV*KIVLRKKGKLE Trigger: TTCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | GAGGGCAACGTATCTACAGCATGGACTTGGTTGGCTTaGAAGCTCAGAGCAGAGCCAATCTTCCTTGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: EGNVSTAWTWLA*KLRAEPIFLAT Trigger: TGTTGCAAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCGGGTTCTCCTCCTCTTaGGAGGTGAGTGAAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PENNQTVLAGRMTSRLMIGFSSS*EVSEGG Trigger: ACCACCTTCACTCACCTCCAAAGAGGAGGAGAACCC...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 72 bp | TCAGATGGTAATATCCACTTCCAGGGCAGTCCTACATaGCCATCCCTAGCTCAGAGACATCAATCTACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SDGNIHFQGSPT*PSLAQRHQSTC Trigger: GCAGGTAGATTGATGTCTCTGAGCTAGGGATGGGCATGTAGGACTGCCCTGGAAGTGGATATTACCATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCGCCATCTCCAAAGTGTaGGGATTACAAGCATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: VPKLRILSNATRGQRIYSAISKV*GLQACT Trigger: AGTACATGCTTGTAATCCCAACACTTTGGAGATGGC...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | ACTCGGATTAGTCCGGGTTCTCCTCCTCTTTGGAGGTaGGTGAAGGTGGTTTCCAATAAAGCCTTCCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TRISPGSPPLWR*VKVVSNKAFPL Trigger: TAAAGGGAAGGCTTTATTGGAAACCACCTTCACTCACCTCCAAAGAGGAGGAGAACCCGGACTAATCCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | ACCGAAGGAGGAAACTCACAATGCCACACTAGAACTTaGCCACAGATACACCCAAGCCAAAACCTGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: TEGGNSQCHTRT*PQIHPSQNLEQ Trigger: CTGTTCCAGGTTTTGGCTTGGGTGTATCTGTGGTCAAGTTCTAGTGTGGCATTGTGAGTTTCCTCCTTCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | TCAGGAACTGTTCGACGCTCTATTTACTATTATCTCTaGCCACAGGACTTGAGGGTCACCAGAGTGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGTVRRSIYYYL*PQDLRVTRVRD Trigger: GTCCCTCACTCTGGTGACCCTCAAGTCCTGTGGTCAGAGATAATAGTAAATAGAGCGTCGAACAGTTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR GCA 72 bp | ACATGCCCATCCCTAGCTCAGAGACATCAATCTACCTaGATTCCAGTGGTCTGCGATGTTGGAGTCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCPSLAQRHQST*IPVVCDVGVQK Trigger: TTTTTGGACTCCAACATCGCAGACCACTGGAATGCAGGTAGATTGATGTCTCTGAGCTAGGGATGGGCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | AAGAACGGTAGATGGGGAACCAACAGAAACAACCACTaGACCGAAGGAGGAAACTCACAATGCCACACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNGRWGTNRNNH*TEGGNSQCHTR Trigger: TCTAGTGTGGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATCTACCGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGGAACCAACAGAAACAACCACTGGACCGAAGGAGGAAACTCACAATGCCTCTAGAATCTTTATTTaGGCCACAAATGTGTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: DGEPTETTTGPKEETHNASRIFI*ATNVWR Trigger: CCGCCACACATTTGTGGCCAAAATAAAGATTCTAGA...GGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGTAACGAGACCGGGAAAGAACGGTAGATGGGGAACCAACAGAAACAACCAGCCCAAGTTAGCCTaGAACTCATTATCTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QPVTRPGKNGRWGTNRNNQPKLA*NSLSFC Trigger: ACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTG...GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCCCGGTCTCGTTACAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAGGTAGTAAACAGATTGCCCAGCAACACCTGGGTGATAAAACGAAAGGTAGCAGTACATTTCCCTTaGGTACAGAGGGAACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GEVVNRLPSNTWVIKRKVAVHFP*VQREPK Trigger: CTTTGGTTCCCTCTGTACCAAAGGGAAATGTACTGC...TACCTTTCGTTTTATCACCCAGGTGTTGCTGGGCAATCTGTTTACTACCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCAACCTGGAACAGGTTTaGAGAAATTATTCAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPKLRILSNATRGQRIYSNLEQV*RNYSGH Trigger: ATGACCTGAATAATTTCTCAAAACCTGTTCCAGGTT...