Pregenerated sensors for DHFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021707Ensembl transcript IDs: ENSMUST00000022218.6
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTCAGACAGCTCTGCTGGTCTCTGCTTTGCCAGGAGGCTCAGTTaGTCTTCTAGACAGCTCAGCGTGTCTCAGAGCCCCTCGGCAATC | + |
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Preference number: 1 (lower is better) Translates to: PSDSSAGLCFARRLS*SSRQLSVSQSPSAI Trigger: GATTGCCGAGGGGCTCTGAGACACGCTGAGCTGTCTAGAAGACCAACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCTGTCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | GAGTTCGGTAGGTCCAAGCCTCCTTCAGACAGCTCTGCTGGTCTCTaGTTTGCCAGGAGGCTCAGTTGGTCTTCTAGACAGCTCAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: EFGRSKPPSDSSAGL*FARRLSWSSRQLSV Trigger: CACGCTGAGCTGTCTAGAAGACCAACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCTGTCTGAAGGAGGCTTGGACCTACCGAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 90 bp | GGACATGGCATGGACACCACACTCACAAGCTCACAGCAGCTGTGGTaGTCTGCAGACCCATATTCTAGCTTGGATGGAGGAGAGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GHGMDTTLTSSQQLW*SADPYSSLDGGEAP Trigger: AGGAGCCTCTCCTCCATCCAAGCTAGAATATGGGTCTGCAGATCACCACAGCTGCTGTGAGCTTGTGAGTGTGGTGTCCATGCCATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACTGGCAGGCTaGCCGTACTCCAGTGGACAGCACACATGCAGGAACATGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCPLAG*PYSSGQHTCRNMKK Trigger: TTTCTTCATGTTCCTGCATGTGTGCTGTCCACTGGAGTACGGGCAGCCTGCCAGTGGACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 90 bp | CAAGCTCACAGCAGCTGTGGTGATCTGCAGACCCATATTCTAGCTTaGATGGAGGAGAGGCTCCTAAGACTGCACCCAGCTGAAGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: QAHSSCGDLQTHILA*MEERLLRLHPAEEL Trigger: TAGCTCTTCAGCTGGGTGCAGTCTTAGGAGCCTCTCCTCCATCCAAGCTAGAATATGGGTCTGCAGATCACCACAGCTGCTGTGAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 90 bp | GCCTGGGGAATAGGGCCATGTATATATAATGCTGCCTTCTGGACATaGCATGGACACCACACTCACAAGCTCACAGCAGCTGTGGTGATC | + |
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Preference number: 1 (lower is better) Translates to: AWGIGPCIYNAAFWT*HGHHTHKLTAAVVI Trigger: GATCACCACAGCTGCTGTGAGCTTGTGAGTGTGGTGTCCATGCCATGTCCAGAAGGCAGCATTATATATACATGGCCCTATTCCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 90 bp | CCTGAAGCCTGGGGAATAGGGCCATGTATATATAATGCTGCCTTCTaGACATGGCATGGACACCACACTCACAAGCTCACAGCAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PEAWGIGPCIYNAAF*TWHGHHTHKLTAAV Trigger: CACAGCTGCTGTGAGCTTGTGAGTGTGGTGTCCATGCCATGTCCAGAAGGCAGCATTATATATACATGGCCCTATTCCCCAGGCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 90 bp | GCATCACCAAAAGCCCGTTCCAGCAGAGTCACAGCTCAGGAAACCTaGAGTGTATTAGACAACCTACAGGCAGCTCAACAGGTTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ASPKARSSRVTAQET*SVLDNLQAAQQVPV Trigger: CACTGGAACCTGTTGAGCTGCCTGTAGGTTGTCTAATACACTCCAGGTTTCCTGAGCTGTGACTCTGCTGGAACGGGCTTTTGGTGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | CACACCACTGCCAGGGTTACAAACATATGCTACTGTACTTGCCTCTaGCTGAGCACCAGGGATCCAAATCATTGTATAACACACCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: HTTARVTNICYCTCL*LSTRDPNHCITHLL Trigger: CAGGAGGTGTGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCATATGTTTGTAACCCTGGCAGTGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 90 bp | GACTTGTCTAAGGCTCAGGGAGCACTGAAGAAGTGGTGGAAAGAATaGAGGCCTGAAGCCTGGGGAATAGGGCCATGTATATATAATGCT | + |
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Preference number: 1 (lower is better) Translates to: DLSKAQGALKKWWKE*RPEAWGIGPCIYNA Trigger: AGCATTATATATACATGGCCCTATTCCCCAGGCTTCAGGCCTTCATTCTTTCCACCACTTCTTCAGTGCTCCCTGAGCCTTAGACAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | CCATACCACACCACTGCCAGGGTTACAAACATATGCTACTGTACTTaGCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACACAC | + |
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Preference number: 1 (lower is better) Translates to: PYHTTARVTNICYCT*LCLSTRDPNHCITH Trigger: GTGTGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCATATGTTTGTAACCCTGGCAGTGGTGTGGTATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 90 bp | GTGTCTAGATTTCCAGGGTGCTTTTGTCTTTCGTTTTGGCATGTATaGGGTGTTCTCTTGGTCTTATCCACAGTGAAACTGCTGCGTGCT | + |
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Preference number: 1 (lower is better) Translates to: VSRFPGCFCLSFWHV*GVLLVLSTVKLLRA Trigger: AGCACGCAGCAGTTTCACTGTGGATAAGACCAAGAGAACACCTCATACATGCCAAAACGAAAGACAAAAGCACCCTGGAAATCTAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 90 bp | GGCACATTTACAACACATTTACTTGCAGGACATAGAGAATCAATCTaGAGCTGCCTGGAAACTTCCTCCTTCACTGGACAGTTTTCAGCG | + |
