Pregenerated sensors for DGUOK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014554Ensembl transcript IDs: ENSMUST00000014698.10, ENSMUST00000113888.3, ENSMUST00000138941.3, ENSMUST00000145455.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCACCAGCACTGGCACGTGCTGCAGAGCTTCGAAGTGGAGCCTaGGGCAGCGAGAGGGAGCTCAGGCAACGCCACTCACCTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PAPALARAAELRSGA*GSERELRQRHSPSS Trigger: TGAGGAAGGTGAGTGGCGTTGCCTGAGCTCCCTCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 90 bp | GTGACATCCAGCACCAGCACTGGCACGTGCTGCAGAGCTTCGAAGTaGAGCCTGGGGCAGCGAGAGGGAGCTCAGGCAACGCCACTCACC | + |
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Preference number: 1 (lower is better) Translates to: VTSSTSTGTCCRASK*SLGQREGAQATPLT Trigger: GGTGAGTGGCGTTGCCTGAGCTCCCTCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGATGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 90 bp | TCAGAGAAGTCTTCAGTGACATCCAGCACCAGCACTGGCACGTGCTaGAGAGCTTCGAAGTGGAGCCTGGGGCAGCGAGAGGGAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SEKSSVTSSTSTGTC*RASKWSLGQREGAQ Trigger: CTGAGCTCCCTCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 90 bp | ACAAAGCAACAAGGCCTGACACAGAGGCCGGGAAGACCAGAGCTCTaGACTGGGAACCAGGACGAGCCTAGGCTGTGCTCACCTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TKQQGLTQRPGRPEL*TGNQDEPRLCSPVP Trigger: TGGGACAGGTGAGCACAGCCTAGGCTCGTCCTGGTTCCCAGTGCAGAGCTCTGGTCTTCCCGGCCTCTGTGTCAGGCCTTGTTGCTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 90 bp | GGCGGCATTTTCAGAGAAGTCTTCAGTGACATCCAGCACCAGCACTaGCACGTGCTGCAGAGCTTCGAAGTGGAGCCTGGGGCAGCGAGA | + |
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Preference number: 1 (lower is better) Translates to: GGIFREVFSDIQHQH*HVLQSFEVEPGAAR Trigger: TCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTGAAAATGCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 90 bp | GGCAACGCCACTCACCTTCCTCACACCCAGCCCGAGTCTCAAGACTaGAGCTGCCTGCAGAGTGGAAGGCTGAGTAGACTGCTCACTAGT | + |
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Preference number: 1 (lower is better) Translates to: GNATHLPHTQPESQD*SCLQSGRLSRLLTS Trigger: ACTAGTGAGCAGTCTACTCAGCCTTCCACTCTGCAGGCAGCTTCAGTCTTGAGACTCGGGCTGGGTGTGAGGAAGGTGAGTGGCGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 90 bp | ACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATaGGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: TMAVQRQHTPRCGGA*GAKGMCITGWRAVS Trigger: GCTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
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| 3UTR CCA 90 bp | AGTGGCAGCTGGGAACAGAACCCACATGTTCCTTGTCCCCCATTTTaGAACACCTTACAGGAGGAAGTCAGCTGGCCTGCGCATGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: SGSWEQNPHVPCPPF*NTLQEEVSWPAHAK Trigger: CTTAGCATGCGCAGGCCAGCTGACTTCCTCCTGTAAGGTGTTCCAAAATGGGGGACAAGGAACATGTGGGTTCTGTTCCCAGCTGCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 90 bp | GTTTTGGAGTGTGAAATGCAATTTGAAGCACAAAGCAACAAGGCCTaGCACAGAGGCCGGGAAGACCAGAGCTCTGCACTGGGAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: VLECEMQFEAQSNKA*HRGREDQSSALGTR Trigger: CCTGGTTCCCAGTGCAGAGCTCTGGTCTTCCCGGCCTCTGTGTCAGGCCTTGTTGCTTTGTGCTTCAAATTGCATTTCACACTCCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 90 bp | GAGGAAGTCAGCTGGCCTGCGCATGCTAAGAGTCACCTAACTGACTaGTACTTCCTAATGCAGTGCACTTTAGAGCTGGGCATTGTATCT | + |
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Preference number: 1 (lower is better) Translates to: EEVSWPAHAKSHLTD*YFLMQCTLELGIVS Trigger: AGATACAATGCCCAGCTCTAAAGTGCACTGCATTAGGAAGTATCAGTCAGTTAGGTGACTCTTAGCATGCGCAGGCCAGCTGACTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 90 bp | AGTCTTCGTGCTGACTATGTAGCTGTTGAAGATAGGCCAGCTCAATaGCCTTTTCTTCTTCTCTATCCCTCTGGTAGAGTCTCTCCATAC | + |
|
Preference number: 1 (lower is better) Translates to: SLRADYVAVEDRPAQ*PFLLLYPSGRVSPY Trigger: GTATGGAGAGACTCTACCAGAGGGATAGAGAAGAAGAAAAGGGCATTGAGCTGGCCTATCTTCAACAGCTACATAGTCAGCACGAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 90 bp | CTGATACTTCCTAATGCAGTGCACTTTAGAGCTGGGCATTGTATCTaGGATTTGCCTATGAGCTCAGGGTTTTGGAGTGTGAAATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LILPNAVHFRAGHCI*DLPMSSGFWSVKCN Trigger: ATTGCATTTCACACTCCAAAACCCTGAGCTCATAGGCAAATCCCAGATACAATGCCCAGCTCTAAAGTGCACTGCATTAGGAAGTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 90 bp | TCAATCAAAATGGACATTTTTCTAAACAACTTCAGTCTTCCATCCTaGGCCAATTATGACAAGCATTCACCACAAGGCACAATCGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SIKMDIFLNNFSLPS*ANYDKHSPQGTIER Trigger: TCTCTCGATTGTGCCTTGTGGTGAATGCTTGTCATAATTGGCTCAGGATGGAAGACTGAAGTTGTTTAGAAAAATGTCCATTTTGATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCCTGGGGCAGCGAGAGGGAGCTCAGGCAACGCCACTCACCTTCCTCACAGCCACTCGATGTCACTaGGGGAGCCATTTTCAAATA | + |
