RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKG (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022861

Ensembl transcript IDs: ENSMUST00000023578.14, ENSMUST00000089925.10, ENSMUST00000137311.2

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTaGCGGTCGACCCAGGCCAAGGACATTTCCGTGGTAGCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: METLLPATWQESEVP*RSTQAKDISVVAGG
Trigger: CCCACCTGCTACCACGGAAATGTCCTTGGCCTGGGTCGACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 90 bp ACAAGTTCACCCTTGGCGGCCACACTGCCATCGGACTTCCCTCCTTaGCGGTCTCCGGAGACGGGGCATATGGAGGTAGGCAGCAAAATG +
Preference number: 1 (lower is better)
Translates to: TSSPLAATLPSDFPP*RSPETGHMEVGSKM
Trigger: CATTTTGCTGCCTACCTCCATATGCCCCGTCTCCGGAGACCGGCAAGGAGGGAAGTCCGATGGCAGTGTGGCCGCCAAGGGTGAACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR CCA 90 bp CCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTaGGGTATCATGAAAGAAGTTCAATCCTGGTGTAGGTCCCCCATT +
Preference number: 1 (lower is better)
Translates to: PANGPISATGKNTEV*GIMKEVQSWCRSPI
Trigger: AATGGGGGACCTACACCAGGATTGAACTTCTTTCATGATACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR TCA 90 bp GGAGTTCCCTTCCACCCACGCATGCTGCATCACCTGTGCAGAATTTaGGAAGACTGGATACTGTTTCTCGTAACCCGTGGATGCCCTGGT +
Preference number: 1 (lower is better)
Translates to: GVPFHPRMLHHLCRI*EDWILFLVTRGCPG
Trigger: ACCAGGGCATCCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAAGGGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 90 bp CACCGGTCACACTTGACGGAGGAGTTCCCTTCCACCCACGCATGCTaGATCACCTGTGCAGAATTTGAGAAGACTGGATACTGTTTCTCG +
Preference number: 1 (lower is better)
Translates to: HRSHLTEEFPSTHAC*ITCAEFEKTGYCFS
Trigger: CGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAAGGGAACTCCTCCGTCAAGTGTGACCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 90 bp TGGCACCGGTCACACTTGACGGAGGAGTTCCCTTCCACCCACGCATaGTGCATCACCTGTGCAGAATTTGAGAAGACTGGATACTGTTTC +
Preference number: 1 (lower is better)
Translates to: WHRSHLTEEFPSTHA*CITCAEFEKTGYCF
Trigger: GAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAAGGGAACTCCTCCGTCAAGTGTGACCGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 90 bp CAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCACATCCGATCTTaGTGTAGGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: QGFWVGALSLDHIRS*CRQETYNLEPYRSV
Trigger: CACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 90 bp TTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTaGCAAGGCTTCTGCTTGCAGAGCTGTGGGCTGTTTTGTTTTTAT +
Preference number: 1 (lower is better)
Translates to: LLEGQQSNHPVLAEP*QGFCLQSCGLFCFY
Trigger: ATAAAAACAAAACAGCCCACAGCTCTGCAAGCAGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 90 bp CTTGCTGTAGGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTaGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACC +
Preference number: 1 (lower is better)
Translates to: LAVGRKPTTWSLTGV*HRKREISPAGSKST
Trigger: GGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 90 bp CCCTTGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACAACCTaGAGCCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCT +
Preference number: 1 (lower is better)
Translates to: PLTTSDLAVGRKPTT*SLTGVWHRKREISP
Trigger: AGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR TCA 90 bp GCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAAAGTTGCTGCATaGGCCAACCCATCTTCGTGGGCCCTGAGTCCATTTGGAATATTT +
Preference number: 1 (lower is better)
Translates to: AQSLPKACGNVKVAA*ANPSSWALSPFGIF
Trigger: AAATATTCCAAATGGACTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACTTTCACATTCCCACAGGCTTTGGGTAGACTTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 90 bp AGTTGCTGCATGAGCCAACCCATCTTCGTGGGCCCTGAGTCCATTTaGAATATTTCATGGGTATTGGCTCTGTTAAGAGTGGATCCATTT +
Preference number: 1 (lower is better)
Translates to: SCCMSQPIFVGPESI*NISWVLALLRVDPF
Trigger: AAATGGATCCACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 90 bp GTGTTCATAGGAACTATGAAAATAAATACCACATCTAAAGCACGCTaGCCGGGCAGCCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAG +
Preference number: 1 (lower is better)
Translates to: VFIGTMKINTTSKAR*PGSLVCSLSKTATK
Trigger: CTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGGCTGCCCGGGCAGCGTGCTTTAGATGTGGTATTTATTTTCATAGTTCCTATGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTGTCTTCCTCCACTCTTaGGGTTCACCAGGACCAGCA +
Preference number: 2 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGVFLHS*GSPGPA
Trigger: TGCTGGTCCTGGTGAACCCCAAGAGTGGAGGAAGAC...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR TCA 90 bp GGGTGCCACCACGGCAGCCAGCGAGCTCGCTTACCTGCTGTTGAATTTTTCAGGCACTCTGGTAGCACTTaGTACTTTTGTGGCACCGGT +
Preference number: 2 (lower is better)
Translates to: GCHHGSQRARLPAVEFFRHSGST*YFCGTG
Trigger: ACCGGTGCCACAAAAGTATCAAGTGCTACCAGAGTG...CCTGAAAAATTCAACAGCAGGTAAGCGAGCTCGCTGGCTGCCGTGGTGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR GCA 90 bp CGCTGCCCGGGCAGCCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCGCCAAGGCTTCTGCTTaGAGAGCTGTGGGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: RCPGSLVCSLSKTATKRCAKASA*RAVGCF
Trigger: AAAACAGCCCACAGCTCTGCAAGCAGAAGCCTTGGC...GCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGGCTGCCCGGGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR TCA 90 bp TTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCAAGCCTGTGGGAATGTaGAAGTTGCTGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLEGQQSNHPVLAEPCQGKPVGM*KLLHEP
Trigger: TGGCTCATGCAGCAACTTTCACATTCCCACAGGCTT...GCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp CGCTGCCCGGGCAGCCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTGGCTTGGCTTCCTCTaGTTACAGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RCPGSLVCSLSKTATKRCWLGFL*LQVCVC
Trigger: ACACACACACACCTGTAACCAGAGGAAGCCAAGCCA...GCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGGCTGCCCGGGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 90 bp AGGAGTTCCCTTCCACCCACGCATGCTGCATCACCTGTGCAGAATTaGAGAAGACTGGATACTGTTTCTCGTAACCCGTGGATGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RSSLPPTHAASPVQN*RRLDTVSRNPWMPW
Trigger: CCAGGGCATCCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAAGGGAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR GCA 90 bp GAAAACTTGTTCGGGGTTGAGCAGGTAGTGAAATTTCCGAAGAATTCTTTCTCCCGGCACCACACGCAGTaGCGCGCGGTGACACTCTGG +
Preference number: 2 (lower is better)
Translates to: ENLFGVEQVVKFPKNSFSRHHTQ*RAVTLW
Trigger: CCAGAGTGTCACCGCGCGGCACTGCGTGTGGTGCCG...GGAGAAAGAATTCTTCGGAAATTTCACTACCTGCTCAACCCCGAACAAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR TCA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTCACCTGTGCAGAATTTaGGAAGACTGGATACTGTTT +
Preference number: 2 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGHLCRI*EDWILF
Trigger: AAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTG...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR GCA 90 bp GGGAGCTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGAATGTGAAAGTTGCTaGATGAGCCAACCCATCTTC +
Preference number: 2 (lower is better)
Translates to: GSCYLKDSKATILCSPSPECESC*MSQPIF