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Preference number: 1 (lower is better) Translates to: GTFTTHLLAGHRESI*SCLETSSFTGQFSA Trigger: CGCTGAAAACTGTCCAGTGAAGGAGGAAGTTTCCAGGCAGCTCCAGATTGATTCTCTATGTCCTGCAAGTAAATGTGTTGTAAATGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | CTGCATGTTACAGTTTCTACTGAACAACAATGGCATGCCTGTCAATaGTTCCTAGTTGGATTTGAGGCCGGCTCTATAGGAGACAATTCA | + |
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Preference number: 1 (lower is better) Translates to: LHVTVSTEQQWHACQ*FLVGFEAGSIGDNS Trigger: TGAATTGTCTCCTATAGAGCCGGCCTCAAATCCAACTAGGAAGCATTGACAGGCATGCCATTGTTGTTCAGTAGAAACTGTAACATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | TCACCAGGGAGAAAAGCTTTTATGGACTTAGTTGGTGGTAGGCCCTaGATGTTACAGTTTCTACTGAACAACAATGGCATGCCTGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SPGRKAFMDLVGGRP*MLQFLLNNNGMPVN Trigger: ATTGACAGGCATGCCATTGTTGTTCAGTAGAAACTGTAACATGCAGGGCCTACCACCAACTAAGTCCATAAAAGCTTTTCTCCCTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 90 bp | TCAAAACAGCTTCCTTCTAAGACAGGTTTTGACCTTAGAGGAAACTaGTACATAACACAAACTGGCTCACCTGCTTCATGGGCTAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SKQLPSKTGFDLRGN*YITQTGSPASWASS Trigger: TGAGCTAGCCCATGAAGCAGGTGAGCCAGTTTGTGTTATGTAGCAGTTTCCTCTAAGGTCAAAACCTGTCTTAGAAGGAAGCTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 90 bp | TTTGAATGGAGGCATCCTACACACTGGTGGACAATGCTTACTAAATaGAGACCTAGGTTATTAAATGAAACTCTCAGTGCCAGGTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: FEWRHPTHWWTMLTK*RPRLLNETLSARCG Trigger: CCCACACCTGGCACTGAGAGTTTCATTTAATAACCTAGGTCTTCATTTAGTAAGCATTGTCCACCAGTGTGTAGGATGCCTCCATTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 90 bp | CATGGAACACAATGGAGTTCTCCATTTACTGATTTTCTGTCTGAGTaGGCAGAGCTTTGCTGCAAGTGTGATGTGCATACAATAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: HGTQWSSPFTDFLSE*AELCCKCDVHTIIQ Trigger: CTGGATTATTGTATGCACATCACACTTGCAGCAAAGCTCTGCTCACTCAGACAGAAAATCAGTAAATGGAGAACTCCATTGTGTTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 90 bp | TCGGTAGGTCCAAGCCTCCTTCAGACAGCTCTGCTGGTCTCTGCTTaGCCAGGAGGCTCAGTTGGTCTTCTAGACAGCTCAGCGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SVGPSLLQTALLVSA*PGGSVGLLDSSACL Trigger: GAGACACGCTGAGCTGTCTAGAAGACCAACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCTGTCTGAAGGAGGCTTGGACCTACCGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCGTGGGGGAGTGGGGATaGGGACCTGGTATGATTAAG | + |
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Preference number: 2 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGVGEWG*GPGMIK Trigger: CTTAATCATACCAGGTCCTCATCCCCACTCCCCCAC...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGAGAAAGAATGAAGGCCTaGAGCCTGGGGAATAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGERMKA*SLGNRA Trigger: GGCCCTATTCCCCAGGCTTCAGGCCTTCATTCTTTC...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 90 bp | GGTCTTCTAGACAGCTCAGCGTGTCTCAGAGCCCCTCGGCAATCATaGCTTATCTATGCTTGGGGAGGGAGGAGTCTAGTGTACCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: GLLDSSACLRAPRQS*LIYAWGGRSLVYLV Trigger: GACCAGGTACACTAGACTCCTCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTGAGCTGTCTAGAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGACCTGTTTCTGCCCTTTaGACTTACCTGCCTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGPVSAL*TYLPSS Trigger: GGAGCTAGGCAGGTAAGTCCAAAGGGCAGAAACAGG...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 90 bp | GGTCTCTTGTACACACAGTACCCTGTGCATATGCTGGGGAGCCACTaGAGGTCTCATGGGAGGGGCACTGAGACCTTTATAGCAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GLLYTQYPVHMLGSH*RSHGRGTETFIASD Trigger: GTCACTTGCTATAAAGGTCTCAGTGCCCCTCCCATGAGACCTCAAGTGGCTCCCCAGCATATGCACAGGGTACTGTGTGTACAAGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGACTTCTGGACATGGCATaGACACCACACTCACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGLLDMA*TPHSQA Trigger: AGCTTGTGAGTGTGGTGTCCATGCCATGTCCAGAAG...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 90 bp | TGGATGGAGGAGAGGCTCCTAAGACTGCACCCAGCTGAAGAGCTATaGGTAACTGATGGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: WMEERLLRLHPAEEL*VTDGSVCVCVCVCV Trigger: CACACACACACACACACACACACACACAGAGCCATCAGTTACCAATAGCTCTTCAGCTGGGTGCAGTCTTAGGAGCCTCTCCTCCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTCTATAGGAGACAATTCATGTCTAGTACTGCAAAACTGGTCAAATGCCTGTCCACTGGCAGGCTaGCCGTACTCCAGTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: AGSIGDNSCLVLQNWSNACPLAG*PYSSGQ Trigger: CTGTCCACTGGAGTACGGGCAGCCTGCCAGTGGACA...GGCATTTGACCAGTTTTGCAGTACTAGACATGAATTGTCTCCTATAGAGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCCACACATCTGCTCATaGTCCAGGGGCTCTACATCA | + |