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Preference number: 2 (lower is better) Translates to: WSLGQREGAQATPLTFLTATRCH*GSHFQI Trigger: TATTTGAAAATGGCTCCCTCAGTGACATCGAGTGGC...TGTGAGGAAGGTGAGTGGCGTTGCCTGAGCTCCCTCTCGCTGCCCCAGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAGGCCGGGAAGACCAGAGCTCTGCACTGGGAACCAGGACGAGCCTAGGAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TQRPGRPELCTGNQDEPRKPGDR*SRVTKA Trigger: GGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTT...CCTAGGCTCGTCCTGGTTCCCAGTGCAGAGCTCTGGTCTTCCCGGCCTCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CAA 90 bp | TCAGACAGCAGGAAGTGGCAGCTGGGAACAGAACCCACATGTTCCTaGTCCCCCATTTTGGAACACCTTACAGGAGGAAGTCAGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: SDSRKWQLGTEPTCS*SPILEHLTGGSQLA Trigger: GGCCAGCTGACTTCCTCCTGTAAGGTGTTCCAAAATGGGGGACAAGGAACATGTGGGTTCTGTTCCCAGCTGCCACTTCCTGCTGTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTGGGGCCAAAGGGATGTaGATAACAGGATGGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ESSQHLRKSESRPQPRVLGAKGM*ITGWRA Trigger: TGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCC...AAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCTGGGAACAGAACCCACATGTTCCTTGTCCCCCATTTTGGAACACCTTACAGAGAAGTCTTCAGTaGCATCCAGCACCAGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GSWEQNPHVPCPPFWNTLQRSLQ*HPAPAL Trigger: CAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTG...TAAGGTGTTCCAAAATGGGGGACAAGGAACATGTGGGTTCTGTTCCCAGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCCATCCTGAGCCAATTATGACAAGCATTCACCACAAGGCACAATCGAGAACCCAGGTGTGGGGGTaGATGAGGGGCCAAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VFHPEPIMTSIHHKAQSRTQVWG*MRGQRD Trigger: ATCCCTTTGGCCCCTCATGCACCCCCACACCTGGGT...TCTCGATTGTGCCTTGTGGTGAATGCTTGTCATAATTGGCTCAGGATGGAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGCTCAGCACGGTGGTGGAGGCTCTGGTCTGTCTGTTACACACTTACTTGTACAAACCTCTGCCTTaGCGTTCATGCTTTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: AVLSTVVEALVCLLHTYLYKPLP*RSCFSS Trigger: AGATGAAAAGCATGAACGCCAAGGCAGAGGTTTGTA...CAAGTAAGTGTGTAACAGACAGACCAGAGCCTCCACCACCGTGCTGAGCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR GCA 90 bp | CCAATTATGACAAGCATTCACCACAAGGCACAATCGAGAGAAAAGAAAGGAAGGCGGTTTGCGAACTCCTaGAGGAGAAAGGAGTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PIMTSIHHKAQSREKKGRRFANS*RRKECQ Trigger: CTGGCACTCCTTTCTCCTGCAGGAGTTCGCAAACCG...CCTTCCTTTCTTTTCTCTCGATTGTGCCTTGTGGTGAATGCTTGTCATAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCCATCCTGAGCCAATTATGACAAGCATTCACCACAAGGCACAATCGAGAACTTCAAGAGCCTGCTaGTTTCTTTCTCCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VFHPEPIMTSIHHKAQSRTSRAC*FLSPGV Trigger: CACCCCAGGAGAAAGAAAGCAGCAGGCTCTTGAAGT...TCTCGATTGTGCCTTGTGGTGAATGCTTGTCATAATTGGCTCAGGATGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGGCCACGTGTCCTTATTaGTTACAAGTTCCTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: RGQRDVHNRMESSQHLRKATCPY*LQVPHK Trigger: TTTATGAGGAACTTGTAAGCAATAAGGACACGTGGC...CTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | AGATGCTGGGCACGTCCCGCATCCTTGCAGTTCCGCTaGGAGCTACGGCTGTGCTCAGCACGGTGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RCWARPASLQFR*ELRLCSARWWR Trigger: CCTCCACCACCGTGCTGAGCACAGCCGTAGCTCCCAGCGGAACTGCAAGGATGCGGGACGTGCCCAGCATCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | GCACTGGCACGTGCTGCAGAGCTTCGAAGTGGAGCCTaGGGCAGCGAGAGGGAGCTCAGGCAACGCCACTCA | + |
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Preference number: 3 (lower is better) Translates to: ALARAAELRSGA*GSERELRQRHS Trigger: TGAGTGGCGTTGCCTGAGCTCCCTCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 72 bp | CCCGCATCCTTGCAGTTCCGCTGGGAGCTACGGCTGTaGTCAGCACGGTGGTGGAGGCTCTGGTCTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: PASLQFRWELRL*SARWWRLWSVC Trigger: ACAGACAGACCAGAGCCTCCACCACCGTGCTGAGCACAGCCGTAGCTCCCAGCGGAACTGCAAGGATGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 72 bp | CAAGGCCTGACACAGAGGCCGGGAAGACCAGAGCTCTaGACTGGGAACCAGGACGAGCCTAGGCTGTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QGLTQRPGRPEL*TGNQDEPRLCS Trigger: TGAGCACAGCCTAGGCTCGTCCTGGTTCCCAGTGCAGAGCTCTGGTCTTCCCGGCCTCTGTGTCAGGCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | TTCCGCTGGGAGCTACGGCTGTGCTCAGCACGGTGGTaGAGGCTCTGGTCTGTCTGTTACACACTTACTTGG | + |
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Preference number: 3 (lower is better) Translates to: FRWELRLCSARW*RLWSVCYTLTW Trigger: CCAAGTAAGTGTGTAACAGACAGACCAGAGCCTCCACCACCGTGCTGAGCACAGCCGTAGCTCCCAGCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | CAGTTCCGCTGGGAGCTACGGCTGTGCTCAGCACGGTaGTGGAGGCTCTGGTCTGTCTGTTACACACTTACT | + |
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Preference number: 3 (lower is better) Translates to: QFRWELRLCSAR*WRLWSVCYTLT Trigger: AGTAAGTGTGTAACAGACAGACCAGAGCCTCCACCACCGTGCTGAGCACAGCCGTAGCTCCCAGCGGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | AACCAGGACGAGCCTAGGCTGTGCTCACCTGTCCCATaGGCTCTTCCTGCCTGGCGGCATTTTCAGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: NQDEPRLCSPVP*ALPAWRHFQRS Trigger: ACTTCTCTGAAAATGCCGCCAGGCAGGAAGAGCTCATGGGACAGGTGAGCACAGCCTAGGCTCGTCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | TTCAGAGAAGTCTTCAGTGACATCCAGCACCAGCACTaGCACGTGCTGCAGAGCTTCGAAGTGGAGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: FREVFSDIQHQH*HVLQSFEVEPG Trigger: CCCAGGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | GTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATaGGGGGCCAAAGGGATGTGCATAACAGGATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VQRQHTPRCGGA*GAKGMCITGWR Trigger: TCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | GGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTaGGAAAGTCAGAGTCCAGACCACAGCCACGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: GMCITGWRAVSI*ESQSPDHSHVS Trigger: GGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | AACAATGGCAGTACAAAGACAGCACACACCCAGGTGTaGGGGTGCATGAGGGGCCAAAGGGATGTGCATAAC | + |
