RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034731

Ensembl transcript IDs: ENSMUST00000074729.6, ENSMUST00000226342.3, ENSMUST00000227537.2, ENSMUST00000227767.2, ENSMUST00000228362.2

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATGTGCCAGCTCCTGCTCCAGGAGACA +
Preference number: 1 (lower is better)
Translates to: FQVLREAWVGFVQGV*AGIHCMCQLLLQET
Trigger: TGTCTCCTGGAGCAGGAGCTGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 90 bp CCCGCTCTTCGTGAGGAGATTCCAAGTGCTCCGGGAAGCGTGGGTTaGCTTTGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGTGCCA +
Preference number: 1 (lower is better)
Translates to: PALREEIPSAPGSVG*LCSGRVSRHSLHVP
Trigger: TGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATCTCCTCACGAAGAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 90 bp AGAAGCAGAGCTAAAGGGGAGCAGGGCAAGCAAGACTGGGCTTCCTaGTCGGCCCTTTGCTCCCCTGCACTGTGCTCAATCAGCCATTCT +
Preference number: 1 (lower is better)
Translates to: RSRAKGEQGKQDWAS*SALCSPALCSISHS
Trigger: AGAATGGCTGATTGAGCACAGTGCAGGGGAGCAAAGGGCCGATCAGGAAGCCCAGTCTTGCTTGCCCTGCTCCCCTTTAGCTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp AGCTCCATCTCCACAGAGTGTAAGGCACTGGACACCCGCTCTTCGTaGGGAGATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTC +
Preference number: 1 (lower is better)
Translates to: SSISTECKALDTRSS*GDSKCSGKRGLALF
Trigger: GAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGAGATGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR GCA 90 bp ATCCAGTTCTGTTTCCTTCCTGGGGTAGGGGGAGTGCACAGGAAATaGTTTGGAGGACAGCAGAGCCAGCTACAGTCGGGTGCACACCTG +
Preference number: 1 (lower is better)
Translates to: IQFCFLPGVGGVHRK*FGGQQSQLQSGAHL
Trigger: CAGGTGTGCACCCGACTGTAGCTGGCTCTGCTGTCCTCCAAAGCATTTCCTGTGCACTCCCCCTACCCCAGGAAGGAAACAGAACTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp CTTTCTGGGAGGAGGGTTTCCCAATGTCATTCACCAGCTGGTCCTTaGTTTCACCCAAGGACTCGTCACTGGCGGACTCCACGGTGTCCT +
Preference number: 1 (lower is better)
Translates to: LSGRRVSQCHSPAGP*FHPRTRHWRTPRCP
Trigger: AGGACACCGTGGAGTCCGCCAGTGACGAGTCCTTGGGTGAAAGCAAGGACCAGCTGGTGAATGACATTGGGAAACCCTCCTCCCAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 90 bp GTTCTGTTTCCTTCCTGGGGTAGGGGGAGTGCACAGGAAATGCTTTaGAGGACAGCAGAGCCAGCTACAGTCGGGTGCACACCTGAGCAT +
Preference number: 1 (lower is better)
Translates to: VLFPSWGRGSAQEML*RTAEPATVGCTPEH
Trigger: ATGCTCAGGTGTGCACCCGACTGTAGCTGGCTCTGCTGTCCTCCAAAGCATTTCCTGTGCACTCCCCCTACCCCAGGAAGGAAACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp GCCACAGCAGAAACAAGGGAGAGGAAGGGCTTCTCTCCCTTGGGGTaGGCAGTGAGAATAAGGGAAACCAGGAAGCCAATGGCAAAGCCG +
Preference number: 1 (lower is better)
Translates to: ATAETRERKGFSPLG*AVRIRETRKPMAKP
Trigger: CGGCTTTGCCATTGGCTTCCTGGTTTCCCTTATTCTCACTGCCCACCCCAAGGGAGAGAAGCCCTTCCTCTCCCTTGTTTCTGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp CCTTCCAACCTCCTGAACCAAGATCCACTACTGGCTGCTCTGCGTTaGGAAAGCACAGGCAGCTCTGCCCTGGGAATAAACATCGCCAGA +
Preference number: 1 (lower is better)
Translates to: PSNLLNQDPLLAALR*ESTGSSALGINIAR
Trigger: TCTGGCGATGTTTATTCCCAGGGCAGAGCTGCCTGTGCTTTCTCAACGCAGAGCAGCCAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp TCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAGGAGATTCCAAGTGCTCCGGGAAGC +
Preference number: 1 (lower is better)
Translates to: SPLTSEAPSPQSVRH*TPALREEIPSAPGS
Trigger: GCTTCCCGGAGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR GCA 90 bp GCACAGGAAATGCTTTGGAGGACAGCAGAGCCAGCTACAGTCGGGTaGACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGAT +
Preference number: 1 (lower is better)
Translates to: AQEMLWRTAEPATVG*TPEHLSLLKWMWLD
Trigger: ATCCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAGCTGGCTCTGCTGTCCTCCAAAGCATTTCCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp CGAAGGATGGGCAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTaGACTCCAGTCTCCCTGATTGGGAAGCAAGTATTCTTAGTTGCA +
Preference number: 1 (lower is better)
Translates to: RRMGRMLRPAMSAGT*TPVSLIGKQVFLVA
Trigger: TGCAACTAAGAATACTTGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCCCATCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp AGAGAGGAGCCAATGCCTTCACTGGGAAGCCTGCGAAGTTCCAGCTaGATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGT +
Preference number: 1 (lower is better)
Translates to: REEPMPSLGSLRSSS*ILLTQLQAHIGTSC
Trigger: ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGCAGGCTTCCCAGTGAAGGCATTGGCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR GCA 90 bp ATGGTCAGGAACGCACTAGGTTTGCCTGTTGATCCCTTTGGATTTTaGTCTGCTATGGGTGGAGCCAAGCCCCTTGCCTGTCCTAAGCAA +
Preference number: 1 (lower is better)
Translates to: MVRNALGLPVDPFGF*SAMGGAKPLACPKQ
Trigger: TTGCTTAGGACAGGCAAGGGGCTTGGCTCCACCCATAGCAGAGCAAAATCCAAAGGGATCAACAGGCAAACCTAGTGCGTTCCTGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp CGTAATGAACGTGCTGGGCAGAAGGGTGCAGCGCCCAGCCTTCCCTaGCCCCTTCTTTTGTGGAACATTTACAAAGTTGAGCTAAGCATA +
Preference number: 1 (lower is better)
Translates to: RNERAGQKGAAPSLP*PLLLWNIYKVELSI
Trigger: TATGCTTAGCTCAACTTTGTAAATGTTCCACAAAAGAAGGGGGCAGGGAAGGCTGGGCGCTGCACCCTTCTGCCCAGCACGTTCATTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp CACAGGTGTCCAGCGGCTAAAACACCAGACAGCACAGATCTGACCTaGACATCCACTGTTTCCACCTTCTCAACCACAGCAGTGTTTCCA +
Preference number: 1 (lower is better)
Translates to: HRCPAAKTPDSTDLT*TSTVSTFSTTAVFP
Trigger: TGGAAACACTGCTGTGGTTGAGAAGGTGGAAACAGTGGATGTCCAGGTCAGATCTGTGCTGTCTGGTGTTTTAGCCGCTGGACACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp ATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTaGGTGAGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACC +
Preference number: 1 (lower is better)
Translates to: ITTTGSGFQGLCIEW*VRTSLPRNSTSVTT
Trigger: GGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCTCACTCACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR TCA 90 bp CTAGCAGCAGAAGCAGCAGAGTGCAGGGCTAGTGAGGCCCACTCTTaGTCAGCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACA +
Preference number: 1 (lower is better)
Translates to: LAAEAAECRASEAHS*SATARTVADRKIYT
Trigger: TGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGCTGATCAAGAGTGGGCCTCACTAGCCCTGCACTCTGCTGCTTCTGCTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp AGGTATCATTACCAATGTGACAGAGACTGTGACACAGAAGTCACCTaGGGGATGCCACAGCAGAAACAAGGGAGAGGAAGGGCTTCTCTC +
Preference number: 1 (lower is better)
Translates to: RYHYQCDRDCDTEVT*GMPQQKQGRGRASL
Trigger: GAGAGAAGCCCTTCCTCTCCCTTGTTTCTGCTGTGGCATCCCTCAGGTGACTTCTGTGTCACAGTCTCTGTCACATTGGTAATGATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp TTGGTGAGTCCTGTCAGTAATCACCTCAGTCCCCAGAACTCAGGCTaGGATCTCAGCCACGACCTTGAAAAATTCCTGGATGTCAAGTCT +
Preference number: 1 (lower is better)
Translates to: LVSPVSNHLSPQNSG*DLSHDLEKFLDVKS
Trigger: AGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGACTGAGGTGATTACTGACAGGACTCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp TCACCTCAGTCCCCAGAACTCAGGCTGGGATCTCAGCCACGACCTTaGAAAATTCCTGGATGTCAAGTCTTACAAGTGCAAGCAGAAACT +
Preference number: 1 (lower is better)
Translates to: SPQSPELRLGSQPRP*KIPGCQVLQVQAET
Trigger: AGTTTCTGCTTGCACTTGTAAGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGACTGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp AGATGGAGGTCAGAGGACAAGTCCACAAGTGTTTCTCTTTCCACTTaGATATGGCATCTGGCATCAAACCTGTTGCCAGACCTGCTGAGC +
Preference number: 1 (lower is better)
Translates to: RWRSEDKSTSVSLST*IWHLASNLLPDLLS
Trigger: GCTCAGCAGGTCTGGCAACAGGTTTGATGCCAGATGCCATATTCAAGTGGAAAGAGAAACACTTGTGGACTTGTCCTCTGACCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp CAGAAAGAGTGCAGGCCTCACACCTTCCAATGCAGTCTTTTTATTTaGGAAGGTCGATCTGAAGGCAGTGCCCTTTGGGAAAGACGTCTC +
Preference number: 1 (lower is better)
Translates to: QKECRPHTFQCSLFI*EGRSEGSALWERRL
Trigger: GAGACGTCTTTCCCAAAGGGCACTGCCTTCAGATCGACCTTCTCAAATAAAAAGACTGCATTGGAAGGTGTGAGGCCTGCACTCTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp CAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTaGAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTA +
Preference number: 1 (lower is better)
Translates to: QQNISRERCFRGAYL*SKSQQQAAASKDSV
Trigger: TACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CCA 90 bp TGTTGTTTCTTTTGGTACAATCCAGAGGAGGCTCCTCGTCCTCACTaGGGCGGAGGATGTAATAAAGCCAGGGAATCTCCGTTAACTTCT +
Preference number: 1 (lower is better)
Translates to: CCFFWYNPEEAPRPH*GGGCNKARESPLTS
Trigger: AGAAGTTAACGGAGATTCCCTGGCTTTATTACATCCTCCGCCCCAGTGAGGACGAGGAGCCTCCTCTGGATTGTACCAAAAGAAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 90 bp GGGTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATaGCCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: GFRSSSLIPWRIRFI*PTFGIPRSLRSRLS
Trigger: GGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
3UTR TCA 90 bp TGCACTGTGCTCAATCAGCCATTCTTGAGGCAAAGTCCTAGAGACTaGTCCACAAAGCACATTTGTGTCTCTGTACTCTGGGATGTGAGA +
Preference number: 1 (lower is better)
Translates to: CTVLNQPFLRQSPRD*STKHICVSVLWDVR
Trigger: TCTCACATCCCAGAGTACAGAGACACAAATGTGCTTTGTGGATCAGTCTCTAGGACTTTGCCTCAAGAATGGCTGATTGAGCACAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp TTGTCTGCGCCAACAGTCTGCATTGCTATAAGCTTCCAGATAACATaGATGCTGACTGATAGATGGCCCATGGACCACAGATTTAGTAGC +
Preference number: 1 (lower is better)
Translates to: LSAPTVCIAISFQIT*MLTDRWPMDHRFSS
Trigger: GCTACTAAATCTGTGGTCCATGGGCCATCTATCAGTCAGCATCCATGTTATCTGGAAGCTTATAGCAATGCAGACTGTTGGCGCAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp TTTAGCTTCATCTGTTTCTGTATCATAGTCACAAGACGGACTGACTaGCTCAGAGGGCTGCACTGCTGGCTCATCCATAACTTTTTCAGC +
Preference number: 1 (lower is better)
Translates to: FSFICFCIIVTRRTD*LRGLHCWLIHNFFS
Trigger: GCTGAAAAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAGCCAGTCAGTCCGTCTTGTGACTATGATACAGAAACAGATGAAGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 90 bp AGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGTCATaGCGGATGAAGATTTCTTTGTACTCTCCCAAATTGAGCAGATCC +
Preference number: 1 (lower is better)
Translates to: RSRLSRCKSSAPLTS*RMKISLYSPKLSRS
Trigger: GGATCTGCTCAATTTGGGAGAGTACAAAGAAATCTTCATCCGTCATGACGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 90 bp CCCAGAACTCAGGCTGGGATCTCAGCCACGACCTTGAAAAATTCCTaGATGTCAAGTCTTACAAGTGCAAGCAGAAACTCAAAATGGTTA +
Preference number: 1 (lower is better)
Translates to: PRTQAGISATTLKNS*MSSLTSASRNSKWL
Trigger: TAACCATTTTGAGTTTCTGCTTGCACTTGTAAGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp TTCCACTTGGTTGTTGTTGTTGTTTGTACTACGCACTGTTGGGAGTaGACCAGGGTTTCACACTTGCAGTATAAACACTCTTCCACTGAG +
Preference number: 1 (lower is better)
Translates to: FHLVVVVVCTTHCWE*TRVSHLQYKHSSTE
Trigger: CTCAGTGGAAGAGTGTTTATACTGCAAGTGTGAAACCCTGGTTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAACCAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp TCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTaGAAGTGTCATGAATTTGTGCCTTCCCCAAATAAACCTGAGATT +
Preference number: 1 (lower is better)
Translates to: SILSCGSAMSPHVFC*KCHEFVPSPNKPEI
Trigger: AATCTCAGGTTTATTTGGGGAAGGCACAAATTCATGACACTTTCAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp TTGTTTGTACTACGCACTGTTGGGAGTGAACCAGGGTTTCACACTTaGAGTATAAACACTCTTCCACTGAGACACTTGCCTTCCACTTTT +
Preference number: 1 (lower is better)
Translates to: LFVLRTVGSEPGFHT*SINTLPLRHLPSTF
Trigger: AAAAGTGGAAGGCAAGTGTCTCAGTGGAAGAGTGTTTATACTGCAAGTGTGAAACCCTGGTTCACTCCCAACAGTGCGTAGTACAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp AGTTCTGCATTTAAAAATATGTACCTATTATTGTGTGTATGTGGGTaGGGATGCCATGGTGGGAAGATGGAGGTCAGAGGACAAGTCCAC +
Preference number: 1 (lower is better)
Translates to: SSAFKNMYLLLCVCG*GCHGGKMEVRGQVH
Trigger: GTGGACTTGTCCTCTGACCTCCATCTTCCCACCATGGCATCCTCACCCACATACACACAATAATAGGTACATATTTTTAAATGCAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp TCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTaGTTCAGAGGTGCTTATCTGTGCAGTAAATCACAACAACAGGCA +
Preference number: 1 (lower is better)
Translates to: SNQNFHPQQNISRER*FRGAYLCSKSQQQA
Trigger: TGCCTGTTGTTGTGATTTACTGCACAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR GCA 90 bp TGGCAGGCTACACTATCAAAACCGCCTTCACTGGGTCAGCAGCCCTaGTTGCTTCTCTTATATACACAACTTTCAAATATTACAGTTGAT +
Preference number: 1 (lower is better)
Translates to: WQATLSKPPSLGQQP*LLLLYTQLSNITVD
Trigger: ATCAACTGTAATATTTGAAAGTTGTGTATATAAGAGAAGCAAGCAGGGCTGCTGACCCAGTGAAGGCGGTTTTGATAGTGTAGCCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp GCACTGATTTATACAACCATTCTAAGTAATACTGTCAAGGGACAATaGTCACGTCAGCACTGCCCTGCAGAGAGAAAATCAAAGGTACAA +
Preference number: 1 (lower is better)
Translates to: ALIYTTILSNTVKGQ*SRQHCPAERKSKVQ
Trigger: TTGTACCTTTGATTTTCTCTCTGCAGGGCAGTGCTGACGTGAGCATTGTCCCTTGACAGTATTACTTAGAATGGTTGTATAAATCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp TTACTTGATAGAAATAAGCAAAAGTTATCCACCGTGGGTTCCATTTaGAGTGTAGCCCAAAGCCAGGAAACGGGTTTTGAATGTAGACTC +
Preference number: 1 (lower is better)
Translates to: LLDRNKQKLSTVGSI*SVAQSQETGFECRL
Trigger: GAGTCTACATTCAAAACCCGTTTCCTGGCTTTGGGCTACACTGCAAATGGAACCCACGGTGGATAACTTTTGCTTATTTCTATCAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 90 bp TCAGGATTTCATGAGTCAGAATGCATAAAAGGTGTCAGCGGGAACTaGAAAGATTACCAAACAAAAAGCAGCCAATCATTGTGCACCTCT +
Preference number: 1 (lower is better)
Translates to: SGFHESECIKGVSGN*KDYQTKSSQSLCTS
Trigger: AGAGGTGCACAATGATTGGCTGCTTTTTGTTTGGTAATCTTTTCAGTTCCCGCTGACACCTTTTATGCATTCTGACTCATGAAATCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp AACACTCTTCCACTGAGACACTTGCCTTCCACTTTTGTTTGTAAATaGAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGAA +
Preference number: 1 (lower is better)
Translates to: NTLPLRHLPSTFVCK*NVKGYQIGCLFFME
Trigger: TTCCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAAAAGTGGAAGGCAAGTGTCTCAGTGGAAGAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 90 bp CTACCATCAAAGACTAAATGTCACACAACCTCCTTCTCCCTGGTTTaGTTACATATTGAACTGCATTATTCTACTTTGATAGCATCAGTT +
Preference number: 1 (lower is better)
Translates to: LPSKTKCHTTSFSLV*LHIELHYSTLIASV
Trigger: AACTGATGCTATCAAAGTAGAATAATGCAGTTCAATATGTAAGCAAACCAGGGAGAAGGAGGTTGTGTGACATTTAGTCTTTGATGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 90 bp TTAGTTGCAGAGGCATCTCTTATAACATCAAGGGCTTATTTCTATTaGGGGAAACCAAATTGTGTTTTGAACATTAATAACTCCACTGCA +
Preference number: 1 (lower is better)
Translates to: LVAEASLITSRAYFY*GKPNCVLNINNSTA
Trigger: TGCAGTGGAGTTATTAATGTTCAAAACACAATTTGGTTTCCCCCAATAGAAATAAGCCCTTGATGTTATAAGAGATGCCTCTGCAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGGGGATGGCCACAGCTTaGCTGGGCATCAGGAGACTG +
Preference number: 2 (lower is better)
Translates to: DSKCSGKRGLALFRACEQGMATA*LGIRRL
Trigger: CAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCC...CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp GACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGACTGGCTCAGAGGGCTaGACTGCTGGCTCATCCATA +
Preference number: 2 (lower is better)
Translates to: DQRQSQFGDGHSLPGHQETGSEG*TAGSSI
Trigger: TATGGATGAGCCAGCAGTGCAGCCCTCTGAGCCAGT...CTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp GCTTTCTGGGAGGAGGGTTTCCCAATGTCATTCACCAGCTGGTCCTaGCTTTCACCCAAGGACTCGTCACTGGCGGACTCCACGGTGTCC +
Preference number: 2 (lower is better)
Translates to: AFWEEGFPMSFTSWS*LSPKDSSLADSTVS
Trigger: GGACACCGTGGAGTCCGCCAGTGACGAGTCCTTGGGTGAAAGCAAGGACCAGCTGGTGAATGACATTGGGAAACCCTCCTCCCAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp CCATGGCTGGACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTaGCCTGGGCATCAGGAGACTGAGATGTGGTTTTGGCTGATAGCG +
Preference number: 2 (lower is better)
Translates to: PWLDQRQSQFGDGHS*PGHQETEMWFWLIA
Trigger: CGCTATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp AGACTGTTGGCCCGCAGCATTATCTCCCGGGGCTTCACGGCTTTCTGGGAGGAGGAAATAGCACCAGTGTaGCCACCCCTCAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: RLLARSIISRGFTAFWEEEIAPV*PPLRPS
Trigger: ACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTC...CTCCTCCCAGAAAGCCGTGAAGCCCCGGGAGATAATGCTGCGGGCCAACAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp GATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGGGAGGCAGCAAGTCCTaGTCTCAAACCTGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: DSKCSGKRGLALFRACEQGGSKS*SQTWAD
Trigger: ATCTGCCCAGGTTTGAGAGCAGGACTTGCTGCCTCC...CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp GTTTTCTTTGGTGGTGGCCATGGCTGGACCAGCGACAGAGTCAGTTaGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGACTGAGATGT +
Preference number: 2 (lower is better)
Translates to: VFFGGGHGWTSDRVS*GMATACLGIRRLRC
Trigger: ACATCTCAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATGGCCCTTTGCTCCCCTaGACTGTGCTCAATCAGCCA +
Preference number: 2 (lower is better)
Translates to: QDAQACYECWDLNSSLPDGPLLP*TVLNQP
Trigger: TGGCTGATTGAGCACAGTGCAGGGGAGCAAAGGGCC...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp AGGGATGCCACAGCAGAAACAAGGGAGAGGAAGGGCTTCTCTCCCTaGGGGTGGGCAGTGAGAATAAGGGAAACCAGGAAGCCAATGGCA +
Preference number: 2 (lower is better)
Translates to: RDATAETRERKGFSP*GWAVRIRETRKPMA
Trigger: TGCCATTGGCTTCCTGGTTTCCCTTATTCTCACTGCCCACCCCAAGGGAGAGAAGCCCTTCCTCTCCCTTGTTTCTGCTGTGGCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp GCCTTCCAACCTCCTGAACCAAGATCCACTACTGGCTGCTCTGCGTaGAGAAAGCACAGGCAGCTCTGCCCTGGGAATAAACATCGCCAG +
Preference number: 2 (lower is better)
Translates to: AFQPPEPRSTTGCSA*RKHRQLCPGNKHRQ
Trigger: CTGGCGATGTTTATTCCCAGGGCAGAGCTGCCTGTGCTTTCTCAACGCAGAGCAGCCAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGGTATTGAGTGGTGAGTaGGGACTTCTCTTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: DQRQSQFGDGHSLPGHQEVLSGE*GLLFPE
Trigger: TTCTGGGAAGAGAAGTCCTCACTCACCACTCAATAC...CTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CCA 90 bp AGGTGTCCAGCGGCTAAAACACCAGACAGCACAGATCTGACCTGGACATCCACTCCCCAGAACTCAGGCTaGGATCTCAGCCACGACCTT +
Preference number: 2 (lower is better)
Translates to: RCPAAKTPDSTDLTWTSTPQNSG*DLSHDL
Trigger: AAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGG...AGTGGATGTCCAGGTCAGATCTGTGCTGTCTGGTGTTTTAGCCGCTGGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp GACACTTCCTCTGTTGCCAGGTCAGGGGCGGGATGGATGTACAGGTaGGTTCGAAGAACTGGCTTCCCAGAGTCACACTTCTGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: DTSSVARSGAGWMYR*VRRTGFPESHFCLS
Trigger: AGACAAGCAGAAGTGTGACTCTGGGAAGCCAGTTCTTCGAACCAACCTGTACATCCATCCCGCCCCTGACCTGGCAACAGAGGAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCGTCTCGGGAGCACACTaGTGTGTGTCCAGTGTCGGA +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSVSGAH*CVSSVG
Trigger: TCCGACACTGGACACACAGCAGTGTGCTCCCGAGAC...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATTGGGCCGTGTCATTCTaGCAAGGTACTAAACCCCCA +
Preference number: 2 (lower is better)
Translates to: QDAQACYECWDLNSSLPDWAVSF*QGTKPP
Trigger: TGGGGGTTTAGTACCTTGGCAGAATGACACGGCCCA...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp AAACCTGGGCAGATGATTCTAGTGTTGAGCACAGGGAGGTTTTCTTaGGTGGTGGCCATGGCTGGACCAGCGACAGAGTCAGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: KPGQMILVLSTGRFS*VVAMAGPATESVWG
Trigger: TCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAGAAAACCTCCCTGTGCTCAACACTAGAATCATCTGCCCAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp GGCATCAAACCTGTTGCCAGACCTGCTGAGCCATCTTGTCTGCGCCAACAGTCTAAGACCCTCACTGGATaGTGGGCAAACAAGTCCACT +
Preference number: 2 (lower is better)
Translates to: GIKPVARPAEPSCLRQQSKTLTG*WANKST
Trigger: AGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTT...AGACTGTTGGCGCAGACAAGATGGCTCAGCAGGTCTGGCAACAGGTTTGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCCCCCTCAGACCAAGTTaGGAGGGTTCCGTTCAAGCT +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSPLRPS*EGSVQA
Trigger: AGCTTGAACGGAACCCTCCCAACTTGGTCTGAGGGG...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGACACTCTTTATAGACTaGAGTCCTCTCCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWTLFID*SPLPTP
Trigger: GGGGGTGGGGAGAGGACTCCAGTCTATAAAGAGTGT...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp TCGAAGGATGGGCAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTaGAACTCCAGTCTCCCTGATTGGGAAGCAAGTATTCTTAGTTGC +
Preference number: 2 (lower is better)
Translates to: SKDGQDAQACYECWD*NSSLPDWEASILSC
Trigger: GCAACTAAGAATACTTGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCCCATCCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp TTTTCAGCTTCTTCAATGACTTGCCTCACCGCTTTCTTTAGACTGTaGGCCCGCAGCATTATCTCCCGGGGCTTCACGGCTTTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: FSASSMTCLTAFFRL*ARSIISRGFTAFWE
Trigger: CTCCCAGAAAGCCGTGAAGCCCCGGGAGATAATGCTGCGGGCCAACAGTCTAAAGAAAGCGGTGAGGCAAGTCATTGAAGAAGCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp CTCCTGCTCCAGGAGACAGTGAATCGTGGCTGCGTCACAAATCCTAGTGATGAGCCCAAGACTTCAGGGTaGTTTCAAAGGCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LLLQETVNRGCVTNPSDEPKTSG*FQRLCL
Trigger: GAGACAGAGCCTTTGAAAGCACCCTGAAGTCTTGGG...CTCATCACTAGGATTTGTGACGCAGCCACGATTCACTGTCTCCTGGAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCCCCTCAGACCAAGTTaGGAGGGTTCCGTTCAAGCT +
Preference number: 2 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLPLRPS*EGSVQA
Trigger: AGCTTGAACGGAACCCTCCCAACTTGGTCTGAGGGG...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CAA 90 bp GCTGGGCAGAAGGGTGCAGCGCCCAGCCTTCCCTGCCCCCTTCTTTaGTGGAACATTTACAAAGTTGAGCTAAGCATAAAAGCTATCAAG +
Preference number: 2 (lower is better)
Translates to: AGQKGAAPSLPCPLL*WNIYKVELSIKAIK