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Preference number: 2 (lower is better) Translates to: HTSWRDRSKCLLTPDMDVPHICS*SRGSTS Trigger: TGATGTAGAGCCCCTGGAGCATGAGCAGATGTGTGG...AACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCGGAGACCATCAAAATTaGATCACCAAAAGCCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGGDHQN*ITKSPF Trigger: GAACGGGCTTTTGGTGATGCAATTTTGATGGTCTCC...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGCATAGAGAATCAATCTaGAGCTGCCTGGAAACTTCC | + |
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Preference number: 2 (lower is better) Translates to: LSVSQSPSAIIAYLCLGRHRESI*SCLETS Trigger: GGAAGTTTCCAGGCAGCTCCAGATTGATTCTCTATG...CCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGACAGAAATACTTTCTCTaGCCTGATGATCTGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGQKYFL*PDDLKP Trigger: GGGTTTCAGATCATCAGGTCAGAGAAAGTATTTCTG...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAGCCCGTTCCAGCAGAGTCACAGCTCAGGAAACCTGGAGTGTATTAGATCACAGCAGCTGTGGTaGTCTGCAGACCCATATTCT | + |
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Preference number: 2 (lower is better) Translates to: TKSPFQQSHSSGNLECIRSQQLW*SADPYS Trigger: AGAATATGGGTCTGCAGATCACCACAGCTGCTGTGA...TCTAATACACTCCAGGTTTCCTGAGCTGTGACTCTGCTGGAACGGGCTTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCCTGGTCTCTCTCTCTTaGTGGATGACTTTTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGLVSLS*WMTFGK Trigger: TTTTCCAAAAGTCATCCATCAAGAGAGAGAGACCAG...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGTTTAAAACCTGTTTCTaGCCTTTGGACTTACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSVSQSPSAIIAYLCLGRFKTCF*PLDLPA Trigger: GGCAGGTAAGTCCAAAGGGCAGAAACAGGTTTTAAA...CCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTACTGTACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACAGCTGCCTTCTGGACATaGCATGGACACCACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: CYCTCLCLSTRDPNHCITAAFWT*HGHHTH Trigger: GTGAGTGTGGTGTCCATGCCATGTCCAGAAGGCAGC...TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCTCTACTGAACAACAATaGCATGCCTGTCAATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGSTEQQ*HACQCF Trigger: GAAGCATTGACAGGCATGCCATTGTTGTTCAGTAGA...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGCACACTGGTGGACAATaGTTACTAAATGAAGACCTA | + |
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Preference number: 2 (lower is better) Translates to: LSVSQSPSAIIAYLCLGRHTGGQ*LLNEDL Trigger: TAGGTCTTCATTTAGTAAGCATTGTCCACCAGTGTG...CCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCAAAGTTTTGCCATCGCTCTTaGTTGCCTGTCGTAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLERQEQMSVNPRYGRSKFCHRS*LPVVAR Trigger: TCTGGCTACGACAGGCAACCAAGAGCGATGGCAAAA...CTTTGAACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCAAAGGATTTTCTGTCTGAGTaGGCAGAGCTTTGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLERQEQMSVNPRYGRSKDFLSE*AELCCK Trigger: CTTGCAGCAAAGCTCTGCTCACTCAGACAGAAAATC...CTTTGAACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGTTATTAAATGAAACTCTCAGTGCCAGGTGTGGGGCACCCTTAAAAGTAAAGTGGTGGAAAGAATaGAGGCCTGAAGCCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PRLLNETLSARCGAPLKVKWWKE*RPEAWG Trigger: TCCCCAGGCTTCAGGCCTTCATTCTTTCCACCACTT...TACTTTTAAGGGTGCCCCACACCTGGCACTGAGAGTTTCATTTAATAACCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | GCCGGCTCTATAGGAGACAATTCATGTCTAGTACTGCAAAACTGGTCAAATGCCAGGCTCAGGGAGCACTaGAGAAGTGGTGGAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: AGSIGDNSCLVLQNWSNARLREH*RSGGKN Trigger: ATTCTTTCCACCACTTCTTCAGTGCTCCCTGAGCCT...GGCATTTGACCAGTTTTGCAGTACTAGACATGAATTGTCTCCTATAGAGCCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCTTTACTATTCAGCTCTaGACAGACCATTTCTATCAG | + |
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Preference number: 2 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGFTIQL*TDHFYQ Trigger: CTGATAGAAATGGTCTGTTCAGAGCTGAATAGTAAA...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTTGGCATGCCTGTCAATaGTTCCTAGTTGGATTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HTSWRDRSKCLLTPDMDVWHACQ*FLVGFE Trigger: CTCAAATCCAACTAGGAAGCATTGACAGGCATGCCA...AACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAGCCCGTTCCAGCAGAGTCACAGCTCAGGAAACCTGGAGTGTATTAGATGTTACAGTTTCTACTaGACAACAATGGCATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TKSPFQQSHSSGNLECIRCYSFY*TTMACL Trigger: CAGGCATGCCATTGTTGTTCAGTAGAAACTGTAACA...TCTAATACACTCCAGGTTTCCTGAGCTGTGACTCTGCTGGAACGGGCTTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | TGCTACTGTACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACAGCTCAGCAGACTCTCTaGCTCTTTGAGTTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CYCTCLCLSTRDPNHCITAQQTL*LFEFIS Trigger: AGAGATGAACTCAAAGAGGCAGAGAGTCTGCTGAGC...TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR-3UTR GCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATAGCTCTGCTGGTCTCTaGTTTGCCAGGAGGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYSSAGL*FARRLS Trigger: ACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCT...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CAA 90 bp | CGGGTTGTCAATGGGAATCTGCTTAATGACCTTGAACTAGGTTTCTaGTTTTCCCATATCCCAACTGTGCTTTCTGGTGCATCCTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: RVVNGNLLNDLELGF*FSHIPTVLSGASYH Trigger: GTGGTAGGATGCACCAGAAAGCACAGTTGGGATATGGGAAAACAAGAAACCTAGTTCAAGGTCATTAAGCAGATTCCCATTGACAACCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATTACTGTACTTGCCTCTaGCTGAGCACCAGGGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYYCTCL*LSTRDP Trigger: TGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTA...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | CACACCTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCACTGTACTATCCTTTaGAATCTCACTGAAGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: HTSWRDRSKCLLTPDMDVHCTIL*NLTEDE Trigger: CTCATCTTCAGTGAGATTCCAAAGGATAGTACAGTG...AACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATTTCAGACAGCTCTGCTaGTCTCTGCTTTGCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYFRQLC*SLLCQE Trigger: CTCCTGGCAAAGCAGAGACCAGCAGAGCTGTCTGAA...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CAA 90 bp | GATGACAAGCCCCTACTGTTGAAGGCACATTTACAACACATTTACTaGCAGGACATAGAGAATCAATCTGGAGCTGCCTGGAAACTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DDKPLLLKAHLQHIY*QDIENQSGAAWKLP Trigger: AGGAAGTTTCCAGGCAGCTCCAGATTGATTCTCTATGTCCTGCAAGTAAATGTGTTGTAAATGTGCCTTCAACAGTAGGGGCTTGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CAA 90 bp | TCCTCCCCTGCCTCTCTCCTTTCTGGTAGAAGGTTCAGCTCTGCATaGGCCACTTCAATTTCCTCTGTAAATAACTTGTTTCTTTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSPASLLSGRRFSSA*ATSISSVNNLFLFL Trigger: CAGAAAAAGAAACAAGTTATTTACAGAGGAAATTGAAGTGGCCAATGCAGAGCTGAACCTTCTACCAGAAAGGAGAGAGGCAGGGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR TCA 90 bp | CACACCTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTGACCTTTATAGCAAGTaGCATTTCTTAAGGCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: HTSWRDRSKCLLTPDMDVDLYSK*HFLRHF Trigger: AAAGTGCCTTAAGAAATGTCACTTGCTATAAAGGTC...AACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCAAAGTCTGAGTTCCAGCTCTaGTGTTTAAAACCTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLERQEQMSVNPRYGRSKSEFQL*CLKPVS Trigger: AGAAACAGGTTTTAAACAGCAGAGCTGGAACTCAGA...CTTTGAACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATGGCTTGCAAATACACTaGCAGTCTCTCCCATACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYGLQIH*QSLPYH Trigger: GTGGTATGGGAGAGACTGGCAGTGTATTTGCAAGCC...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR TCA 90 bp | GCCGGCTCTATAGGAGACAATTCATGTCTAGTACTGCAAAACTGGTCAAATGCCAGTGTAGAGACTAAGTaGCTGTTTACTATTCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGSIGDNSCLVLQNWSNASVETK*LFTIQL Trigger: GAGCTGAATAGTAAACAGTCACTTAGTCTCTACACT...GGCATTTGACCAGTTTTGCAGTACTAGACATGAATTGTCTCCTATAGAGCCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCGGCTCTATAGGAGACAATTCATGTCTAGTACTGCAAAACTGGTCAAATGCCCAAACCTACTACTGCTaGTTTGTTAAATGGCTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AGSIGDNSCLVLQNWSNAQTYYC*FVKWLG Trigger: ACCTAGCCATTTAACAAAGCAGCAGTAGTAGGTTTG...GGCATTTGACCAGTTTTGCAGTACTAGACATGAATTGTCTCCTATAGAGCCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | TTATTAAATGAAACTCTCAGTGCCAGGTGTGGGGCACCCTTAAAAGTAACTAGTAACTTCCTCCTTCACTaGACAGTTTTCAGCGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLNETLSARCGAPLKVTSNFLLH*TVFSAR Trigger: TCTGGCGCTGAAAACTGTCCAGTGAAGGAGGAAGTT...ACTAGTTACTTTTAAGGGTGCCCCACACCTGGCACTGAGAGTTTCATTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR TCA 90 bp | TGCTACTGTACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACAATTTTCTTTATAGTCTaGGTTCCAGCTCTGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CYCTCLCLSTRDPNHCITIFFIV*VPALLF Trigger: AAACAGCAGAGCTGGAACTCAGACTATAAAGAAAAT...TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR TCA 90 bp | TTATTAAATGAAACTCTCAGTGCCAGGTGTGGGGCACCCTTAAAAGTAACTAGTGATCTGAAACCCTGCTaGGATGAGGAAAGCCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLNETLSARCGAPLKVTSDLKPC*DEESHF Trigger: AAAATGGCTTTCCTCATCTCAGCAGGGTTTCAGATC...ACTAGTTACTTTTAAGGGTGCCCCACACCTGGCACTGAGAGTTTCATTTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCTCAATGCTCTATACCCTCATTTTCCTGTTGAAAACAAAGGCTGTGACTAGTGGACAGCACACATaGAGGAACATGAAGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLSMLYTLIFLLKTKAVTSGQHT*RNMKKA Trigger: TGCTTTCTTCATGTTCCTGCATGTGTGCTGTCCACT...AGTCACAGCCTTTGTTTTCAACAGGAAAATGAGGGTATAGAGCATTGAGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | TTATTAAATGAAACTCTCAGTGCCAGGTGTGGGGCACCCTTAAAAGTAACTAGTGTGGTGTGGAAGTCATaGGTTCTAAGGACAAACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LLNETLSARCGAPLKVTSVVWKS*VLRTNL Trigger: TAGGTTTGTCCTTAGAACCCATGACTTCCACACCAC...ACTAGTTACTTTTAAGGGTGCCCCACACCTGGCACTGAGAGTTTCATTTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CAA 90 bp | AGGTTCAGCTCTGCATTGGCCACTTCAATTTCCTCTGTAAATAACTaGTTTCTTTTTCTGACTGAGTCACTGAGTCCTACAAATTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RFSSALATSISSVNN*FLFLTESLSPTNSG Trigger: TCCAGAATTTGTAGGACTCAGTGACTCAGTCAGAAAAAGAAACAAGTTATTTACAGAGGAAATTGAAGTGGCCAATGCAGAGCTGAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATGCTCTTAACCCTGGTTaGAGAAGAAGTTCTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYALNPG*RRSSVF Trigger: AAAAACAGAACTTCTTCTCCAACCAGGGTTAAGAGC...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATGCTAGGTTTTCAGAGTaGTTTCTAAATACCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYARFSE*FLNTCV Trigger: AACACAGGTATTTAGAAAGCACTCTGAAAACCTAGC...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CCA 90 bp | TCAAACCAAATTCAAAGCCCACCTGAAACCTCGCCTTCTAACACAAAAACGTATTTTTTCTTTCTTTCTTaGGTCAGTCTGGCTTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SNQIQSPPETSPSNTKTYFFFLS*VSLACK Trigger: TTTGCAAGCCAGACTGACCCAAGAAAGAAAGAAAAA...ATACGTTTTTGTGTTAGAAGGCGAGGTTTCAGGTGGGCTTTGAATTTGGTTTGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTCCACTGGCAGGCTaGCCGTACTCCAGTGGACAGCACACATGCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCPLAG*PYSSGQHTCRN Trigger: GTTCCTGCATGTGTGCTGTCCACTGGAGTACGGGCAGCCTGCCAGTGGACACACACACACACACACACACAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | AGCTCTGCTGGTCTCTGCTTTGCCAGGAGGCTCAGTTaGTCTTCTAGACAGCTCAGCGTGTCTCAGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSAGLCFARRLS*SSRQLSVSQSP Trigger: GGGGCTCTGAGACACGCTGAGCTGTCTAGAAGACCAACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACTaGCAGGCTGCCCGTACTCCAGTGGACAGCACACAT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVH*QAARTPVDSTH Trigger: ATGTGTGCTGTCCACTGGAGTACGGGCAGCCTGCCAGTGGACACACACACACACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | AGGTCCAAGCCTCCTTCAGACAGCTCTGCTGGTCTCTaGTTTGCCAGGAGGCTCAGTTGGTCTTCTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RSKPPSDSSAGL*FARRLSWSSRQ Trigger: CTGTCTAGAAGACCAACTGAGCCTCCTGGCAAAGCAGAGACCAGCAGAGCTGTCTGAAGGAGGCTTGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGAGACCCATATTCTAGCTaGGATGGAGGAGAGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGDPYSS*DGGEAP Trigger: AGGAGCCTCTCCTCCATCCAAGCTAGAATATGGGTC...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTCCACTGGCAGGCTGCCCGTACTCCAGTaGACAGCACACATGCAGGAACATGAAGAAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VCVSTGRLPVLQ*TAHMQEHEESN Trigger: ATTGCTTTCTTCATGTTCCTGCATGTGTGCTGTCCACTGGAGTACGGGCAGCCTGCCAGTGGACACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | CTGGCAGGCTGCCCGTACTCCAGTGGACAGCACACATaGAGGAACATGAAGAAAGCAATGACTGGTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGCPYSSGQHT*RNMKKAMTGFR Trigger: TCTGAAACCAGTCATTGCTTTCTTCATGTTCCTGCATGTGTGCTGTCCACTGGAGTACGGGCAGCCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | GTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATaGTTGGGGAGGGAGGAGTCTAGTGTACCTGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSQSPSAIIAYL*LGREESSVPGQ Trigger: TTGACCAGGTACACTAGACTCCTCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | ATCAATCTGGAGCTGCCTGGAAACTTCCTCCTTCACTaGACAGTTTTCAGCGCCAGAAGGTGCCGAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: INLELPGNFLLH*TVFSARRCRAH Trigger: ATGTGCTCGGCACCTTCTGGCGCTGAAAACTGTCCAGTGAAGGAGGAAGTTTCCAGGCAGCTCCAGATTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCAGGAGACCATCAAAATaGCATCACCAAAAGCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGRRPSK*HHQKPV Trigger: AACGGGCTTTTGGTGATGCAATTTTGATGGTCTCCT...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR TCA 72 bp | ATGGACACCACACTCACAAGCTCACAGCAGCTGTGGTaGTCTGCAGACCCATATTCTAGCTTGGATGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MDTTLTSSQQLW*SADPYSSLDGG Trigger: TCCTCCATCCAAGCTAGAATATGGGTCTGCAGATCACCACAGCTGCTGTGAGCTTGTGAGTGTGGTGTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | AAAGCCCGTTCCAGCAGAGTCACAGCTCAGGAAACCTaGAGTGTATTAGACAACCTACAGGCAGCTCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: KARSSRVTAQET*SVLDNLQAAQQ Trigger: CTGTTGAGCTGCCTGTAGGTTGTCTAATACACTCCAGGTTTCCTGAGCTGTGACTCTGCTGGAACGGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCTCAATGCTCTATACCCTCATTTTCCTGTTGAAAACAAAGGCTGTGACTATGCTGGGGAGCCACTaGAGGTCTCATGGGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLSMLYTLIFLLKTKAVTMLGSH*RSHGRG Trigger: GCCCCTCCCATGAGACCTCAAGTGGCTCCCCAGCAT...AGTCACAGCCTTTGTTTTCAACAGGAAAATGAGGGTATAGAGCATTGAGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCTCTGGTCTCTCTCTCTaGATGGATGACTTTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGSGLSL*MDDFWK Trigger: TTTCCAAAAGTCATCCATCAAGAGAGAGAGACCAGA...