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Preference number: 3 (lower is better) Translates to: NNGSTKTAHTQV*GCMRGQRDVHN Trigger: GTTATGCACATCCCTTTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | AGCTGGCCTGCGCATGCTAAGAGTCACCTAACTGACTaGTACTTCCTAATGCAGTGCACTTTAGAGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SWPAHAKSHLTD*YFLMQCTLELG Trigger: GCCCAGCTCTAAAGTGCACTGCATTAGGAAGTATCAGTCAGTTAGGTGACTCTTAGCATGCGCAGGCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | CCCTCTGGTAGAGTCTCTCCATACAAACCTCTGCCTTaGCGTTCATGCTTTTCATCTGGACACTTCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PSGRVSPYKPLP*RSCFSSGHFKS Trigger: GCTCTTGAAGTGTCCAGATGAAAAGCATGAACGCCAAGGCAGAGGTTTGTATGGAGAGACTCTACCAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | CCTAATGCAGTGCACTTTAGAGCTGGGCATTGTATCTaGGATTTGCCTATGAGCTCAGGGTTTTGGAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PNAVHFRAGHCI*DLPMSSGFWSV Trigger: CACACTCCAAAACCCTGAGCTCATAGGCAAATCCCAGATACAATGCCCAGCTCTAAAGTGCACTGCATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR GCA 72 bp | TGCTGCCGTCTCAGTACTCCCCTTAGTGTATGTGACTaGAGTCCCATGAGCATTTATGAGGTGAGAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: CCRLSTPLSVCD*SPMSIYEVRKH Trigger: ATGTTTTCTCACCTCATAAATGCTCATGGGACTGCAGTCACATACACTAAGGGGAGTACTGAGACGGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR CCA 72 bp | ATACAAACCTCTGCCTTGGCGTTCATGCTTTTCATCTaGACACTTCAAGAGCCTGCTGCTTTCTTTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: IQTSALAFMLFI*TLQEPAAFFLL Trigger: CAGGAGAAAGAAAGCAGCAGGCTCTTGAAGTGTCCAGATGAAAAGCATGAACGCCAAGGCAGAGGTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | TCTAAACAACTTCAGTCTTCCATCCTGAGCCAATTATaGCAAGCATTCACCACAAGGCACAATCGAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SKQLQSSILSQL*QAFTTRHNREK Trigger: TTTCTCTCGATTGTGCCTTGTGGTGAATGCTTGTCATAATTGGCTCAGGATGGAAGACTGAAGTTGTTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| 3UTR TCA 72 bp | ATGGACATTTTTCTAAACAACTTCAGTCTTCCATCCTaGGCCAATTATGACAAGCATTCACCACAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: MDIFLNNFSLPS*ANYDKHSPQGT Trigger: TGTGCCTTGTGGTGAATGCTTGTCATAATTGGCTCAGGATGGAAGACTGAAGTTGTTTAGAAAAATGTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| CDS-3UTR GCA 90 bp | ACACAGAGGCCGGGAAGACCAGAGCTCTGCACTGGGAACCAGGACGAGCCTAGGCCGCACAGACTTCTCTaGCTGCAGGAGTCTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TQRPGRPELCTGNQDEPRPHRLL*LQESPW Trigger: CCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGG...CCTAGGCTCGTCCTGGTTCCCAGTGCAGAGCTCTGGTCTTCCCGGCCTCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| CDS-3UTR CCA 90 bp | AACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCTGCAGGAGTCTCCCTaGGATGGGCTCCAGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: NNGSTKTAHTQVWGCMRGLQESP*DGLQLH Trigger: GTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAG...GCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
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| CDS-3UTR GCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGCGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQRCCLQ*RAFGGR Trigger: GCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCG...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
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| CDS-3UTR GCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGGGGATGGGCTCCAGCTaGACCTTCAGACGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQGMGSS*TFRRLM Trigger: CATGAGCCGTCTGAAGGTGCAGCTGGAGCCCATCCC...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
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| CDS-3UTR CCA 90 bp | GCTGCAGAGCTTCGAAGTGGAGCCTGGGGCAGCGAGAGGGAGCTCAGGCAACGCCATCGTGCTGGCTCCTaGTACATCATTTCTAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AAELRSGAWGSERELRQRHRAGS*YIISSK Trigger: CTTGCTAGAAATGATGTACCAGGAGCCAGCACGATG...GCGTTGCCTGAGCTCCCTCTCGCTGCCCCAGGCTCCACTTCGAAGCTCTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| CDS-3UTR TCA 90 bp | CAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCATGGGCTCCAGCAGCCTaGATATTCTGCCACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QWQYKDSTHPGVGVHEGPWAPAA*IFCHSA Trigger: AGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCA...TGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