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | TTAGGGGAGGTAGTAAACAGATTGCCCAGCAACACCTaGGTGATAAAACGAAAGGTACCAGAATCTAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGEVVNRLPSNT*VIKRKVPESKR Trigger: CCTCTTAGATTCTGGTACCTTTCGTTTTATCACCCAGGTGTTGCTGGGCAATCTGTTTACTACCTCCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CCA 72 bp | CATCTCCAAAGTGTTGGGATTACAAGCATGTACTCCTaGAATTTGACCACCATTCTGGATCACTCTAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: HLQSVGITSMYS*NLTTILDHSRI Trigger: GATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTTGGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR TCA 72 bp | AAAGTGTTGGGATTACAAGCATGTACTCCTGGAATTTaGCCACCATTCTGGATCACTCTAGAATCTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KVLGLQACTPGI*PPFWITLESLF Trigger: AAATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | CCTACGCGGCGCGGCGACGTCTGCTCAGTTCCTGGGTaGAAAAGAGTTGCTGCGGTTGGAAGGTGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTRRGDVCSVPG*KRVAAVGRCSA Trigger: CGCCGAGCACCTTCCAACCGCAGCAACTCTTTTCAACCCAGGAACTGAGCAGACGTCGCCGCGCCGCGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | GGCTCACATCCCCAGATCTCAGCCAGCAGGTCTTGGGGCTTCGGTTTCGATTTCTGCATGCCAGTCGGCTaGACTGCACCCCCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPQISASRSWGFGFDFCMPVG*TAPPGS Trigger: GCTCCCTGGGGGTGCAGTCCAGCCGACTGGCATGCA...GAAATCGAAACCGAAGCCCCAAGACCTGCTGGCTGAGATCTGGGGATGTGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGGAGAAGGCAGGGTGGCAACGGGTATTTGGTCTGTAGACTTGGGCATTGGGTGCGCAGTGAGCGGTaGGAACACGCCCACGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARRRQGGNGYLVCRLGHWVRSER*EHAHGF Trigger: GAAGCCGTGGGCGTGTTCGCACCGCTCACTGCGCAC...CCAATGCCCAAGTCTACAGACCAAATACCCGTTGCCACCCTGCCTTCTCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTTATTAACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCAACGAGGCGCGGCGCTaGAGATCCCGGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFINSPAGKSEGVSRQVGNEARR*RSRSRK Trigger: CTTCCTGGACCGGGATCTGCAGCGCCGCGCCTCGTT...GCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTTAATAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCAAGCTTAGAATTCTCTCCAATGCCACCAGAGGGCAACGTATCTACAGCCGGTGCAAAGTCACCTaGAGCAGGCGCTGGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPKLRILSNATRGQRIYSRCKVT*SRRWPA Trigger: CGCGGGCCAGCGCCTGCTCCAGGTGACTTTGCACCG...GCTGTAGATACGTTGCCCTCTGGTGGCATTGGAGAGAATTCTAAGCTTGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | GGCTCACATCCCCAGATCTCAGCCAGCAGGTCTTGGGGCTTCGGTTTCGATTTCTGTCATCAGGCGGTCTaGGCCGCTGTTCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPQISASRSWGFGFDFCHQAV*AAVLLI Trigger: GATGAGGAGAACAGCGGCGCAGACCGCCTGATGACA...GAAATCGAAACCGAAGCCCCAAGACCTGCTGGCTGAGATCTGGGGATGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | TTGTGGCCGGGCCTTACTAAGTATCCCAGGCTGCCCTaGAACTCAAGACAATCCTCCTCTCTGCGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWPGLTKYPRLP*NSRQSSSLRPQ Trigger: CTGGGGGCGCAGAGAGGAGGATTGTCTTGAGTTCAAGGGCAGCCTGGGATACTTAGTAAGGCCCGGCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | GATGGGGAACCAACAGAAACAACCACTGGACCGAAGGAGGAAACTCACAATGCCGCGCGCGAACACCGGTaGAAAGTCACCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGEPTETTTGPKEETHNAAREHR*KVTWSR Trigger: CCTGCTCCAGGTGACTTTGCACCGGTGTTCGCGCGC...GGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | CCCTTTATTAACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCTGTCGGGGTTGTAGTTaGGTACGAGGTCCCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFINSPAGKSEGVSRQVGCRGCS*VRGPGS Trigger: GCTTCCGGGACCTCGTACCCAACTACAACCCCGACA...GCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTTAATAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGTAACGAGACCGGGAAAGAACGGTAGATGGGGAACCAACAGAAACAACTCCGCAAGCGCACCGTaGCATTTCCCGGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPVTRPGKNGRWGTNRNNSASAP*HFPESS Trigger: GCTGCTTTCCGGGAAATGCCACGGTGCGCTTGCGGA...GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCCCGGTCTCGTTACAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGATCGTGCTGAGGAAGAAGGGCAAATTGGAAGTAAGGTGTGGACTCGGCCAGATGCCAGGGTGTaGGCAACAGTTTGCGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEDRAEEEGQIGSKVWTRPDARV*ATVCAE Trigger: CTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGG...CCGAGTCCACACCTTACTTCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR TCA 90 bp | ACAGCCCAAGTTAGCCTTGAACTCATTATCTTTCTGTTCTATCCTTCGCCATCTGCGTCCCGTGCGCAGTaGGCGGTGCGAACACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAQVSLELIIFLFYPSPSASRAQ*AVRTRP Trigger: TGGGCGTGTTCGCACCGCTCACTGCGCACGGGACGC...AGATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTTATTAACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCCGTTCACCCGCTCTTTaGAACGCTCTGTCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFINSPAGKSEGVSRQVGRSPAL*NALSSG Trigger: GCCTGATGACAGAGCGTTGCAAAGAGCGGGTGAACG...GCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTTAATAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | TCGGGTAAAAGTTGCCTAAACCAAGAAGTTCCTAGTACAGCCCACCTTTCTCTCACCAGCAGCGTCCCGTaGGCAGTGAGCGGTGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSCLNQEVPSTAHLSLTSSVP*AVSGAN Trigger: GTTCGCACCGCTCACTGCGCACGGGACGCTGCTGGT...GAGAGAAAGGTGGGCTGTACTAGGAACTTCTTGGTTTAGGCAACTTTTACCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | TCGGGTAAAAGTTGCCTAAACCAAGAAGTTCCTAGTACAGCCCACCTTTCTCTCAGAGCAGCACTGGCGTaGGTACCACTCGGCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSCLNQEVPSTAHLSLRAALA*VPLGPL Trigger: CAGCGGGCCGAGTGGTACCCACGCCAGTGCTGCTCT...GAGAGAAAGGTGGGCTGTACTAGGAACTTCTTGGTTTAGGCAACTTTTACCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR TCA 90 bp | ACAGCCCAAGTTAGCCTTGAACTCATTATCTTTCTGTTCTATCCTTCGCCATCTAGGCGAGGACGTCGTTaGCCAGCAGCGTCCCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAQVSLELIIFLFYPSPSRRGRR*PAASRA Trigger: CGCACGGGACGCTGCTGGTCAACGACGTCCTCGCCT...AGATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTTATTAACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCATACGTGGATGTGGTTaGGGGACTCGTAGTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PFINSPAGKSEGVSRQVGIRGCG*GTRSRP Trigger: GGGTCTACTACGAGTCCCGCAACCACATCCACGTAT...GCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTTAATAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | TCGGGTAAAAGTTGCCTAAACCAAGAAGTTCCTAGTACAGCCCACCTTTCTCTCCCCGGCCCGCAGCTCTaGGCAGATAGTGCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKSCLNQEVPSTAHLSLPGPQL*ADSAKS Trigger: ACTCTTGGCACTATCTGCCCAGAGCTGCGGGCCGGG...GAGAGAAAGGTGGGCTGTACTAGGAACTTCTTGGTTTAGGCAACTTTTACCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | GATGGGGAACCAACAGAAACAACCACTGGACCGAAGGAGGAAACTCACAATGCCGCTTTGACCGATACGTaGATGTGGTTGCGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DGEPTETTTGPKEETHNAALTDT*MWLRDS