Trigger: CTTGATAGCTTTTATGCTTAGCTCAACTTTGTAAATGTTCCACAAAAGAAGGGGGCAGGGAAGGCTGGGCGCTGCACCCTTCTGCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp AACGGTGTTGCCCCGAAAGGATCGATGTTCGCCAGCAACATTTTGTaGATGATAGAACTCCCAGCAATGGAGGCAGCAAGTCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: NGVAPKGSMFASNIL*MIELPAMEAASPAL
Trigger: GAGAGCAGGACTTGCTGCCTCCATTGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGCGAACATCGATCCTTTCGGGGCAACACCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp TCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTaGGGAGGGTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGC +
Preference number: 2 (lower is better)
Translates to: SLPRNSTSVTTPQTK*GGFRSSSLIPWRIR
Trigger: GCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAACCCTCCCAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCACAGGTAAGGAAGCATaGCACGTGTGTGCACATGTG +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSTGKEA*HVCAHV
Trigger: CACATGTGCACACACGTGTCATGCTTCCTTACCTGT...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp AGGTGTCCAGCGGCTAAAACACCAGACAGCACAGATCTGACCTGGACATCCACTTCCCCTCTGACATTTTaGCATGAGGTAACTGATGGG +
Preference number: 2 (lower is better)
Translates to: RCPAAKTPDSTDLTWTSTSPLTF*HEVTDG
Trigger: CCCATCAGTTACCTCATGGCAAAATGTCAGAGGGGA...AGTGGATGTCCAGGTCAGATCTGTGCTGTCTGGTGTTTTAGCCGCTGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp AGTGAGTCTAGATCTGGGTCAATAAACGGTGTTGCCCCGAAAGGATCGATGTTCCCCCTCAGACCAAGTTaGGAGGGTTCCGTTCAAGCT +
Preference number: 2 (lower is better)
Translates to: SESRSGSINGVAPKGSMFPLRPS*EGSVQA
Trigger: AGCTTGAACGGAACCCTCCCAACTTGGTCTGAGGGG...GAACATCGATCCTTTCGGGGCAACACCGTTTATTGACCCAGATCTAGACTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCACTCTGTATTGAGTGGTaGGTGAGGACTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PFTEQATSYQHCEQPSAALCIEW*VRTSLP
Trigger: GGGAAGAGAAGTCCTCACTCACCACTCAATACAGAG...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GGCATCAAACCTGTTGCCAGACCTGCTGAGCCATCTTGTCTGCGCCAACAGTCTTATCTACTGAGCACCTaGCAGGCTACACTATCAAAA +
Preference number: 2 (lower is better)
Translates to: GIKPVARPAEPSCLRQQSYLLST*QATLSK
Trigger: TTTTGATAGTGTAGCCTGCCAGGTGCTCAGTAGATA...AGACTGTTGGCGCAGACAAGATGGCTCAGCAGGTCTGGCAACAGGTTTGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATAGCTTCCAGATAACATaGATGCTGACTGATAGATGG +
Preference number: 2 (lower is better)
Translates to: QDAQACYECWDLNSSLPDSFQIT*MLTDRW
Trigger: CCATCTATCAGTCAGCATCCATGTTATCTGGAAGCT...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp ATCCTAGTGATGAGTTCCTCCGCAGCCTGGGAGCAGAGCCGCATCTGTGACACTCTTGTCATCAAAGGATaGCGCAGCAAATATATCATC +
Preference number: 2 (lower is better)
Translates to: ILVMSSSAAWEQSRICDTLVIKG*RSKYII
Trigger: GATGATATATTTGCTGCGCCATCCTTTGATGACAAG...AGTGTCACAGATGCGGCTCTGCTCCCAGGCTGCGGAGGAACTCATCACTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp ATCACCTCAGTCCCCAGAACTCAGGCTGGGATCTCAGCCACGACCTaGAAAAATTCCTGGATGTCAAGTCTTACAAGTGCAAGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: ITSVPRTQAGISATT*KNSWMSSLTSASRN
Trigger: GTTTCTGCTTGCACTTGTAAGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGACTGAGGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp ATAAACGGTGTTGCCCCGAAAGGATCGATGTTCGCCAGCAACATTTaGTTGATGATAGAACTCCCAGCAATGGAGGCAGCAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: INGVAPKGSMFASNI*LMIELPAMEAASPA
Trigger: AGCAGGACTTGCTGCCTCCATTGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGCGAACATCGATCCTTTCGGGGCAACACCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp TTAAACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTaGGTACAATCCAGAGGAGGCTCCTCGTCCTCACTGGGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: LNFGTMRKTVLLLFL*VQSRGGSSSSLGRR
Trigger: CCTCCGCCCCAGTGAGGACGAGGAGCCTCCTCTGGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGAAATAGCACCAGTGTaGCCACCCCTCAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDEIAPV*PPLRPS
Trigger: ACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGTATTGAGTGGTGAGTaGGGACTTCTCTTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLVLSGE*GLLFPE
Trigger: TTCTGGGAAGAGAAGTCCTCACTCACCACTCAATAC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTAAGACCCTCACTGGATaGTGGGCAAACAAGTCCACT +
Preference number: 2 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCKTLTG*WANKST
Trigger: AGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GGGGAGCTCTGGGTTGATCTGGTTTCACAGGAAAAGTTGGCAAGGTACCCACCATTGACCAGTGGATACTaGGAACTTAGGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: GELWVDLVSQEKLARYPPLTSGY*ELRVKN
Trigger: GTTTTTCACCCTAAGTTCTCAGTATCCACTGGTCAA...TGGTGGGTACCTTGCCAACTTTTCCTGTGAAACCAGATCAACCCAGAGCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp ATGAAGATTTCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTGCAGAGCCGCATCTGTaGCACTTCCTCTGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: MKISLYSPKLSRSSQAATAEPHL*HFLCCQ
Trigger: CTGGCAACAGAGGAAGTGTCACAGATGCGGCTCTGC...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGAAATCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCCTGAAGCAAAAGCACTaGAAATTGGAGGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSLKQKH*KLEAIQ
Trigger: TTGGATGGCCTCCAATTTGCAGTGCTTTTGCTTCAG...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCGAAGGCTTGTGTCCTTaGAAGCACAAGACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSEGLCP*KHKTLK
Trigger: CTTCAAAGTCTTGTGCTTGCAAGGACACAAGCCTTC...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp CCTCACTGGGGCGGAGGATGTAATAAAGCCAGGGAATCTCCGTTAACTTCTGAATCTCGTCTTTCCAGATaGAAAAGTTCAGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PHWGGGCNKARESPLTSESRLSR*KSSAPL
Trigger: CAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGA...TTCAGAAGTTAACGGAGATTCCCTGGCTTTATTACATCCTCCGCCCCAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAATGCACAATGAGAACATaGCTTTGTGGAATGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQCTMRT*LCGMAF
Trigger: AAAGGCCATTCCACAAAGCCATGTTCTCATTGTGCA...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGATGATGGGGGAGCTCTaGGTTGATCTGGTTTCACAG +
Preference number: 2 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVMMGEL*VDLVSQ
Trigger: CTGTGAAACCAGATCAACCCAGAGCTCCCCCATCAT...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGGTTCTGTTTCCTTCCTaGGGTAGGGGGAGTGCACAG +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKVLFPS*GRGSAQ
Trigger: CTGTGCACTCCCCCTACCCCAGGAAGGAAACAGAAC...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAGTTTTGGAGGGTGCTaGGGTGGAAGGAGACATGGC +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEISFGGC*GGRRHG
Trigger: GCCATGTCTCCTTCCACCCCAGCACCCTCCAAAACT...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp CTGTCGCTCATTCAGCTTCACCTTCCACTTGGTTGTTGTTGTTGTTaGTACTACGCACTGTTGGGAGTGAACCAGGGTTTCACACTTGCA +
Preference number: 2 (lower is better)
Translates to: LSLIQLHLPLGCCCC*YYALLGVNQGFTLA
Trigger: TGCAAGTGTGAAACCCTGGTTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAACCAAGTGGAAGGTGAAGCTGAATGAGCGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGTCAGGTTTGCACAATaGGAACATGGCTTTGTGGAA +
Preference number: 2 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLVRFAQ*EHGFVE
Trigger: TTCCACAAAGCCATGTTCTCATTGTGCAAACCTGAC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGAACCTGGGTAAAATGTaGGACATACTTACATGGTCA +
Preference number: 2 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWNLGKM*DILTWS
Trigger: TGACCATGTAAGTATGTCTCACATTTTACCCAGGTT...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGGGGGGAGCTCTGGGTTaGTCTGGTTTCACAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKGGALG*SGFTGK
Trigger: TTTTCCTGTGAAACCAGATCAACCCAGAGCTCCCCC...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCCAAAGTCCTAGAGACTaGTCCACAAAGCACATTTGT +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSQSPRD*STKHIC
Trigger: ACAAATGTGCTTTGTGGATCAGTCTCTAGGACTTTG...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATCCTGAAAGTTATCATTaGGATGGATTAAACAACCAC +
Preference number: 2 (lower is better)
Translates to: QDAQACYECWDLNSSLPDPESYH*DGLNNH
Trigger: GTGGTTGTTTAATCCATCTCAATGATAACTTTCAGG...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATGATGAAATATTGGCCTaGAAGTTATCATTGAGATGG +
Preference number: 2 (lower is better)
Translates to: QDAQACYECWDLNSSLPDDEILA*KLSLRW
Trigger: CCATCTCAATGATAACTTTCAGGCCAATATTTCATC...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGCTGAGCCATCTTGTCTaGGCCAACAGTCTGCATTGC +
Preference number: 2 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLLSHLV*ANSLHC
Trigger: GCAATGCAGACTGTTGGCGCAGACAAGATGGCTCAG...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGGCACAGGAAATGCTTTaGAGGACAGCAGAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLAQEML*RTAEPA
Trigger: AGCTGGCTCTGCTGTCCTCCAAAGCATTTCCTGTGC...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp GGCCATCCAACAATGCTTCACAAAACTGTGAATTTGCACTGTTTCTaGGATGAGCTGACCTGGGCCGTGTCATTCTGCCAAGGTACTAAA +
Preference number: 2 (lower is better)
Translates to: GHPTMLHKTVNLHCF*DELTWAVSFCQGTK
Trigger: TTTAGTACCTTGGCAGAATGACACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAGCATTGTTGGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTGGACATCTCTGGTTAGCATCTaGGCTCTGTTTTTGTGCACA +
Preference number: 2 (lower is better)
Translates to: ESPLTSEAPSPQSVRHWTSLVSI*ALFLCT
Trigger: TGTGCACAAAAACAGAGCTCAGATGCTAACCAGAGA...TGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR GCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGAAGTCACCTGAGGGATaGCACAGCAGAAACAAGGGA +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKKSPEG*HSRNKG
Trigger: TCCCTTGTTTCTGCTGTGGCATCCCTCAGGTGACTT...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCCGAAACACTAAGCATTaGGGAAATGATTGTCTCGAA +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSRNTKH*GNDCLE
Trigger: TTCGAGACAATCATTTCCCCAATGCTTAGTGTTTCG...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCAAGACTCACGAAGGCATaGGTTAGAGAGAGAAATGTT +
Preference number: 2 (lower is better)
Translates to: PFTEQATSYQHCEQPSAARLTKA*VRERNV
Trigger: AACATTTCTCTCTCTAACCCATGCCTTCGTGAGTCT...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp TTGATCCCTTTGGATTTTGCTCTGCTATGGGTGGAGCCAAGCCCCTaGCCTGTCCTAAGCAAACACTTTGCCACTGAACTTCATTTATTT +
Preference number: 2 (lower is better)
Translates to: LIPLDFALLWVEPSP*PVLSKHFATELHLF
Trigger: AAATAAATGAAGTTCAGTGGCAAAGTGTTTGCTTAGGACAGGCAAGGGGCTTGGCTCCACCCATAGCAGAGCAAAATCCAAAGGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTCTCTGTATTGAGTGGTaGGTGAGGACTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: IPQIKTFTHSKISVGRGALCIEW*VRTSLP
Trigger: GGGAAGAGAAGTCCTCACTCACCACTCAATACAGAG...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp ATACTGCCATCTGCACACTGTCAAACACTGCGACAACTTCTAGAATCTTGTCATTGGGCATCAGGAGACTaGGATGTGGTTTTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: ILPSAHCQTLRQLLESCHWASGD*DVVLAD
Trigger: ATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCA...ATGACAAGATTCTAGAAGTTGTCGCAGTGTTTGACAGTGTGCAGATGGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCGTGGGAATTTGCATTTaGAAAGCTGGAATAAGTTTC +
Preference number: 2 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSVGICI*KAGISF
Trigger: GAAACTTATTCCAGCTTTCCAAATGCAAATTCCCAC...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp ACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCAATGATCCCTGGAGGCTaGACCCATGCTTCACCATCC +
Preference number: 2 (lower is better)
Translates to: TLALCERLCFCCFFWYNPMIPGG*THASPS
Trigger: GGATGGTGAAGCATGGGTCCAGCCTCCAGGGATCAT...TGGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CCA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCCAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAG +
Preference number: 2 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSQSVRH*TPALRE
Trigger: CTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTG...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCAGAACATGTAAGCTTATaGAAACACCCAAGAATTCTC +
Preference number: 2 (lower is better)
Translates to: PFTEQATSYQHCEQPSAAEHVSL*KHPRIL
Trigger: GAGAATTCTTGGGTGTTTTCATAAGCTTACATGTTC...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGCAGTATATGTTCTTCTaGAATGCTCAGTGTGAACTA +
Preference number: 2 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLQYMFF*NAQCEL
Trigger: TAGTTCACACTGAGCATTTCAGAAGAACATATACTG...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAGATCCAAGAGGTGAGTaGAAAACCACCACTATCTCA +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEIDPRGE*KTTTIS
Trigger: TGAGATAGTGGTGGTTTTTCACTCACCTCTTGGATC...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGAGAGGTGCTTATCTGTaGAGTAAATCACAACAACAG +
Preference number: 2 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVRGAYL*SKSQQQ
Trigger: CTGTTGTTGTGATTTACTGCACAGATAAGCACCTCT...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTTTAGCATGTCAGGTTTaGACAATGAGAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCLACQV*TMRTWL
Trigger: AAGCCATGTTCTCATTGTGCAAACCTGACATGCTAA...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGCTGCGAAGTTCCAGCTaGATACTGTTAACACAGTTG +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKLRSSS*ILLTQL
Trigger: CAACTGTGTTAACAGTATGCAGCTGGAACTTCGCAG...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAATGTCAGTAAGTGCGTaGACACAGGTAAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEIMSVSA*TQVRKH
Trigger: ATGCTTCCTTACCTGTGTGCACGCACTTACTGACAT...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGCTCTCTCTACTTAAGTaGATGTGGCTGGATGTATCC +
Preference number: 2 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLLSLLK*MWLDVS
Trigger: GGATACATCCAGCCACATCCACTTAAGTAGAGAGAG...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAATTATTGTGTGTATGTaGGTGAGGATGCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEIIIVCM*VRMPWW
Trigger: CCACCATGGCATCCTCACCCACATACACACAATAAT...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGTTTGGTGTTCATCTATaGACCAAGTCACCTTTATTC +
Preference number: 2 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLFGVHL*TKSPLF
Trigger: GAATAAAGGTGACTTGGTCCATAGATGAACACCAAA...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGGCTTCACCTTCCACTTaGTTGTTGTTGTTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVASPST*LLLLFV
Trigger: TACAAACAACAACAACAACCAAGTGGAAGGTGAAGC...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp ACTGCCATCTGCACACTGTCAAACACTGCGACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCAGCAAATATATCATCCTCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: TAICTLSNTATTSRI*SSKDGAANISSSLV
Trigger: AACCAAAGAGGATGATATATTTGCTGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGTCGCAGTGTTTGACAGTGTGCAGATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR TCA 90 bp TTGAAAAATTCCTGGATGTCAAGTCTTACAAGTGCAAGCAGAAACTCAAAATGGGAAATAGCACCAGTGTaGCCACCCCTCAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: LKNSWMSSLTSASRNSKWEIAPV*PPLRPS
Trigger: ACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTC...CCATTTTGAGTTTCTGCTTGCACTTGTAAGACTTGACATCCAGGAATTTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGAGATTAAAAGACCCATaGCCTACTCTAGGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKRLKDP*PTLGSC
Trigger: ACAGCTACCTAGAGTAGGTCATGGGTCTTTTAATCT...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGATCGGAATGCCACATTaGCCAGTGCAATCACAGACA +
Preference number: 2 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMIGMPH*PVQSQT
Trigger: TGTCTGTGATTGCACTGGCCAATGTGGCATTCCGAT...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTTTTGTTCCTGGGCCTTaGCAAACCGTCTCAAGTTCC +
Preference number: 2 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIFVPGP*QTVSSS
Trigger: GGAACTTGAGACGGTTTGCCAAGGCCCAGGAACAAA...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp GGTCTGCAATGTCACCTCATGTATTCTGCTGAAAGTGTCATGAATTaGTGCCTTCCCCAAATAAACCTGAGATTTCTTCCTGTTCTACGA +
Preference number: 2 (lower is better)
Translates to: GLQCHLMYSAESVMN*CLPQINLRFLPVLR
Trigger: TCGTAGAACAGGAAGAAATCTCAGGTTTATTTGGGGAAGGCACAAATTCATGACACTTTCAGCAGAATACATGAGGTGACATTGCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAGACACAGAAGTCACCTaGGGGATGCCACAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRDTEVT*GMPQQK
Trigger: TTTCTGCTGTGGCATCCCTCAGGTGACTTCTGTGTC...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGGTCAGCAGCCCTGCTTaGTTCTCTTATATACACAAC +
Preference number: 2 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMVSSPA*FSYIHN
Trigger: GTTGTGTATATAAGAGAAGCAAGCAGGGCTGCTGAC...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATATCCTTCTCCCTGGTTTaGTTACATATTGAACTGCAT +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEISFSLV*LHIELH
Trigger: ATGCAGTTCAATATGTAAGCAAACCAGGGAGAAGGA...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGACTTTTGTTTGTAAATaGAATGTCAAGGGTTACCAG +
Preference number: 2 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVTFVCK*NVKGYQ
Trigger: CTGGTAACCCTTGACATTGCATTTACAAACAAAAGT...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGAGCACAGATCTGACCTaGACATCCACTGTTTCCACC +
Preference number: 2 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWSTDLT*TSTVST
Trigger: GGTGGAAACAGTGGATGTCCAGGTCAGATCTGTGCT...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGAATGCTCTACATTTGTaGTTACAGGGCACTCAAAGT +
Preference number: 2 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKNALHL*LQGTQS
Trigger: ACTTTGAGTGCCCTGTAACCACAAATGTAGAGCATT...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGTTCTCTCCCTTGGGGTaGGCAGTGAGAATAAGGGAA +
Preference number: 2 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWFSPLG*AVRIRE
Trigger: TTCCCTTATTCTCACTGCCCACCCCAAGGGAGAGAA...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCCAAAGGCTCTGTCTCTaGTTAGCATCTGAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSQRLCL*LASELC
Trigger: ACAGAGCTCAGATGCTAACCAGAGACAGAGCCTTTG...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 90 bp CAGGCTACACTATCAAAACCGCCTTCACTGGGTCAGCAGCCCTGCTaGCTTCTCTTATATACACAACTTTCAAATATTACAGTTGATTTT +
Preference number: 2 (lower is better)
Translates to: QATLSKPPSLGQQPC*LLLYTQLSNITVDF
Trigger: AAAATCAACTGTAATATTTGAAAGTTGTGTATATAAGAGAAGCAAGCAGGGCTGCTGACCCAGTGAAGGCGGTTTTGATAGTGTAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGGTTAGATCCAAGAGGTaGGTGAAAAACCACCACTAT +
Preference number: 2 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMVRSKR*VKNHHY
Trigger: ATAGTGGTGGTTTTTCACTCACCTCTTGGATCTAAC...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTAGAGGTGCTTATCTGTaGAGTAAATCACAACAACAG +
Preference number: 2 (lower is better)
Translates to: IPQIKTFTHSKISVGRGARGAYL*SKSQQQ
Trigger: CTGTTGTTGTGATTTACTGCACAGATAAGCACCTCT...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGCAAGTGATTTTATTCTaGGTGGTGTGTTGTGCAATT +
Preference number: 2 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLQVILF*VVCCAI
Trigger: AATTGCACAACACACCACGCAGAATAAAATCACTTG...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAACCGTCTCAAGTTCCTaGACTATCTATGTTTTTAAC +
Preference number: 2 (lower is better)
Translates to: ATARTVADRKIYTRVAEITVSSS*TIYVFN
Trigger: GTTAAAAACATAGATAGTGCAGGAACTTGAGACGGT...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTTTCACCCTTGGAAAATaGAAGTTCACAATGCACTCG +
Preference number: 2 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIFTLGK*KFTMHS
Trigger: CGAGTGCATTGTGAACTTTCATTTTCCAAGGGTGAA...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR GCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGTTAGCATGTCAGGTTTaGACAATGAGAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMLACQV*TMRTWL
Trigger: AAGCCATGTTCTCATTGTGCAAACCTGACATGCTAA...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGTATGCAGTTAGTACTTaGACTGTAGAAGTGGCAATG +
Preference number: 2 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMYAVST*TVEVAM
Trigger: CATTGCCACTTCTACAGTCCAAGTACTAACTGCATA...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGGGTGTCAGCGGGAACTaGAAAGATTACCAAACAAAA +
Preference number: 2 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWGVSGN*KDYQTK
Trigger: TTTTGTTTGGTAATCTTTTCAGTTCCCGCTGACACC...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGGTTTCTCTTTCCACTTaGATATGGCATCTGGCATCA +
Preference number: 2 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWVSLST*IWHLAS
Trigger: TGATGCCAGATGCCATATTCAAGTGGAAAGAGAAAC...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTCTAGTTGCTTCTTTGTaGAGGAATCCTATTGCTAAG +
Preference number: 2 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAILVASL*RNPIAK
Trigger: CTTAGCAATAGGATTCCTTCACAAAGAAGCAACTAG...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAGACACTGACACGCCATaGTCTAGAAAAAGGGAAATA +
Preference number: 2 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRDTDTP*SRKREI
Trigger: TATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTC...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGACAACCTCCTTCTCCCTaGTTTGCTTACATATTGAAC +
Preference number: 2 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRQPPSP*FAYILN
Trigger: GTTCAATATGTAAGCAAACCAGGGAGAAGGAGGTTG...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp ACATTGAAACTACTAAGTGATTCGTTTATTTTCAGCTCAAAAGTCTaGATAGGACTTATCTTTGGAAAGTGTCCATTGTGCACAACCTGG +
Preference number: 2 (lower is better)
Translates to: TLKLLSDSFIFSSKV*IGLIFGKCPLCTTW
Trigger: CCAGGTTGTGCACAATGGACACTTTCCAAAGATAAGTCCTATCAAGACTTTTGAGCTGAAAATAAACGAATCACTTAGTAGTTTCAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR TCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGAGCTGCAGGTATAAATaGCTTACTTTAGAAGTGATG +