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CACACCTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTATTGCTTATCTATGCTaGGGGAGGGAGGAGTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTSWRDRSKCLLTPDMDVIAYLC*GREESS Trigger: ACTAGACTCCTCCCTCCCCAAGCATAGATAAGCAAT...AACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | GCAAATACACTGCCAGTCTCTCCCATACCACACCACTaGCAGGGTTACAAACATATGCTACTGTACTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ANTLPVSPIPHH*QGYKHMLLYLP Trigger: AGGCAAGTACAGTAGCATATGTTTGTAACCCTGGCAGTGGTGTGGTATGGGAGAGACTGGCAGTGTATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | ATAGGGCCATGTATATATAATGCTGCCTTCTGGACATaGCATGGACACCACACTCACAAGCTCACAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IGPCIYNAAFWT*HGHHTHKLTAA Trigger: AGCTGCTGTGAGCTTGTGAGTGTGGTGTCCATGCCATGTCCAGAAGGCAGCATTATATATACATGGCCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | TGGGGAATAGGGCCATGTATATATAATGCTGCCTTCTaGACATGGCATGGACACCACACTCACAAGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: WGIGPCIYNAAF*TWHGHHTHKLT Trigger: TGTGAGCTTGTGAGTGTGGTGTCCATGCCATGTCCAGAAGGCAGCATTATATATACATGGCCCTATTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | TACTTGCAGGACATAGAGAATCAATCTGGAGCTGCCTaGAAACTTCCTCCTTCACTGGACAGTTTTCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: YLQDIENQSGAA*KLPPSLDSFQR Trigger: GCGCTGAAAACTGTCCAGTGAAGGAGGAAGTTTCCAGGCAGCTCCAGATTGATTCTCTATGTCCTGCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCACCACTTTCACTGAATaGTTTCAGAATACACATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGTTFTE*FQNTHW Trigger: CCAATGTGTATTCTGAAACAATTCAGTGAAAGTGGT...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCTACTGTACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACAGACAAGCCCCTACTGTaGAAGGCACATTTACAACAC | + |
|
Preference number: 3 (lower is better) Translates to: CYCTCLCLSTRDPNHCITDKPLL*KAHLQH Trigger: GTGTTGTAAATGTGCCTTCAACAGTAGGGGCTTGTC...TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | TTCCAGCTCTGCTGTTTAAAACCTGTTTCTGCCCTTTaGACTTACCTGCCTAGCTCCTACTTTTATGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FQLCCLKPVSAL*TYLPSSYFYEP Trigger: GGGCTCATAAAAGTAGGAGCTAGGCAGGTAAGTCCAAAGGGCAGAAACAGGTTTTAAACAGCAGAGCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | CGTATTCTTTGCATTTATGTTAGCAGCTTGGGACCTTaGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RILCIYVSSLGP*QLECVRFTQSN Trigger: GTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAGCTGCTAACATAAATGCAAAGAATACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGGAGAGACAGGAGCAAATGTCTGTTAACCCCAGATATGGACGTTCAAAGAGACTCTCTGCCTCTTaGAGTTCATCTCTTTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLERQEQMSVNPRYGRSKRLSAS*SSSLCS Trigger: TGAACAAAGAGATGAACTCAAAGAGGCAGAGAGTCT...CTTTGAACGTCCATATCTGGGGTTAACAGACATTTGCTCCTGTCTCTCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR TCA 72 bp | ACAATGGCATGCCTGTCAATGCTTCCTAGTTGGATTTaGGGCCGGCTCTATAGGAGACAATTCATGTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TMACLSMLPSWI*GRLYRRQFMSS Trigger: ACTAGACATGAATTGTCTCCTATAGAGCCGGCCTCAAATCCAACTAGGAAGCATTGACAGGCATGCCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | ACAGTTTCTACTGAACAACAATGGCATGCCTGTCAATaGTTCCTAGTTGGATTTGAGGCCGGCTCTATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVSTEQQWHACQ*FLVGFEAGSIG Trigger: TCCTATAGAGCCGGCCTCAAATCCAACTAGGAAGCATTGACAGGCATGCCATTGTTGTTCAGTAGAAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR GCA 72 bp | GCCAGGGTTACAAACATATGCTACTGTACTTGCCTCTaGCTGAGCACCAGGGATCCAAATCATTGTATAACA | + |
|
Preference number: 3 (lower is better) Translates to: ARVTNICYCTCL*LSTRDPNHCIT Trigger: TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCATATGTTTGTAACCCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
||
| 3UTR CCA 72 bp | TGCAAAACTGGTCAAATGCCTGTGGTGTGGAAGTCATaGGTTCTAAGGACAAACCTACTACTGCTGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CKTGQMPVVWKS*VLRTNLLLLLC Trigger: ACAAAGCAGCAGTAGTAGGTTTGTCCTTAGAACCCATGACTTCCACACCACAGGCATTTGACCAGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | ACAACACATTTACTTGCAGGACATAGAGAATCAATCTaGAGCTGCCTGGAAACTTCCTCCTTCACTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: TTHLLAGHRESI*SCLETSSFTGQ Trigger: CTGTCCAGTGAAGGAGGAAGTTTCCAGGCAGCTCCAGATTGATTCTCTATGTCCTGCAAGTAAATGTGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | AGGCCAGGCAGAAATACTTTCTCTGACCTGATGATCTaGAACCCTGCTGAGATGAGGAAAGCCATTTTAATG | + |
