Pregenerated sensors for DHDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011382Ensembl transcript IDs: ENSMUST00000011526.7
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTaGCCCTCTGCCCAGCCCAGGGCTGTCTCTGTTCTGGTCAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: SPLVHCACSEDPTQA*PSAQPRAVSVLVRG Trigger: ACCTCTGACCAGAACAGAGACAGCCCTGGGCTGGGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 90 bp | GGCAGGGTCCCAAGGACTCCATGCTCTGAGGACTTGACTCTCTTATaGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GRVPRTPCSEDLTLL*SFSLLVALEVTTLP Trigger: GGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGGGACCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR GCA 90 bp | GGTATGACTGAGGTTCCCCTTGGCTCCCCATCACCCAGGTACCCTTaGACCAGGAAGCTCTTTCATTCATTCTTTCCAAAGAAGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GMTEVPLGSPSPRYP*TRKLFHSFFPKKQP Trigger: AGGCTGCTTCTTTGGAAAGAATGAATGAAAGAGCTTCCTGGTGCAAGGGTACCTGGGTGATGGGGAGCCAAGGGGAACCTCAGTCATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | AACCTGTTTGTCCTAGAAAGAAGCTTTGGTGTCTGTAGACTCCCCTaGCTCCACACCCTGACTCATCAAAGCTGGCTCCCAACACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: NLFVLERSFGVCRLP*LHTLTHQSWLPTPR Trigger: TCTGGGTGTTGGGAGCCAGCTTTGATGAGTCAGGGTGTGGAGTCAGGGGAGTCTACAGACACCAAAGCTTCTTTCTAGGACAAACAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 90 bp | GAAGAATGTAGTTTAGGCTCTGTGACCCACACACTTGCTCTGCTGTaGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAAT | + |
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Preference number: 1 (lower is better) Translates to: EECSLGSVTHTLALL*ALTQAVNSSTHIHN Trigger: ATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAGAGCAAGTGTGTGGGTCACAGAGCCTAAACTACATTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNGI*CPLLVCLKTATVYS Trigger: TGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 90 bp | CAGTTGTTCTGGCTCAAACTCCTTTCTAAGCTGACTGATCCAGTCTaGCTTCTCTCAGCCTCTAACTGGGTTGTTCTGCTTGGCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: QLFWLKLLSKLTDPV*LLSASNWVVLLGLK Trigger: TTTGAGGCCAAGCAGAACAACCCAGTTAGAGGCTGAGAGAAGCCAGACTGGATCAGTCAGCTTAGAAAGGAGTTTGAGCCAGAACAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCACCTTTAACAAGATCTaGCTCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTTFNKI*LPLLVCLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTAAAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR GCA 90 bp | GTTATTTCTCCTCTGGCTTCTTCTGTGTCTCACTGGCAAATCTCCTaGCTCAGATTCTTTCCCCGAGTTCTTAACTCTCCCCAGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: VISPLASSVSHWQIS*LRFFPRVLNSPQKP Trigger: AGGTTTCTGGGGAGAGTTAAGAACTCGGGGAAAGAATCTGAGGCAGGAGATTTGCCAGTGAGACACAGAAGAAGCCAGAGGAGAAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 90 bp | CTTTCTAAGCTGACTGATCCAGTCTGGCTTCTCTCAGCCTCTAACTaGGTTGTTCTGCTTGGCCTCAAACTAACTCTGGCAATGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LSKLTDPVWLLSASN*VVLLGLKLTLAMCS Trigger: AGAACACATTGCCAGAGTTAGTTTGAGGCCAAGCAGAACAACCCAGTTAGAGGCTGAGAGAAGCCAGACTGGATCAGTCAGCTTAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 90 bp | GTAACGTGGCTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCTCACTaGCAAATCTCCTGCCTCAGATTCTTTCCCCGAGTTCTTAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VTWLVISPLASSVSH*QISCLRFFPRVLNS Trigger: AGAGTTAAGAACTCGGGGAAAGAATCTGAGGCAGGAGATTTGCCAGTGAGACACAGAAGAAGCCAGAGGAGAAATAACAAGCCACGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | TTTCTTTCTGAACTCAGTTGTTCTGGCTCAAACTCCTTTCTAAGCTaGCTGATCCAGTCTGGCTTCTCTCAGCCTCTAACTGGGTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: FLSELSCSGSNSFLS*LIQSGFSQPLTGLF Trigger: GAACAACCCAGTTAGAGGCTGAGAGAAGCCAGACTGGATCAGTCAGCTTAGAAAGGAGTTTGAGCCAGAACAACTGAGTTCAGAAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | GTACACTTAGTATCTCTGTTTCCTGATAAGGAGACATCAGCCAGTTaGGAGGACATTGAAGAATGTAGTTTAGGCTCTGTGACCCACACA | + |
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Preference number: 1 (lower is better) Translates to: VHLVSLFPDKETSAS*EDIEECSLGSVTHT Trigger: TGTGTGGGTCACAGAGCCTAAACTACATTCTTCAATGTCCTCTCAACTGGCTGATGTCTCCTTATCAGGAAACAGAGATACTAAGTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR GCA 90 bp | GTAAGCCAGACTGATGTTCTCTTTAGAACAACCAGTGCTCTTAACTaGCGAGATGTCTTTCCAGCCCAAAGTTCTGTATTTTTGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: VSQTDVLFRTTSALN*RDVFPAQSSVFLLK Trigger: CTTTAACAAAAATACAGAACTTTGGGCTGGAAAGACATCTCGGCAGTTAAGAGCACTGGTTGTTCTAAAGAGAACATCAGTCTGGCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | TCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTaGAGACAGCTACAGTGTACTCACATACATAAAATAAATGAATCT | + |