Trigger: GAAGATGGGTTGGCTCATGCAGCAACTTTCACATTC...AGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp GGGAGCTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTTTTGTGCAAGGTTTCTaGGTTGGAGCTCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GSCYLKDSKATILCSPSPFVQGF*VGALSL
Trigger: AAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAA...AGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 90 bp CGCCGAGCCCTGCCAAGGCTTCTGCTTGCAGAGCTGTGGGCTGTTTaGTTTTTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: RRALPRLLLAELWAV*FLYRRTFVQGFWVG
Trigger: TCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAAAAACAAAACAGCCCACAGCTCTGCAAGCAGAAGCCTTGGCAGGGCTCGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR GCA 90 bp AGGCAGGACAGCCACCGGTGGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATCTCCACCCACGCATGCTaGATCACCTGTGCAGAATTT +
Preference number: 2 (lower is better)
Translates to: RQDSHRWVLCEVSLINAISTHAC*ITCAEF
Trigger: AAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGA...GATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CCA 90 bp GGCAGGACAGCCACCGGTGGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATCCCACTTGATACTTTTGTaGCACCGGTCACACTTGACG +
Preference number: 2 (lower is better)
Translates to: GRTATGGCFVKLALSMQSHLILL*HRSHLT
Trigger: CGTCAAGTGTGACCGGTGCCACAAAAGTATCAAGTG...GGATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR CAA 90 bp ACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTaGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACAACCTGG +
Preference number: 2 (lower is better)
Translates to: TEGLLCKVSGLELFP*TTSDLAVGRKPTTW
Trigger: CCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR GCA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAACTGCATGGCAGGATTaGACTTTCCTCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGTAWQD*TFLWKV
Trigger: CACCTTCCAGAGGAAAGTGCAATCCTGCCATGCAGT...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp CTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCCCTGAGTCCATTTaGAATATTTCATGGGTATTG +
Preference number: 2 (lower is better)
Translates to: LLLEGQQSNHPVLAEPCQGPESI*NISWVL
Trigger: CAATACCCATGAAATATTCCAAATGGACTCAGGGCC...TTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR TCA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAACATCTTCGTGGGCCCTaGGTCCATTTGGAATATTTC +
Preference number: 2 (lower is better)
Translates to: REISPAGSKSTQSLWECEHLRGP*VHLEYF
Trigger: GAAATATTCCAAATGGACTCAGGGCCCACGAAGATG...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGTCTACCCAAAGCCTGTaGGAATGTGAAAGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMSTQSL*ECESCC
Trigger: GCAGCAACTTTCACATTCCCACAGGCTTTGGGTAGA...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR GCA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAACAGAAGGACTTTTGTaGAAGGTTTCTGGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGTEGLL*KVSGLE
Trigger: CTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGT...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CCA 90 bp TTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCTCTGGAAGGTGGCTTaGCTTCCTCTGGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: LYRRTFVQGFWVGALSLDLWKVA*LPLVTG
Trigger: ACCTGTAACCAGAGGAAGCCAAGCCACCTTCCAGAG...GTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR TCA 90 bp ACCAATGGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCGCAAAATGTGGTCTTTaGGTTCCCCACCGTCGCACA +
Preference number: 2 (lower is better)
Translates to: TNGEIVVHDVVWDLVSILAKCGL*VPHRRT
Trigger: TGTGCGACGGTGGGGAACTCAAAGACCACATTTTGC...GAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CCA 90 bp ACCAATGGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCGTAGGCAGCAAAATGTaGTCTTTGAGTTCCCCACCG +