Preference number: 2 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWSCRYK*LTLEVM
Trigger: CATCACTTCTAAAGTAAGTCATTTATACCTGCAGCT...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 90 bp GTCATGAACTGTATAATTCCACTAATACTTGAAATAATGAAAGTTTaGCAATGGAGACAGGTTATCAGTTGCCTGGAGGTGAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: VMNCIIPLILEIMKV*QWRQVISCLEVRRN
Trigger: ATTTCTTCTCACCTCCAGGCAACTGATAACCTGTCTCCATTGCAAAACTTTCATTATTTCAAGTATTAGTGGAATTATACAGTTCATGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp CCAGCTGGTCCTTGCTTTCACCCAAGGACTCGTCACTaGCGGACTCCACGGTGTCCTCTTCGGGGATGGCAG +
Preference number: 3 (lower is better)
Translates to: PAGPCFHPRTRH*RTPRCPLRGWQ
Trigger: CTGCCATCCCCGAAGAGGACACCGTGGAGTCCGCCAGTGACGAGTCCTTGGGTGAAAGCAAGGACCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp GTGGTGGCCATGGCTGGACCAGCGACAGAGTCAGTTTaGGGATGGCCACAGCTTGCCTGGGCATCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: VVAMAGPATESV*GWPQLAWASGD
Trigger: GTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp CTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATGTGCCAGCTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: LREAWVGFVQGV*AGIHCMCQLLL
Trigger: GAGCAGGAGCTGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp GCTAAAGGGGAGCAGGGCAAGCAAGACTGGGCTTCCTaGTCGGCCCTTTGCTCCCCTGCACTGTGCTCAATC +
Preference number: 3 (lower is better)
Translates to: AKGEQGKQDWAS*SALCSPALCSI
Trigger: GATTGAGCACAGTGCAGGGGAGCAAAGGGCCGATCAGGAAGCCCAGTCTTGCTTGCCCTGCTCCCCTTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TCCACAGAGTGTAAGGCACTGGACACCCGCTCTTCGTaGGGAGATTCCAAGTGCTCCGGGAAGCGTGGGTTG +
Preference number: 3 (lower is better)
Translates to: STECKALDTRSS*GDSKCSGKRGL
Trigger: CAACCCACGCTTCCCGGAGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp CGTGAGGAGATTCCAAGTGCTCCGGGAAGCGTGGGTTaGCTTTGTTCAGGGCGTGTGAGCAGGCATTCACTG +
Preference number: 3 (lower is better)
Translates to: REEIPSAPGSVG*LCSGRVSRHSL
Trigger: CAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATCTCCTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp TGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGACTaGGATGTGGTTTTGGCTGATAGCGACTCTTTCGCG +
Preference number: 3 (lower is better)
Translates to: WGWPQLAWASGD*DVVLADSDSFA
Trigger: CGCGAAAGAGTCGCTATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR GCA 72 bp TGCCAGCTCCTGCTCCAGGAGACAGTGAATCGTGGCTaGGTCACAAATCCTAGTGATGAGTTCCTCCGCAGC +
Preference number: 3 (lower is better)
Translates to: CQLLLQETVNRG*VTNPSDEFLRS
Trigger: GCTGCGGAGGAACTCATCACTAGGATTTGTGACGCAGCCACGATTCACTGTCTCCTGGAGCAGGAGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp GGCCACAGCTTGCCTGGGCATCAGGAGACTGAGATGTaGTTTTGGCTGATAGCGACTCTTTCGCGTCGTCCT +
Preference number: 3 (lower is better)
Translates to: GHSLPGHQETEM*FWLIATLSRRP
Trigger: AGGACGACGCGAAAGAGTCGCTATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCAGGCAAGCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp GAAGCAGCAGAGTGCAGGGCTAGTGAGGCCCACTCTTaGTCAGCAACAGCCAGAACTGTGGCTGACAGGAAA +
Preference number: 3 (lower is better)
Translates to: EAAECRASEAHS*SATARTVADRK
Trigger: TTTCCTGTCAGCCACAGTTCTGGCTGTTGCTGATCAAGAGTGGGCCTCACTAGCCCTGCACTCTGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp GCAAGACTGGGCTTCCTGATCGGCCCTTTGCTCCCCTaGACTGTGCTCAATCAGCCATTCTTGAGGCAAAGT +
Preference number: 3 (lower is better)
Translates to: ARLGFLIGPLLP*TVLNQPFLRQS
Trigger: ACTTTGCCTCAAGAATGGCTGATTGAGCACAGTGCAGGGGAGCAAAGGGCCGATCAGGAAGCCCAGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TCGAAGGATGGGCAGGATGCTCAGGCCTGCTATGAGTaGTGGGACTTGAACTCCAGTCTCCCTGATTGGGAA +
Preference number: 3 (lower is better)
Translates to: SKDGQDAQACYE*WDLNSSLPDWE
Trigger: TTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCCCATCCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp AAGGATGGGCAGGATGCTCAGGCCTGCTATGAGTGCTaGGACTTGAACTCCAGTCTCCCTGATTGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: KDGQDAQACYEC*DLNSSLPDWEA
Trigger: TGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCCCATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp CTCCTGAACCAAGATCCACTACTGGCTGCTCTGCGTTaGGAAAGCACAGGCAGCTCTGCCCTGGGAATAAAC +
Preference number: 3 (lower is better)
Translates to: LLNQDPLLAALR*ESTGSSALGIN
Trigger: GTTTATTCCCAGGGCAGAGCTGCCTGTGCTTTCTCAACGCAGAGCAGCCAGTAGTGGATCTTGGTTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp GGCAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTaGACTCCAGTCTCCCTGATTGGGAAGCAAGTATTC +
Preference number: 3 (lower is better)
Translates to: GRMLRPAMSAGT*TPVSLIGKQVF
Trigger: GAATACTTGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp CCACCTGCACTGGGACTCCCTCGTCGCCAAATATCGTaGTTTTTACCGTACGGCACTGTGCTATCCGGTGAT +
Preference number: 3 (lower is better)
Translates to: PPALGLPRRQIS*FLPYGTVLSGD
Trigger: ATCACCGGATAGCACAGTGCCGTACGGTAAAAATCACGATATTTGGCGACGAGGGAGTCCCAGTGCAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp GAAACAAGGGAGAGGAAGGGCTTCTCTCCCTTGGGGTaGGCAGTGAGAATAAGGGAAACCAGGAAGCCAATG +
Preference number: 3 (lower is better)
Translates to: ETRERKGFSPLG*AVRIRETRKPM
Trigger: CATTGGCTTCCTGGTTTCCCTTATTCTCACTGCCCACCCCAAGGGAGAGAAGCCCTTCCTCTCCCTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp GTACTAAACCCCCACGCTGGAGCCGCTCTGCATTCCTaGGTTAGAAAGGTTAACAGAGAGGAGAAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: VLNPHAGAALHS*VRKVNREEKQS
Trigger: GCTCTGCTTCTCCTCTCTGTTAACCTTTCTAACCCAGGAATGCAGAGCGGCTCCAGCGTGGGGGTTTAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp AGGGGCGGGATGGATGTACAGGTTGGTTCGAAGAACTaGCTTCCCAGAGTCACACTTCTGCTTGTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: RGGMDVQVGSKN*LPRVTLLLVFP
Trigger: TGGGAAGACAAGCAGAAGTGTGACTCTGGGAAGCCAGTTCTTCGAACCAACCTGTACATCCATCCCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp TTTTGGTACAATCCAGAGGAGGCTCCTCGTCCTCACTaGGGCGGAGGATGTAATAAAGCCAGGGAATCTCCG +
Preference number: 3 (lower is better)
Translates to: FWYNPEEAPRPH*GGGCNKARESP
Trigger: CGGAGATTCCCTGGCTTTATTACATCCTCCGCCCCAGTGAGGACGAGGAGCCTCCTCTGGATTGTACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR GCA 72 bp ATGCTTTGGAGGACAGCAGAGCCAGCTACAGTCGGGTaGACACCTGAGCATCTCTCTCTACTTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: MLWRTAEPATVG*TPEHLSLLKWM
Trigger: CATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAGCTGGCTCTGCTGTCCTCCAAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp ACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAGGAGATTCCAAGTGCT +
Preference number: 3 (lower is better)
Translates to: TSEAPSPQSVRH*TPALREEIPSA
Trigger: AGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp ACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTaGGTGAGGACTTCTCTTCCCAGAAATAGCACCAGT +
Preference number: 3 (lower is better)
Translates to: TGSGFQGLCIEW*VRTSLPRNSTS
Trigger: ACTGGTGCTATTTCTGGGAAGAGAAGTCCTCACTCACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR GCA 72 bp ATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTaGAGTAAATCACAACAACAGGCAGCGGCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: ISRERCFRGAYL*SKSQQQAAASK
Trigger: CTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCACCTCTGAAGCACCTCTCCCGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR GCA 72 bp CCAATGCCTTCACTGGGAAGCCTGCGAAGTTCCAGCTaGATACTGTTAACACAGTTGCAGGCACACATAGGA +
Preference number: 3 (lower is better)
Translates to: PMPSLGSLRSSS*ILLTQLQAHIG
Trigger: TCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGCAGGCTTCCCAGTGAAGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CCA 72 bp CCTGTCAGTAATCACCTCAGTCCCCAGAACTCAGGCTaGGATCTCAGCCACGACCTTGAAAAATTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: PVSNHLSPQNSG*DLSHDLEKFLD
Trigger: ATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGACTGAGGTGATTACTGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp GTTTGCCTGTTGATCCCTTTGGATTTTGCTCTGCTATaGGTGGAGCCAAGCCCCTTGCCTGTCCTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: VCLLIPLDFALL*VEPSPLPVLSK
Trigger: TTTGCTTAGGACAGGCAAGGGGCTTGGCTCCACCCATAGCAGAGCAAAATCCAAAGGGATCAACAGGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp CACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTaGATGTATCCTAGCGAGGATCCCCCTTCTGAAACC +
Preference number: 3 (lower is better)
Translates to: HLSISLYLSGCG*MYPSEDPPSET
Trigger: GGTTTCAGAAGGGGGATCCTCGCTAGGATACATCCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATTCAAGGGTTACCAGATaGGATGTCTCTTTTTCATGG +
Preference number: 3 (lower is better)
Translates to: QDAQACYECWDLNSSLPDSRVTR*DVSFSW
Trigger: CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGA...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp CTTTGCTCCCCTGCACTGTGCTCAATCAGCCATTCTTaGGGCAAAGTCCTAGAGACTGATCCACAAAGCACA +
Preference number: 3 (lower is better)
Translates to: LCSPALCSISHS*GKVLETDPQST
Trigger: TGTGCTTTGTGGATCAGTCTCTAGGACTTTGCCTCAAGAATGGCTGATTGAGCACAGTGCAGGGGAGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TCAAACCTGTTGCCAGACCTGCTGAGCCATCTTGTCTaGGCCAACAGTCTGCATTGCTATAAGCTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: SNLLPDLLSHLV*ANSLHCYKLPD
Trigger: ATCTGGAAGCTTATAGCAATGCAGACTGTTGGCGCAGACAAGATGGCTCAGCAGGTCTGGCAACAGGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp GTGCACATGTGTGGGTATGTTTATCTACTGAGCACCTaGCAGGCTACACTATCAAAACCGCCTTCACTGGGT +
Preference number: 3 (lower is better)
Translates to: VHMCGYVYLLST*QATLSKPPSLG
Trigger: ACCCAGTGAAGGCGGTTTTGATAGTGTAGCCTGCCAGGTGCTCAGTAGATAAACATACCCACACATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCGTGCACACCTGTAGTTaGGAACAGGCAAAGAATTTG +
Preference number: 3 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSVHTCS*EQAKNL
Trigger: CAAATTCTTTGCCTGTTCCAAACTACAGGTGTGCAC...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGTGCACAGGAAATGCTTaGGAGGACAGCAGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLCTGNA*EDSRAS
Trigger: GCTGGCTCTGCTGTCCTCCAAAGCATTTCCTGTGCA...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TCCCCAGAACTCAGGCTGGGATCTCAGCCACGACCTTaGAAAATTCCTGGATGTCAAGTCTTACAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: SPELRLGSQPRP*KIPGCQVLQVQ
Trigger: TTGCACTTGTAAGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TCCTTTCTCTTGAACAATGATGGGGGAGCTCTGGGTTaGTCTGGTTTCACAGGAAAAGTTGGCAAGGTACCC +
Preference number: 3 (lower is better)
Translates to: SFLLNNDGGALG*SGFTGKVGKVP
Trigger: GGGTACCTTGCCAACTTTTCCTGTGAAACCAGATCAACCCAGAGCTCCCCCATCATTGTTCAAGAGAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TGCAGGCCTCACACCTTCCAATGCAGTCTTTTTATTTaGGAAGGTCGATCTGAAGGCAGTGCCCTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: CRPHTFQCSLFI*EGRSEGSALWE
Trigger: TTCCCAAAGGGCACTGCCTTCAGATCGACCTTCTCAAATAAAAAGACTGCATTGGAAGGTGTGAGGCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp CTGTGCTATCCGGTGATGCTGCAATTTAATGACCCTTaGTACTGCCATCTGCACACTGTCAAACACTGCGAC +
Preference number: 3 (lower is better)
Translates to: LCYPVMLQFNDP*YCHLHTVKHCD
Trigger: GTCGCAGTGTTTGACAGTGTGCAGATGGCAGTATCAAGGGTCATTAAATTGCAGCATCACCGGATAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR GCA 72 bp TACTGTCAAGGGACAATGCTCACGTCAGCACTGCCCTaGAGAGAGAAAATCAAAGGTACAATTCTTGCCCCA +
Preference number: 3 (lower is better)
Translates to: YCQGTMLTSALP*REKIKGTILAP
Trigger: TGGGGCAAGAATTGTACCTTTGATTTTCTCTCTGCAGGGCAGTGCTGACGTGAGCATTGTCCCTTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp CTACGCACTGTTGGGAGTGAACCAGGGTTTCACACTTaGAGTATAAACACTCTTCCACTGAGACACTTGCCT +
Preference number: 3 (lower is better)
Translates to: LRTVGSEPGFHT*SINTLPLRHLP
Trigger: AGGCAAGTGTCTCAGTGGAAGAGTGTTTATACTGCAAGTGTGAAACCCTGGTTCACTCCCAACAGTGCGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp GGCTCATCCATAACTTTTTCAGCTTCTTCAATGACTTaGCTCACCGCTTTCTTTAGACTGTTGGCCCGCAGC +
Preference number: 3 (lower is better)
Translates to: GSSITFSASSMT*LTAFFRLLARS
Trigger: GCTGCGGGCCAACAGTCTAAAGAAAGCGGTGAGGCAAGTCATTGAAGAAGCTGAAAAAGTTATGGATGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp GTGTCGGAACTCACTGGACCCAGACTCACGAAGGCATaGGTTAGAGAGAGAAATGTTCACACTGGACAAAAT +
Preference number: 3 (lower is better)
Translates to: VSELTGPRLTKA*VRERNVHTGQN
Trigger: ATTTTGTCCAGTGTGAACATTTCTCTCTCTAACCCATGCCTTCGTGAGTCTGGGTCCAGTGAGTTCCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp AGGATTCAAGATTCAGCGTTAATCGGAATGCCACATTaGCCAGTGCAATCACAGACATGTCCCCACCACAAG +
Preference number: 3 (lower is better)
Translates to: RIQDSALIGMPH*PVQSQTCPHHK
Trigger: CTTGTGGTGGGGACATGTCTGTGATTGCACTGGCCAATGTGGCATTCCGATTAACGCTGAATCTTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCAATCTCAGCCACGACCTaGAAAAATTCCTGGATGTCA +
Preference number: 3 (lower is better)
Translates to: PFTEQATSYQHCEQPSAAISATT*KNSWMS
Trigger: TGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGAT...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGGCCAGGAAACGGGTTTaGAATGTAGACTCGGGAACC +
Preference number: 3 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLARKRV*NVDSGT
Trigger: GGTTCCCGAGTCTACATTCAAAACCCGTTTCCTGGC...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGCCTTCCACTTGGTTGTaGTTGTTGTTTGTACTACGC +
Preference number: 3 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLPSTWL*LLFVLR
Trigger: GCGTAGTACAAACAACAACAACAACCAAGTGGAAGG...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp GAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTGGACACTCTGCTCCAGATTCTaGTACGATCTCTGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: ESPLTSEAPSPQSVRHWTLCSRF*YDLCSS
Trigger: GCTACTACAGAGATCGTACAAGAATCTGGAGCAGAG...TGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CAA 90 bp ACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCAAGCGACAGAGTCAGTTaGGGGATGGCCACAGCTTGC +
Preference number: 3 (lower is better)
Translates to: TLALCERLCFCCFFWYNPSDRVS*GMATAC
Trigger: GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCT...TGGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CCA 72 bp TATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATTaGGAAGCAAGTATTCTTAGTTGCAGAGGCATCTCT +
Preference number: 3 (lower is better)
Translates to: YECWDLNSSLPD*EASILSCRGIS
Trigger: AGAGATGCCTCTGCAACTAAGAATACTTGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp AGGTGTGACCAAATGAGCCTTGTTAGATCCAAGAGGTaGGTGAAAAACCACCACTATCTCAACGGGAAACAC +
Preference number: 3 (lower is better)
Translates to: RCDQMSLVRSKR*VKNHHYLNGKH
Trigger: GTGTTTCCCGTTGAGATAGTGGTGGTTTTTCACTCACCTCTTGGATCTAACAAGGCTCATTTGGTCACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp CTCAATCAGCCATTCTTGAGGCAAAGTCCTAGAGACTaGTCCACAAAGCACATTTGTGTCTCTGTACTCTGG +
Preference number: 3 (lower is better)
Translates to: LNQPFLRQSPRD*STKHICVSVLW
Trigger: CCAGAGTACAGAGACACAAATGTGCTTTGTGGATCAGTCTCTAGGACTTTGCCTCAAGAATGGCTGATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp AAGACAACTCAGGCAAGGAACATCGTGCATCAGATTTaGATCAGTCATAGTGAGCTATGGGTTGGTTTCACC +
Preference number: 3 (lower is better)
Translates to: KTTQARNIVHQI*ISHSELWVGFT
Trigger: GGTGAAACCAACCCATAGCTCACTATGACTGATGCAAATCTGATGCACGATGTTCCTTGCCTGAGTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp ACTAATGCTGAGATAACAGCTGTGCTCCCTGTCAAATaGCATGACTTCCTACCTCCATCAAGATACCTAAGG +
Preference number: 3 (lower is better)
Translates to: TNAEITAVLPVK*HDFLPPSRYLR
Trigger: CCTTAGGTATCTTGATGGAGGTAGGAAGTCATGGCATTTGACAGGGAGCACAGCTGTTATCTCAGCATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp CTTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTaGAGGCCTCACACCTTCCAATGCAGTCTTTTTATT +
Preference number: 3 (lower is better)
Translates to: LRNISTTSLQKE*RPHTFQCSLFI
Trigger: AATAAAAAGACTGCATTGGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp TGTGAGCAACCTTCAGCTGCATATGCAGTTAGTACTTaGACTGTAGAAGTGGCAATGGCTAACCTGTGTGAA +
Preference number: 3 (lower is better)
Translates to: CEQPSAAYAVST*TVEVAMANLCE
Trigger: TTCACACAGGTTAGCCATTGCCACTTCTACAGTCCAAGTACTAACTGCATATGCAGCTGAAGGTTGCTCACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp GGGAAAGACGTGTTCAAATTCTTTGTTCCTGGGCCTTaGCAAACCGTCTCAAGTTCCTGCACTATCTATGTT +
Preference number: 3 (lower is better)
Translates to: GKDVFKFFVPGP*QTVSSSCTIYV
Trigger: AACATAGATAGTGCAGGAACTTGAGACGGTTTGCCAAGGCCCAGGAACAAAGAATTTGAACACGTCTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACTTTAGCATGTCAGGTTaGCACAATGAGAACATGGCT +
Preference number: 3 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDFSMSG*HNENMA
Trigger: AGCCATGTTCTCATTGTGCAAACCTGACATGCTAAA...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGGATGTATATCATTTGTaGATCATGGCACAGACAAAC +
Preference number: 3 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLDVYHL*IMAQTN
Trigger: GTTTGTCTGTGCCATGATCAACAAATGATATACATC...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp AAAACGTGGATGAAATATTGGCCTGAAAGTTATCATTaGGATGGATTAAACAACCACCACCGCCGGGCATGG +
Preference number: 3 (lower is better)
Translates to: KTWMKYWPESYH*DGLNNHHRRAW
Trigger: CCATGCCCGGCGGTGGTGGTTGTTTAATCCATCTCAATGATAACTTTCAGGCCAATATTTCATCCACGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATaGCCCACTTTCGGAATCCCCAGGTCCTTAAGATCT +
Preference number: 3 (lower is better)
Translates to: SSSLIPWRIRFI*PTFGIPRSLRS
Trigger: AGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
3UTR GCA 72 bp AACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTaGTTCAGAGGTGCTTATCTGTGCAGTAAATCACAA +
Preference number: 3 (lower is better)
Translates to: NFHPQQNISRER*FRGAYLCSKSQ
Trigger: TTGTGATTTACTGCACAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR GCA 72 bp AGTAATACTGTCAAGGGACAATGCTCACGTCAGCACTaGCCTGCAGAGAGAAAATCAAAGGTACAATTCTTG +
Preference number: 3 (lower is better)
Translates to: SNTVKGQCSRQH*PAERKSKVQFL
Trigger: CAAGAATTGTACCTTTGATTTTCTCTCTGCAGGGCAGTGCTGACGTGAGCATTGTCCCTTGACAGTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp AGAAATAAGCAAAAGTTATCCACCGTGGGTTCCATTTaGAGTGTAGCCCAAAGCCAGGAAACGGGTTTTGAA +
Preference number: 3 (lower is better)
Translates to: RNKQKLSTVGSI*SVAQSQETGFE
Trigger: TTCAAAACCCGTTTCCTGGCTTTGGGCTACACTGCAAATGGAACCCACGGTGGATAACTTTTGCTTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp CTGAGGTGCAGTGCTCACCACATTAGACATTTTATGTaGATTCAGTCCTCCTGTAATACAAAGGGAAAGACG +
Preference number: 3 (lower is better)
Translates to: LRCSAHHIRHFM*IQSSCNTKGKT
Trigger: CGTCTTTCCCTTTGTATTACAGGAGGACTGAATGCACATAAAATGTCTAATGTGGTGAGCACTGCACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGTGTGGGAATTTGCATTaGGAAAGCTGGAATAAGTTT +
Preference number: 3 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVCGNLH*ESWNKF
Trigger: AAACTTATTCCAGCTTTCCAAATGCAAATTCCCACA...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTGTTTCACAGGAAAAGTaGGCAAGGTACCCACCAGGT +
Preference number: 3 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIVSQEK*ARYPPG
Trigger: ACCTGGTGGGTACCTTGCCAACTTTTCCTGTGAAAC...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAGTCATGAAAGTGTCTTaGGTGTTCATCTATGGACCA +
Preference number: 3 (lower is better)
Translates to: ATARTVADRKIYTRVAEIVMKVS*VFIYGP
Trigger: TGGTCCATAGATGAACACCAAAGACACTTTCATGAC...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TGTTTCCACCTTCTCAACCACAGCAGTGTTTCCAAATaGGCCAACCCATCAATTCATTTCAACTGTCTAGGA +
Preference number: 3 (lower is better)
Translates to: CFHLLNHSSVSK*ANPSIHFNCLG
Trigger: TCCTAGACAGTTGAAATGAATTGATGGGTTGGCTCATTTGGAAACACTGCTGTGGTTGAGAAGGTGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp GTTGTTGTTGTTGTTTGTACTACGCACTGTTGGGAGTaGACCAGGGTTTCACACTTGCAGTATAAACACTCT +
Preference number: 3 (lower is better)
Translates to: VVVVVCTTHCWE*TRVSHLQYKHS
Trigger: AGAGTGTTTATACTGCAAGTGTGAAACCCTGGTTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp TCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTaGAAGTGTCATGAATTTGTGCCTTCCCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: SCGSAMSPHVFC*KCHEFVPSPNK
Trigger: TTTATTTGGGGAAGGCACAAATTCATGACACTTTCAGCAGAATACATGAGGTGACATTGCAGACCCACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp CAAGAAAAAGAAAGACAACTCAGGCAAGGAACATCGTaGATCAGATTTGCATCAGTCATAGTGAGCTATGGG +
Preference number: 3 (lower is better)
Translates to: QEKERQLRQGTS*IRFASVIVSYG
Trigger: CCCATAGCTCACTATGACTGATGCAAATCTGATGCACGATGTTCCTTGCCTGAGTTGTCTTTCTTTTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TATACAACCATTCTAAGTAATACTGTCAAGGGACAATaGTCACGTCAGCACTGCCCTGCAGAGAGAAAATCA +
Preference number: 3 (lower is better)
Translates to: YTTILSNTVKGQ*SRQHCPAERKS
Trigger: TGATTTTCTCTCTGCAGGGCAGTGCTGACGTGAGCATTGTCCCTTGACAGTATTACTTAGAATGGTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGACTTGGTTGTTGTTGTaGTTTGTACTACGCACTGTT +
Preference number: 3 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKTWLLL*FVLRTV
Trigger: AACAGTGCGTAGTACAAACAACAACAACAACCAAGT...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATATCACCTTCCACTTGGTaGTTGTTGTTGTTTGTACTA +
Preference number: 3 (lower is better)
Translates to: ATARTVADRKIYTRVAEISPSTW*LLLFVL
Trigger: TAGTACAAACAACAACAACAACCAAGTGGAAGGTGA...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp ACACTATCAAAACCGCCTTCACTGGGTCAGCAGCCCTaGTTGCTTCTCTTATATACACAACTTTCAAATATT +
Preference number: 3 (lower is better)
Translates to: TLSKPPSLGQQP*LLLLYTQLSNI
Trigger: AATATTTGAAAGTTGTGTATATAAGAGAAGCAAGCAGGGCTGCTGACCCAGTGAAGGCGGTTTTGATAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TTTGCATACCTAATGACTCACATAACATGCATGGGCTaGTATGTCCCTTCAAGCATGACAAGCATGAAGTAT +