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Preference number: 3 (lower is better) Translates to: RPGRNTFSDLMI*NPAEMRKAILM Trigger: CATTAAAATGGCTTTCCTCATCTCAGCAGGGTTTCAGATCATCAGGTCAGAGAAAGTATTTCTGCCTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | GAGAAAGAAGATACAAAGGTAGTGGGGGAGTGGGGATaGGGACCTGGTATGATTAAGACACATCGTAAACAT | + |
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Preference number: 3 (lower is better) Translates to: EKEDTKVVGEWG*GPGMIKTHRKH Trigger: ATGTTTACGATGTGTCTTAATCATACCAGGTCCTCATCCCCACTCCCCCACTACCTTTGTATCTTCTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | GCTTCATGGGCTAGCTCAGCAGACTCTCTGCCTCTTTaGGTTCATCTCTTTGTTCATGGTTATCAGGTAATT | + |
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Preference number: 3 (lower is better) Translates to: ASWASSADSLPL*VHLFVHGYQVI Trigger: AATTACCTGATAACCATGAACAAAGAGATGAACTCAAAGAGGCAGAGAGTCTGCTGAGCTAGCCCATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | AGGTTTCTTGTTTTCCCATATCCCAACTGTGCTTTCTaGTGCATCCTACCACACACACCACTTTCACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RFLVFPYPNCAF*CILPHTPLSLN Trigger: ATTCAGTGAAAGTGGTGTGTGTGGTAGGATGCACCAGAAAGCACAGTTGGGATATGGGAAAACAAGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | TTTCCAGGGTGCTTTTGTCTTTCGTTTTGGCATGTATaGGGTGTTCTCTTGGTCTTATCCACAGTGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: FPGCFCLSFWHV*GVLLVLSTVKL Trigger: CAGTTTCACTGTGGATAAGACCAAGAGAACACCTCATACATGCCAAAACGAAAGACAAAAGCACCCTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 72 bp | TTTCTTGTTTTCCCATATCCCAACTGTGCTTTCTGGTaGATCCTACCACACACACCACTTTCACTGAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLVFPYPNCAFW*ILPHTPLSLNC Trigger: ACAATTCAGTGAAAGTGGTGTGTGTGGTAGGATGCACCAGAAAGCACAGTTGGGATATGGGAAAACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | TCTATAGGAGACAATTCATGTCTAGTACTGCAAAACTaGTCAAATGCCTGTGGTGTGGAAGTCATGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SIGDNSCLVLQN*SNACGVEVMGS Trigger: AGAACCCATGACTTCCACACCACAGGCATTTGACCAGTTTTGCAGTACTAGACATGAATTGTCTCCTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | CTGACTGAGTCACTGAGTCCTACAAATTCTGGATATTaGTGGCTTTCAGGTTATGTTCATTGCAAGAAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: LTESLSPTNSGY*WLSGYVHCKKA Trigger: CGCTTTCTTGCAATGAACATAACCTGAAAGCCACCAATATCCAGAATTTGTAGGACTCAGTGACTCAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | AGGCATCCTACACACTGGTGGACAATGCTTACTAAATaGAGACCTAGGTTATTAAATGAAACTCTCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RHPTHWWTMLTK*RPRLLNETLSA Trigger: GGCACTGAGAGTTTCATTTAATAACCTAGGTCTTCATTTAGTAAGCATTGTCCACCAGTGTGTAGGATGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | CTTTCTGGTGCATCCTACCACACACACCACTTTCACTaGATTGTTTCAGAATACACATTGGAGAGAACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSGASYHTHHFH*IVSEYTLERTH Trigger: ATGAGTTCTCTCCAATGTGTATTCTGAAACAATTCAGTGAAAGTGGTGTGTGTGGTAGGATGCACCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 72 bp | AGCAGAAACATGGAATTGCTAGTGTTTCGTATTCTTTaGATTTATGTTAGCAGCTTGGGACCTTGGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRNMELLVFRIL*IYVSSLGPWQL Trigger: CAACTGCCAAGGTCCCAAGCTGCTAACATAAATGCAAAGAATACGAAACACTAGCAATTCCATGTTTCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | ACTGAGTCACTGAGTCCTACAAATTCTGGATATTGGTaGCTTTCAGGTTATGTTCATTGCAAGAAAGCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TESLSPTNSGYW*LSGYVHCKKAL Trigger: TAGCGCTTTCTTGCAATGAACATAACCTGAAAGCCACCAATATCCAGAATTTGTAGGACTCAGTGACTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR TCA 72 bp | TCCAGTCTCTACTTTGATGGAATTTTCTTTATAGTCTaGGTTCCAGCTCTGCTGTTTAAAACCTGTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSLYFDGIFFIV*VPALLFKTCFC Trigger: GCAGAAACAGGTTTTAAACAGCAGAGCTGGAACTCAGACTATAAAGAAAATTCCATCAAAGTAGAGACTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CCA 72 bp | ACAGCACACATGCAGGAACATGAAGAAAGCAATGACTaGTTTCAGAAGGTTATGAAAAGAGAAAGAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: TAHMQEHEESND*FQKVMKRERRY Trigger: GTATCTTCTTTCTCTTTTCATAACCTTCTGAAACCAGTCATTGCTTTCTTCATGTTCCTGCATGTGTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR GCA 72 bp | AATTCTGGATATTGGTGGCTTTCAGGTTATGTTCATTaGAAGAAAGCGCTATTGCTTTATTTGATGTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSGYWWLSGYVH*KKALLLYLMCN Trigger: GTTGCACATCAAATAAAGCAATAGCGCTTTCTTGCAATGAACATAACCTGAAAGCCACCAATATCCAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | GACAGCTCAGCGTGTCTCAGAGCCCCTCGGCAATCATaGCTTATCTATGCTTGGGGAGGGAGGAGTCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSSACLRAPRQS*LIYAWGGRSLV