Preference number: 2 (lower is better)
Translates to: TNGEIVVHDVVWDLVSILVGSKM*SLSSPP
Trigger: CGGTGGGGAACTCAAAGACCACATTTTGCTGCCTAC...GAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR GCA 90 bp ACCAATGGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCTCGATAATTCACATTTaGGGTGAAACGTCATCCGGC +
Preference number: 2 (lower is better)
Translates to: TNGEIVVHDVVWDLVSILSIIHI*GETSSG
Trigger: GCCGGATGACGTTTCACCGCAAATGTGAATTATCGA...GAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCCATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CAA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTTGGCACCGGTCACACTaGACGGAGGAGTTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGWHRSH*TEEFPS
Trigger: GGAAGGGAACTCCTCCGTCAAGTGTGACCGGTGCCA...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 72 bp GGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTaGCAAGGCTTCTGCTTGCAGAGCTGTGGGCTGTTT +
Preference number: 3 (lower is better)
Translates to: GQQSNHPVLAEP*QGFCLQSCGLF
Trigger: AAACAGCCCACAGCTCTGCAAGCAGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CAA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTAGCAAAATGTGGTCTTaGAGTTCCCCACCGTCGCAC +
Preference number: 3 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGSKMWS*SSPPSH
Trigger: GTGCGACGGTGGGGAACTCAAAGACCACATTTTGCT...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR TCA 72 bp AGGGGATGCGTCCCCGGGCTAGGGATGATCTTATACTaGGTTACAAGTTCACCCTTGGCGGCCACACTGCCA +
Preference number: 3 (lower is better)
Translates to: RGCVPGLGMILY*VTSSPLAATLP
Trigger: TGGCAGTGTGGCCGCCAAGGGTGAACTTGTAACTCAGTATAAGATCATCCCTAGCCCGGGGACGCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CAA 90 bp GGCATGACCTCTAGGTACCAACGGTCCAGCATCACCAAGGGGCTCTGTTCAATTTGTCTTCCTCCACTCTaGGGGTTCACCAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: GMTSRYQRSSITKGLCSICLPPL*GFTRTS
Trigger: GCTGGTCCTGGTGAACCCCAAGAGTGGAGGAAGACA...AATTGAACAGAGCCCCTTGGTGATGCTGGACCGTTGGTACCTAGAGGTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CAA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTGGTGTAGGTCCCCCATaGTCCAGGTTGAAAACTTGT +
Preference number: 3 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGGVGPP*SRLKTC
Trigger: ACAAGTTTTCAACCTGGACAATGGGGGACCTACACC...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 72 bp AGCTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTaGTCGCCGAGCCCTGCCAAGGCTTCTGCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: SCYLKDSKATIL*SPSPAKASACR
Trigger: TCTGCAAGCAGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 72 bp AAGTCTACCCAAAGCCTGTGGGAATGTGAAAGTTGCTaGATGAGCCAACCCATCTTCGTGGGCCCTGAGTCC +
Preference number: 3 (lower is better)
Translates to: KSTQSLWECESC*MSQPIFVGPES
Trigger: GGACTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACTTTCACATTCCCACAGGCTTTGGGTAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR TCA 72 bp CTACCCAAAGCCTGTGGGAATGTGAAAGTTGCTGCATaGGCCAACCCATCTTCGTGGGCCCTGAGTCCATTT +
Preference number: 3 (lower is better)
Translates to: LPKACGNVKVAA*ANPSSWALSPF
Trigger: AAATGGACTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACTTTCACATTCCCACAGGCTTTGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR TCA 72 bp CCGCCACAGGCAAGAACACGGAAGTCTGGGGTATCATaGAAGAAGTTCAATCCTGGTGTAGGTCCCCCATTG +
Preference number: 3 (lower is better)
Translates to: PPQARTRKSGVS*KKFNPGVGPPL
Trigger: CAATGGGGGACCTACACCAGGATTGAACTTCTTTCATGATACCCCAGACTTCCGTGTTCTTGCCTGTGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 72 bp TCAAAGTCTACCCAAAGCCTGTGGGAATGTGAAAGTTaGTGCATGAGCCAACCCATCTTCGTGGGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SKSTQSLWECES*CMSQPIFVGPE