Trigger: CGAGTCCCGCAACCACATCCACGTATCGGTCAAAGC...GGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | GCTGACAGGTTGGGACACCCTTTGCAGCAAGAGGGTTaGGAAGATCGTGCTGAGGAAGAAGGGCAAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADRLGHPLQQEG*EDRAEEEGQIG Trigger: TCCAATTTGCCCTTCTTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | GCAGAGCCAATCTTCCTTGCAACAATTGTAGCAGGATaGGGCCCAGTCCCTGGAAGTACCACCCACCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AEPIFLATIVAG*GPVPGSTTHLN Trigger: GTTAAGGTGGGTGGTACTTCCAGGGACTGGGCCCAATCCTGCTACAATTGTTGCAAGGAAGATTGGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | CCACCAGAGGGCAACGTATCTACAGCATGGACTTGGTaGGCTTGGAAGCTCAGAGCAGAGCCAATCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPEGNVSTAWTW*AWKLRAEPIFL Trigger: AAGGAAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR TCA 90 bp | TCGGGTAAAAGTTGCCTAAACCAAGAAGTTCCTAGTACAGCCCACCTTTCTCTCGCCTTCGTAGTGGAGTaGATCCTGTGCGTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSCLNQEVPSTAHLSLAFVVE*ILCVVA Trigger: GGCCACCACGCACAGGATTCACTCCACTACGAAGGC...GAGAGAAAGGTGGGCTGTACTAGGAACTTCTTGGTTTAGGCAACTTTTACCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | CATTGCTGGTCTATTGCTGACAGGTTGGGACACCCTTaGCAGCAAGAGGGTTTGGAAGATCGTGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCWSIADRLGHP*QQEGLEDRAEE Trigger: TTCCTCAGCACGATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | AAAGGGGCAGGACATTGCTGGTCTATTGCTGACAGGTaGGGACACCCTTTGCAGCAAGAGGGTTTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGAGHCWSIADR*GHPLQQEGLED Trigger: ATCTTCCAAACCCTCTTGCTGCAAAGGGTGTCCCAACCTGTCAGCAATAGACCAGCAATGTCCTGCCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | AATGCCACCAGAGGGCAACGTATCTACAGCATGGACTaGGTTGGCTTGGAAGCTCAGAGCAGAGCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NATRGQRIYSMD*VGLEAQSRANL Trigger: AAGATTGGCTCTGCTCTGAGCTTCCAAGCCAACCAAGTCCATGCTGTAGATACGTTGCCCTCTGGTGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCGCAGCGAACACCAGATaGCAGGGTGTGAGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PENNQTVLAGRMTSRLMIAANTR*QGVSNS Trigger: ACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGC...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCGAGAGTACCAATGCATaGCAGTCGGCTGGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PENNQTVLAGRMTSRLMIESTNA*QSAGLH Trigger: GTGCAGTCCAGCCGACTGGCATGCATTGGTACTCTC...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGTAACGAGACCGGGAAAGAACGGTAGATGGGGAACCAACAGAAACAACATACTGGGCACAAACTaGTTGTATAGCAGAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPVTRPGKNGRWGTNRNNILGTN*LYSRGT Trigger: TGTGCCTCTGCTATACAAGCAGTTTGTGCCCAGTAT...GTTGTTTCTGTTGGTTCCCCATCTACCGTTCTTTCCCGGTCTCGTTACAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR GCA 90 bp | ACAGCCCAAGTTAGCCTTGAACTCATTATCTTTCTGTTCTATCCTTCGCCATCTAGGCGAGAGTACCAATaGATGCCAGTCGGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TAQVSLELIIFLFYPSPSRREYQ*MPVGWT Trigger: AGTCCAGCCGACTGGCATGCATTGGTACTCTCGCCT...AGATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | TGGAGCTCTGGGCACACTAGGCTAATGCTGTACTACTaGAGTATATTCCCAGTCAGCCATGATGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSGHTRLMLYY*SIFPVSHDGFL Trigger: CAGAAAACCATCATGGCTGACTGGGAATATACTCAAGTAGTACAGCATTAGCCTAGTGTGCCCAGAGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CCA 90 bp | ACAGCCCAAGTTAGCCTTGAACTCATTATCTTTCTGTTCTATCCTTCGCCATCTTCCGCTCGGGCATACTaGGCACAAACTGCTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: TAQVSLELIIFLFYPSPSSARAY*AQTACI Trigger: TATACAAGCAGTTTGTGCCCAGTATGCCCGAGCGGA...AGATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | GCAAGCGCGTGTTCTACTATACAGCCCAAGTTAGCCTaGAACTCATTATCTTTCTGTTCTATCCTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASACSTIQPKLA*NSLSFCSILRH Trigger: ATGGCGAAGGATAGAACAGAAAGATAATGAGTTCAAGGCTAACTTGGGCTGTATAGTAGAACACGCGCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | TTGACCACCATTCTGGATCACTCTAGAATCTTTATTTaGGCCACAAATGTGTGGCGGATTGTAAGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LTTILDHSRIFI*ATNVWRIVRNT Trigger: GGTGTTCCTTACAATCCGCCACACATTTGTGGCCAAAATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| 3UTR CAA 72 bp | CAAAGTGTTGGGATTACAAGCATGTACTCCTGGAATTaGACCACCATTCTGGATCACTCTAGAATCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QSVGITSMYSWN*TTILDHSRIFI Trigger: AATAAAGATTCTAGAGTGATCCAGAATGGTGGTCAAATTCCAGGAGTACATGCTTGTAATCCCAACACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 90 bp | GGCGAGGACGTCGTTGACCAGCAGCGTCCCGTGCGCAGTGAGCGGTaGGAACACGCCCACGGCTTCCTCGCGCGCCACGCGGGCTACGCG | + |
|
Preference number: 5 (lower is better) Translates to: GEDVVDQQRPVRSER*EHAHGFLARHAGYA Trigger: CGCGTAGCCCGCGTGGCGCGCGAGGAAGCCGTGGGCGTGTTCGCACCGCTCACTGCGCACGGGACGCTGCTGGTCAACGACGTCCTCGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 90 bp | CGCGGAGGCCGCTCGGTCTCCACAGCCACGAACGAGGCGCGGCGCTaGAGATCCCGGTCCAGGAAGAGCAGCACTGGCGTGGGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: RGGRSVSTATNEARR*RSRSRKSSTGVGTT Trigger: AGTGGTACCCACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGCGCCGCGCCTCGTTCGTGGCTGTGGAGACCGAGCGGCCTCCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 90 bp | AGGCGCGGCGCTGCAGATCCCGGTCCAGGAAGAGCAGCACTGGCGTaGGTACCACTCGGCCCGCTGCATCAGCGGCCAGTACCCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRGAADPGPGRAALA*VPLGPLHQRPVPSH Trigger: GTGACTGGGTACTGGCCGCTGATGCAGCGGGCCGAGTGGTACCCACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGCGCCGCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 90 bp | GAACGAGGCGCGGCGCTGCAGATCCCGGTCCAGGAAGAGCAGCACTaGCGTGGGTACCACTCGGCCCGCTGCATCAGCGGCCAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERGAALQIPVQEEQH*RGYHSARCISGQYP Trigger: TGGGTACTGGCCGCTGATGCAGCGGGCCGAGTGGTACCCACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGCGCCGCGCCTCGTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS TCA 90 bp | GAGCAGGCGCTGGCCCGCGAGCAGCGAACACCAGATGCCAGGGTGTaGGCAACAGTTTGCGCGGAGGCCGCTCGGTCTCCACAGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: EQALAREQRTPDARV*ATVCAEAARSPQPR Trigger: TCGTGGCTGTGGAGACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGCTCGCGGGCCAGCGCCTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 90 bp | AAGTCACCTGGAGCAGGCGCTGGCCCGCGAGCAGCGAACACCAGATaGCAGGGTGTGAGCAACAGTTTGCGCGGAGGCCGCTCGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSPGAGAGPRAANTR*QGVSNSLRGGRSVS Trigger: GGAGACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGCTCGCGGGCCAGCGCCTGCTCCAGGTGACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 90 bp | GCGGTAAAGGAGGCGAGAGTACCAATGCATGCCAGTCGGCTGGACTaGACCCCCAGGGAGCAGAGCCCCGAGCGCGTGCAGCAGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AVKEARVPMHASRLD*TPREQSPERVQQPQ Trigger: TTGCGGCTGCTGCACGCGCTCGGGGCTCTGCTCCCTGGGGGTGCAGTCCAGCCGACTGGCATGCATTGGTACTCTCGCCTCCTTTACCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 90 bp | GTAGTTCCCTCAGCCCCTTCCGTTCGCCGCTCCGCAAGCGCACCGTaGCATTTCCCGGAAAGCAGCCTCCGGCTCGGACCGCCAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVPSAPSVRRSASAP*HFPESSLRLGPPVS Trigger: ACTCACTGGCGGTCCGAGCCGGAGGCTGCTTTCCGGGAAATGCCACGGTGCGCTTGCGGAGCGGCGAACGGAAGGGGCTGAGGGAACTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 90 bp | GCATACTGGGCACAAACTGCTTGTATAGCAGAGGCACAAGTTGCTTaGGCACATAACGCCGCCGGCCAACCGGTCCTCGGCCCGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AYWAQTACIAEAQVA*AHNAAGQPVLGPAR Trigger: GCGGGCCGGGCCGAGGACCGGTTGGCCGGCGGCGTTATGTGCGCAAGCAACTTGTGCCTCTGCTATACAAGCAGTTTGTGCCCAGTATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023737.6 ENSMUST00000229775.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCACATCCCCAGATCTCAGCCAGCAGGTCTTGGGGCTTCGGTTTCGATTTCGAGGCGAGGACGTCGTaGACCAGCAGCGTCCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSHPQISASRSWGFGFDFEARTS*TSSVPC Trigger: GCACGGGACGCTGCTGGTCAACGACGTCCTCGCCTC...GAAATCGAAACCGAAGCCCCAAGACCTGCTGGCTGAGATCTGGGGATGTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTTATTAACTCACCTGCAGGGAAAAGTGAGGGTGTGAGCCGTCAGGTTGGCAGCGCTCCGACCCCCTaGTTACCCTCCCCTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFINSPAGKSEGVSRQVGSAPTP*LPSPPL Trigger: CAGCGGAGGGGAGGGTAACAAGGGGGTCGGAGCGCT...GCCAACCTGACGGCTCACACCCTCACTTTTCCCTGCAGGTGAGTTAATAAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS-3UTR CAA 90 bp | CCAGAAAATAATCAGACCGTTTTAGCAGGCAGGATGACCTCTAGGCTGATGATCGGTGTGAGCAACAGTTaGCGCGGAGGCCGCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PENNQTVLAGRMTSRLMIGVSNS*RGGRSV Trigger: GACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACC...GATCATCAGCCTAGAGGTCATCCTGCCTGCTAAAACGGTCTGATTATTTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 90 bp | AGGAACAGTTCATCCTCCAGGGTTGTTGTAGGAAAATTGAGGAGCTaGTGGTGTGGTAGAGCAGGTGGGGAGAAACTCTCCTTACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNSSSSRVVVGKLRS*WCGRAGGEKLSLPL Trigger: CAGAGGTAAGGAGAGTTTCTCCCCACCTGCTCTACCACACCACCAGCTCCTCAATTTTCCTACAACAACCCTGGAGGATGAACTGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229775.2 |
||
| CDS-3UTR CAA 90 bp | GATGGGGAACCAACAGAAACAACCACTGGACCGAAGGAGGAAACTCACAATGCCCTGGGCACAAACTGCTaGTATAGCAGAGGCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DGEPTETTTGPKEETHNALGTNC*YSRGTS Trigger: ACTTGTGCCTCTGCTATACAAGCAGTTTGTGCCCAG...GGCATTGTGAGTTTCCTCCTTCGGTCCAGTGGTTGTTTCTGTTGGTTCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 90 bp | AACAGTTCATCCTCCAGGGTTGTTGTAGGAAAATTGAGGAGCTGGTaGTGTGGTAGAGCAGGTGGGGAGAAACTCTCCTTACCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSSSSRVVVGKLRSW*CGRAGGEKLSLPLS Trigger: TGACAGAGGTAAGGAGAGTTTCTCCCCACCTGCTCTACCACACCACCAGCTCCTCAATTTTCCTACAACAACCCTGGAGGATGAACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229775.2 |
||
| CDS CCA 72 bp | CGCCGGCCAACCGGTCCTCGGCCCGGCCCGCAGCTCTaGGCAGATAGTGCCAAGAGTGCCAAGCAGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPTGPRPGPQL*ADSAKSAKQHR Trigger: CCTGTGCTGCTTGGCACTCTTGGCACTATCTGCCCAGAGCTGCGGGCCGGGCCGAGGACCGGTTGGCCGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023737.6 ENSMUST00000229775.2 |
||