Trigger: CACTAGACTCCTCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTGAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | GAGAGGCTCCTAAGACTGCACCCAGCTGAAGAGCTATaGGTAACTGATGGCTCTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERLLRLHPAEEL*VTDGSVCVCVC Trigger: ACACACACACACACACACAGAGCCATCAGTTACCAATAGCTCTTCAGCTGGGTGCAGTCTTAGGAGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR TCA 90 bp | CAGCGTGTCTCAGAGCCCCTCGGCAATCATTGCTTATCTATGCTTGGGGAGGGACTTCAAACTTATACTTaGTGCCTTTTTCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRVSEPLGNHCLSMLGEGLQTYT*CLFPPG Trigger: TCCAGGAGGAAAAAGGCATCAAGTATAAGTTTGAAG...TCCCTCCCCAAGCATAGATAAGCAATGATTGCCGAGGGGCTCTGAGACACGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR CCA 90 bp | TGCTACTGTACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATTGTATAACAATGCCTTTTTCCTCCTaGACCTCAGAGAGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYCTCLCLSTRDPNHCITMPFSS*TSERTP Trigger: AGGCGTCCTCTCTGAGGTCCAGGAGGAAAAAGGCAT...TGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTACAGTAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | TACTTGCCTCTGCCTGAGCACCAGGGATCCAAATCATaGTATAACACACCTCCTGGAGAGACAGGAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLPEHQGSKS*YNTPPGETGAN Trigger: ATTTGCTCCTGTCTCTCCAGGAGGTGTGTTATACAATGATTTGGATCCCTGGTGCTCAGGCAGAGGCAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | TATTCAGCTCTGAACAGACCATTTCTATCAGTAGACTaGTCTAAGGCTCAGGGAGCACTGAAGAAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSALNRPFLSVD*SKAQGALKKWW Trigger: CCACCACTTCTTCAGTGCTCCCTGAGCCTTAGACAAGTCTACTGATAGAAATGGTCTGTTCAGAGCTGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | CTAGTGTTTCGTATTCTTTGCATTTATGTTAGCAGCTaGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LVFRILCIYVSS*GPWQLECVRFT Trigger: TGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAGCTGCTAACATAAATGCAAAGAATACGAAACACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | GCCTCTCTCCTTTCTGGTAGAAGGTTCAGCTCTGCATaGGCCACTTCAATTTCCTCTGTAAATAACTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLSGRRFSSA*ATSISSVNNLF Trigger: AAACAAGTTATTTACAGAGGAAATTGAAGTGGCCAATGCAGAGCTGAACCTTCTACCAGAAAGGAGAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR CCA 90 bp | CCTAGGTTATTAAATGAAACTCTCAGTGCCAGGTGTGGGGCACCCTTAAAAGTAGTTGTGGTCATTCTTTaGAAGTACTTGAACTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRLLNETLSARCGAPLKVVVVIL*KYLNSF Trigger: GAACGAGTTCAAGTACTTCCAAAGAATGACCACAAC...TACTTTTAAGGGTGCCCCACACCTGGCACTGAGAGTTTCATTTAATAACCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | CTGGTGCATCCTACCACACACACCACTTTCACTGAATaGTTTCAGAATACACATTGGAGAGAACTCATACTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHPTTHTTFTE*FQNTHWRELIL Trigger: TAGTATGAGTTCTCTCCAATGTGTATTCTGAAACAATTCAGTGAAAGTGGTGTGTGTGGTAGGATGCACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | AATGGGAATCTGCTTAATGACCTTGAACTAGGTTTCTaGTTTTCCCATATCCCAACTGTGCTTTCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGNLLNDLELGF*FSHIPTVLSGA Trigger: TGCACCAGAAAGCACAGTTGGGATATGGGAAAACAAGAAACCTAGTTCAAGGTCATTAAGCAGATTCCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| 3UTR CAA 72 bp | TGGCTTTCAGGTTATGTTCATTGCAAGAAAGCGCTATaGCTTTATTTGATGTGCAACTGTTCTATAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSGYVHCKKAL*LYLMCNCSIEL Trigger: CAATTCTATAGAACAGTTGCACATCAAATAAAGCAATAGCGCTTTCTTGCAATGAACATAACCTGAAAGCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR CAA 90 bp | CTTGGGACCTTGGCAGTTGGAGTGTGTCCGGTTTACACAGAGCAACAAGCTGGCGGTTGTGGTCATTCTTaGGAAGTACTTGAACTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGTLAVGVCPVYTEQQAGGCGHS*EVLELV Trigger: AACGAGTTCAAGTACTTCCAAAGAATGACCACAACC...GCCAGCTTGTTGCTCTGTGTAAACCGGACACACTCCAACTGCCAAGGTCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR CAA 90 bp | ACCAAAAGCCCGTTCCAGCAGAGTCACAGCTCAGGAAACCTGGAGTGTATTAGAATTCTTTGGAAGTACTaGAACTCGTTCCTGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TKSPFQQSHSSGNLECIRILWKY*NSFLSG Trigger: TCCGCTCAGGAACGAGTTCAAGTACTTCCAAAGAAT...TCTAATACACTCCAGGTTTCCTGAGCTGTGACTCTGCTGGAACGGGCTTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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| CDS-3UTR CAA 90 bp | TTCCTCTCAATGCTCTATACCCTCATTTTCCTGTTGAAAACAAAGGCTGTGACTACTTCAAACTTATACTaGATGCCTTTTTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSMLYTLIFLLKTKAVTTSNLY*MPFSSW Trigger: CCAGGAGGAAAAAGGCATCAAGTATAAGTTTGAAGT...AGTCACAGCCTTTGTTTTCAACAGGAAAATGAGGGTATAGAGCATTGAGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022218.6 |
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