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| CDS-3UTR GCA 90 bp | AAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGGGGATGGGCTCCAGCTaGACCTTCAGACGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQWQYKDSTHPGVGVHEGGMGSS*TFRRLM Trigger: CATGAGCCGTCTGAAGGTGCAGCTGGAGCCCATCCC...CCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCAACAGACTTCTCTGCCTaGAGGAGTCTCCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QWQYKDSTHPGVGVHEGPTDFSA*RSLPGM Trigger: CATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGT...TGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | AAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCGCACAGACTTCTCTaGCTGCAGGAGTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQWQYKDSTHPGVGVHEGPHRLL*LQESPW Trigger: CCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGG...CCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGGGAGTCTCCCTGGGATaGGCTCCAGCTGCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQWQYKDSTHPGVGVHEGGVSLG*APAAPS Trigger: TGAAGGTGCAGCTGGAGCCCATCCCAGGGAGACTCC...CCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTGCAGGAGTCTCCCTaGGATGGGCTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MESSQHLRKSESRPQPRVLQESP*DGLQLH Trigger: GTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAG...GACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGATCCAGCACCAGCACTaGCACGTGCTGCAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQIQHQH*HVLQSF Trigger: GAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGAT...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGCAGCTGGGAACAGAACCCACATGTTCCTTGTCCCCCATTTTGGAACGGGATGGGCTCCAGCTaGACCTTCAGACGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSWEQNPHVPCPPFWNGMGSS*TFRRLM Trigger: CATGAGCCGTCTGAAGGTGCAGCTGGAGCCCATCCC...GTTCCAAAATGGGGGACAAGGAACATGTGGGTTCTGTTCCCAGCTGCCACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | AGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTCCGCACAGACTTCTCTaGCTGCAGGAGTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMESSQHLRKSESRPQPRPHRLL*LQESPW Trigger: CCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGG...ACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCCCATGAGCTCTTCCTaGCTGGCGGCATTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNGSTKTAHTQVWGCMRGPMSSS*LAAFSE Trigger: CTCTGAAAATGCCGCCAGGCAGGAAGAGCTCATGGG...GCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTGGAGTCTCCCTGGGATaGGCTCCAGCTGCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESSQHLRKSESRPQPRVLGVSLG*APAAPS Trigger: TGAAGGTGCAGCTGGAGCCCATCCCAGGGAGACTCC...AAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGCTGCAGGAGTCTCCCTaGGATGGGCTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNNGSTKTAHTQVWGCMRLQESP*DGLQLH Trigger: GTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAG...CCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCACCTTCAGACGGCTCATaGAAGAAAGGGTCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QWQYKDSTHPGVGVHEGPPSDGS*KKGSGM Trigger: CATTCCAGACCCTTTCTTTCATGAGCCGTCTGAAGG...TGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCAACAGAGAAGTCTTCAGTaGCATCCAGCACCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSTKTAHTQVWGCMRGQQRSLQ*HPAPAL Trigger: CAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTG...TTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS-3UTR GCA 90 bp | AACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRMESSQHLRKSESRPQPRCCLQ*RAFGGR Trigger: GCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCG...TGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATGGGATGGGCTCCAGCTaGACCTTCAGACGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EQSASEKVRVQTTATCPYGMGSS*TFRRLM Trigger: CATGAGCCGTCTGAAGGTGCAGCTGGAGCCCATCCC...ATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCTGTTCACCTGTCCCATaGGCTCTTCCTGCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESCSPVP*ALPAWR Trigger: CCGCCAGGCAGGAAGAGCTCATGGGACAGGTGAACA...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS-3UTR GCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGTGTGTAGGACCATCGTaGTGGCTCCTGGTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQCVGPS*WLLVHH Trigger: ATGATGTACCAGGAGCCAGCACGATGGTCCTACACA...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGCCGCACAGACTTCTCTaGCTGCAGGAGTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKNNGSTKTAHTQVWGCMPHRLL*LQESPW Trigger: CCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGG...CATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCAAGTAGGACCATCGTGCTaGCTCCTGGTACATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSTKTAHTQVWGCMRGQVGPSC*LLVHHF Trigger: GAAATGATGTACCAGGAGCCAGCACGATGGTCCTAC...TTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACTGCAGGAGTCTCCCTaGGATGGGCTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SASEKVRVQTTATCPYCLLQESP*DGLQLH Trigger: GTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAG...TAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGGCCACTCGATGTCACTaGGGGAGCCATTTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQATRCH*GSHFQI Trigger: TATTTGAAAATGGCTCCCTCAGTGACATCGAGTGGC...