Preference number: 3 (lower is better)
Translates to: FAYLMTHITCMG*YVPSSMTSMKY
Trigger: ATACTTCATGCTTGTCATGCTTGAAGGGACATAGCAGCCCATGCATGTTATGTGAGTCATTAGGTATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TCCAGTCTCCCTGATTGGGAAGCAAGTATTCTTAGTTaGAGAGGCATCTCTTATAACATCAAGGGCTTATTT +
Preference number: 3 (lower is better)
Translates to: SSLPDWEASILS*RGISYNIKGLF
Trigger: AAATAAGCCCTTGATGTTATAAGAGATGCCTCTGCAACTAAGAATACTTGCTTCCCAATCAGGGAGACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp GGACTTATCTTTGGAAAGTGTCCATTGTGCACAACCTaGGTAAAATGTGAGACATACTTACATGGTCAGGAA +
Preference number: 3 (lower is better)
Translates to: GLIFGKCPLCTT*VKCETYLHGQE
Trigger: TTCCTGACCATGTAAGTATGTCTCACATTTTACCCAGGTTGTGCACAATGGACACTTTCCAAAGATAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAAATTTGCACTGTTTCTaGGATGAGCTGACCTGGGCC +
Preference number: 3 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRNLHCF*DELTWA
Trigger: GGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATT...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGATACTGTTAACACAGTaGCAGGCACACATAGGAACC +
Preference number: 3 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWILLTQ*QAHIGT
Trigger: GGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTAT...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGACCAAACAGTTGCTTTaGCCTGATAATGTTTGCACA +
Preference number: 3 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMTKQLL*PDNVCT
Trigger: TGTGCAAACATTATCAGGCAAAAGCAACTGTTTGGT...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp ACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCAACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCA +
Preference number: 3 (lower is better)
Translates to: TLALCERLCFCCFFWYNPTTSRI*SSKDGA
Trigger: TGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGT...TGGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR-3UTR CAA 90 bp ATGAAGATTTCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTAAGACTGTGCTTTTGTaGTTTCTTTTGGTACAATCC +
Preference number: 3 (lower is better)
Translates to: MKISLYSPKLSRSSQAATKTVLL*FLLVQS
Trigger: GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTT...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGAAATCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR TCA 72 bp CATGAGTCAGAATGCATAAAAGGTGTCAGCGGGAACTaGAAAGATTACCAAACAAAAAGCAGCCAATCATTG +
Preference number: 3 (lower is better)
Translates to: HESECIKGVSGN*KDYQTKSSQSL
Trigger: CAATGATTGGCTGCTTTTTGTTTGGTAATCTTTTCAGTTCCCGCTGACACCTTTTATGCATTCTGACTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp TTTGTTCCTGGGCCTTGGCAAACCGTCTCAAGTTCCTaGACTATCTATGTTTTTAACAGATTCTCACTTTTT +
Preference number: 3 (lower is better)
Translates to: FVPGPWQTVSSS*TIYVFNRFSLF
Trigger: AAAAAGTGAGAATCTGTTAAAAACATAGATAGTGCAGGAACTTGAGACGGTTTGCCAAGGCCCAGGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CCA 72 bp AATTTAGCAAAAATATGCCTGCTTTCAGAGTTCAAATaGCACACTCGCTTTTCTTACAATCATCCCGGTTCT +
Preference number: 3 (lower is better)
Translates to: NLAKICLLSEFK*HTRFSYNHPGS
Trigger: AGAACCGGGATGATTGTAAGAAAAGCGAGTGTGCCATTTGAACTCTGAAAGCAGGCATATTTTTGCTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp GCCAACCCATCAATTCATTTCAACTGTCTAGGAAACTaGAAATATATTGAATCCCCTCTGACATTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: ANPSIHFNCLGN*KYIESPLTFCH
Trigger: ATGGCAAAATGTCAGAGGGGATTCAATATATTTTCAGTTTCCTAGACAGTTGAAATGAATTGATGGGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR-3UTR CAA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAGAATATGTGAGGACCTaGACTGACAGCTATATTCAT +
Preference number: 3 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNREYVRT*TDSYIH
Trigger: ATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR TCA 72 bp GCTTCACAGGTGAAGCTTAACATTGAAACTACTAAGTaGTTCGTTTATTTTCAGCTCAAAAGTCTTGATAGG +
Preference number: 3 (lower is better)
Translates to: ASQVKLNIETTK*FVYFQLKSLDR
Trigger: CCTATCAAGACTTTTGAGCTGAAAATAAACGAATCACTTAGTAGTTTCAATGTTAAGCTTCACCTGTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR GCA 72 bp AAGACTAAATGTCACACAACCTCCTTCTCCCTGGTTTaGTTACATATTGAACTGCATTATTCTACTTTGATA +
Preference number: 3 (lower is better)
Translates to: KTKCHTTSFSLV*LHIELHYSTLI
Trigger: TATCAAAGTAGAATAATGCAGTTCAATATGTAAGCAAACCAGGGAGAAGGAGGTTGTGTGACATTTAGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCTCCCAGGCCGGGCTCTaGGCTCCAAGCACGGGGCGC +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLSQAGL*APSTGR
Trigger: GCGCCCCGTGCTTGGAGCCCAGAGCCCGGCCTGGGA...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTCCGGTCCTGCAGCAGTaGGGGAAACCGCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGPVLQQ*GKPRWP
Trigger: GGGCCAGCGCGGTTTCCCCCACTGCTGCAGGACCGG...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGACACGTTACAGAAGGTaGGCCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWTRYRR*AGRGSR
Trigger: CCTGCTCCCACGCCCGGCCCACCTTCTGTAACGTGT...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGTTCTCTGCTCTGCACTaGCTTCAGAGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: DQRQSQFGDGHSLPGHQEFSALH*LQRADP
Trigger: TGGATCAGCTCTCTGAAGTCAGTGCAGAGCAGAGAA...CTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATGCAGAGCCGCATCTGTaGCACTTCCTCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QDAQACYECWDLNSSLPDAEPHL*HFLCCQ
Trigger: CTGGCAACAGAGGAAGTGTCACAGATGCGGCTCTGC...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGATCCTCTCCCGGTCCTaGAGCAGTGGGGGAAACCGC +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLILSRS*SSGGNR
Trigger: GCGGTTTCCCCCACTGCTGCAGGACCGGGAGAGGAT...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATGAGGGTGGTGCTGGCTaGCGGCCCCGGCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYEGGAG*RPRPSS
Trigger: AGAGGATGGCCGGGGCCGGCAGCCAGCACCACCCTC...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGGTGCCTTCTCCACTTTaGCAACGAAGTCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: DSKCSGKRGLALFRACEQVPSPL*QRSPSR
Trigger: CCGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCAC...CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 72 bp GACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTaGCCTGGGCATCAGGAGACTGAGATGTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DQRQSQFGDGHS*PGHQETEMWFW
Trigger: CCAAAACCACATCTCAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 72 bp GGAGATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGT +
Preference number: 4 (lower is better)
Translates to: GDSKCSGKRGLA*FRACEQAFTAC
Trigger: ACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp CCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGACAGCTTCTCTAGTATCTaGGGGAGTTGGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: PATESVWGWPQLAWASGDSFSSI*GSWVSS
Trigger: TGATGACACCCAACTCCCTCAGATACTAGAGAAGCT...GTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGGGGATGGCCACAGCTTaGCTGGGCATCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLGMATA*LGIRRL
Trigger: CAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCC...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGGCTTCACCATCCACCTaGACTGGGACTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTASPST*TGTPSS
Trigger: CGACGAGGGAGTCCCAGTGCAGGTGGATGGTGAAGC...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TCTTGTACGATCTCTGTAGTAGCTCCCGGGTCCCAAGGACTCCGTACCACATCATCACAGGACAGGCCGTaGGAGGTCACTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCTISVVAPGSQGLRTTSSQDRP*EVTPER
Trigger: TCTCTCTGGAGTGACCTCCCACGGCCTGTCCTGTGA...TGATGTGGTACGGAGTCCTTGGGACCCGGGAGCTACTACAGAGATCGTACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGAGTCAGTTTGGGGATaGCCACAGCTTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQESVWG*PQLAWA
Trigger: TGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTC...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGGGTGGTGGCCATGGCTaGACCAGCGACAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLGGGHG*TSDRVS
Trigger: ACTGACTCTGTCGCTGGTCCAGCCATGGCCACCACC...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGGCAGAGCCGCATCTGTaGCACTTCCTCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTAEPHL*HFLCCQ
Trigger: CTGGCAACAGAGGAAGTGTCACAGATGCGGCTCTGC...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGTCAGTGTTCTGTCCTGTaGCTTCTCCACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GKRGLALFRACEQAFTACQCSVL*LLHFGN
Trigger: GTTGCCAAAGTGGAGAAGGCACAGGACAGAACACTG...ACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGACACGTTACAGAAGGTaGGCCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISTRYRR*AGRGSR
Trigger: CCTGCTCCCACGCCCGGCCCACCTTCTGTAACGTGT...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GATTCCAAGTGCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGCCAGCATTTTGGTACTaGCTCGTTCCAGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: DSKCSGKRGLALFRACEQPAFWY*LVPASL
Trigger: TAGAGAAGCTGGAACGAGCCAGTACCAAAATGCTGG...CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGCACTTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 72 bp GGGCAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTaGAACTCCAGTCTCCCTGATTGGGAAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: GQDAQACYECWD*NSSLPDWEASI
Trigger: AATACTTGCTTCCCAATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp TCTTCAATGACTTGCCTCACCGCTTTCTTTAGACTGTaGGCCCGCAGCATTATCTCCCGGGGCTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SSMTCLTAFFRL*ARSIISRGFTA
Trigger: AGCCGTGAAGCCCCGGGAGATAATGCTGCGGGCCAACAGTCTAAAGAAAGCGGTGAGGCAAGTCATTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp GGTGGCCATGGCTGGACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCACTGCACATCTTTTATaGGCCTTGAACTTACACACT +
Preference number: 4 (lower is better)
Translates to: GGHGWTSDRVSLGMATACTAHLL*ALNLHT
Trigger: AGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGT...GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp CGTGGGTTGGCTTTGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGTGCCAGCTCTTTGCAGGCAGTGTaGACCATTGTCTTACACCAA +
Preference number: 4 (lower is better)
Translates to: RGLALFRACEQAFTACASSLQAV*TIVLHQ
Trigger: TTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGA...GCTGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTGCTTCACCATCCACCTaGACTGGGACTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGASPST*TGTPSS
Trigger: CGACGAGGGAGTCCCAGTGCAGGTGGATGGTGAAGC...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTGGAGGCTGGACCCATaGTTCACCATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLWRLDP*FTIHLH
Trigger: GTGCAGGTGGATGGTGAAGCATGGGTCCAGCCTCCA...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACACACGTTACAGAAGGTaGGCCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDTRYRR*AGRGSR
Trigger: CCTGCTCCCACGCCCGGCCCACCTTCTGTAACGTGT...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGCGATGGAGGCCAGCGTaGTCCATTTGCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWRWRPA*SICSCL
Trigger: CAAACAACTGCAAATGGACCACGCTGGCCTCCATCG...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCGGTTTTCTTTGGTGGTaGCCATGGCTGGACCAGCGA +
Preference number: 4 (lower is better)
Translates to: RNPQVLKISSFQMQKFSPGFLWW*PWLDQR
Trigger: TCGCTGGTCCAGCCATGGCCACCACCAAAGAAAACC...GGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCGGAGGTTTTCTTTGGTaGTGGCCATGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSGGFLW*WPWLDQ
Trigger: CTGGTCCAGCCATGGCCACCACCAAAGAAAACCTCC...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp CAGATGATTCTAGTGTTGAGCACAGGGAGGTTTTCTTaGGTGGTGGCCATGGCTGGACCAGCGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QMILVLSTGRFS*VVAMAGPATES
Trigger: TGACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAGAAAACCTCCCTGTGCTCAACACTAGAATCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGGTGTCATCATCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQGVIII*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGATGATGACACC...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GCAAGTCCTGCTCTCAAACCTGGGCAGATGATTCTAGTGTTGAGCACAGGGAGGGGTGTCATCATCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ASPALKPGQMILVLSTGRGVIII*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGATGATGACACC...CCTCCCTGTGCTCAACACTAGAATCATCTGCCCAGGTTTGAGAGCAGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTAGTCACAAGACGGACTaGCTGGCTCAGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCSHKTD*LAQRAA
Trigger: TGCAGCCCTCTGAGCCAGTCAGTCCGTCTTGTGACT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCAGTCACAAGACGGACTaGCTGGCTCAGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKISHKTD*LAQRAA
Trigger: TGCAGCCCTCTGAGCCAGTCAGTCCGTCTTGTGACT...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGGCAGAGCCGCATCTGTaGCACTTCCTCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLAEPHL*HFLCCQ
Trigger: CTGGCAACAGAGGAAGTGTCACAGATGCGGCTCTGC...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp TTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTTGTGTCCTTGCAAGCACAAGATCCTCTCCCGGTCCTaGAGCAGTGGGGGAAACCGC +
Preference number: 4 (lower is better)
Translates to: LLLPDNVCTEGLCPCKHKILSRS*SSGGNR
Trigger: GCGGTTTCCCCCACTGCTGCAGGACCGGGAGAGGAT...CTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GCAAGTCCTGCTCTCAAACCTGGGCAGATGATTCTAGTGTTGAGCACAGGGAGGCCAGCGTGGTCCATTTaGAGTTGTTTGTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ASPALKPGQMILVLSTGRPAWSI*SCLLPS
Trigger: TGAGGGCAACAAACAACTGCAAATGGACCACGCTGG...CCTCCCTGTGCTCAACACTAGAATCATCTGCCCAGGTTTGAGAGCAGGACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GGCATCAAACCTGTTGCCAGACCTGCTGAGCCATCTTGTCTGCGCCAACAGTCTGATGGTACACATCTTTaGAGGCAGTGTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GIKPVARPAEPSCLRQQSDGTHL*RQCAPL
Trigger: CAATGGTGCACACTGCCTGCAAAGATGTGTACCATC...AGACTGTTGGCGCAGACAAGATGGCTCAGCAGGTCTGGCAACAGGTTTGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAACAGTGTTCTGTCCTGTaGCTTCTCCACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQQCSVL*LLHFGN
Trigger: GTTGCCAAAGTGGAGAAGGCACAGGACAGAACACTG...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGCTCAGAGGGCTGCACTaGTGGCTCATCCATAACTTT +
Preference number: 4 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWLRGLH*WLIHNF
Trigger: AAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAG...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGACTGGCTCAGAGGGCTaGACTGCTGGCTCATCCATA +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLTGSEG*TAGSSI
Trigger: TATGGATGAGCCAGCAGTGCAGCCCTCTGAGCCAGT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGGGATGGCCACAGCTTaGCTGGGCATCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDGMATA*LGIRRL
Trigger: CAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGGGGATGGCCACAGCTTaGCTGGGCATCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRGMATA*LGIRRL
Trigger: CAGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCC...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTGGAGGCTGGACCCATaGTTCACCATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLWRLDP*FTIHLH
Trigger: GTGCAGGTGGATGGTGAAGCATGGGTCCAGCCTCCA...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTGGAGGCTGGACCCATaGTTCACCATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKIWRLDP*FTIHLH
Trigger: GTGCAGGTGGATGGTGAAGCATGGGTCCAGCCTCCA...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGAGTGCAAAGGGACCCTaGCAACTAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLSAKGP*QLAKPL
Trigger: CAGAGGCTTTGCTAGTTGGCAGGGTCCCTTTGCACT...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTTACGGATCAGCTTCTaGGGCCCCTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYLRISF*GPSCSA
Trigger: AGCGGAGCAGGAGGGGCCCCAGAAGCTGATCCGTAA...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTCACAGGACAGGCCGTaGGAGGTCACTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLSQDRP*EVTPER
Trigger: TCTCTCTGGAGTGACCTCCCACGGCCTGTCCTGTGA...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGAGTCAGTTTGGGGATaGCCACAGCTTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLESVWG*PQLAWA
Trigger: TGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTCTTTGGTGGTGGCCATaGCTGGACCAGCGACAGAGT +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCLWWWP*LDQRQS
Trigger: ACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAG...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGGTTTTCTTTGGTGGTaGCCATGGCTGGACCAGCGA +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLGFLWW*PWLDQR
Trigger: TCGCTGGTCCAGCCATGGCCACCACCAAAGAAAACC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGGGTTTTCTTTGGTGGTaGCCATGGCTGGACCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLGFLWW*PWLDQR
Trigger: TCGCTGGTCCAGCCATGGCCACCACCAAAGAAAACC...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGGAGGTTTTCTTTGGTaGTGGCCATGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLGGFLW*WPWLDQ
Trigger: CTGGTCCAGCCATGGCCACCACCAAAGAAAACCTCC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGATGATCCCTGGAGGCTaGACCCATGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLMIPGG*THASPS
Trigger: GGATGGTGAAGCATGGGTCCAGCCTCCAGGGATCAT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGCTGACTTCAGAGAGCTaGTCCAGACCTCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLLTSES*SRPPSL
Trigger: AAGAGATGGAGGTCTGGATCAGCTCTCTGAAGTCAG...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAAGAAATGTTCCACATTaGACTGGGCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQRNVPH*TGPPHR
Trigger: CCTATGAGGTGGCCCAGTTCAATGTGGAACATTTCT...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TTTTCAGCTTCTTCAATGACTTGCCTCACCGCTTTCTTTAGACTGTTGGCCCGCCATCCTCGTCCTCTATaGTGTCCTTCCCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: FSASSMTCLTAFFRLLARHPRPL*CPSRWR
Trigger: CCTCCATCGGGAAGGACATCATAGAGGACGAGGATG...GCGGGCCAACAGTCTAAAGAAAGCGGTGAGGCAAGTCATTGAAGAAGCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGACACCAAGAGGGGGCTaGCACAGAACGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKTPRGG*HRTKRL
Trigger: CAACCTTTTCGTTCTGTGTCAGCCCCCTCTTGGTGT...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGGGTGTCATCATCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLGVIII*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGATGATGACACC...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp CCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCCTGGGCATCAGGAGACAGCTGGCACTGTTTATaGAAGTTCAGTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: PATESVWGWPQLAWASGDSWHCL*KFSLSI
Trigger: GATTGATAAACTGAACTTGCATAAACAGTGCCAGCT...GTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GGTGGCCATGGCTGGACCAGCGACAGAGTCAGTTTGGGGATGGCCACAGCTTGCTTTCGTAAGATGGTTTaGAACGGAGTCTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: GGHGWTSDRVSLGMATACFRKMV*NGVFIN
Trigger: ATTTATGAAGACTCCGTTGCAAACCATCTTACGAAA...GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCTGGTCCAGCCATGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTACTGGCTCAGAGGGCTaGACTGCTGGCTCATCCATA +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCTGSEG*TAGSSI
Trigger: TATGGATGAGCCAGCAGTGCAGCCCTCTGAGCCAGT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGGAGGCAGCAAGTCCTaGTCTCAAACCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLGGSKS*SQTWAD
Trigger: ATCTGCCCAGGTTTGAGAGCAGGACTTGCTGCCTCC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCGCTTCACCATCCACCTaGACTGGGACTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFASPST*TGTPSS
Trigger: CGACGAGGGAGTCCCAGTGCAGGTGGATGGTGAAGC...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TTGTTTGTAAATGCAATGTCAAGGGTTACCAGATTGGATGTCTCTTTTTCATGGCCGGTCCTGCAGCAGTaGGGGAAACCGCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LFVNAMSRVTRLDVSFSWPVLQQ*GKPRWP
Trigger: GGGCCAGCGCGGTTTCCCCCACTGCTGCAGGACCGG...CCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATGAAGATTTCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTACACGTTACAGAAGGTaGGCCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MKISLYSPKLSRSSQAATTRYRR*AGRGSR
Trigger: CCTGCTCCCACGCCCGGCCCACCTTCTGTAACGTGT...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGAAATCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTCACAGGACAGGCCGTaGGAGGTCACTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQSQDRP*EVTPER
Trigger: TCTCTCTGGAGTGACCTCCCACGGCCTGTCCTGTGA...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCATGGAGACTTTACACTaGCCAAGGGGACAGACGGGA +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLMETLH*PRGQTG
Trigger: TCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCAT...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGGTGCCTTCTCCACTTTaGCAACGAAGTCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLVPSPL*QRSPSR
Trigger: CCGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCAC...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCGGTGGTGGCCATGGCTaGACCAGCGACAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPGGGHG*TSDRVS
Trigger: ACTGACTCTGTCGCTGGTCCAGCCATGGCCACCACC...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCCTTTGGTGGTGGCCATaGCTGGACCAGCGACAGAGT +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFLWWWP*LDQRQS
Trigger: ACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAG...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGGAGGTTTTCTTTGGTaGTGGCCATGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLGGFLW*WPWLDQ