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Preference number: 1 (lower is better) Translates to: SQPSVMGSDALFWCV*RQLQCTHIHKINES Trigger: AGATTCATTTATTTTATGTATGTGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 90 bp | CCAGCCCAAAGTTCTGTATTTTTGTTAAAGCTGAAACTATCCCATTaGAGCACTTCCAAGCAGGATGTAGTACACTTAGTATCTCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PAQSSVFLLKLKLSH*STSKQDVVHLVSLF Trigger: AAACAGAGATACTAAGTGTACTACATCCTGCTTGGAAGTGCTTCAATGGGATAGTTTCAGCTTTAACAAAAATACAGAACTTTGGGCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGACCAGGCTGGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTTGTGTGATAAATCACCCTGCCTCTaGCCTGTCCCCGAACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VDQAGADLHLPLGLKLCDKSPCL*PVPEPR Trigger: CCTTGGTTCGGGGACAGGTCAGAGGCAGGGTGATTT...ATCACACAACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGCCTGGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | CCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCCCCTATCGCCCTGCCTTaGTCTCTTAAAGCAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLVHCACSEDPTQACPSAPIALP*SLKAVS Trigger: AGAGACTGCTTTAAGAGAGCAAGGCAGGGCGATAGG...GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | CCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCCCTTCTTCAAAGAGTTTaGTGGGGGATATGGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLVHCACSEDPTQACPSALLQRV*WGIWGK Trigger: TTTCCCCCATATCCCCCAGCAAACTCTTTGAAGAAG...GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 90 bp | CTCCTTCTCACTCCCTGGCTTGTTCTGTCTTCCCCTGAGTCTAGCTaGTTCTCTGTTCAACCTGTCTCTGTAGCAGTAGCCTGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLLTPWLVLSSPESS*FSVQPVSVAVACLL Trigger: GAGGAGGCAGGCTACTGCTACAGAGACAGGTTGAACAGAGAACAAGCTAGACTCAGGGGAAGACAGAACAAGCCAGGGAGTGAGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGCCTGAATCTATTGCCTaGCTGTGGATCCCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LLWALTQAVNSSTHIHNLPESIA*LWIPFP Trigger: GGGGAATGGGATCCACAGGCAGGCAATAGATTCAGG...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGCTCTCAGCCTCTAACTaGGTTGTTCTGCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLWALTQAVNSSTHIHNLLSASN*VVLLGL Trigger: GAGGCCAAGCAGAACAACCCAGTTAGAGGCTGAGAG...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGACTCCATATGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTTTCCTGACTCCACACCCTaGCTCATCAAAGCTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AVTPYAVCVCVCVCVSVFPDSTP*LIKAGS Trigger: GGAGCCAGCTTTGATGAGTCAGGGTGTGGAGTCAGG...AAACACACTCACACACACACACACACACACACACACAGCATATGGAGTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGATGCACTTAGTCCTGCAGTGACTCCATATGCTGTGTGTGTGTGTGTGTGTGTCTGTAGACTCCCCTaGCTCCACACCCTGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: EDALSPAVTPYAVCVCVCVCRLP*LHTLTH Trigger: ATGAGTCAGGGTGTGGAGTCAGGGGAGTCTACAGAC...ACACACACACACACACACAGCATATGGAGTCACTGCAGGACTAAGTGCATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 90 bp | ACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGTTTGTTTTTaGAGACACGAGACAGGGTTTCTCTGTGCGGCCCTGGCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGCELQHSHPQFVCF*RHETGFLCAALAVQ Trigger: CTGGACAGCCAGGGCCGCACAGAGAAACCCTGTCTCGTGTCTCAAAAAACAAACAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCCTTGCTCTCTTAAAGCAGTCTCTCTCTCTCTCCTCTCTGCTCTCATGGTTCATCTGGCTTCAGTaGGAGAGGATGCACTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: PCLALLKQSLSLSSLLSWFIWLQ*ERMHLV Trigger: GACTAAGTGCATCCTCTCCCACTGAAGCCAGATGAA...CCATGAGAGCAGAGAGGAGAGAGAGAGAGACTGCTTTAAGAGAGCAAGGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGATGTCAGGGGCTGTGTaGGAACAAGAAGCAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLWALTQAVNSSTHIHNLMSGAV*EQEATL Trigger: CAAAGTTGCTTCTTGTTCCCACACAGCCCCTGACAT...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAACAAAGGCAAGATGACTTTCAGGAGCCCAGATGTCAGGGGCTGTGTGGGATTCTTCCAGAGGTTCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: ENKGKMTFRSPDVRGCVGFFQRF*VQIPAT Trigger: GGTTGCTGGGATTTGAACTCAGAACCTCTGGAAGAA...TCCCACACAGCCCCTGACATCTGGGCTCCTGAAAGTCATCTTGCCTTTGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTTATGGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTTGCCCATAGAACACGTGCTGATTTaGAGCAGCAGCAGCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LLWSFSLLVALEVTTLPIEHVLI*SSSSSN Trigger: GTTGCTGCTGCTGCTGCTGCAAATCAGCACGTGTTC...TATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | GATGGCTCAGTGGTTAGGAGCACTGACTGTTCTTCCAGAGGTTCTGAGTTCAAACTGGGCTGTTTCATCTaGCTTCAGTGGGAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: DGSVVRSTDCSSRGSEFKLGCFI*LQWERM Trigger: CATCCTCTCCCACTGAAGCCAGATGAAACAGCCCAG...TTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCTCCTAACCACTGAGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 90 bp | TCTGGCAATGTGTTCTTATCTTCTGGCTCCTTCTCACTCCCTGGCTaGTTCTGTCTTCCCCTGAGTCTAGCTTGTTCTCTGTTCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: SGNVFLSSGSFSLPG*FCLPLSLACSLFNL Trigger: CAGGTTGAACAGAGAACAAGCTAGACTCAGGGGAAGACAGAACAAGCCAGGGAGTGAGAAGGAGCCAGAAGATAAGAACACATTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGTTTGTTATCCCAGCAACCACATaGTGGCTCACAACCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: WALTQAVNSSTHIHNLFVIPATT*WLTTTF Trigger: AAAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT...AACAAACAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGTTTGTTGGAGAGATGGCTCAGTaGTTAGGAGCACTGACTGTT | + |