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCAACATACAAACCTGGGGTaGAGCCTGGAGATAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGSTKTAHTQVWGCMRGQHTNLG*SLEIDE Trigger: TTCATCTATCTCCAGGCTTCACCCCAGGTTTGTATG...TTGGCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR TCA 90 bp | TGGGGGTGCATGAGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGTTCTTTCTCCTGGGGTaGAGCCTGGAGATAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGCMRGQRDVHNRMESSQFFLLG*SLEIDE Trigger: TTCATCTATCTCCAGGCTTCACCCCAGGAGAAAGAA...CTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCTCATGCACCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SASEKVRVQTTATCPYCLRCCLQ*RAFGGR Trigger: GCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCG...TAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCCAAGACGTTTGGAAGTaGCATCTTTTTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNGSTKTAHTQVWGCMRGQDVWK*HLFGLQ Trigger: CTGGAGCCCAAAAAGATGGCACTTCCAAACGTCTTG...GCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATCGGTTTGCGAACTCCTaGAGGAGAAAGGAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSASEKVRVQTTATCPYRFANS*RRKECQ Trigger: CTGGCACTCCTTTCTCCTGCAGGAGTTCGCAAACCG...ATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACTGGGCTCCAGCAGCCTaGATATTCTGCCACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLRKSESRPQPRVLIAYWAPAA*IFCHSA Trigger: AGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCA...GTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTCCTTCAGACGGCTCATaGAAGAAAGGGTCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ESSQHLRKSESRPQPRVLPSDGS*KKGSGM Trigger: CATTCCAGACCCTTTCTTTCATGAGCCGTCTGAAGG...AAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQWQYKDSTHPGVGVHEGKPGDR*SRVTKA Trigger: GGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTT...CCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR GCA 90 bp | AGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTTGTGTAGGACCATCGTaGTGGCTCCTGGTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RMESSQHLRKSESRPQPRCVGPS*WLLVHH Trigger: ATGATGTACCAGGAGCCAGCACGATGGTCCTACACA...ACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | GTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCAACAGACTTCTCTGCCTaGAGGAGTCTCCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VHNRMESSQHLRKSESRPTDFSA*RSLPGM Trigger: CATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGT...TGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | CATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGACAGACTTCTCTGCCTaGAGGAGTCTCCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HNRMESSQHLRKSESRPQTDFSA*RSLPGM Trigger: CATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGT...CTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | CAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACCGGTTTGCGAACTCCTaGAGGAGAAAGGAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLRKSESRPQPRVLIAYRFANS*RRKECQ Trigger: CTGGCACTCCTTTCTCCTGCAGGAGTTCGCAAACCG...GTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCCGGTTTGCGAACTCCTaGAGGAGAAAGGAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESRFANS*RRKECQ Trigger: CTGGCACTCCTTTCTCCTGCAGGAGTTCGCAAACCG...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | AAAAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGACCTGCCACTCCGGGTaGGTTTTCATGAGTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNNGSTKTAHTQVWGCMRTCHSG*VFMSNF Trigger: GAAGTTACTCATGAAAACTCACCCGGAGTGGCAGGT...CCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTATGGGCTCCAGCAGCCTaGATATTCTGCCACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SASEKVRVQTTATCPYCLWAPAA*IFCHSA Trigger: AGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCA...TAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | AACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACCTTCAGACGGCTCATaGAAGAAAGGGTCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NRMESSQHLRKSESRPQPPSDGS*KKGSGM Trigger: CATTCCAGACCCTTTCTTTCATGAGCCGTCTGAAGG...TGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RMESSQHLRKSESRPQPRKPGDR*SRVTKA Trigger: GGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTT...ACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCTCACAAAGGTGGATTTaGCCACAGCGATGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MESSQHLRKSESRPQPRVSQRWI*PQRCCL Trigger: AAGGCAACATCGCTGTGGGCAAATCCACCTTTGTGA...GACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | AGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTCAAGACGTTTGGAAGTaGCATCTTTTTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RMESSQHLRKSESRPQPRQDVWK*HLFGLQ Trigger: CTGGAGCCCAAAAAGATGGCACTTCCAAACGTCTTG...ACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | GATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGAACAGACTTCTCTGCCTaGAGGAGTCTCCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DVHNRMESSQHLRKSESRTDFSA*RSLPGM Trigger: CATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGT...TCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| 3UTR CAA 72 bp | AGGAAGTGGCAGCTGGGAACAGAACCCACATGTTCCTaGTCCCCCATTTTGGAACACCTTACAGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKWQLGTEPTCS*SPILEHLTGGS Trigger: ACTTCCTCCTGTAAGGTGTTCCAAAATGGGGGACAAGGAACATGTGGGTTCTGTTCCCAGCTGCCACTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCACCTGCCACTCCGGGTaGGTTTTCATGAGTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESTCHSG*VFMSNF Trigger: GAAGTTACTCATGAAAACTCACCCGGAGTGGCAGGT...