Trigger: CTGGTCCAGCCATGGCCACCACCAAAGAAAACCTCC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGCAGGGAGGTTTTCTTTaGTGGTGGCCATGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLQGGFL*WWPWLD
Trigger: GTCCAGCCATGGCCACCACCAAAGAAAACCTCCCTG...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGCAGGGAGGTTTTCTTTaGTGGTGGCCATGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVQGGFL*WWPWLD
Trigger: GTCCAGCCATGGCCACCACCAAAGAAAACCTCCCTG...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTCAGGGAGGTTTTCTTTaGTGGTGGCCATGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLQGGFL*WWPWLD
Trigger: GTCCAGCCATGGCCACCACCAAAGAAAACCTCCCTG...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTATGATCCCTGGAGGCTaGACCCATGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLMIPGG*THASPS
Trigger: GGATGGTGAAGCATGGGTCCAGCCTCCAGGGATCAT...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCTTCTCTGCTCTGCACTaGCTTCAGAGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLFSALH*LQRADP
Trigger: TGGATCAGCTCTCTGAAGTCAGTGCAGAGCAGAGAA...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGTGGGCATCAGGAGACTaGGATGTGGTTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKWASGD*DVVLAD
Trigger: ATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCA...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLFVQGV*AGIHCM
Trigger: CATGCAGTGAATGCCTGCTCACACGCCCTGAACAAA...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCAGAATTCGCTTCATATaGCCCACTTTCGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSRIRFI*PTFGIP
Trigger: GGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCT...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GGCTCAGAGGGCTGCACTGCTGGCTCATCCATAACTTTTTCAGCTTCTTCAATGCAGAGAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSEGCTAGSSITFSASSMQRDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTCTCTG...CATTGAAGAAGCTGAAAAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCAGAGAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKQRDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTCTCTG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCCAGCGTGGTCCATTTaGAGTTGTTTGTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLPAWSI*SCLLPS
Trigger: TGAGGGCAACAAACAACTGCAAATGGACCACGCTGG...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGCCAGCGTGGTCCATTTaGAGTTGTTTGTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLPAWSI*SCLLPS
Trigger: TGAGGGCAACAAACAACTGCAAATGGACCACGCTGG...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCCACTCACAGGCAAGTTaGCTTCGAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFHSQAS*LRATGE
Trigger: CTCACCAGTGGCTCGAAGGCAACTTGCCTGTGAGTG...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGCACTCACAGGCAAGTTaGCTTCGAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRHSQAS*LRATGE
Trigger: CTCACCAGTGGCTCGAAGGCAACTTGCCTGTGAGTG...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTGCAGGCGAAGCACACTaGCACAGGTTTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGAGEAH*HRFCHR
Trigger: TCTGTGACAAAACCTGTGGCAGTGTGCTTCGCCTGC...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGGCAGGCGAAGCACACTaGCACAGGTTTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISAGEAH*HRFCHR
Trigger: TCTGTGACAAAACCTGTGGCAGTGTGCTTCGCCTGC...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GGCTCAGAGGGCTGCACTGCTGGCTCATCCATAACTTTTTCAGCTTCTTCAATGAGGCATTTCCAATCTTaGAGGCGAAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: GSEGCTAGSSITFSASSMRHFQS*RRSTLP
Trigger: TGGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCT...CATTGAAGAAGCTGAAAAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp CTCCTGCTCCAGGAGACAGTGAATCGTGGCTGCGTCACAAATCCTAGTGATGAGGATATGACCACCGCATaGTCATCAGAGTTGACGATT +
Preference number: 4 (lower is better)
Translates to: LLLQETVNRGCVTNPSDEDMTTA*SSELTI
Trigger: AATCGTCAACTCTGATGAGCATGCGGTGGTCATATC...CTCATCACTAGGATTTGTGACGCAGCCACGATTCACTGTCTCCTGGAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCAGTGTTCTGTCCTGTaGCTTCTCCACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLQCSVL*LLHFGN
Trigger: GTTGCCAAAGTGGAGAAGGCACAGGACAGAACACTG...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGCTCAGAGGGCTGCACTaGTGGCTCATCCATAACTTT +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLLRGLH*WLIHNF
Trigger: AAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAG...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCACTGGCTCAGAGGGCTaGACTGCTGGCTCATCCATA +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFTGSEG*TAGSSI
Trigger: TATGGATGAGCCAGCAGTGCAGCCCTCTGAGCCAGT...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATGGAGGCAGCAAGTCCTaGTCTCAAACCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYGGSKS*SQTWAD
Trigger: ATCTGCCCAGGTTTGAGAGCAGGACTTGCTGCCTCC...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTACAGTCGGGTGCACACCTGAGCATCTCTCTCTACTTAAGTGGATGTGGCTGGACAGTGAATCGTGGCTaGGTCACAAATCCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: LQSGAHLSISLYLSGCGWTVNRG*VTNPSD
Trigger: ATCACTAGGATTTGTGACGCAGCCACGATTCACTGT...CCAGCCACATCCACTTAAGTAGAGAGAGATGCTCAGGTGTGCACCCGACTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTCGATGGAGGCCAGCGTaGTCCATTTGCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLRWRPA*SICSCL
Trigger: CAAACAACTGCAAATGGACCACGCTGGCCTCCATCG...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTATGGAGACTTTACACTaGCCAAGGGGACAGACGGGA +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGMETLH*PRGQTG
Trigger: TCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCAT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTATGGAGACTTTACACTaGCCAAGGGGACAGACGGGA +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLMETLH*PRGQTG
Trigger: TCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCAT...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGGTGCCTTCTCCACTTTaGCAACGAAGTCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISVPSPL*QRSPSR
Trigger: CCGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCAC...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAACTGAGATGTGGTTTTaGCTGATAGCGACTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQTEMWF*LIATLS
Trigger: CGAAAGAGTCGCTATCAGCCAAAACCACATCTCAGT...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCGAGTCAGTTTGGGGATaGCCACAGCTTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFESVWG*PQLAWA
Trigger: TGCCCAGGCAAGCTGTGGCCATCCCCAAACTGACTC...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CAA 72 bp GTCCCCAGAACTCAGGCTGGGATCTCAGCCACGACCTaGAAAAATTCCTGGATGTCAAGTCTTACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VPRTQAGISATT*KNSWMSSLTSA
Trigger: TGCACTTGTAAGACTTGACATCCAGGAATTTTTCAAGGTCGTGGCTGAGATCCCAGCCTGAGTTCTGGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp TTGGATTTTGCTCTGCTATGGGTGGAGCCAAGCCCCTaGCCTGTCCTAAGCAAACACTTTGCCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: LDFALLWVEPSP*PVLSKHFATEL
Trigger: AAGTTCAGTGGCAAAGTGTTTGCTTAGGACAGGCAAGGGGCTTGGCTCCACCCATAGCAGAGCAAAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GGAGGCCATCCAACAATGCTTCACAAAACTGTGAATTaGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GGHPTMLHKTVN*HCFLDELTWAV
Trigger: CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAGCATTGTTGGATGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GCATCGAGAGGAGCCTTGTTGTGGGTGACTCAACTGTaGAACAATTTGACCGTATCAGTACCAGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ASRGALLWVTQL*NNLTVSVPASW
Trigger: CCAGGATGCTGGTACTGATACGGTCAAATTGTTCAACAGTTGAGTCACCCACAACAAGGCTCCTCTCGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GTTGCCCCGAAAGGATCGATGTTCGCCAGCAACATTTaGTTGATGATAGAACTCCCAGCAATGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VAPKGSMFASNI*LMIELPAMEAA
Trigger: TGCTGCCTCCATTGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGCGAACATCGATCCTTTCGGGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGCGCAACACTGGCATCTaGGAGGTCAACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLRNTGI*EVNFIK
Trigger: TTTGATGAAGTTGACCTCTCAGATGCCAGTGTTGCG...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGCTGACTTCAGAGAGCTaGTCCAGACCTCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLLTSES*SRPPSL
Trigger: AAGAGATGGAGGTCTGGATCAGCTCTCTGAAGTCAG...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTTTCTCTGCTCTGCACTaGCTTCAGAGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLFSALH*LQRADP
Trigger: TGGATCAGCTCTCTGAAGTCAGTGCAGAGCAGAGAA...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGAGAAATGTTCCACATTaGACTGGGCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLRNVPH*TGPPHR
Trigger: CCTATGAGGTGGCCCAGTTCAATGTGGAACATTTCT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGAGAAATGTTCCACATTaGACTGGGCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKRNVPH*TGPPHR
Trigger: CCTATGAGGTGGCCCAGTTCAATGTGGAACATTTCT...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATACATCCTCGTCCTCTATaGTGTCCTTCCCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: ATARTVADRKIYTRVAEIHPRPL*CPSRWR
Trigger: CCTCCATCGGGAAGGACATCATAGAGGACGAGGATG...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCATCCTCGTCCTCTATaGTGTCCTTCCCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPHPRPL*CPSRWR
Trigger: CCTCCATCGGGAAGGACATCATAGAGGACGAGGATG...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACACACCAAGAGGGGGCTaGCACAGAACGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDTPRGG*HRTKRL
Trigger: CAACCTTTTCGTTCTGTGTCAGCCCCCTCTTGGTGT...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GGATGTAATAAAGCCAGGGAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGACACCAAGAGGGGGCTaGCACAGAACGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GCNKARESPLTSEAPSPQTPRGG*HRTKRL
Trigger: CAACCTTTTCGTTCTGTGTCAGCCCCCTCTTGGTGT...CTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTCCCTGGCTTTATTACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGGGTGTCATCATCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISGVIII*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGATGATGACACC...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTAGTCACAAGACGGACTaGCTGGCTCAGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGASHKTD*LAQRAA
Trigger: TGCAGCCCTCTGAGCCAGTCAGTCCGTCTTGTGACT...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTTGGGCATCAGGAGACTaGGATGTGGTTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGWASGD*DVVLAD
Trigger: ATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCA...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGTGGGCATCAGGAGACTaGGATGTGGTTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVWASGD*DVVLAD
Trigger: ATCAGCCAAAACCACATCTCAGTCTCCTGATGCCCA...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTCCATCACACTCAAGTTaGACCCTCTGCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGPSHSS*TLCSRF
Trigger: GAATCTGGAGCAGAGGGTTCAACTTGAGTGTGATGG...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGTCTCTGGTTAGCATCTaGGCTCTGTTTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLSLVSI*ALFLCT
Trigger: TGTGCACAAAAACAGAGCTCAGATGCTAACCAGAGA...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGTCTCTGGTTAGCATCTaGGCTCTGTTTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTSLVSI*ALFLCT
Trigger: TGTGCACAAAAACAGAGCTCAGATGCTAACCAGAGA...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQFVQGV*AGIHCM
Trigger: CATGCAGTGAATGCCTGCTCACACGCCCTGAACAAA...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTGTACTCTCCCAAATTaGGCAGATCCAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKICTLPN*ADPAKQ
Trigger: CTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACA...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTCAGAGAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCQRDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTCTCTG...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCCACTCACAGGCAAGTTaGCTTCGAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFHSQAS*LRATGE
Trigger: CTCACCAGTGGCTCGAAGGCAACTTGCCTGTGAGTG...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GCAACAGCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATACACTCACAGGCAAGTTaGCTTCGAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ATARTVADRKIYTRVAEIHSQAS*LRATGE
Trigger: CTCACCAGTGGCTCGAAGGCAACTTGCCTGTGAGTG...TATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGCAGGCGAAGCACACTaGCACAGGTTTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDAGEAH*HRFCHR
Trigger: TCTGTGACAAAACCTGTGGCAGTGTGCTTCGCCTGC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGCAGGCGAAGCACACTaGCACAGGTTTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQAGEAH*HRFCHR
Trigger: TCTGTGACAAAACCTGTGGCAGTGTGCTTCGCCTGC...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGATGGTACACATCTTTaGAGGCAGTGTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLDGTHL*RQCAPL
Trigger: CAATGGTGCACACTGCCTGCAAAGATGTGTACCATC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GGCTCAGAGGGCTGCACTGCTGGCTCATCCATAACTTTTTCAGCTTCTTCAATGGATGGTACACATCTTTaGAGGCAGTGTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GSEGCTAGSSITFSASSMDGTHL*RQCAPL
Trigger: CAATGGTGCACACTGCCTGCAAAGATGTGTACCATC...CATTGAAGAAGCTGAAAAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTAAAATTCTTCAGTTaGTGCCACAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQVKFFS*CHRFRK
Trigger: CTTCCTGAACCTGTGGCAGCAACTGAAGAATTTTAC...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGGATATGACCACCGCATaGTCATCAGAGTTGACGATT +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTDMTTA*SSELTI
Trigger: AATCGTCAACTCTGATGAGCATGCGGTGGTCATATC...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGCAGTGTTCTGTCCTGTaGCTTCTCCACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISQCSVL*LLHFGN
Trigger: GTTGCCAAAGTGGAGAAGGCACAGGACAGAACACTG...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTCCCAAGACTTCAGGGTaGTTTCAAAGGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCPKTSG*FQRLCL
Trigger: GAGACAGAGCCTTTGAAAGCACCCTGAAGTCTTGGG...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGAGTGCAAAGGGACCCTaGCAACTAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQSAKGP*QLAKPL
Trigger: CAGAGGCTTTGCTAGTTGGCAGGGTCCCTTTGCACT...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGTGCCCCAATTCAGGCTaGGAACTTGTTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTCPNSG*ELVFCF
Trigger: GAAACAGAAAACAAGTTCGCAGCCTGAATTGGGGCA...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGCAGCAACTTCCTCTGTaGCCCAATTCAGGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQQQLPL*PNSGCE
Trigger: TTCGCAGCCTGAATTGGGGCACAGAGGAAGTTGCTG...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTGCATCTGTCCAGAGGTaGACACTTTACGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCASVQR*TLYGSA
Trigger: AGCTGATCCGTAAAGTGTCCACCTCTGGACAGATGC...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCACAGGACAGGCCGTaGGAGGTCACTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGASQDRP*EVTPER
Trigger: TCTCTCTGGAGTGACCTCCCACGGCCTGTCCTGTGA...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGTGCCTTCTCCACTTTaGCAACGAAGTCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDVPSPL*QRSPSR
Trigger: CCGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCAC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGACTGAGATGTGGTTTTaGCTGATAGCGACTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTTEMWF*LIATLS
Trigger: CGAAAGAGTCGCTATCAGCCAAAACCACATCTCAGT...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCACAGGAGACTGAGATGTaGTTTTGGCTGATAGCGACT +
Preference number: 4 (lower is better)
Translates to: PFTEQATSYQHCEQPSAAQETEM*FWLIAT
Trigger: AGTCGCTATCAGCCAAAACCACATCTCAGTCTCCTG...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCATGATCCCTGGAGGCTaGACCCATGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFMIPGG*THASPS
Trigger: GGATGGTGAAGCATGGGTCCAGCCTCCAGGGATCAT...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCAAAGGCTCTGTCTCTaGTTAGCATCTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKQRLCL*LASELC
Trigger: ACAGAGCTCAGATGCTAACCAGAGACAGAGCCTTTG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCCAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFQSVRH*TPALRE
Trigger: CTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTG...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPQSVRH*TPALRE
Trigger: CTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTG...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
3UTR CAA 72 bp GCTCATTCAGCTTCACCTTCCACTTGGTTGTTGTTGTaGTTTGTACTACGCACTGTTGGGAGTGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: AHSASPSTWLLL*FVLRTVGSEPG
Trigger: CCCTGGTTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAACCAAGTGGAAGGTGAAGCTGAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACTTCTCTGCTCTGCACTaGCTTCAGAGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDFSALH*LQRADP
Trigger: TGGATCAGCTCTCTGAAGTCAGTGCAGAGCAGAGAA...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTGGACAAGAAATGTTCCACATTaGACTGGGCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: ESPLTSEAPSPQSVRHWTRNVPH*TGPPHR
Trigger: CCTATGAGGTGGCCCAGTTCAATGTGGAACATTTCT...TGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTCATCCTCGTCCTCTATaGTGTCCTTCCCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAHPRPL*CPSRWR
Trigger: CCTCCATCGGGAAGGACATCATAGAGGACGAGGATG...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGCCATCACACTCAAGTTaGACCCTCTGCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQPSHSS*TLCSRF
Trigger: GAATCTGGAGCAGAGGGTTCAACTTGAGTGTGATGG...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGCAATTTAATGACCCTTaGTACTGCCATCTGCACACT +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTQFNDP*YCHLHT
Trigger: AGTGTGCAGATGGCAGTATCAAGGGTCATTAAATTG...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGATCTCCGTTAACTTCTaGAGCTCCATCTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLISVNF*SSISTE
Trigger: CTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGAT...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTATCTCCGTTAACTTCTaGAGCTCCATCTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGISVNF*SSISTE
Trigger: CTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGAT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTATCTCCGTTAACTTCTaGAGCTCCATCTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLISVNF*SSISTE
Trigger: CTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGAT...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATCCTCATAGGGTTCTCTaGTCTGCACTGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYPHRVL*SALTSE
Trigger: CTCTGAAGTCAGTGCAGAGCAGAGAACCCTATGAGG...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGCCAGCGTGGTCCATTTaGAGTTGTTTGTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRPAWSI*SCLLPS
Trigger: TGAGGGCAACAAACAACTGCAAATGGACCACGCTGG...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TTCGAAACATCTCAACGACTTCCCTCCAGAAAGAGTGCAGGCCTCACACCTTCCAACCATCAGAGTCTGTaGTATTTAGTGCAATCGGAG +
Preference number: 4 (lower is better)
Translates to: FETSQRLPSRKSAGLTPSNHQSL*YLVQSE
Trigger: CTCCGATTGCACTAAATAGCACAGACTCTGATGGTT...GGAAGGTGTGAGGCCTGCACTCTTTCTGGAGGGAAGTCGTTGAGATGTTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGCTCAGAGGGCTGCACTaGTGGCTCATCCATAACTTT +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRLRGLH*WLIHNF
Trigger: AAAGTTATGGATGAGCCAGCAGTGCAGCCCTCTGAG...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTCTTGATACTGCCATCTaGACACTGTCAAACACTGCG +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGLDTAI*TLSNTA
Trigger: CGCAGTGTTTGACAGTGTGCAGATGGCAGTATCAAG...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGCTTGATACTGCCATCTaGACACTGTCAAACACTGCG +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLLDTAI*TLSNTA
Trigger: CGCAGTGTTTGACAGTGTGCAGATGGCAGTATCAAG...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTCTTGATACTGCCATCTaGACACTGTCAAACACTGCG +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLLDTAI*TLSNTA
Trigger: CGCAGTGTTTGACAGTGTGCAGATGGCAGTATCAAG...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCCCCAAGACTTCAGGGTaGTTTCAAAGGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFPKTSG*FQRLCL
Trigger: GAGACAGAGCCTTTGAAAGCACCCTGAAGTCTTGGG...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTTTACGGATCAGCTTCTaGGGCCCCTCCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAILRISF*GPSCSA
Trigger: AGCGGAGCAGGAGGGGCCCCAGAAGCTGATCCGTAA...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGACCTTTGGAAAGAGCTaGTTTGCTTCAGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLTFGKS*FASAVV
Trigger: GACAACTGCTGAAGCAAACCAGCTCTTTCCAAAGGT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTTTGCTTCCGCAACACTaGCATCTGAGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCLLPQH*HLRGQL
Trigger: AAGTTGACCTCTCAGATGCCAGTGTTGCGGAAGCAA...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GCAAGTCCTGCTCTCAAACCTGGGCAGATGATTCTAGTGTTGAGCACAGGGAGGATCAAACACCTGAGCTaGGTTGAGCAACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ASPALKPGQMILVLSTGRIKHLS*VEQLFK
Trigger: TTTAAACAGTTGCTCAACCCAGCTCAGGTGTTTGAT...CCTCCCTGTGCTCAACACTAGAATCATCTGCCCAGGTTTGAGAGCAGGACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATGGTAGCACCCCAAGCTaGCACTGTTTATGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYGSTPS*HCLCKF