| CDS CAA 90 bp | GGCCCGCGAGCAGCGAACACCAGATGCCAGGGTGTGAGCAACAGTTaGCGCGGAGGCCGCTCGGTCTCCACAGCCACGAACGAGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRAANTRCQGVSNS*RGGRSVSTATNEAR Trigger: CCGCGCCTCGTTCGTGGCTGTGGAGACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGCTCGCGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 72 bp | CGCTCGGTCTCCACAGCCACGAACGAGGCGCGGCGCTaGAGATCCCGGTCCAGGAAGAGCAGCACTGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSVSTATNEARR*RSRSRKSSTGV Trigger: CACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGCGCCGCGCCTCGTTCGTGGCTGTGGAGACCGAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 72 bp | CAGGAGGCGAGGACGTCGTTGACCAGCAGCGTCCCGTaGGCAGTGAGCGGTGCGAACACGCCCACGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QEARTSLTSSVP*AVSGANTPTAS Trigger: GGAAGCCGTGGGCGTGTTCGCACCGCTCACTGCGCACGGGACGCTGCTGGTCAACGACGTCCTCGCCTCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 72 bp | TCAGCCCCTTCCGTTCGCCGCTCCGCAAGCGCACCGTaGCATTTCCCGGAAAGCAGCCTCCGGCTCGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: SAPSVRRSASAP*HFPESSLRLGP Trigger: CGGTCCGAGCCGGAGGCTGCTTTCCGGGAAATGCCACGGTGCGCTTGCGGAGCGGCGAACGGAAGGGGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS TCA 72 bp | CTGGCCCGCGAGCAGCGAACACCAGATGCCAGGGTGTaGGCAACAGTTTGCGCGGAGGCCGCTCGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAREQRTPDARV*ATVCAEAARSP Trigger: TGGAGACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGCTCGCGGGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CCA 72 bp | GCTGCAGATCCCGGTCCAGGAAGAGCAGCACTGGCGTaGGTACCACTCGGCCCGCTGCATCAGCGGCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AADPGPGRAALA*VPLGPLHQRPV Trigger: TACTGGCCGCTGATGCAGCGGGCCGAGTGGTACCCACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CAA 72 bp | GCAGCGAACACCAGATGCCAGGGTGTGAGCAACAGTTaGCGCGGAGGCCGCTCGGTCTCCACAGCCACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AANTRCQGVSNS*RGGRSVSTATN Trigger: GTTCGTGGCTGTGGAGACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 72 bp | TCATCACCGCGATGGCTAGAGCGTTCACCCGCTCTTTaGAACGCTCTGTCATCAGGCGGTCTGCGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPRWLERSPAL*NALSSGGLRRC Trigger: ACAGCGGCGCAGACCGCCTGATGACAGAGCGTTGCAAAGAGCGGGTGAACGCTCTAGCCATCGCGGTGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS CAA 72 bp | TTCATCACCGCGATGGCTAGAGCGTTCACCCGCTCTTaGCAACGCTCTGTCATCAGGCGGTCTGCGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FITAMARAFTRS*QRSVIRRSAPL Trigger: CAGCGGCGCAGACCGCCTGATGACAGAGCGTTGCAAAGAGCGGGTGAACGCTCTAGCCATCGCGGTGATGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023737.6 |
||
| CDS GCA 72 bp | GCACAAACTGCTTGTATAGCAGAGGCACAAGTTGCTTaGGCACATAACGCCGCCGGCCAACCGGTCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQTACIAEAQVA*AHNAAGQPVLG Trigger: GCCGAGGACCGGTTGGCCGGCGGCGTTATGTGCGCAAGCAACTTGTGCCTCTGCTATACAAGCAGTTTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023737.6 ENSMUST00000229775.2 |
||
| CDS CCA 72 bp | TCATCCTCCAGGGTTGTTGTAGGAAAATTGAGGAGCTaGTGGTGTGGTAGAGCAGGTGGGGAGAAACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRVVVGKLRS*WCGRAGGEKLS Trigger: GGAGAGTTTCTCCCCACCTGCTCTACCACACCACCAGCTCCTCAATTTTCCTACAACAACCCTGGAGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229775.2 |
||
| CDS CCA 72 bp | TCCTCCAGGGTTGTTGTAGGAAAATTGAGGAGCTGGTaGTGTGGTAGAGCAGGTGGGGAGAAACTCTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSRVVVGKLRSW*CGRAGGEKLSL Trigger: TAAGGAGAGTTTCTCCCCACCTGCTCTACCACACCACCAGCTCCTCAATTTTCCTACAACAACCCTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229775.2 |
||