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATCAAGACGTTTGGAAGTaGCATCTTTTTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSASEKVRVQTTATCPYQDVWK*HLFGLQ Trigger: CTGGAGCCCAAAAAGATGGCACTTCCAAACGTCTTG...ATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGCATCGTGCTGGCTCCTaGTACATCATTTCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQRDVHNRMESSQHLRKHRAGS*YIISSK Trigger: CTTGCTAGAAATGATGTACCAGGAGCCAGCACGATG...CTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCTTTGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCCATACAAACCTGGGGTaGAGCCTGGAGATAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESHTNLG*SLEIDE Trigger: TTCATCTATCTCCAGGCTTCACCCCAGGTTTGTATG...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR GCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCTCACAAAGGTGGATTTaGCCACAGCGATGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESSQRWI*PQRCCL Trigger: AAGGCAACATCGCTGTGGGCAAATCCACCTTTGTGA...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | GCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACAATGTGTAGGACCATCGTaGTGGCTCCTGGTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASEKVRVQTTATCPYCLQCVGPS*WLLVHH Trigger: ATGATGTACCAGGAGCCAGCACGATGGTCCTACACA...TTGTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGAACTTCAAGAGCCTGCTaGTTTCTTTCTCCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVHNRMESSQHLRKSESRTSRAC*FLSPGV Trigger: CACCCCAGGAGAAAGAAAGCAGCAGGCTCTTGAAGT...TCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTCATCGTGCTGGCTCCTaGTACATCATTTCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQHLRKSESRPQPRVLIAHRAGS*YIISSK Trigger: CTTGCTAGAAATGATGTACCAGGAGCCAGCACGATG...AGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| 3UTR CAA 72 bp | GCAGTGCACTTTAGAGCTGGGCATTGTATCTGGGATTaGCCTATGAGCTCAGGGTTTTGGAGTGTGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: AVHFRAGHCIWD*PMSSGFWSVKC Trigger: GCATTTCACACTCCAAAACCCTGAGCTCATAGGCAAATCCCAGATACAATGCCCAGCTCTAAAGTGCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGGCCACTCGATGTCACTaGGGGAGCCATTTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QRDVHNRMESSQHLRKSEATRCH*GSHFQI Trigger: TATTTGAAAATGGCTCCCTCAGTGACATCGAGTGGC...CTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTAGCCACTCGATGTCACTaGGGGAGCCATTTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SASEKVRVQTTATCPYCLATRCH*GSHFQI Trigger: TATTTGAAAATGGCTCCCTCAGTGACATCGAGTGGC...TAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | TCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACAAGTTTGTGTAGGACCATCGTaGTGGCTCCTGGTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEKVRVQTTATCPYCLQVCVGPS*WLLVHH Trigger: ATGATGTACCAGGAGCCAGCACGATGGTCCTACACA...AACTTGTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACAAGTTCCATCGTGCTGGCTCCTaGTACATCATTTCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKSESRPQPRVLIAYKFHRAGS*YIISSK Trigger: CTTGCTAGAAATGATGTACCAGGAGCCAGCACGATG...GAACTTGTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCCTCATAAAGGTGTTCACTTGGTAGTCTTGTTAATAAACCAGTCTTCGGGAGTCTCCCTGGGATaGGCTCCAGCTGCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPHKGVHLVVLLINQSSGVSLG*APAAPS Trigger: TGAAGGTGCAGCTGGAGCCCATCCCAGGGAGACTCC...CGAAGACTGGTTTATTAACAAGACTACCAAGTGAACACCTTTATGAGGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTATTGCTTACAAGTTAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEKVRVQTTATCPYCLQVKPGDR*SRVTKA Trigger: GGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTT...AACTTGTAAGCAATAAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS-3UTR CCA 90 bp | AGGGATGTGCATAACAGGATGGAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCTACAAACCTCTGCCTTaGCGTTCATGCTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RDVHNRMESSQHLRKSESYKPLP*RSCFSS Trigger: AGATGAAAAGCATGAACGCCAAGGCAGAGGTTTGTA...GGACTCTGACTTTCTCAGATGCTGACTGCTCTCCATCCTGTTATGCACATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCGTGCTGACTATGTAGCTGTTGAAGATAGGCCAGCTCAATGCCCTTTTTTCATGCTTTTCATCTaGACACTTCAAGAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRADYVAVEDRPAQCPFFMLFI*TLQEPA Trigger: AGCAGGCTCTTGAAGTGTCCAGATGAAAAGCATGAA...AAAAGGGCATTGAGCTGGCCTATCTTCAACAGCTACATAGTCAGCACGAAGACT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| CDS-3UTR GCA 90 bp | CAAGTTCCTCATAAAGGTGTTCACTTGGTAGTCTTGTTAATAAACCAGTCTTCGGACACTTCAAGAGCCTaGTGCTTTCTTTCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPHKGVHLVVLLINQSSDTSRA*CFLSPG Trigger: CCCAGGAGAAAGAAAGCAGCAGGCTCTTGAAGTGTC...CGAAGACTGGTTTATTAACAAGACTACCAAGTGAACACCTTTATGAGGAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138941.3 |
||