Trigger: GAACTTGCATAAACAGTGCCAGCTTGGGGTGCTACC...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCGGTAGCACCCCAAGCTaGCACTGTTTATGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFGSTPS*HCLCKF
Trigger: GAACTTGCATAAACAGTGCCAGCTTGGGGTGCTACC...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCCCAGCATTTTGGTACTaGCTCGTTCCAGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKIPAFWY*LVPASL
Trigger: TAGAGAAGCTGGAACGAGCCAGTACCAAAATGCTGG...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp ATTCTATTGAGCGACACTGACACGCCATGGTCTAGAAAAAGGGAAATAATATCTGGTGGTGGCCATGGCTaGACCAGCGACAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ILLSDTDTPWSRKREIISGGGHG*TSDRVS
Trigger: ACTGACTCTGTCGCTGGTCCAGCCATGGCCACCACC...AGATATTATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTCGCTCAATAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTCAAAGGCTCTGTCTCTaGTTAGCATCTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCQRLCL*LASELC
Trigger: ACAGAGCTCAGATGCTAACCAGAGACAGAGCCTTTG...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGGATGGATGTACAGGTTaGTTCGAAGAACTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLDGCTG*FEELAS
Trigger: GGAAGCCAGTTCTTCGAACCAACCTGTACATCCATC...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGATGGATGTACAGGTTaGTTCGAAGAACTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLDGCTG*FEELAS
Trigger: GGAAGCCAGTTCTTCGAACCAACCTGTACATCCATC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGCAGTTTATCAATCTCTaGCAAAACCCAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLQFINL*QNPAYT
Trigger: AGTGTAGGCTGGGTTTTGTCAGAGATTGATAAACTG...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCTCACTGGGGCGGAGGATGTAATAAAGCCAGGGAATCTCCGTTAACTTCTGAACAGTTTATCAATCTCTaGCAAAACCCAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: PHWGGGCNKARESPLTSEQFINL*QNPAYT
Trigger: AGTGTAGGCTGGGTTTTGTCAGAGATTGATAAACTG...TTCAGAAGTTAACGGAGATTCCCTGGCTTTATTACATCCTCCGCCCCAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATAGCTTCTCTAGTATCTaGGGGAGTTGGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYSFSSI*GSWVSS
Trigger: TGATGACACCCAACTCCCTCAGATACTAGAGAAGCT...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTTTTCAGCTTCTTCAATaGCTTGCCTCACCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLFQLLQ*LASPLS
Trigger: AGAAAGCGGTGAGGCAAGTCATTGAAGAAGCTGAAA...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGCCATCACACTCAAGTTaGACCCTCTGCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLPSHSS*TLCSRF
Trigger: GAATCTGGAGCAGAGGGTTCAACTTGAGTGTGATGG...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACTGGAAAGAGCTGGTTTaGTTCAGCAGTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDWKELV*FSSCPS
Trigger: GGAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCA...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTCTTTGCAGGCAGTGTaGACCATTGTCTTACACCAA +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLSLQAV*TIVLHQ
Trigger: TTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGA...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTGCAGGCAGTGTaGACCATTGTCTTACACCAA +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISSLQAV*TIVLHQ
Trigger: TTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGA...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGATGGTACACATCTTTaGAGGCAGTGTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQDGTHL*RQCAPL
Trigger: CAATGGTGCACACTGCCTGCAAAGATGTGTACCATC...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGGTAAAATTCTTCAGTTaGTGCCACAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKVKFFS*CHRFRK
Trigger: CTTCCTGAACCTGTGGCAGCAACTGAAGAATTTTAC...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATTTTCGTAAGATGGTTTaGAACGGAGTCTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: QDAQACYECWDLNSSLPDFRKMV*NGVFIN
Trigger: ATTTATGAAGACTCCGTTGCAAACCATCTTACGAAA...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGGATATGACCACCGCATaGTCATCAGAGTTGACGATT +
Preference number: 4 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVDMTTA*SSELTI
Trigger: AATCGTCAACTCTGATGAGCATGCGGTGGTCATATC...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAACTATGCGAAAGACTGTaGTTTTGTTGTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQLCERL*FCCFFW
Trigger: CCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAG...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGACCTTTGGAAAGAGCTaGTTTGCTTCAGCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLTFGKS*FASAVV
Trigger: GACAACTGCTGAAGCAAACCAGCTCTTTCCAAAGGT...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTCTCTTCTTCCACCTTTaGAAAGAGCTGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGLFFHL*KELVCF
Trigger: GAAGCAAACCAGCTCTTTCCAAAGGTGGAAGAAGAG...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTCGATGGAGGCCAGCGTaGTCCATTTGCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGARWRPA*SICSCL
Trigger: CAAACAACTGCAAATGGACCACGCTGGCCTCCATCG...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGATGGAGGCCAGCGTaGTCCATTTGCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: VPFKLFNSLENSLHMTHFRWRPA*SICSCL
Trigger: CAAACAACTGCAAATGGACCACGCTGGCCTCCATCG...AAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATCAGGAGACTGAGATGTaGTTTTGGCTGATAGCGACT +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYQETEM*FWLIAT
Trigger: AGTCGCTATCAGCCAAAACCACATCTCAGTCTCCTG...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCCAGGAGACTGAGATGTaGTTTTGGCTGATAGCGACT +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFQETEM*FWLIAT
Trigger: AGTCGCTATCAGCCAAAACCACATCTCAGTCTCCTG...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTCTTTGGTGGTGGCCATaGCTGGACCAGCGACAGAGT +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAILWWWP*LDQRQS
Trigger: ACTCTGTCGCTGGTCCAGCCATGGCCACCACCAAAG...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGCAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMQSVRH*TPALRE
Trigger: CTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTG...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GTCGCTCATTCAGCTTCACCTTCCACTTGGTTGTTGTaGTTGTTTGTACTACGCACTGTTGGGAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: VAHSASPSTWLL*LFVLRTVGSEP
Trigger: TGGTTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAACCAAGTGGAAGGTGAAGCTGAATGAGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GCTGTCGCTCATTCAGCTTCACCTTCCACTTGGTTGTaGTTGTTGTTTGTACTACGCACTGTTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: AVAHSASPSTWL*LLFVLRTVGSE
Trigger: TTCACTCCCAACAGTGCGTAGTACAAACAACAACAACAACCAAGTGGAAGGTGAAGCTGAATGAGCGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp GGTGTGTGTGGGAGGCAGGGCGTGGTTAAAGGTACTTaGTATTTTTCTTCGAAACATCTCAACGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: GVCGRQGVVKGT*YFSSKHLNDFP
Trigger: AGGGAAGTCGTTGAGATGTTTCGAAGAAAAATACAAAGTACCTTTAACCACGCCCTGCCTCCCACACACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACCCAGTTGTGCATCCCTaGGAAATGTTCCACATTGAA +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDPVVHP*EMFHIE
Trigger: TTCAATGTGGAACATTTCTCAGGGATGCACAACTGG...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCCCAGTTGTGCATCCCTaGGAAATGTTCCACATTGAA +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFPVVHP*EMFHIE
Trigger: TTCAATGTGGAACATTTCTCAGGGATGCACAACTGG...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGCCAGTTGTGCATCCCTaGGAAATGTTCCACATTGAA +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRPVVHP*EMFHIE
Trigger: TTCAATGTGGAACATTTCTCAGGGATGCACAACTGG...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGCTTCTCTAGTATCTaGGGGAGTTGGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFSFSSI*GSWVSS
Trigger: TGATGACACCCAACTCCCTCAGATACTAGAGAAGCT...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCAGCTTCTCTAGTATCTaGGGGAGTTGGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPSFSSI*GSWVSS
Trigger: TGATGACACCCAACTCCCTCAGATACTAGAGAAGCT...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAATTCGCTTCATATaGCCCACTTTCGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFRIRFI*PTFGIP
Trigger: GGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCT...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGTGGAAAGAGCTGGTTTaGTTCAGCAGTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLWKELV*FSSCPS
Trigger: GGAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCA...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTCAGAGAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAQRDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTCTCTG...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTTTGCAGTTGTTTGTTaGCCTCACTGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLFAVVC*PHCTSF
Trigger: AAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAA...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTAGGCATTTCCAATCTTaGAGGCGAAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGARHFQS*RRSTLP
Trigger: TGGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCT...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTAGGCATTTCCAATCTTaGAGGCGAAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: VPFKLFNSLENSLHMTHFRHFQS*RRSTLP
Trigger: TGGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCT...AAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTAACCATCAGAGTCTGTaGTATTTAGTGCAATCGGAG +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGNHQSL*YLVQSE
Trigger: CTCCGATTGCACTAAATAGCACAGACTCTGATGGTT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTACAGAACGAAAAGGTTaGTCGACAGAAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCTERKG*STETIR
Trigger: TCTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTGGACAACAGAACGAAAAGGTTaGTCGACAGAAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: ESPLTSEAPSPQSVRHWTTERKG*STETIR
Trigger: TCTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGT...TGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGACAGAACGAAAAGGTTaGTCGACAGAAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISTERKG*STETIR
Trigger: TCTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGT...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp AGTGAGTCTAGATCTGGGTCAATAAACGGTGTTGCCCCGAAAGGATCGATGTTCGTAAAATTCTTCAGTTaGTGCCACAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SESRSGSINGVAPKGSMFVKFFS*CHRFRK
Trigger: CTTCCTGAACCTGTGGCAGCAACTGAAGAATTTTAC...GAACATCGATCCTTTCGGGGCAACACCGTTTATTGACCCAGATCTAGACTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAATTTCGTAAGATGGTTTaGAACGGAGTCTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQFRKMV*NGVFIN
Trigger: ATTTATGAAGACTCCGTTGCAAACCATCTTACGAAA...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATCTCTTCTTCCACCTTTaGAAAGAGCTGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYLFFHL*KELVCF
Trigger: GAAGCAAACCAGCTCTTTCCAAAGGTGGAAGAAGAG...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCAATCAAACACCTGAGCTaGGTTGAGCAACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PFTEQATSYQHCEQPSAAIKHLS*VEQLFK
Trigger: TTTAAACAGTTGCTCAACCCAGCTCAGGTGTTTGAT...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCAAACACCTGAGCTaGGTTGAGCAACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKIKHLS*VEQLFK
Trigger: TTTAAACAGTTGCTCAACCCAGCTCAGGTGTTTGAT...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCTTGTCATCAAAGGATaGCGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKLVIKG*RSKYII
Trigger: GATGATATATTTGCTGCGCCATCCTTTGATGACAAG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGTTTTGTTGTTTCTTTTaGTACAATCCAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLFCCFF*YNPEEA
Trigger: AGCCTCCTCTGGATTGTACCAAAAGAAACAACAAAA...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CAA 72 bp GAGTTAATTAGCAAACTTCTAGTTAGGACTTCAGACTaGACCAGTAGGGCGCTATCTGAGGTGCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ELISKLLVRTSD*TSRALSEVQCS
Trigger: TGAGCACTGCACCTCAGATAGCGCCCTACTGGTCAAGTCTGAAGTCCTAACTAGAAGTTTGCTAATTAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp ACAATGCTTCACAAAACTGTGAATTTGCACTGTTTCTaGGATGAGCTGACCTGGGCCGTGTCATTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TMLHKTVNLHCF*DELTWAVSFCQ
Trigger: TTGGCAGAATGACACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAGCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTACTGCACATCTTTTATaGGCCTTGAACTTACACACT +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGTAHLL*ALNLHT
Trigger: AGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGACTGCACATCTTTTATaGGCCTTGAACTTACACACT +
Preference number: 4 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVTAHLL*ALNLHT
Trigger: AGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGT...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCACTGCACATCTTTTATaGGCCTTGAACTTACACACT +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKITAHLL*ALNLHT
Trigger: AGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGT...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTACACCAAGAGGGGGCTaGCACAGAACGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAITPRGG*HRTKRL
Trigger: CAACCTTTTCGTTCTGTGTCAGCCCCCTCTTGGTGT...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACCAGTTTATCAATCTCTaGCAAAACCCAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDQFINL*QNPAYT
Trigger: AGTGTAGGCTGGGTTTTGTCAGAGATTGATAAACTG...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCTTTCAGCTTCTTCAATaGCTTGCCTCACCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFFQLLQ*LASPLS
Trigger: AGAAAGCGGTGAGGCAAGTCATTGAAGAAGCTGAAA...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCTCTCTGGTTAGCATCTaGGCTCTGTTTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFSLVSI*ALFLCT
Trigger: TGTGCACAAAAACAGAGCTCAGATGCTAACCAGAGA...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp ATTCTATTGAGCGACACTGACACGCCATGGTCTAGAAAAAGGGAAATAATATCTTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: ILLSDTDTPWSRKREIISFVQGV*AGIHCM
Trigger: CATGCAGTGAATGCCTGCTCACACGCCCTGAACAAA...AGATATTATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTCGCTCAATAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTTTTGCAGTTGTTTGTTaGCCTCACTGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCFAVVC*PHCTSF
Trigger: AAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAA...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GAATCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTGGACATTTGCAGTTGTTTGTTaGCCTCACTGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: ESPLTSEAPSPQSVRHWTFAVVC*PHCTSF
Trigger: AAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAA...TGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTTTGCAGTTGTTTGTTaGCCTCACTGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISFAVVC*PHCTSF
Trigger: AAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAA...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGAGGCATTTCCAATCTTaGAGGCGAAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMRHFQS*RRSTLP
Trigger: TGGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCT...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAACCATCAGAGTCTGTaGTATTTAGTGCAATCGGAG +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFNHQSL*YLVQSE
Trigger: CTCCGATTGCACTAAATAGCACAGACTCTGATGGTT...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAACCATCAGAGTCTGTaGTATTTAGTGCAATCGGAG +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRNHQSL*YLVQSE
Trigger: CTCCGATTGCACTAAATAGCACAGACTCTGATGGTT...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGAGCTGGCACTGTTTATaGAAGTTCAGTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLSWHCL*KFSLSI
Trigger: GATTGATAAACTGAACTTGCATAAACAGTGCCAGCT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCGATATGACCACCGCATaGTCATCAGAGTTGACGATT +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFDMTTA*SSELTI
Trigger: AATCGTCAACTCTGATGAGCATGCGGTGGTCATATC...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGCCCAAGACTTCAGGGTaGTTTCAAAGGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMPKTSG*FQRLCL
Trigger: GAGACAGAGCCTTTGAAAGCACCCTGAAGTCTTGGG...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCACAGTGAATCGTGGCTaGGTCACAAATCCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFTVNRG*VTNPSD
Trigger: ATCACTAGGATTTGTGACGCAGCCACGATTCACTGT...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTAGTGCAAAGGGACCCTaGCAACTAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAISAKGP*QLAKPL
Trigger: CAGAGGCTTTGCTAGTTGGCAGGGTCCCTTTGCACT...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCTATGCGAAAGACTGTaGTTTTGTTGTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKLCERL*FCCFFW
Trigger: CCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCATGGAGACTTTACACTaGCCAAGGGGACAGACGGGA +
Preference number: 4 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSMETLH*PRGQTG
Trigger: TCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCAT...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTATCAAACACCTGAGCTaGGTTGAGCAACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGIKHLS*VEQLFK
Trigger: TTTAAACAGTTGCTCAACCCAGCTCAGGTGTTTGAT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTCCAGCATTTTGGTACTaGCTCGTTCCAGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAPAFWY*LVPASL
Trigger: TAGAGAAGCTGGAACGAGCCAGTACCAAAATGCTGG...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGACTGAGATGTGGTTTTaGCTGATAGCGACTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLTEMWF*LIATLS
Trigger: CGAAAGAGTCGCTATCAGCCAAAACCACATCTCAGT...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTCTTGTCATCAAAGGATaGCGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGLVIKG*RSKYII
Trigger: GATGATATATTTGCTGCGCCATCCTTTGATGACAAG...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGCTTGTCATCAAAGGATaGCGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVLVIKG*RSKYII
Trigger: GATGATATATTTGCTGCGCCATCCTTTGATGACAAG...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTGATGGATGTACAGGTTaGTTCGAAGAACTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGADGCTG*FEELAS
Trigger: GGAAGCCAGTTCTTCGAACCAACCTGTACATCCATC...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
3UTR CAA 72 bp TCCTGTAATACAAAGGGAAAGACGTGTTCAAATTCTTaGTTCCTGGGCCTTGGCAAACCGTCTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SCNTKGKTCSNS*FLGLGKPSQVP
Trigger: AGGAACTTGAGACGGTTTGCCAAGGCCCAGGAACAAAGAATTTGAACACGTCTTTCCCTTTGTATTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp CTTGGGGCAGTTTCTCTAAGGGAATATGTGAGGACCTaGACTGACAGCTATATTCATCTCGATAAACTAGCC +
Preference number: 4 (lower is better)
Translates to: LGAVSLREYVRT*TDSYIHLDKLA
Trigger: GGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTCCCTTAGAGAAACTGCCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGCGCAACACTGGCATCTaGGAGGTCAACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMRNTGI*EVNFIK
Trigger: TTTGATGAAGTTGACCTCTCAGATGCCAGTGTTGCG...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCCTGACTTCAGAGAGCTaGTCCAGACCTCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSLTSES*SRPPSL
Trigger: AAGAGATGGAGGTCTGGATCAGCTCTCTGAAGTCAG...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR TCA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTTTATCAATCTCTaGCAAAACCCAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPQFINL*QNPAYT
Trigger: AGTGTAGGCTGGGTTTTGTCAGAGATTGATAAACTG...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR TCA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCCAATTTAATGACCCTTaGTACTGCCATCTGCACACT +
Preference number: 4 (lower is better)
Translates to: TSNQNFHPQQNISRERCFQFNDP*YCHLHT
Trigger: AGTGTGCAGATGGCAGTATCAAGGGTCATTAAATTG...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAGGAGGCAGCAAGTCCTaGTCTCAAACCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRGGSKS*SQTWAD
Trigger: ATCTGCCCAGGTTTGAGAGCAGGACTTGCTGCCTCC...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTACAGTGAATCGTGGCTaGGTCACAAATCCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: VPFKLFNSLENSLHMTHFTVNRG*VTNPSD
Trigger: ATCACTAGGATTTGTGACGCAGCCACGATTCACTGT...AAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCGGTAGCACCCCAAGCTaGCACTGTTTATGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSGSTPS*HCLCKF
Trigger: GAACTTGCATAAACAGTGCCAGCTTGGGGTGCTACC...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CCA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTTTTTGTTGTTTCTTTTaGTACAATCCAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGFCCFF*YNPEEA
Trigger: AGCCTCCTCTGGATTGTACCAAAAGAAACAACAAAA...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGTTCCTTTTTAAACTTTaGCACTATGCGAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLFLFKL*HYAKDC
Trigger: ACAGTCTTTCGCATAGTGCCAAAGTTTAAAAAGGAA...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp TGCACACTGTCAAACACTGCGACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCAGCAAATATATCATCC +
Preference number: 4 (lower is better)
Translates to: CTLSNTATTSRI*SSKDGAANISS
Trigger: GGATGATATATTTGCTGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGTCGCAGTGTTTGACAGTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
3UTR CAA 72 bp TTAAACTTTGGCACTATGCGAAAGACTGTGCTTTTGTaGTTTCTTTTGGTACAATCCAGAGGAGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LNFGTMRKTVLL*FLLVQSRGGSS
Trigger: CGAGGAGCCTCCTCTGGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR GCA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTACAGAACGAAAAGGTTaGTCGACAGAAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: IPQIKTFTHSKISVGRGATERKG*STETIR