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Preference number: 2 (lower is better) Translates to: WALTQAVNSSTHIHNLFVGEMAQ*LGALTV Trigger: AACAGTCAGTGCTCCTAACCACTGAGCCATCTCTCC...AACAAACAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGATGCACTTAGTCCTGCAGTGACTCCATATGCTGTGTGTGTGTGTGTGTGTACAACTCCAAAGCAATaGGAGTCAGGTTACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: EDALSPAVTPYAVCVCVCTTPKQ*ESGYRG Trigger: ACCTCTGTAACCTGACTCTCATTGCTTTGGAGTTGT...ACACACACACACACACACAGCATATGGAGTCACTGCAGGACTAAGTGCATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTTATGGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTTGCCCATAATCTATGTTCTGGGCTaGAGAGATGGCTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLWSFSLLVALEVTTLPIIYVLG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCCAGAACATAGAT...TATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGTACCAAAATCTGGCCTaGCTACTCAGAAACCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMYQNLA*LLRNQH Trigger: ATGCTGGTTTCTGAGTAGGCAGGCCAGATTTTGGTA...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | AAATCTATGTTCTGTAACGTGGCTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCTCTGTAGCAGTAGCCTaGCTCCTCCTCCTTCCTATC | + |
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Preference number: 2 (lower is better) Translates to: KSMFCNVACYFSSGFFCVSVAVA*LLLLPI Trigger: GATAGGAAGGAGGAGGAGGCAGGCTACTGCTACAGA...GACACAGAAGAAGCCAGAGGAGAAATAACAAGCCACGTTACAGAACATAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | AAATCTATGTTCTGTAACGTGGCTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCCTCCTTCTCACTCCCTaGCTTGTTCTGTCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KSMFCNVACYFSSGFFCVLLLTP*LVLSSP Trigger: AGGGGAAGACAGAACAAGCCAGGGAGTGAGAAGGAG...GACACAGAAGAAGCCAGAGGAGAAATAACAAGCCACGTTACAGAACATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTTATGGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTTGCCCATATTTGAGCATTGCTGTTaGAGCAGATTAAGGATTCGG | + |
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Preference number: 2 (lower is better) Translates to: LLWSFSLLVALEVTTLPIFEHCC*SRLRIR Trigger: CCGAATCCTTAATCTGCTCCAACAGCAATGCTCAAA...TATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR TCA 90 bp | ACTAACACTTTTATATTAATCTATGTTCTGGGCTGGAGAGATGGCTCAGTGGTTCACTTAGTCCTGCAGTaGCTCCATATGCTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TNTFILIYVLGWRDGSVVHLVLQ*LHMLCV Trigger: CACACACAGCATATGGAGTCACTGCAGGACTAAGTG...AACCACTGAGCCATCTCTCCAGCCCAGAACATAGATTAATATAAAAGTGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | GGCTCAGTGGTTAGGAGCACTGACTGTTCTTCCAGAGGTTCTGAGTTCAAATCCTTCATAATCACAAATTaGAGCTTGCCAGTCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSVVRSTDCSSRGSEFKSFIITN*SLPVKE Trigger: TTCTTTGACTGGCAAGCTGCAATTTGTGATTATGAA...GGATTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCTCCTAACCACTGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGCATCACTTTCAAACATaGGTGCTTCCTTTTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMHHFQT*VLPFTN Trigger: GTTTGTAAAAGGAAGCACCCATGTTTGAAAGTGATG...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTTATGGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTTGCCCATAACTTTCAAACATGGGTaGTTCCTTTTACAAACTAAC | + |
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Preference number: 2 (lower is better) Translates to: LLWSFSLLVALEVTTLPITFKHG*FLLQTN Trigger: GTTAGTTTGTAAAAGGAAGCACCCATGTTTGAAAGT...TATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAACACTTTTATATTAATCTATGTTCTGGGCTGGAGAGATGGCTCAGTGGTTAACAATACCAAAATCTaGCCTGCCTACTCAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: TNTFILIYVLGWRDGSVVNNTKI*PAYSET Trigger: GGTTTCTGAGTAGGCAGGCCAGATTTTGGTATTGTT...AACCACTGAGCCATCTCTCCAGCCCAGAACATAGATTAATATAAAAGTGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 90 bp | TCCAGCCCAAAGTTCTGTATTTTTGTTAAAGCTGAAACTATCCCATaGAAGCACTTCCAAGCAGGATGTAGTACACTTAGTATCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SSPKFCIFVKAETIP*KHFQAGCSTLSISV Trigger: AACAGAGATACTAAGTGTACTACATCCTGCTTGGAAGTGCTTCAATGGGATAGTTTCAGCTTTAACAAAAATACAGAACTTTGGGCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CCA 72 bp | CCCTGGCTGTCCAGGGACTTCCTCTGTAGACCAGGCTaGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PWLSRDFLCRPG*RRPPPASGIKV Trigger: AACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGCCTGGTCTACAGAGGAAGTCCCTGGACAGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR TCA 72 bp | GAATCCTGTGTGAGGAGGAGTGTTGCATGGTATGACTaGGGTTCCCCTTGGCTCCCCATCACCCAGGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: ESCVRRSVAWYD*GSPWLPITQVP Trigger: GGGTACCTGGGTGATGGGGAGCCAAGGGGAACCTCAGTCATACCATGCAACACTCCTCCTCACACAGGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | AATCTGTACATCACCACTAGTGCACTGTGCATGCTCTaGAGACCCTACCCAAGCCTGCCCCTCTGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NLYITTSALCML*RPYPSLPLCPA Trigger: GGCTGGGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGGTGATGTACAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | GCCTGGGAGAGGCAGGGTCCCAAGGACTCCATGCTCTaGGGACTTGACTCTCTTATGGAGTTTCTCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AWERQGPKDSML*GLDSLMEFLSA Trigger: AGCAGAGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGGGACCCTGCCTCTCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR GCA 72 bp | GGTGTGCCTGGGAGAGGCAGGGTCCCAAGGACTCCATaGTCTGAGGACTTGACTCTCTTATGGAGTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVPGRGRVPRTP*SEDLTLLWSFS Trigger: AGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGGGACCCTGCCTCTCCCAGGCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR GCA 72 bp | TGGCTAATCTGTACATCACCACTAGTGCACTGTGCATaGTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLICTSPLVHCA*SEDPTQACPSA Trigger: GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGGTGATGTACAGATTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGCTCTGCTTGTTGCCCTaGAGGTCACCACTTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLWALTQAVNSSTHIHNLLCLLP*RSPLCP Trigger: TGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAG...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | GAGGCAGGGTCCCAAGGACTCCATGCTCTGAGGACTTaGCTCTCTTATGGAGTTTCTCTCTGCTTGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAGSQGLHALRT*LSYGVSLCLLP Trigger: GGGCAACAAGCAGAGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGGGACCCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | AGCTGCCGTTGTGGGTTTCTCCCCAAGAATCCTGTGTaGGGAGGAGTGTTGCATGGTATGACTGAGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SCRCGFLPKNPV*GGVLHGMTEVP Trigger: GGGAACCTCAGTCATACCATGCAACACTCCTCCTCACACAGGATTCTTGGGGAGAAACCCACAACGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR GCA 72 bp | TTGTTCTCTGTTCAACCTGTCTCTGTAGCAGTAGCCTaGCTCCTCCTCCTTCCTATCGCCCTGCCTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFSVQPVSVAVA*LLLLPIALPCS Trigger: AGAGCAAGGCAGGGCGATAGGAAGGAGGAGGAGGCAGGCTACTGCTACAGAGACAGGTTGAACAGAGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | TGGCTCCCAACACCCAGAAAGGGAGAGAACACGTGCTaGTTTGCAGCAGCAGCAGCAGCAACAACAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: WLPTPRKGENTC*FAAAAAATTTT Trigger: TGTTGTTGTTGTTGCTGCTGCTGCTGCTGCAAATCAGCACGTGTTCTCTCCCTTTCTGGGTGTTGGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | GTCCTAGAAAGAAGCTTTGGTGTCTGTAGACTCCCCTaGCTCCACACCCTGACTCATCAAAGCTGGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLERSFGVCRLP*LHTLTHQSWLP Trigger: TGGGAGCCAGCTTTGATGAGTCAGGGTGTGGAGTCAGGGGAGTCTACAGACACCAAAGCTTCTTTCTAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR GCA 72 bp | GAGGTTCCCCTTGGCTCCCCATCACCCAGGTACCCTTaGACCAGGAAGCTCTTTCATTCATTCTTTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVPLGSPSPRYP*TRKLFHSFFPK Trigger: CTTTGGAAAGAATGAATGAAAGAGCTTCCTGGTGCAAGGGTACCTGGGTGATGGGGAGCCAAGGGGAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CCA 72 bp | AATCTATTGCCTGCCTGTGGATCCCATTCCCCTAACTaGGCTGTTTCATCTGGCTTCAGTGGGAGAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: NLLPACGSHSPN*AVSSGFSGRGC Trigger: GCATCCTCTCCCACTGAAGCCAGATGAAACAGCCCAGTTAGGGGAATGGGATCCACAGGCAGGCAATAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGGTTTCTCTCTGCTTGTaGCCCTTGAGGTCACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LLWALTQAVNSSTHIHNLVSLCL*PLRSPL Trigger: AAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAAC...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | TGGCTTCAGTGGGAGAGGATGCACTTAGTCCTGCAGTaGCTCCATATGCTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WLQWERMHLVLQ*LHMLCVCVCVC Trigger: ACACACACACACACACACACACAGCATATGGAGTCACTGCAGGACTAAGTGCATCCTCTCCCACTGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR GCA 72 bp | CCTCTGGCTTCTTCTGTGTCTCACTGGCAAATCTCCTaGCTCAGATTCTTTCCCCGAGTTCTTAACTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLASSVSHWQIS*LRFFPRVLNSP Trigger: GGGAGAGTTAAGAACTCGGGGAAAGAATCTGAGGCAGGAGATTTGCCAGTGAGACACAGAAGAAGCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CCA 72 bp | CTGACTGATCCAGTCTGGCTTCTCTCAGCCTCTAACTaGGTTGTTCTGCTTGGCCTCAAACTAACTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTDPVWLLSASN*VVLLGLKLTLA Trigger: TGCCAGAGTTAGTTTGAGGCCAAGCAGAACAACCCAGTTAGAGGCTGAGAGAAGCCAGACTGGATCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CCA 72 bp | CCAAGGACTCCATGCTCTGAGGACTTGACTCTCTTATaGAGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PRTPCSEDLTLL*SFSLLVALEVT Trigger: GGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGTTTGTTAAGCAGGAGGGAAGGTaGCTTGCCACACACATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WALTQAVNSSTHIHNLFVKQEGR*LATHIC Trigger: ACAGATGTGTGTGGCAAGCAACCTTCCCTCCTGCTT...AACAAACAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCAGGGGGAAAAATAAAGTaGTTGGAGCCTAGCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: VRAPDCSSEGPEFKSQQPGGKIK*LEPSFI Trigger: GATGAAGCTAGGCTCCAACAACTTTATTTTTCCCCC...TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCCTTGCTCTCTTAAAGCAGTCTCTCTCTCTCTCCTCTCTGCTCTCATGGATCACAAATTGCAGCTaGCCAGTCAAAGAACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCLALLKQSLSLSSLLSWITNCS*PVKELA Trigger: AGCCAGTTCTTTGACTGGCAAGCTGCAATTTGTGAT...CCATGAGAGCAGAGAGGAGAGAGAGAGAGACTGCTTTAAGAGAGCAAGGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CCA 72 bp | AGTCTCTCTCTCTCTCCTCTCTGCTCTCATGGGAGCTaGGCACATCCTAGTCTGTCAAATCTGATTTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSPLCSHGS*AHPSLSNLICC Trigger: GCAACAAATCAGATTTGACAGACTAGGATGTGCCCAGCTCCCATGAGAGCAGAGAGGAGAGAGAGAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCACCTTTAACAAGATCTaGCTCCCTCTTCTGGTGTGTCTGAAGACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTTFNKI*LPLLVCLKTAT Trigger: TGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTAAAGGTGGTTGTGAGCCACCATGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | ACACACTTGCTCTGCTGTGGGCACTCACACAGGCTGTaGACTCCAGCACTCACATCCACAATTTGTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: THLLCCGHSHRL*TPALTSTICLF Trigger: AAACAAACAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAGAGCAAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGCTTCATAATCACAAATaGCAGCTTGCCAGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLWALTQAVNSSTHIHNLLHNHK*QLASQR Trigger: TCTTTGACTGGCAAGCTGCAATTTGTGATTATGAAG...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | GACTCTCTTATGGAGTTTCTCTCTGCTTGTTGCCCTTaGGGTCACCACTTTGCCCATAATCTACGGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DSLMEFLSACCP*GHHFAHNLRVV Trigger: TACAACCCGTAGATTATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACTCCATAAGAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CCA 72 bp | CTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCTCACTaGCAAATCTCCTGCCTCAGATTCTTTCCCCGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVISPLASSVSH*QISCLRFFPRV Trigger: AACTCGGGGAAAGAATCTGAGGCAGGAGATTTGCCAGTGAGACACAGAAGAAGCCAGAGGAGAAATAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGAAAAATAAAGTTGTaGGAGCCTAGCTTCATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMGKIKL*EPSFIH Trigger: ATGGATGAAGCTAGGCTCCAACAACTTTATTTTTCC...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | ACCAAAATCTGGCCTGCCTACTCAGAAACCAGCATTTaGATAATACAGAGACAATCTTTGCACAGCGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TKIWPAYSETSI*IIQRQSLHSAS Trigger: GCTTGCGCTGTGCAAAGATTGTCTCTGTATTATTCAAATGCTGGTTTCTGAGTAGGCAGGCCAGATTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | GTATCTCTGTTTCCTGATAAGGAGACATCAGCCAGTTaGGAGGACATTGAAGAATGTAGTTTAGGCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VSLFPDKETSAS*EDIEECSLGSV Trigger: CACAGAGCCTAAACTACATTCTTCAATGTCCTCTCAACTGGCTGATGTCTCCTTATCAGGAAACAGAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR TCA 72 bp | TCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTaGAGACAGCTACAGTGTACTCACATACATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SVMGSDALFWCV*RQLQCTHIHKI Trigger: TATTTTATGTATGTGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTAACACTTTTATATTAATCTATGTTCTGGGCTGGAGAGATGGCTCAGTGGTTCTCAGAAACCAGCATTaGAATAATACAGAGACAATC | + |
|
Preference number: 3 (lower is better) Translates to: TNTFILIYVLGWRDGSVVLRNQH*NNTETI Trigger: GATTGTCTCTGTATTATTCAAATGCTGGTTTCTGAG...AACCACTGAGCCATCTCTCCAGCCCAGAACATAGATTAATATAAAAGTGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR TCA 90 bp | CCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCCCTCCGAGGAAGGCAGTaGGCTCAGCACGGTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLVHCACSEDPTQACPSALRGRQ*AQHGGK Trigger: TTTACCACCGTGCTGAGCTCACTGCCTTCCTCGGAG...GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR GCA 90 bp | CCCTGCCTTGCTCTCTTAAAGCAGTCTCTCTCTCTCTCCTCTCTGCTCTCATGGAGTACGGCTGGCTTGTaGTGGGGGTGCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PCLALLKQSLSLSSLLSWSTAGL*WGCWVA Trigger: CGCCACCCAGCACCCCCAGCACAAGCCAGCCGTACT...CCATGAGAGCAGAGAGGAGAGAGAGAGAGACTGCTTTAAGAGAGCAAGGCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | CACCCTGACTCATCAAAGCTGGCTCCCAACACCCAGAAAGGGAGAGAACACGTGGCAGAGGAGTACGGCTaGCTTGTGCTGGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPDSSKLAPNTQKGREHVAEEYG*LVLGVL Trigger: CAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGC...CACGTGTTCTCTCCCTTTCTGGGTGTTGGGAGCCAGCTTTGATGAGTCAGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR GCA 90 bp | CCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCCACTGGACACAGTAGATaGCTAGGTCCAGCAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLVHCACSEDPTQACPSATGHSR*LGPADH Trigger: GTGGTCTGCTGGACCTAGGCATCTACTGTGTCCAGT...GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | GTAGACCAGGCTGGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTTGTGTGATGCTACCGCTACCACCTaGTGCTCCGAGGAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGADLHLPLGLKLCDATATT*CSEEGS Trigger: ACTGCCTTCCTCGGAGCACCAGGTGGTAGCGGTAGC...ATCACACAACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGCCTGGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | GAAAACAAAGGCAAGATGACTTTCAGGAGCCCAGATGTCAGGGGCTGTGTGGGAACGGCTGGCTTGTGCTaGGGGTGCTGGGTGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENKGKMTFRSPDVRGCVGTAGLC*GCWVAM Trigger: CATCGCCACCCAGCACCCCCAGCACAAGCCAGCCGT...TCCCACACAGCCCCTGACATCTGGGCTCCTGAAAGTCATCTTGCCTTTGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR GCA 90 bp | GTAGACCAGGCTGGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTTGTGTGATAAGGACAGCCTTGCCTaGTGCCAGGCAGAGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGADLHLPLGLKLCDKDSLA*CQAEEY Trigger: GTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTT...ATCACACAACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGCCTGGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR GCA 90 bp | CACCCTGACTCATCAAAGCTGGCTCCCAACACCCAGAAAGGGAGAGAACACGTGCACAAAGGACAGCCTTaGCTGCTGCCAGGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPDSSKLAPNTQKGREHVHKGQP*LLPGRG Trigger: TCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTG...CACGTGTTCTCTCCCTTTCTGGGTGTTGGGAGCCAGCTTTGATGAGTCAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | CCACTAGTGCACTGTGCATGCTCTGAAGACCCTACCCAAGCCTGCCCCTCTGCCCACCACCAGCTCTGTTaGGGCCCACAATTTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVHCACSEDPTQACPSAHHQLC*GPQFLN Trigger: ATTCAAAAATTGTGGGCCCCAACAGAGCTGGTGGTG...GGCAGAGGGGCAGGCTTGGGTAGGGTCTTCAGAGCATGCACAGTGCACTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CAA 72 bp | AGAGGCAGGGTCCCAAGGACTCCATGCTCTGAGGACTaGACTCTCTTATGGAGTTTCTCTCTGCTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRVPRTPCSED*TLLWSFSLLVA Trigger: GGCAACAAGCAGAGAGAAACTCCATAAGAGAGTCAAGTCCTCAGAGCATGGAGTCCTTGGGACCCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CAA 72 bp | GCTGGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTaGTGTGATACCATATCACCCAACATCACACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGADLHLPLGLK*CDTISPNITPR Trigger: TCTGGGTGTGATGTTGGGTGATATGGTATCACACAACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGTGACTCCATATGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGACTGAAGTAGCACGCTaGCAGTGTCATCCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAVTPYAVCVCVCVCVSVTEVAR*QCHPHL Trigger: CAGGTGTGGATGACACTGTCAGCGTGCTACTTCAGT...CACACTCACACACACACACACACACACACACACAGCATATGGAGTCACTGCAGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGGAGATGCTGCAGGTaGAGCTGCCATGAACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMRRCCR*SCHEPL Trigger: GAGGGGTTCATGGCAGCTTCACCTGCAGCATCTCCT...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCAGTGGTTAGGAGCACTGACTGTTCTTCCAGAGGTTCTGAGTTCAAATCACATACGCTGTGTTaGGGAGGTTGGAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DGSVVRSTDCSSRGSEFKSHTLC*GGWRRC Trigger: GCATCTCCTCCAACCTCCCCAACACAGCGTATGTGA...TTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCTCCTAACCACTGAGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| 3UTR CAA 72 bp | TCCCAACACCCAGAAAGGGAGAGAACACGTGCTGATTaGCAGCAGCAGCAGCAGCAACAACAACAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQHPERERTRAD*QQQQQQQQQQQ Trigger: TTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCAAATCAGCACGTGTTCTCTCCCTTTCTGGGTGTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGATCCTCCCAACAGCTaGAATCTTCTCTGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMDPPNS*NLLWLL Trigger: CAGAAGCCAGAGAAGATTTCAGCTGTTGGGAGGATC...