| 3UTR CAA 72 bp | GCATTGTATCTGGGATTTGCCTATGAGCTCAGGGTTTaGGAGTGTGAAATGCAATTTGAAGCACAAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALYLGFAYELRV*ECEMQFEAQSN Trigger: GTTGCTTTGTGCTTCAAATTGCATTTCACACTCCAAAACCCTGAGCTCATAGGCAAATCCCAGATACAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS CCA 90 bp | TGTTGCCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCGTCGTGCATaGCCCTGGCGTGTGGCGCGTCCACGAGCGCGTTCCGCAGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCLQCRAFGGRPRRA*PWRVARPRARSAAG Trigger: CCCCGCTGCGGAACGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS GCA 90 bp | GCGATGTTGCCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCGTCGTaGATGGCCCTGGCGTGTGGCGCGTCCACGAGCGCGTTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AMLPSMQSLRGPPPS*MALACGASTSAFRS Trigger: GCTGCGGAACGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS GCA 90 bp | CCGATGTTGCCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCGTCGTaGATGGCCCTGGCGTGTGGCGCGTCCACGAGCGCGTTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PMLPSMQSLRGPPPS*MALACGASTSAFRS Trigger: GCTGCGGAACGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS GCA 90 bp | CAAGTTTCCAAGACGTTTGGAAGTGCCATCCGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGCCCCCGTCGTGCATGGCCCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QVSKTFGSAIRCCLQ*RAFGGRPRRAWPWR Trigger: ACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTTGGAAACTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS-3UTR CAA 90 bp | AACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGCGGAAGTGCCATCTTTTaGGGCTCCAGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NNGSTKTAHTQVWGCMRGGSAIF*GSSSLN Trigger: ATTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCC...GCCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR CAA 90 bp | AAACAATGGCAGTACAAAGACAGCACACACCCAGGTGTGGGGGTGCATGAGGGGGGAAGTGCCATCTTTTaGGGCTCCAGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KQWQYKDSTHPGVGVHEGGSAIF*GSSSLN Trigger: ATTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCC...CCCCTCATGCACCCCCACACCTGGGTGTGTGCTGTCTTTGTACTGCCATTGTTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGTCAGCATCTGAGAAAGTCAGAGTCCAGACCACAGCCACGTGTCCTTGGAAGTGCCATCTTTTaGGGCTCCAGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ESSQHLRKSESRPQPRVLGSAIF*GSSSLN Trigger: ATTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCC...AAGGACACGTGGCTGTGGTCTGGACTCTGACTTTCTCAGATGCTGACTGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS TCA 90 bp | TTCTGCCACTCTGCTATAGGTTCTGTCGCCACCTGCCACTCCGGGTaGGTTTTCATGAGTAACTTCACAAAGGTGGATTTGCCCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FCHSAIGSVATCHSG*VFMSNFTKVDLPTA Trigger: CGCTGTGGGCAAATCCACCTTTGTGAAGTTACTCATGAAAACTCACCCGGAGTGGCAGGTGGCGACAGAACCTATAGCAGAGTGGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS GCA 90 bp | AGTGCCATCTTTTTGGGCTCCAGCAGCCTGAATATTCTGCCACTCTaGTATAGGTTCTGTCGCCACCTGCCACTCCGGGTGAGTTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAIFLGSSSLNILPL*YRFCRHLPLRVSFH Trigger: ATGAAAACTCACCCGGAGTGGCAGGTGGCGACAGAACCTATAGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCAAAAAGATGGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS TCA 90 bp | TTTCCAAGACGTTTGGAAGTGCCATCTTTTTGGGCTCCAGCAGCCTaGATATTCTGCCACTCTGCTATAGGTTCTGTCGCCACCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPRRLEVPSFWAPAA*IFCHSAIGSVATCH Trigger: GTGGCAGGTGGCGACAGAACCTATAGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCCAAACGTCTTGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS TCA 90 bp | GGTAGAGTCTCTCCATACAAACCTGGGGTGAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCCGGTTTGCGAACTCCTGCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRVSPYKPGVKPGDR*SRVTKAGLRTPAGE Trigger: TTCTCCTGCAGGAGTTCGCAAACCGGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTTCACCCCAGGTTTGTATGGAGAGACTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
||
| CDS GCA 90 bp | TCAGAGAAGTCTTCAGTGACATCCAGCACCAGCACTGGCACGTGCTaGAGAGCTTCGAAGTGGAGCTTGGTAGTCTTGTTAATAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SEKSSVTSSTSTGTC*RASKWSLVVLLINQ Trigger: CTGGTTTATTAACAAGACTACCAAGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCTGGATGTCACTGAAGACTTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS GCA 90 bp | TACAAGTTCCTCATAAAGGTGTTCACCTGTCCCATGAGCTCTTCCTaGCTGGCGGCATTTTCAGAGAAGTCTTCAGTGACATCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: YKFLIKVFTCPMSSS*LAAFSEKSSVTSST Trigger: GGTGCTGGATGTCACTGAAGACTTCTCTGAAAATGCCGCCAGGCAGGAAGAGCTCATGGGACAGGTGAACACCTTTATGAGGAACTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
||
| CDS CCA 72 bp | AGAGCCTTCGGGGGCCGCCCCCGTCGTGCATGGCCCTaGCGTGTGGCGCGTCCACGAGCGCGTTCCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RAFGGRPRRAWP*RVARPRARSAA Trigger: CGCTGCGGAACGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | CCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCGTCGTaGATGGCCCTGGCGTGTGGCGCGTCCACGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSMQSLRGPPPS*MALACGASTSA Trigger: CGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS CCA 72 bp | CAATGCAGAGCCTTCGGGGGCCGCCCCCGTCGTGCATaGCCCTGGCGTGTGGCGCGTCCACGAGCGCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QCRAFGGRPRRA*PWRVARPRARS Trigger: GGAACGCGCTCGTGGACGCGCCACACGCCAGGGCCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | CAAAGGTGGATTTGCCCACAGCGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGCCCCCGTCGTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: QRWICPQRCCLQ*RAFGGRPRRAW Trigger: CCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGCTGTGGGCAAATCCACCTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS GCA 72 bp | ACAGACCTCTCAAAGACCCGCACAGACTTCTCTGCCTaGAGGAGTCTCCCTGGGATGGGCTCCAGCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TDLSKTRTDFSA*RSLPGMGSSCT Trigger: GGTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGGGTCTTTGAGAGGTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS GCA 72 bp | AAGACGTTTGGAAGTGCCATCCGATGTTGCCTTCAATaGAGAGCCTTCGGGGGCCGCCCCCGTCGTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KTFGSAIRCCLQ*RAFGGRPRRAW Trigger: CCATGCACGACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | TCTGCCTGCAGGAGTCTCCCTGGGATGGGCTCCAGCTaGACCTTCAGACGGCTCATGAAAGAAAGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SACRSLPGMGSS*TFRRLMKERVW Trigger: CCAGACCCTTTCTTTCATGAGCCGTCTGAAGGTGCAGCTGGAGCCCATCCCAGGGAGACTCCTGCAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | GTACACAGACCTCTCAAAGACCCGCACAGACTTCTCTaGCTGCAGGAGTCTCCCTGGGATGGGCTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VHRPLKDPHRLL*LQESPWDGLQL Trigger: CAGCTGGAGCCCATCCCAGGGAGACTCCTGCAGGCAGAGAAGTCTGTGCGGGTCTTTGAGAGGTCTGTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS CAA 72 bp | GCAAGTTTCCAAGACGTTTGGAAGTGCCATCCGATGTaGCCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASFQDVWKCHPM*PSMQSLRGPPP Trigger: CGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTTGGAAACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | CAAGTTTCCAAGACGTTTGGAAGTGCCATCCGATGTTaGCTTCAATGCAGAGCCTTCGGGGGCCGCCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: QVSKTFGSAIRC*LQCRAFGGRPR Trigger: ACGGGGGCGGCCCCCGAAGGCTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTTGGAAACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
||
| CDS GCA 72 bp | TTTTTGGGCTCCAGCAGCCTGAATATTCTGCCACTCTaGTATAGGTTCTGTCGCCACCTGCCACTCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLGSSSLNILPL*YRFCRHLPLRV Trigger: CACCCGGAGTGGCAGGTGGCGACAGAACCTATAGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS TCA 72 bp | GTTCTGTCGCCACCTGCCACTCCGGGTGAGTTTTCATaGGTAACTTCACAAAGGTGGATTTGCCCACAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VLSPPATPGEFS*VTSQRWICPQR Trigger: TCGCTGTGGGCAAATCCACCTTTGTGAAGTTACTCATGAAAACTCACCCGGAGTGGCAGGTGGCGACAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
||
| CDS TCA 72 bp | CGTTTGGAAGTGCCATCTTTTTGGGCTCCAGCAGCCTaGATATTCTGCCACTCTGCTATAGGTTCTGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: RLEVPSFWAPAA*IFCHSAIGSVA Trigger: GGCGACAGAACCTATAGCAGAGTGGCAGAATATTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCCAAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
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| CDS CCA 72 bp | AGCACCAGCACTGGCACGTGCTGCAGAGCTTCGAAGTaGAGCTTGGTAGTCTTGTTAATAAACCAGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: STSTGTCCRASK*SLVVLLINQSS Trigger: CGAAGACTGGTTTATTAACAAGACTACCAAGCTCCACTTCGAAGCTCTGCAGCACGTGCCAGTGCTGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
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| CDS TCA 72 bp | TCTCCATACAAACCTGGGGTGAAGCCTGGAGATAGATaGAGCCGTGTAACAAAAGCCGGTTTGCGAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPYKPGVKPGDR*SRVTKAGLRTP Trigger: AGGAGTTCGCAAACCGGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTTCACCCCAGGTTTGTATGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 |
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| CDS GCA 72 bp | CTCATAAAGGTGTTCACCTGTCCCATGAGCTCTTCCTaGCTGGCGGCATTTTCAGAGAAGTCTTCAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: LIKVFTCPMSSS*LAAFSEKSSVT Trigger: TGTCACTGAAGACTTCTCTGAAAATGCCGCCAGGCAGGAAGAGCTCATGGGACAGGTGAACACCTTTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014698.10 |
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| CDS TCA 72 bp | TCTGCTATAGGTTCTGTCGCCACCTGCCACTCCGGGTaGGTTTTCATGAGTAACTTCACAAAGGTGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: SAIGSVATCHSG*VFMSNFTKVDL Trigger: CAAATCCACCTTTGTGAAGTTACTCATGAAAACTCACCCGGAGTGGCAGGTGGCGACAGAACCTATAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
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| CDS CCA 72 bp | CCTGGTACATCATTTCTAGCAAGTTTCCAAGACGTTTaGAAGTGCCATCTTTTTGGGCTCCAGCAGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PGTSFLASFQDV*KCHLFGLQQPE Trigger: TTCAGGCTGCTGGAGCCCAAAAAGATGGCACTTCCAAACGTCTTGGAAACTTGCTAGAAATGATGTACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014698.10 ENSMUST00000113888.3 ENSMUST00000138941.3 |
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| CDS CCA 72 bp | CCTGGTACATCATTTCTAGCAAGTTTCCAAGACGTTTaGAAGTGCCATCCGATGTTGCCTTCAATGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PGTSFLASFQDV*KCHPMLPSMQS Trigger: GCTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTTGGAAACTTGCTAGAAATGATGTACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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| CDS CAA 72 bp | TCCTGGTACATCATTTCTAGCAAGTTTCCAAGACGTTaGGAAGTGCCATCCGATGTTGCCTTCAATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SWYIISSKFPRR*EVPSDVAFNAE Trigger: CTCTGCATTGAAGGCAACATCGGATGGCACTTCCAAACGTCTTGGAAACTTGCTAGAAATGATGTACCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145455.8 |
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