Trigger: TCTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGT...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACAGCTGGCACTGTTTATaGAAGTTCAGTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDSWHCL*KFSLSI
Trigger: GATTGATAAACTGAACTTGCATAAACAGTGCCAGCT...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAGCTGGCACTGTTTATaGAAGTTCAGTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRSWHCL*KFSLSI
Trigger: GATTGATAAACTGAACTTGCATAAACAGTGCCAGCT...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR GCA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATCTATGCGAAAGACTGTaGTTTTGTTGTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYLCERL*FCCFFW
Trigger: CCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAG...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATTCTATTGAGCGACACTGACACGCCATGGTCTAGAAAAAGGGAAATAATATCTTTGCTTCCGCAACACTaGCATCTGAGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: ILLSDTDTPWSRKREIISLLPQH*HLRGQL
Trigger: AAGTTGACCTCTCAGATGCCAGTGTTGCGGAAGCAA...AGATATTATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTCGCTCAATAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTCCAGCATTTTGGTACTaGCTCGTTCCAGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIPAFWY*LVPASL
Trigger: TAGAGAAGCTGGAACGAGCCAGTACCAAAATGCTGG...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp ATTCTATTGAGCGACACTGACACGCCATGGTCTAGAAAAAGGGAAATAATATCTCAAAGGCTCTGTCTCTaGTTAGCATCTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILLSDTDTPWSRKREIISQRLCL*LASELC
Trigger: ACAGAGCTCAGATGCTAACCAGAGACAGAGCCTTTG...AGATATTATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTCGCTCAATAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCTTTTGTTGTTTCTTTTaGTACAATCCAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFFCCFF*YNPEEA
Trigger: AGCCTCCTCTGGATTGTACCAAAAGAAACAACAAAA...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGTTCCTTTTTAAACTTTaGCACTATGCGAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: FHPQQNISRERCFRGAYLFLFKL*HYAKDC
Trigger: ACAGTCTTTCGCATAGTGCCAAAGTTTAAAAAGGAA...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CCA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTTCCTTTTTAAACTTTaGCACTATGCGAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LENSLHMTHFRNPQVLKIFLFKL*HYAKDC
Trigger: ACAGTCTTTCGCATAGTGCCAAAGTTTAAAAAGGAA...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
3UTR CAA 72 bp CTATCAAAACCGCCTTCACTGGGTCAGCAGCCCTGCTaGCTTCTCTTATATACACAACTTTCAAATATTACA +
Preference number: 4 (lower is better)
Translates to: LSKPPSLGQQPC*LLLYTQLSNIT
Trigger: TGTAATATTTGAAAGTTGTGTATATAAGAGAAGCAAGCAGGGCTGCTGACCCAGTGAAGGCGGTTTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp CAGTTGCTTTTGCCTGATAATGTTTGCACAGAAGGCTaGTGTCCTTGCAAGCACAAGACTTTGAAGGTATTT +
Preference number: 4 (lower is better)
Translates to: QLLLPDNVCTEG*CPCKHKTLKVF
Trigger: AAATACCTTCAAAGTCTTGTGCTTGCAAGGACACAAGCCTTCTGTGCAAACATTATCAGGCAAAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp AATAATGAAAGTTTTGCAATGGAGACAGGTTATCAGTaGCCTGGAGGTGAGAAGAAATTGACGGCACAATGG +
Preference number: 4 (lower is better)
Translates to: NNESFAMETGYQ*PGGEKKLTAQW
Trigger: CCATTGTGCCGTCAATTTCTTCTCACCTCCAGGCAACTGATAACCTGTCTCCATTGCAAAACTTTCATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTCCAGTTGTGCATCCCTaGGAAATGTTCCACATTGAA +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIPVVHP*EMFHIE
Trigger: TTCAATGTGGAACATTTCTCAGGGATGCACAACTGG...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGGTAAAATTCTTCAGTTaGTGCCACAGGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMVKFFS*CHRFRK
Trigger: CTTCCTGAACCTGTGGCAGCAACTGAAGAATTTTAC...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTTTCGTAAGATGGTTTaGAACGGAGTCTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQFRKMV*NGVFIN
Trigger: ATTTATGAAGACTCCGTTGCAAACCATCTTACGAAA...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGAGGTAGCACCCCAAGCTaGCACTGTTTATGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRGSTPS*HCLCKF
Trigger: GAACTTGCATAAACAGTGCCAGCTTGGGGTGCTACC...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR TCA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTCAATTTAATGACCCTTaGTACTGCCATCTGCACACT +
Preference number: 4 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAIQFNDP*YCHLHT
Trigger: AGTGTGCAGATGGCAGTATCAAGGGTCATTAAATTG...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp ACACCCAAGAATTCTCCTTATGTGCACACCTGTAGTTaGGAACAGGCAAAGAATTTGGTTTGCATAAGATGT +
Preference number: 4 (lower is better)
Translates to: TPKNSPYVHTCS*EQAKNLVCIRC
Trigger: ACATCTTATGCAAACCAAATTCTTTGCCTGTTCCAAACTACAGGTGTGCACATAAGGAGAATTCTTGGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR GCA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGATCTTTGCAGGCAGTGTaGACCATTGTCTTACACCAA +
Preference number: 4 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRSLQAV*TIVLHQ
Trigger: TTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGA...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp ACTGATACATACACTGATTTGGATGTATCTGGGACATaGTGTGTGTGTGGACCATATAAAGTCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: TDTYTDLDVSGT*CVCGPYKVMNC
Trigger: ACAGTTCATGACTTTATATGGTCCACACACACACAATGTCCCAGATACATCCAAATCAGTGTATGTATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp CATGACAAGCATGAAGTATGTCCACTGGGTACTTTATaGACACAAGAAAATGAAAAATGCCTTTATCTCAGT +
Preference number: 4 (lower is better)
Translates to: HDKHEVCPLGTL*TQENEKCLYLS
Trigger: ACTGAGATAAAGGCATTTTTCATTTTCTTGTGTCAATAAAGTACCCAGTGGACATACTTCATGCTTGTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp TGTATAATTCCACTAATACTTGAAATAATGAAAGTTTaGCAATGGAGACAGGTTATCAGTTGCCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CIIPLILEIMKV*QWRQVISCLEV
Trigger: CACCTCCAGGCAACTGATAACCTGTCTCCATTGCAAAACTTTCATTATTTCAAGTATTAGTGGAATTATACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp CTTTTGTTTGTAAATGCAATGTCAAGGGTTACCAGATaGGATGTCTCTTTTTCATGGAATGGCTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLFVNAMSRVTR*DVSFSWNGFLY
Trigger: ATAAAGAAAGCCATTCCATGAAAAAGAGACATCCAATCTGGTAACCCTTGACATTGCATTTACAAACAAAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
3UTR CAA 72 bp AGGGCTTATTTCTATTGGGGGAAACCAAATTGTGTTTaGAACATTAATAACTCCACTGCATGGAATATTATC +
Preference number: 4 (lower is better)
Translates to: RAYFYWGKPNCV*NINNSTAWNII
Trigger: GATAATATTCCATGCAGTGGAGTTATTAATGTTCAAAACACAATTTGGTTTCCCCCAATAGAAATAAGCCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS GCA 90 bp CCCCAGCGACCGCTCCTCCCGCGACGCCCTGAGGGTGGTGCTGGCTaGCGGCCCCGGCCATCCTCTCTGATTCCGGTTCCTCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PQRPLLPRRPEGGAG*RPRPSSLIPVPPRP
Trigger: CGGCCTGGGAGGAACCGGAATCAGAGAGGATGGCCGGGGCCGGCAGCCAGCACCACCCTCAGGGCGTCGCGGGAGGAGCGGTCGCTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS TCA 90 bp GACGCCCTGAGGGTGGTGCTGGCTGCCGGCCCCGGCCATCCTCTCTaGTTCCGGTTCCTCCCAGGCCGGGCTCTGGGCTCCAAGCACGGG +
Preference number: 5 (lower is better)
Translates to: DALRVVLAAGPGHPL*FRFLPGRALGSKHG
Trigger: CCCGTGCTTGGAGCCCAGAGCCCGGCCTGGGAGGAACCGGAATCAGAGAGGATGGCCGGGGCCGGCAGCCAGCACCACCCTCAGGGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS CCA 90 bp GCTCCGCTTCACTGTCGGACGAATCCTCTCCCGGTCCTGCAGCAGTaGGGGAAACCGCGCTGGCCCCAGCGACCGCTCCTCCCGCGACGC +
Preference number: 5 (lower is better)
Translates to: APLHCRTNPLPVLQQ*GKPRWPQRPLLPRR
Trigger: GCGTCGCGGGAGGAGCGGTCGCTGGGGCCAGCGCGGTTTCCCCCACTGCTGCAGGACCGGGAGAGGATTCGTCCGACAGTGAAGCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 90 bp CGTAAGGCTCTCCGGGAAGCGTGGGTTGGCTTTGTTCAGGGCGTGTaGGCAGGCATTCACTGCATGTGCCAGCTCCTGCTCCAGGAGACA +
Preference number: 5 (lower is better)
Translates to: RKALREAWVGFVQGV*AGIHCMCQLLLQET
Trigger: TGTCTCCTGGAGCAGGAGCTGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGAGCCTTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATGGGGATGGCCACAGCTaGCCTGGGCATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: QDAQACYECWDLNSSLPDGDGHS*PGHQET
Trigger: AGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCC...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGGGGATGGCCACAGCTaGCCTGGGCATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQGDGHS*PGHQET
Trigger: AGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCC...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 90 bp ACTGCACACTTGGCACTCACAGGCAAGTTGCCTTCGAGCCACTGGTaGGGCATGGCAACACCATCCTCGTCCTCTATGATGTCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: TAHLALTGKLPSSHW*GMATPSSSSMMSFP
Trigger: CGGGAAGGACATCATAGAGGACGAGGATGGTGTTGCCATGCCTCACCAGTGGCTCGAAGGCAACTTGCCTGTGAGTGCCAAGTGTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp ATCCTAGTGATGAGTTCCTCCGCAGCCTGGGAGCAGAGCCGCATCTGTGACACTGCCAGCGTGGTCCATTaGCAGTTGTTTGTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ILVMSSSAAWEQSRICDTASVVH*QLFVAL
Trigger: GAGGGCAACAAACAACTGCAAATGGACCACGCTGGC...AGTGTCACAGATGCGGCTCTGCTCCCAGGCTGCGGAGGAACTCATCACTAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGGGGATGGCCACAGCTaGCCTGGGCATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLGDGHS*PGHQET
Trigger: AGTCTCCTGATGCCCAGGCAAGCTGTGGCCATCCCC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLKRGLA*FRACEQ
Trigger: CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTT...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS CCA 90 bp TCTCCGTTAACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAGGAGATTCCAAGTGCAAAGGGACCC +
Preference number: 5 (lower is better)
Translates to: SPLTSEAPSPQSVRH*TPALREEIPSAKGP
Trigger: GGGTCCCTTTGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGTTAACGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAAAGGCATTTCCAATCTaGCAGGCGAAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQKAFPI*QAKHTA
Trigger: GGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCTT...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAATGTGCCTTCTCCACTTaGGCAACGAAGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQCAFST*ATKSFT
Trigger: CGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCACA...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp TCTTGTACGATCTCTGTAGTAGCTCCCGGGTCCCAAGGACTCCGTACCACATCATGTGCCTTCTCCACTTaGGCAACGAAGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: SCTISVVAPGSQGLRTTSCAFST*ATKSFT
Trigger: CGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCACA...TGATGTGGTACGGAGTCCTTGGGACCCGGGAGCTACTACAGAGATCGTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGACAGGGAGGTTTTCTTaGGTGGTGGCCATGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLTGRFS*VVAMAG
Trigger: TCCAGCCATGGCCACCACCAAAGAAAACCTCCCTGT...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATTCCATTTGCAGTTGTTaGTTGCCCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: QDAQACYECWDLNSSLPDSICSC*LPSLHI
Trigger: GATGTGCAGTGAGGGCAACAAACAACTGCAAATGGA...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AGGACTTCTCTTCCCAGAAATAGCACCAGTGTGACCACCCCTCAGACCAAGTTGTCTCCACTCTTAGAGTaGACGAACACCAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RTSLPRNSTSVTTPQTKLSPLLE*TNTKRG
Trigger: CCCCCTCTTGGTGTTCGTCAACTCTAAGAGTGGAGA...CAACTTGGTCTGAGGGGTGGTCACACTGGTGCTATTTCTGGGAAGAGAAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp CGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTCCACTCTTAGAGTaGACGAACACCAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RNPQVLKISSFQMQKFSPSPLLE*TNTKRG
Trigger: CCCCCTCTTGGTGTTCGTCAACTCTAAGAGTGGAGA...GGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp TGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGAGTGGTAGCGACAGAGTCAGTTaGGGGATGGCCACAGCTTGC +
Preference number: 5 (lower is better)
Translates to: CSKSQQQAAASKDSVLSGSDRVS*GMATAC
Trigger: GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCT...ACCACTCAATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTAGCGACAGAGTCAGTTaGGGGATGGCCACAGCTTGC +
Preference number: 5 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCSDRVS*GMATAC
Trigger: GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATCTCTGCTCCAGATTCTaGTACGATCTCTGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: QDAQACYECWDLNSSLPDLCSRF*YDLCSS
Trigger: GCTACTACAGAGATCGTACAAGAATCTGGAGCAGAG...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGAGTCACACTTCTGCTaGTCTTCCCAAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQESHFC*SSQDFR
Trigger: CCTGAAGTCTTGGGAAGACAAGCAGAAGTGTGACTC...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTCACAAAACTGTGAATTTGCACTGTTTCTTGGATGAGCTGACCTGGGCCGTGAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LHKTVNLHCFLDELTWAVKRGLA*FRACEQ
Trigger: CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTT...CACGGCCCAGGTCAGCTCATCCAAGAAACAGTGCAAATTCACAGTTTTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTCCGGGAAGCGTGGGTaGGCTTTGTTCAGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYSGKRG*ALFRAC
Trigger: ACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGA...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGTCCGGGAAGCGTGGGTaGGCTTTGTTCAGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRSGKRG*ALFRAC
Trigger: ACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGA...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS TCA 90 bp TTCCACATTGAACTGGGCCACCTCATAGGGTTCTCTGCTCTGCACTaGCTTCAGAGAGCTGATCCAGACCTCCATCTCTTTCCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: FHIELGHLIGFSALH*LQRADPDLHLFPVL
Trigger: GAGAACAGGAAAGAGATGGAGGTCTGGATCAGCTCTCTGAAGTCAGTGCAGAGCAGAGAACCCTATGAGGTGGCCCAGTTCAATGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 90 bp GGAGGTATGATGGAGACTTTACACTGGCCAAGGGGACAGACGGGATaGTACACATCTTTGCAGGCAGTGTGCACCATTGTCTTACACCAA +
Preference number: 5 (lower is better)
Translates to: GGMMETLHWPRGQTG*YTSLQAVCTIVLHQ
Trigger: TTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCATCATACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp GGGGAGCTCTGGGTTGATCTGGTTTCACAGGAAAAGTTGGCAAGGTACCCACCATTGGAAAGAGCTGGTTaGCTTCAGCAGTTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GELWVDLVSQEKLARYPPLERAG*LQQLSF
Trigger: GAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCAA...TGGTGGGTACCTTGCCAACTTTTCCTGTGAAACCAGATCAACCCAGAGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCAAGGCATTTCCAATCTaGCAGGCGAAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLKAFPI*QAKHTA
Trigger: GGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCTT...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp TCTTGTACGATCTCTGTAGTAGCTCCCGGGTCCCAAGGACTCCGTACCACATCAAGGCAGTGTGCACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: SCTISVVAPGSQGLRTTSRQCAP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTGCACACTGCCT...TGATGTGGTACGGAGTCCTTGGGACCCGGGAGCTACTACAGAGATCGTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCATCTCCACTCTTAGAGTaGACGAACACCAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PFTEQATSYQHCEQPSAASPLLE*TNTKRG
Trigger: CCCCCTCTTGGTGTTCGTCAACTCTAAGAGTGGAGA...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGTCTCCACTCTTAGAGTaGACGAACACCAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKSPLLE*TNTKRG
Trigger: CCCCCTCTTGGTGTTCGTCAACTCTAAGAGTGGAGA...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ATCCTAGTGATGAGTTCCTCCGCAGCCTGGGAGCAGAGCCGCATCTGTGACACTTGTAAAATTCTTCAGTaGCTGCCACAGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: ILVMSSSAAWEQSRICDTCKILQ*LPQVQE
Trigger: TTCCTGAACCTGTGGCAGCAACTGAAGAATTTTACA...AGTGTCACAGATGCGGCTCTGCTCCCAGGCTGCGGAGGAACTCATCACTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCGACAGAGTCAGTTaGGGGATGGCCACAGCTTGC +
Preference number: 5 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFSDRVS*GMATAC
Trigger: GCAAGCTGTGGCCATCCCCAAACTGACTCTGTCGCT...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CAGGATGCTCAGGCCTGCTATGAGTGCTGGGACTTGAACTCCAGTCTCCCTGATCAGATGATTCTAGTGTaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: QDAQACYECWDLNSSLPDQMILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAACACTAGAATCATCTG...ATCAGGGAGACTGGAGTTCAAGTCCCAGCACTCATAGCAGGCCTGAGCATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GGAACCTCCTGTGGGCCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAATTTTTGTGCACAATCTaGATGATCCCTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GTSCGPRSKDPHWMMGKQFLCTI*MIPGGW
Trigger: CCAGCCTCCAGGGATCATCAAGATTGTGCACAAAAA...TTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGGCCCACAGGAGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAGCCCCTCTGACGGGATGGATGTACAGGTaGGTTCGAAGAACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLTGWMYR*VRRTGF
Trigger: GAAGCCAGTTCTTCGAACCAACCTGTACATCCATCC...CGTCAGAGGGGCTGAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFKRGLA*FRACEQ
Trigger: CTGCTCACACGCCCTGAACAAAGCCAACCCACGCTT...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS TCA 90 bp GTGGTCCATTTGCAGTTGTTTGTTGCCCTCACTGCACATCTTTTATaGGCCTTGAACTTACACACTTCACAGGACAGGCCGTGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: VVHLQLFVALTAHLL*ALNLHTSQDRPWEV
Trigger: GACCTCCCACGGCCTGTCCTGTGAAGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAATGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 90 bp TCTGTGCTATTTAGTGCAATCGGAGGTATGATGGAGACTTTACACTaGCCAAGGGGACAGACGGGATGGTACACATCTTTGCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVLFSAIGGMMETLH*PRGQTGWYTSLQAV
Trigger: CACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCATCATACCTCCGATTGCACTAAATAGCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGCCAGCGTGGTCCATTaGCAGTTGTTTGTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDASVVH*QLFVAL
Trigger: GAGGGCAACAAACAACTGCAAATGGACCACGCTGGC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGCCAGCGTGGTCCATTaGCAGTTGTTTGTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQASVVH*QLFVAL
Trigger: GAGGGCAACAAACAACTGCAAATGGACCACGCTGGC...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp AGTGAGTCTAGATCTGGGTCAATAAACGGTGTTGCCCCGAAAGGATCGATGTTCAAGGCATTTCCAATCTaGCAGGCGAAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: SESRSGSINGVAPKGSMFKAFPI*QAKHTA
Trigger: GGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCTT...GAACATCGATCCTTTCGGGGCAACACCGTTTATTGACCCAGATCTAGACTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATACAGGGAGGTTTTCTTaGGTGGTGGCCATGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYTGRFS*VVAMAG
Trigger: TCCAGCCATGGCCACCACCAAAGAAAACCTCCCTGT...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCGGATGGATGTACAGGTaGGTTCGAAGAACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLGWMYR*VRRTGF
Trigger: GAAGCCAGTTCTTCGAACCAACCTGTACATCCATCC...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 90 bp GACAGAAACCATCAGAGTCTGTGCTATTTAGTGCAATCGGAGGTATaGTGGAGACTTTACACTGGCCAAGGGGACAGACGGGATGGTACA +
Preference number: 5 (lower is better)
Translates to: DRNHQSLCYLVQSEV*WRLYTGQGDRRDGT
Trigger: TGTACCATCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCATCATACCTCCGATTGCACTAAATAGCACAGACTCTGATGGTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 90 bp GATGGAGGCCAGCGTGGTCCATTTGCAGTTGTTTGTTGCCCTCACTaGACATCTTTTATGAGCCTTGAACTTACACACTTCACAGGACAG +
Preference number: 5 (lower is better)
Translates to: DGGQRGPFAVVCCPH*TSFMSLELTHFTGQ
Trigger: CTGTCCTGTGAAGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAATGGACCACGCTGGCCTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 90 bp AGACTTTACACTGGCCAAGGGGACAGACGGGATGGTACACATCTTTaGAGGCAGTGTGCACCATTGTCTTACACCAAAGGCATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: RLYTGQGDRRDGTHL*RQCAPLSYTKGISN
Trigger: ATTGGAAATGCCTTTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGAGGCAGTGTGCACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLRQCAP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTGCACACTGCCT...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTCTGATCCATCCTCTCCTGTGGGTCTGCAATGTCACCTCATGTATTCTGCTGAGGCAGTGTGCACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: LLIHPLLWVCNVTSCILLRQCAP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTGCACACTGCCT...CAGCAGAATACATGAGGTGACATTGCAGACCCACAGGAGAGGATGGATCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GGATGTACAGGTTGGTTCGAAGAACTGGCTTCCCAGAGTCACACTTCTGCTTGTGTTTCACAGAGTATCTaGGCAGACGATATGACCACC +
Preference number: 5 (lower is better)
Translates to: GCTGWFEELASQSHTSACVSQSI*ADDMTT
Trigger: GGTGGTCATATCGTCTGCCAAGATACTCTGTGAAAC...ACAAGCAGAAGTGTGACTCTGGGAAGCCAGTTCTTCGAACCAACCTGTACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATTGTGCCTTCTCCACTTaGGCAACGAAGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYCAFST*ATKSFT
Trigger: CGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCACA...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTGTGCCTTCTCCACTTaGGCAACGAAGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQCAFST*ATKSFT
Trigger: CGTGAAGGACTTCGTTGCCAAAGTGGAGAAGGCACA...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCACAGGGAGGTTTTCTTaGGTGGTGGCCATGGCTGGA +
Preference number: 5 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPTGRFS*VVAMAG
Trigger: TCCAGCCATGGCCACCACCAAAGAAAACCTCCCTGT...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp AATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTGAGTCACACTTCTGCTaGTCTTCCCAAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: NSLENSLHMTHFRNPQVLESHFC*SSQDFR