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCTTGCTCTCTTAAAGCAGTCTCTCTCTCTCTCCTCTCTGCTCTCATGGGTGCACCAAAGATCATaGATAAGAACTGGACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCLALLKQSLSLSSLLSWVHQRS*IRTGHS Trigger: ACTGTGTCCAGTTCTTATCCATGATCTTTGGTGCAC...CCATGAGAGCAGAGAGGAGAGAGAGAGAGACTGCTTTAAGAGAGCAAGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 72 bp | AGTTTCTCTCTGCTTGTTGCCCTTGAGGTCACCACTTaGCCCATAATCTACGGGTTGTATGGAAACTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: SFSLLVALEVTT*PIIYGLYGNSK Trigger: CTTAGAGTTTCCATACAACCCGTAGATTATGGGCAAAGTGGTGACCTCAAGGGCAACAAGCAGAGAGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR GCA 90 bp | GGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGTGGCTTCATAGAGCATaGATGACCCATTTACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSEFKSQQPHGGSQPSVMWLHRA*MTHLQN Trigger: ATTTTGTAAATGGGTCATGCATGCTCTATGAAGCCA...CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR TCA 90 bp | AAATCTATGTTCTGTAACGTGGCTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCGTGGCCCGGGGTATATaGCTTAAATCAAATCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: KSMFCNVACYFSSGFFCVVARGI*LKSNPN Trigger: ATTCGGATTTGATTTAAGTCATATACCCCGGGCCAC...GACACAGAAGAAGCCAGAGGAGAAATAACAAGCCACGTTACAGAACATAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR TCA 90 bp | AAATCTATGTTCTGTAACGTGGCTTGTTATTTCTCCTCTGGCTTCTTCTGTGTCTCTCCGATAGTTCCTTaGACTAAAACTTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KSMFCNVACYFSSGFFCVSPIVP*TKTSLR Trigger: TCTGAGGGAAGTTTTAGTTCAAGGAACTATCGGAGA...GACACAGAAGAAGCCAGAGGAGAAATAACAAGCCACGTTACAGAACATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| 3UTR CAA 72 bp | AAGTTCTGTATTTTTGTTAAAGCTGAAACTATCCCATaGAAGCACTTCCAAGCAGGATGTAGTACACTTAGT | + |
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Preference number: 4 (lower is better) Translates to: KFCIFVKAETIP*KHFQAGCSTLS Trigger: ACTAAGTGTACTACATCCTGCTTGGAAGTGCTTCAATGGGATAGTTTCAGCTTTAACAAAAATACAGAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 90 bp | CTGCCAGGCAGAGGAGTACGGCTGGCTTGTGCTGGGGGTGCTGGGTaGCGATGTAGGCCACCTCCACGTTTGGGTCCTTGGCCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LPGRGVRLACAGGAG*RCRPPPRLGPWPVP Trigger: AGGAACTGGCCAAGGACCCAAACGTGGAGGTGGCCTACATCGCCACCCAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 90 bp | CTCACAAAGGACAGCCTTGCCTGCTGCCAGGCAGAGGAGTACGGCTaGCTTGTGCTGGGGGTGCTGGGTGGCGATGTAGGCCACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LTKDSLACCQAEEYG*LVLGVLGGDVGHLH Trigger: GTGGAGGTGGCCTACATCGCCACCCAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 90 bp | TGCATTCACGCCCATGGGTTTCTCACAAAGGACAGCCTTGCCTGCTaGCAGGCAGAGGAGTACGGCTGGCTTGTGCTGGGGGTGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: CIHAHGFLTKDSLAC*QAEEYGWLVLGVLG Trigger: ACCCAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTGAATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 90 bp | TGCTGCATTCACGCCCATGGGTTTCTCACAAAGGACAGCCTTGCCTaGTGCCAGGCAGAGGAGTACGGCTGGCTTGTGCTGGGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CCIHAHGFLTKDSLA*CQAEEYGWLVLGVL Trigger: CAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTGAATGCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 90 bp | CTTCTGCTGCATTCACGCCCATGGGTTTCTCACAAAGGACAGCCTTaGCTGCTGCCAGGCAGAGGAGTACGGCTGGCTTGTGCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LLLHSRPWVSHKGQP*LLPGRGVRLACAGG Trigger: ACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTGAATGCAGCAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS TCA 90 bp | AGCAGACCACCTCCGGCTTGGTTCCAGTCTGTGGCCCGGGGTATATaGCTTAAATCAAATCCGAATTCTGCCCGGGCCACTCGTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRPPPAWFQSVARGI*LKSNPNSARATRRS Trigger: AGACCTACGAGTGGCCCGGGCAGAATTCGGATTTGATTTAAGTCATATACCCCGGGCCACAGACTGGAACCAAGCCGGAGGTGGTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR CAA 90 bp | GTAGACCAGGCTGGCGCAGACCTCCACCTGCCTCTGGGATTAAAGTTGTGTGATCTCACATACGCTGTGTaGGGGAGGTTGGAGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: VDQAGADLHLPLGLKLCDLTYAV*GRLEEM Trigger: CATCTCCTCCAACCTCCCCAACACAGCGTATGTGAG...ATCACACAACTTTAATCCCAGAGGCAGGTGGAGGTCTGCGCCAGCCTGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR CAA 90 bp | GGCTCAGTGGTTAGGAGCACTGACTGTTCTTCCAGAGGTTCTGAGTTCAAATCCAGGCCACCTCCACGTTaGGGTCCTTGGCCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSVVRSTDCSSRGSEFKSRPPPR*GPWPVP Trigger: AGGAACTGGCCAAGGACCCAAACGTGGAGGTGGCCT...GGATTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCTCCTAACCACTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 90 bp | GCTTCTGTGCACCAAAGATCATGGATAAGAACTGGACACAGTAGATaGCTAGGTCCAGCAGACCACCTCCGGCTTGGTTCCAGTCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: ASVHQRSWIRTGHSR*LGPADHLRLGSSLW Trigger: CCACAGACTGGAACCAAGCCGGAGGTGGTCTGCTGGACCTAGGCATCTACTGTGTCCAGTTCTTATCCATGATCTTTGGTGCACAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS TCA 90 bp | TTCCTCTCTCCATTCACCACCAGCTCTGTTGGGGCCCACAATTTTTaGATCTGGGCCATGCCCTTGGTACCACTCACATACGCTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FLSPFTTSSVGAHNF*IWAMPLVPLTYAVL Trigger: CAACACAGCGTATGTGAGTGGTACCAAGGGCATGGCCCAGATTCAAAAATTGTGGGCCCCAACAGAGCTGGTGGTGAATGGAGAGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR CAA 90 bp | CTGCTGTGGGCACTCACACAGGCTGTGAACTCCAGCACTCACATCCACAATTTGTCACCACCAGCTCTGTaGGGGCCCACAATTTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LLWALTQAVNSSTHIHNLSPPAL*GPTIFE Trigger: TTCAAAAATTGTGGGCCCCAACAGAGCTGGTGGTGA...CAAATTGTGGATGTGAGTGCTGGAGTTCACAGCCTGTGTGAGTGCCCACAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS-3UTR CAA 90 bp | GATGGCTCAGTGGTTAGGAGCACTGACTGTTCTTCCAGAGGTTCTGAGTTCAAAATCTGGGCCATGCCCTaGGTACCACTCACATACGCT | + |