Trigger: CCTGAAGTCTTGGGAAGACAAGCAGAAGTGTGACTC...AAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGGGATGGATGTACAGGTaGGTTCGAAGAACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FHPQQNISRERCFRGAYLGWMYR*VRRTGF
Trigger: GAAGCCAGTTCTTCGAACCAACCTGTACATCCATCC...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS GCA 90 bp TCATTGCCGGTACCCAAGGGTAGCACCCCAAGCTGGCACTGTTTATaGAAGTTCAGTTTATCAATCTCTGACAAAACCCAGCCTACACTT +
Preference number: 5 (lower is better)
Translates to: SLPVPKGSTPSWHCL*KFSLSISDKTQPTL
Trigger: AAGTGTAGGCTGGGTTTTGTCAGAGATTGATAAACTGAACTTGCATAAACAGTGCCAGCTTGGGGTGCTACCCTTGGGTACCGGCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 90 bp CTTGTAGCAACTGCTCAAGCTTCTCGTTTAGGACTGAGCATTTACTaGCCACGGCTTCGGCTACTACTGTATTTTCCAGTGTTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LVATAQASRLGLSIY*PRLRLLLYFPVFCP
Trigger: AGGACAGAACACTGGAAAATACAGTAGTAGCCGAAGCCGTGGCCAGTAAATGCTCAGTCCTAAACGAGAAGCTTGAGCAGTTGCTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp CTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCCATTTGCAGTTGTTaGTTGCCCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: LENSLHMTHFRNPQVLKISICSC*LPSLHI
Trigger: GATGTGCAGTGAGGGCAACAAACAACTGCAAATGGA...GATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTGCCAGCGTGGTCCATTaGCAGTTGTTTGTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAASVVH*QLFVAL
Trigger: GAGGGCAACAAACAACTGCAAATGGACCACGCTGGC...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCAAGGCATTTCCAATCTaGCAGGCGAAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPKAFPI*QAKHTA
Trigger: GGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCTT...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGCACAGAACGAAAAGGTaGCTCGACAGAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: FHPQQNISRERCFRGAYLHRTKR*LDRNHQ
Trigger: CTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGTG...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGCTCTGCTCCAGATTCTaGTACGATCTCTGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISLCSRF*YDLCSS
Trigger: GCTACTACAGAGATCGTACAAGAATCTGGAGCAGAG...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS TCA 90 bp AGGACTTGGAGTCTTTCGCATAATAAAGTGTGCGGCCGCGAAGCTTaGAGTATCTCTTCTTCCACCTTTGGAAAGAGCTGGTTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: RTWSLSHNKVCGREA*SISSSTFGKSWFAS
Trigger: TGAAGCAAACCAGCTCTTTCCAAAGGTGGAAGAAGAGATACTTCAAGCTTCGCGGCCGCACACTTTATTATGCGAAAGACTCCAAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 90 bp TTGCTGCCACAGGTTCAGGAAGTAGAGACGACTTTGCTGGCAATTTaGGCTCATAGGTCATTATACTCCACCTGTCCAGCATTTTGGTAC +
Preference number: 5 (lower is better)
Translates to: LLPQVQEVETTLLAI*AHRSLYSTCPAFWY
Trigger: GTACCAAAATGCTGGACAGGTGGAGTATAATGACCTATGAGCTCAAATTGCCAGCAAAGTCGTCTCTACTTCCTGAACCTGTGGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 90 bp TTCACGGTTTCACAGAGTATCTTGGCAGACGATATGACCACCGCATaGTCATCAGAGTTGACGATTTTCGTAAGATGGTTTGCAACGGAG +
Preference number: 5 (lower is better)
Translates to: FTVSQSILADDMTTA*SSELTIFVRWFATE
Trigger: CTCCGTTGCAAACCATCTTACGAAAATCGTCAACTCTGATGAGCATGCGGTGGTCATATCGTCTGCCAAGATACTCTGTGAAACCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS-3UTR CAA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGCACAGAACGAAAAGGTaGCTCGACAGAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRHRTKR*LDRNHQ
Trigger: CTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGTG...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp GCGAAGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCTGTAAAATTCTTCAGTaGCTGCCACAGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: AKFQLHTVNTVAGTHRNLCKILQ*LPQVQE
Trigger: TTCCTGAACCTGTGGCAGCAACTGAAGAATTTTACA...GAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATGTTTCACAGAGTATCTaGGCAGACGATATGACCACC +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYVSQSI*ADDMTT
Trigger: GGTGGTCATATCGTCTGCCAAGATACTCTGTGAAAC...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CACTTTCGGAATCCCCAGGTCCTTAAGATCTCGTCTTTCCAGATGCAAAAGTTCGTTTCACAGAGTATCTaGGCAGACGATATGACCACC +
Preference number: 5 (lower is better)
Translates to: HFRNPQVLKISSFQMQKFVSQSI*ADDMTT
Trigger: GGTGGTCATATCGTCTGCCAAGATACTCTGTGAAAC...GAACTTTTGCATCTGGAAAGACGAGATCTTAAGGACCTGGGGATTCCGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGCAGATGATTCTAGTGTaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISQMILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAACACTAGAATCATCTG...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGGCCAGCAACATTTTGTaGATGATAGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISASNIL*MIELPA
Trigger: TGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGC...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACCTCTGCTCCAGATTCTaGTACGATCTCTGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDLCSRF*YDLCSS
Trigger: GCTACTACAGAGATCGTACAAGAATCTGGAGCAGAG...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGTTTTTGTGCACAATCTaGATGATCCCTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQFLCTI*MIPGGW
Trigger: CCAGCCTCCAGGGATCATCAAGATTGTGCACAAAAA...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCGAGTCACACTTCTGCTaGTCTTCCCAAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: TSNQNFHPQQNISRERCFESHFC*SSQDFR
Trigger: CCTGAAGTCTTGGGAAGACAAGCAGAAGTGTGACTC...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCTTTTGTTGTTTCTTTaGGTACAATCCAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKLLLFL*VQSRGG
Trigger: GCCTCCTCTGGATTGTACCAAAAGAAACAACAAAAG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGTTGTACTCTCCCAAATaGAGCAGATCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: PFKLFNSLENSLHMTHFRLYSPK*SRSSQA
Trigger: TGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAA...CCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCTCCATTTGCAGTTGTTaGTTGCCCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: TSNQNFHPQQNISRERCFSICSC*LPSLHI
Trigger: GATGTGCAGTGAGGGCAACAAACAACTGCAAATGGA...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCTCCATTTGCAGTTGTTaGTTGCCCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPSICSC*LPSLHI
Trigger: GATGTGCAGTGAGGGCAACAAACAACTGCAAATGGA...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCCACAGAACGAAAAGGTaGCTCGACAGAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: TSNQNFHPQQNISRERCFHRTKR*LDRNHQ
Trigger: CTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGTG...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATCAGATGATTCTAGTGTaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYQMILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAACACTAGAATCATCTG...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACGCCAGCAACATTTTGTaGATGATAGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDASNIL*MIELPA
Trigger: TGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGC...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGATCTCGACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: ENSLHMTHFRNPQVLKISTTSRI*SSKDGA
Trigger: TGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGT...CGAGATCTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCAGAGGTGCTTATCTGCTTTTGTTGTTTCTTTaGGTACAATCCAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: FHPQQNISRERCFRGAYLLLLFL*VQSRGG
Trigger: GCCTCCTCTGGATTGTACCAAAAGAAACAACAAAAG...CAGATAAGCACCTCTGAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTTGGAAAGAGCTGGTTaGCTTCAGCAGTTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: IPQIKTFTHSKISVGRGALERAG*LQQLSF
Trigger: GAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCAA...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGTATATTTGCAGTTGTTTGTaGCCCTCACTGCACATCTTT +
Preference number: 5 (lower is better)
Translates to: LICAVNHNNRQRLPRTLYICSCL*PSLHIF
Trigger: AAAGATGTGCAGTGAGGGCAACAAACAACTGCAAAT...ATACAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTAGGCAGTGTGCACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: VPFKLFNSLENSLHMTHFRQCAP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTGCACACTGCCT...AAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTGTTTCACAGAGTATCTaGGCAGACGATATGACCACC +
Preference number: 5 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAVSQSI*ADDMTT
Trigger: GGTGGTCATATCGTCTGCCAAGATACTCTGTGAAAC...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDTTSRI*SSKDGA
Trigger: TGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGT...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp CCTTTCACAGAACAAGCTACCAGCTATCAGCACTGTGAGCAACCTTCAGCTGCAAAGACTGTGCTTTTGTaGTTTCTTTTGGTACAATCC +
Preference number: 5 (lower is better)
Translates to: PFTEQATSYQHCEQPSAAKTVLL*FLLVQS
Trigger: GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTT...TGCAGCTGAAGGTTGCTCACAGTGCTGATAGCTGGTAGCTTGTTCTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GTGCTTATCTGTGCAGTAAATCACAACAACAGGCAGCGGCTTCCAAGGACTCTGCGAAAGACTGTGCTTTaGTTGTTTCTTTTGGTACAA +
Preference number: 5 (lower is better)
Translates to: VLICAVNHNNRQRLPRTLRKTVL*LFLLVQ
Trigger: TTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCG...CAGAGTCCTTGGAAGCCGCTGCCTGTTGTTGTGATTTACTGCACAGATAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGGTCCTTAAGCGAAAGACTGTGCTTTaGTTGTTTCTTTTGGTACAA +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRNPQVLKRKTVL*LFLLVQ
Trigger: TTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCG...CTTAAGGACCTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp TTATTCTGTCCTTTAAAGGAGCCTTCCAACCTCCTGAACCAAGATCCACTACTGGGTTTGCTTCAGCAGTaGTCCTTCCTTAATACTAGT +
Preference number: 5 (lower is better)
Translates to: LFCPLKEPSNLLNQDPLLGLLQQ*SFLNTS
Trigger: ACTAGTATTAAGGAAGGACAACTGCTGAAGCAAACC...CAGTAGTGGATCTTGGTTCAGGAGGTTGGAAGGCTCCTTTAAAGGACAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp ACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTTCTGTAAAATTCTTCAGTaGCTGCCACAGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: TSNQNFHPQQNISRERCFCKILQ*LPQVQE
Trigger: TTCCTGAACCTGTGGCAGCAACTGAAGAATTTTACA...GAAGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GCCAGAACTGTGGCTGACAGGAAAATATATACACGAGTTGCGGAAATAAAAATGTTTTTGTGCACAATCTaGATGATCCCTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: ARTVADRKIYTRVAEIKMFLCTI*MIPGGW
Trigger: CCAGCCTCCAGGGATCATCAAGATTGTGCACAAAAA...CATTTTTATTTCCGCAACTCGTGTATATATTTTCCTGTCAGCCACAGTTCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AGTTCCAGCTGCATACTGTTAACACAGTTGCAGGCACACATAGGAACCTCCTGTAAGACTGTGCTTTTGTaGTTTCTTTTGGTACAATCC +
Preference number: 5 (lower is better)
Translates to: SSSCILLTQLQAHIGTSCKTVLL*FLLVQS
Trigger: GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTT...ACAGGAGGTTCCTATGTGTGCCTGCAACTGTGTTAACAGTATGCAGCTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCGGATGAAGATTTCTTaGTACTCTCCCAAATTGAGC +
Preference number: 5 (lower is better)
Translates to: KLFNSLENSLHMTHFRNPRMKIS*YSPKLS
Trigger: GCTCAATTTGGGAGAGTACAAAGAAATCTTCATCCG...GGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp ATACCTCAAATCAAAACTTTCACCCACAGCAAAATATCAGTCGGGAGAGGTGCTGGTTTGCTTCAGCAGTaGTCCTTCCTTAATACTAGT +
Preference number: 5 (lower is better)
Translates to: IPQIKTFTHSKISVGRGAGLLQQ*SFLNTS
Trigger: ACTAGTATTAAGGAAGGACAACTGCTGAAGCAAACC...AGCACCTCTCCCGACTGATATTTTGCTGTGGGTGAAAGTTTTGATTTGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp AACTTTGGCACTATGCGAAAGACTGTGCTTTTGTTGTTTCTTTTGGTACAATCCCACAGAACGAAAAGGTaGCTCGACAGAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: NFGTMRKTVLLLFLLVQSHRTKR*LDRNHQ
Trigger: CTGATGGTTTCTGTCGAGCAACCTTTTCGTTCTGTG...GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCGCATAGTGCCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227537.2
CDS-3UTR CAA 90 bp GTTCCGTTCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTTGTAAAATTCTTCAGTaGCTGCCACAGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: VPFKLFNSLENSLHMTHFCKILQ*LPQVQE
Trigger: TTCCTGAACCTGTGGCAGCAACTGAAGAATTTTACA...AAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGAACGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227537.2
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CTCTTTAATTCCCTGGAGAATTCGCTTCATATGACCCACTTTCGGAATCCCCAGAAGACTGTGCTTTTGTaGTTTCTTTTGGTACAATCC +
Preference number: 5 (lower is better)
Translates to: LFNSLENSLHMTHFRNPQKTVLL*FLLVQS
Trigger: GGATTGTACCAAAAGAAACAACAAAAGCACAGTCTT...CTGGGGATTCCGAAAGTGGGTCATATGAAGCGAATTCTCCAGGGAATTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227767.2
CDS-3UTR CAA 90 bp CCCAGATCTAAAGACCCTCACTGGATGATGGGCAAACAAGTCCACTTTTTAGACCGAAAGACTGTGCTTTaGTTGTTTCTTTTGGTACAA +
Preference number: 5 (lower is better)
Translates to: PRSKDPHWMMGKQVHFLDRKTVL*LFLLVQ
Trigger: TTGTACCAAAAGAAACAACAAAAGCACAGTCTTTCG...GTCTAAAAAGTGGACTTGTTTGCCCATCATCCAGTGAGGGTCTTTAGATCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp ATTCTATTGAGCGACACTGACACGCCATGGTCTAGAAAAAGGGAAATAATATCTGCCAGCAACATTTTGTaGATGATAGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: ILLSDTDTPWSRKREIISASNIL*MIELPA
Trigger: TGCTGGGAGTTCTATCATCAACAAAATGTTGCTGGC...AGATATTATTTCCCTTTTTCTAGACCATGGCGTGTCAGTGTCGCTCAATAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp GAATATGTGAGGACCTTGACTGACAGCTATATTCATCTCGATAAACTAGCCATTACAACTTCTAGAATCTaGTCATCAAAGGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: EYVRTLTDSYIHLDKLAITTSRI*SSKDGA
Trigger: TGCGCCATCCTTTGATGACAAGATTCTAGAAGTTGT...AATGGCTAGTTTATCGAGATGAATATAGCTGTCAGTCAAGGTCCTCACATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS-3UTR CAA 90 bp ATTATGTCAAAGACCTATTATGTGCTAGCTATACGCTGTGACTACAAAAATCGACTTTTGTTGTTTCTTTaGGTACAATCCAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: IMSKTYYVLAIRCDYKNRLLLFL*VQSRGG
Trigger: GCCTCCTCTGGATTGTACCAAAAGAAACAACAAAAG...TCGATTTTTGTAGTCACAGCGTATAGCTAGCACATAATAGGTCTTTGACATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226342.3
CDS CCA 72 bp CCTCTCCCGGTCCTGCAGCAGTGGGGGAAACCGCGCTaGCCCCAGCGACCGCTCCTCCCGCGACGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: PLPVLQQWGKPR*PQRPLLPRRPE
Trigger: CTCAGGGCGTCGCGGGAGGAGCGGTCGCTGGGGCCAGCGCGGTTTCCCCCACTGCTGCAGGACCGGGAGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS CCA 72 bp CACTGTCGGACGAATCCTCTCCCGGTCCTGCAGCAGTaGGGGAAACCGCGCTGGCCCCAGCGACCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: HCRTNPLPVLQQ*GKPRWPQRPLL
Trigger: GAGGAGCGGTCGCTGGGGCCAGCGCGGTTTCCCCCACTGCTGCAGGACCGGGAGAGGATTCGTCCGACAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS GCA 72 bp ACAGGCCGTGGGAGGTCACTCCAGAGAGACTCTCTCTaGACACGTTACAGAAGGTGGGCCGGGCGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: TGRGRSLQRDSL*TRYRRWAGRGS
Trigger: GCTCCCACGCCCGGCCCACCTTCTGTAACGTGTGCAGAGAGAGTCTCTCTGGAGTGACCTCCCACGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 90 bp GTGGCAGTGTCTCTCGTAAGGCTCTCCGGGAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGTGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VAVSLVRLSGKRGLA*FRACEQAFTACASS
Trigger: GGAGCTGGCACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGAGCCTTACGAGAGACACTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 72 bp GCAGTGTCTCTCGTAAGGCTCTCCGGGAAGCGTGGGTaGGCTTTGTTCAGGGCGTGTGAGCAGGCATTCACT +
Preference number: 6 (lower is better)
Translates to: AVSLVRLSGKRG*ALFRACEQAFT
Trigger: AGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGAGCCTTACGAGAGACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 72 bp TCTCTCGTAAGGCTCTCCGGGAAGCGTGGGTTGGCTTaGTTCAGGGCGTGTGAGCAGGCATTCACTGCATGT +
Preference number: 6 (lower is better)
Translates to: SLVRLSGKRGLA*FRACEQAFTAC
Trigger: ACATGCAGTGAATGCCTGCTCACACGCCCTGAACAAAGCCAACCCACGCTTCCCGGAGAGCCTTACGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS TCA 72 bp TCCACAGAGTGTAAGGCACTGGACACCCGCTCTTCGTaGGGAGATTCCAAGTGCAAAGGGACCCTGCCAACT +
Preference number: 6 (lower is better)
Translates to: STECKALDTRSS*GDSKCKGTLPT
Trigger: AGTTGGCAGGGTCCCTTTGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 72 bp ACTGGCCAAGGGGACAGACGGGATGGTACACATCTTTaGAGGCAGTGTGCACCATTGTCTTACACCAAAGGC +
Preference number: 6 (lower is better)
Translates to: TGQGDRRDGTHL*RQCAPLSYTKG
Trigger: GCCTTTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 72 bp CACTGGCCAAGGGGACAGACGGGATGGTACACATCTTaGCAGGCAGTGTGCACCATTGTCTTACACCAAAGG +
Preference number: 6 (lower is better)
Translates to: HWPRGQTGWYTS*QAVCTIVLHQR
Trigger: CCTTTGGTGTAAGACAATGGTGCACACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 72 bp ATGGAGACTTTACACTGGCCAAGGGGACAGACGGGATaGTACACATCTTTGCAGGCAGTGTGCACCATTGTC +
Preference number: 6 (lower is better)
Translates to: METLHWPRGQTG*YTSLQAVCTIV
Trigger: GACAATGGTGCACACTGCCTGCAAAGATGTGTACCATCCCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 72 bp ACTTCTGAAGCTCCATCTCCACAGAGTGTAAGGCACTaGACACCCGCTCTTCGTGAGGAGATTCCAAGTGCA +
Preference number: 6 (lower is better)
Translates to: TSEAPSPQSVRH*TPALREEIPSA
Trigger: TGCACTTGGAATCTCCTCACGAAGAGCGGGTGTCCAGTGCCTTACACTCTGTGGAGATGGAGCTTCAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 72 bp ACCAAAGGCATTTCCAATCTTGCAGGCGAAGCACACTaGCACAGGTTTTGTCACAGACTGCACACTTGGCAC +
Preference number: 6 (lower is better)
Translates to: TKGISNLAGEAH*HRFCHRLHTWH
Trigger: GTGCCAAGTGTGCAGTCTGTGACAAAACCTGTGGCAGTGTGCTTCGCCTGCAAGATTGGAAATGCCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 72 bp GCTCTTCGTGAGGAGATTCCAAGTGCAAAGGGACCCTaGCAACTAGCAAAGCCTCTGTCTCATTATAGAGCG +
Preference number: 6 (lower is better)
Translates to: ALREEIPSAKGP*QLAKPLSHYRA
Trigger: CGCTCTATAATGAGACAGAGGCTTTGCTAGTTGGCAGGGTCCCTTTGCACTTGGAATCTCCTCACGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CCA 72 bp CGGCCGCGAAGCTTGAAGTATCTCTTCTTCCACCTTTaGAAAGAGCTGGTTTGCTTCAGCAGTTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RPRSLKYLFFHL*KELVCFSSCPS
Trigger: GGAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCAAAGGTGGAAGAAGAGATACTTCAAGCTTCGCGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 72 bp CATCAGAGTCTGTGCTATTTAGTGCAATCGGAGGTATaGTGGAGACTTTACACTGGCCAAGGGGACAGACGG +
Preference number: 6 (lower is better)
Translates to: HQSLCYLVQSEV*WRLYTGQGDRR
Trigger: CCGTCTGTCCCCTTGGCCAGTGTAAAGTCTCCATCATACCTCCGATTGCACTAAATAGCACAGACTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 90 bp AAAGAGCTGGTTTGCTTCAGCAGTTGTCCTTCCTTAATACTAGTCTaGGTCCGCATCTGTCCAGAGGTGGACACTTTACGGATCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KELVCFSSCPSLILV*VRICPEVDTLRISF
Trigger: GAAGCTGATCCGTAAAGTGTCCACCTCTGGACAGATGCGGACCAAGACTAGTATTAAGGAAGGACAACTGCTGAAGCAAACCAGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS CAA 90 bp GTATCTCTTCTTCCACCTTTGGAAAGAGCTGGTTTGCTTCAGCAGTaGTCCTTCCTTAATACTAGTCTTGGTCCGCATCTGTCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: VSLLPPLERAGLLQQ*SFLNTSLGPHLSRG
Trigger: ACCTCTGGACAGATGCGGACCAAGACTAGTATTAAGGAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCAAAGGTGGAAGAAGAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 72 bp AGTCTTTCGCATAATAAAGTGTGCGGCCGCGAAGCTTaGAGTATCTCTTCTTCCACCTTTGGAAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLSHNKVCGREA*SISSSTFGKSW
Trigger: CCAGCTCTTTCCAAAGGTGGAAGAAGAGATACTTCAAGCTTCGCGGCCGCACACTTTATTATGCGAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS TCA 72 bp ATTTTGGTACTGGCTCGTTCCAGCTTCTCTAGTATCTaGGGGAGTTGGGTGTCATCATCATATGAACCTCCC +
Preference number: 6 (lower is better)
Translates to: ILVLARSSFSSI*GSWVSSSYEPP
Trigger: GGGAGGTTCATATGATGATGACACCCAACTCCCTCAGATACTAGAGAAGCTGGAACGAGCCAGTACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS TCA 72 bp CAGGTTCAGGAAGTAGAGACGACTTTGCTGGCAATTTaGGCTCATAGGTCATTATACTCCACCTGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QVQEVETTLLAI*AHRSLYSTCPA
Trigger: TGCTGGACAGGTGGAGTATAATGACCTATGAGCTCAAATTGCCAGCAAAGTCGTCTCTACTTCCTGAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 72 bp CTTCCACCTTTGGAAAGAGCTGGTTTGCTTCAGCAGTaGTCCTTCCTTAATACTAGTCTTGGTCCGCATCTG +
Preference number: 6 (lower is better)
Translates to: LPPLERAGLLQQ*SFLNTSLGPHL
Trigger: CAGATGCGGACCAAGACTAGTATTAAGGAAGGACAACTGCTGAAGCAAACCAGCTCTTTCCAAAGGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
CDS CAA 72 bp TTGGCAGACGATATGACCACCGCATGCTCATCAGAGTaGACGATTTTCGTAAGATGGTTTGCAACGGAGTCT +
Preference number: 6 (lower is better)
Translates to: LADDMTTACSSE*TIFVRWFATES
Trigger: AGACTCCGTTGCAAACCATCTTACGAAAATCGTCAACTCTGATGAGCATGCGGTGGTCATATCGTCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 72 bp CAGCGTGGTCCATTTGCAGTTGTTTGTTGCCCTCACTaGACATCTTTTATGAGCCTTGAACTTACACACTTC +
Preference number: 6 (lower is better)
Translates to: QRGPFAVVCCPH*TSFMSLELTHF
Trigger: GAAGTGTGTAAGTTCAAGGCTCATAAAAGATGTGCAGTGAGGGCAACAAACAACTGCAAATGGACCACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS GCA 72 bp TCACAGAGTATCTTGGCAGACGATATGACCACCGCATaGTCATCAGAGTTGACGATTTTCGTAAGATGGTTT +
Preference number: 6 (lower is better)
Translates to: SQSILADDMTTA*SSELTIFVRWF
Trigger: AAACCATCTTACGAAAATCGTCAACTCTGATGAGCATGCGGTGGTCATATCGTCTGCCAAGATACTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2
CDS CAA 72 bp CGGAGTCTTCATAAATTGTCATGTAAAATTCTTCAGTaGCTGCCACAGGTTCAGGAAGTAGAGACGACTTTG +
Preference number: 6 (lower is better)
Translates to: RSLHKLSCKILQ*LPQVQEVETTL
Trigger: CAAAGTCGTCTCTACTTCCTGAACCTGTGGCAGCAACTGAAGAATTTTACATGACAATTTATGAAGACTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074729.6
ENSMUST00000226342.3
ENSMUST00000227537.2
ENSMUST00000227767.2
ENSMUST00000228362.2