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Preference number: 5 (lower is better) Translates to: DGSVVRSTDCSSRGSEFKIWAMP*VPLTYA Trigger: AGCGTATGTGAGTGGTACCAAGGGCATGGCCCAGAT...TTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCTCCTAACCACTGAGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 90 bp | TCCCAACAGCTGAAATCTTCTCTGGCTTCTGTGCACCAAAGATCATaGATAAGAACTGGACACAGTAGATGCCTAGGTCCAGCAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: SQQLKSSLASVHQRS*IRTGHSRCLGPADH Trigger: GTGGTCTGCTGGACCTAGGCATCTACTGTGTCCAGTTCTTATCCATGATCTTTGGTGCACAGAAGCCAGAGAAGATTTCAGCTGTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 72 bp | GCCCGGTTCAGGTCCCTCGCAGCTACCGCTACCACCTaGTGCTCCGAGGAAGGCAGTGAGCTCAGCACGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARFRSLAATATT*CSEEGSELSTV Trigger: CACCGTGCTGAGCTCACTGCCTTCCTCGGAGCACCAGGTGGTAGCGGTAGCTGCGAGGGACCTGAACCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 72 bp | CGGTTCAGGTCCCTCGCAGCTACCGCTACCACCTGGTaGTCCGAGGAAGGCAGTGAGCTCAGCACGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RFRSLAATATTW*SEEGSELSTVV Trigger: TACCACCGTGCTGAGCTCACTGCCTTCCTCGGAGCACCAGGTGGTAGCGGTAGCTGCGAGGGACCTGAACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 72 bp | AGAGGAGTACGGCTGGCTTGTGCTGGGGGTGCTGGGTaGCGATGTAGGCCACCTCCACGTTTGGGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RGVRLACAGGAG*RCRPPPRLGPW Trigger: CCAAGGACCCAAACGTGGAGGTGGCCTACATCGCCACCCAGCACCCCCAGCACAAGCCAGCCGTACTCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 72 bp | CACGCCCATGGGTTTCTCACAAAGGACAGCCTTGCCTaGTGCCAGGCAGAGGAGTACGGCTGGCTTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HAHGFLTKDSLA*CQAEEYGWLVL Trigger: CAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CAA 90 bp | ACTTCTGCTGCATTCACGCCCATGGGTTTCTCACAAAGGACAGCCTaGCCTGCTGCCAGGCAGAGGAGTACGGCTGGCTTGTGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSAAFTPMGFSQRTA*PAARQRSTAGLCWG Trigger: CCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTGAATGCAGCAGAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CCA 72 bp | GGGTGGCGATGTAGGCCACCTCCACGTTTGGGTCCTTaGCCAGTTCCTCATAAGAGCCATAGGCCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GWRCRPPPRLGP*PVPHKSHRPWG Trigger: TCCCCAAGGCCTATGGCTCTTATGAGGAACTGGCCAAGGACCCAAACGTGGAGGTGGCCTACATCGCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CAA 72 bp | GAGGAAGGCAGTGAGCTCAGCACGGTGGTAAAGTCGTaGGCAATTAAGCCAGCCGACACGATGCCCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: EEGSELSTVVKS*AIKPADTMPQR Trigger: GCGCTGGGGCATCGTGTCGGCTGGCTTAATTGCCAACGACTTTACCACCGTGCTGAGCTCACTGCCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 72 bp | CATTCACGCCCATGGGTTTCTCACAAAGGACAGCCTTaGCTGCTGCCAGGCAGAGGAGTACGGCTGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HSRPWVSHKGQP*LLPGRGVRLAC Trigger: ACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCCTTTGTGAGAAACCCATGGGCGTGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS TCA 72 bp | AATCGGCTCCAAATGGCCTCCATAAGGAAGACGCCTTaGGAACGGGCTTTGGCAACCATCTCCCGAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: NRLQMASIRKTP*ERALATISRTS Trigger: AGAAGTTCGGGAGATGGTTGCCAAAGCCCGTTCTCAAGGCGTCTTCCTTATGGAGGCCATTTGGAGCCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 72 bp | CACCAAAGATCATGGATAAGAACTGGACACAGTAGATaGCTAGGTCCAGCAGACCACCTCCGGCTTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HQRSWIRTGHSR*LGPADHLRLGS Trigger: GGAACCAAGCCGGAGGTGGTCTGCTGGACCTAGGCATCTACTGTGTCCAGTTCTTATCCATGATCTTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CAA 72 bp | AAATCGGCTCCAAATGGCCTCCATAAGGAAGACGCCTaGAGAACGGGCTTTGGCAACCATCTCCCGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: KSAPNGLHKEDA*RTGFGNHLPNF Trigger: GAAGTTCGGGAGATGGTTGCCAAAGCCCGTTCTCAAGGCGTCTTCCTTATGGAGGCCATTTGGAGCCGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS CAA 90 bp | CTTCCTCTCTCCATTCACCACCAGCTCTGTTGGGGCCCACAATTTTaGAATCTGGGCCATGCCCTTGGTACCACTCACATACGCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LPLSIHHQLCWGPQF*NLGHALGTTHIRCV Trigger: AACACAGCGTATGTGAGTGGTACCAAGGGCATGGCCCAGATTCAAAAATTGTGGGCCCCAACAGAGCTGGTGGTGAATGGAGAGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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| CDS GCA 72 bp | GCAGGCACTCACGCACGTGGTTGGCTTCATAGAGCATaGATGACCCATTTACAAAATTGTAGTCCTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: AGTHARGWLHRA*MTHLQNCSPSQ Trigger: TTGGGAAGGACTACAATTTTGTAAATGGGTCATGCATGCTCTATGAAGCCAACCACGTGCGTGAGTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011526.7 |
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