Trigger: CTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACTTTCACATTCCCACAGGCTTTGGGTAGACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 72 bp TGGGTTGGAGCTCTTTCCCTTGACCACATCCGATCTTaGTGTAGGCAGGAAACCTACAACCTGGAGCCTTAC +
Preference number: 3 (lower is better)
Translates to: WVGALSLDHIRS*CRQETYNLEPY
Trigger: GTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp GGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTaGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: GRKPTTWSLTGV*HRKREISPAGS
Trigger: TGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp GGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTaGGGTATCATGAAAGAAGTTCAATCCTGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: GPISATGKNTEV*GIMKEVQSWCR
Trigger: CCTACACCAGGATTGAACTTCTTTCATGATACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CAA 90 bp AGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCACATCCCTCTGGAAGGTGGCTaGGCTTCCTCTGGTTACAGG +
Preference number: 3 (lower is better)
Translates to: RRTFVQGFWVGALSLDHIPLEGG*ASSGYR
Trigger: CCTGTAACCAGAGGAAGCCAAGCCACCTTCCAGAGG...GATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CAA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAGACTGCATGGCAGGATaGCACTTTCCTCTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGDCMAG*HFPLEG
Trigger: ACCTTCCAGAGGAAAGTGCAATCCTGCCATGCAGTC...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR-3UTR CAA 90 bp AGGCAGGACAGCCACCGGTGGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATCGTCCAGGTTGAAAACTaGTTCGGGGTTGAGCAGGTA +
Preference number: 3 (lower is better)
Translates to: RQDSHRWVLCEVSLINAIVQVEN*FGVEQV
Trigger: TACCTGCTCAACCCCGAACAAGTTTTCAACCTGGAC...GATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR TCA 72 bp CCACCACGGCAGCCAGCGAGCTCGCTTACCTGCTGTTaGATTTTTCAGGGTGTTTCTCTCTCATCATATGGA +
Preference number: 3 (lower is better)
Translates to: PPRQPASSLTCC*IFQGVSLSSYG
Trigger: TCCATATGATGAGAGAGAAACACCCTGAAAAATTCAACAGCAGGTAAGCGAGCTCGCTGGCTGCCGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR CCA 72 bp ATTGCACTTTCCTCTGGAAGGTGGCTTGGCTTCCTCTaGTTACAGGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: IALSSGRWLGFL*LQVCVCVCVCV
Trigger: CACACACACACACACACACACACACACCTGTAACCAGAGGAAGCCAAGCCACCTTCCAGAGGAAAGTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp ACATCCGATCTTGCTGTAGGCAGGAAACCTACAACCTaGAGCCTTACAGGAGTGTGGCACAGAAAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: TSDLAVGRKPTT*SLTGVWHRKRE
Trigger: CTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp GAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATaGAAACGGCTTTCCACAGCTTCTTGGCTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: EQVPMDSRGNQE*KRLSTASWLSP
Trigger: AGGGGAAAGCCAAGAAGCTGTGGAAAGCCGTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp GTCATTCCCTGTTCCAAGAGGCAGGACAGCCACCGGTaGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATC +
Preference number: 3 (lower is better)
Translates to: VIPCSKRQDSHR*VLCEVSLINAI
Trigger: GATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCTCTTGGAACAGGGAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR-3UTR CAA 90 bp TTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAACGGCTTTCCACAGCTTCTaGGCTTTCCCCTGCAAGTTA +
Preference number: 3 (lower is better)
Translates to: FRKRTSTHGQQREPRMETAFHSF*AFPCKL
Trigger: TAACTTGCAGGGGAAAGCCAAGAAGCTGTGGAAAGC...CGTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR TCA 72 bp TTCCACCCACGCATGCTGCATCACCTGTGCAGAATTTaGGAAGACTGGATACTGTTTCTCGTAACCCGTGGA +
Preference number: 3 (lower is better)
Translates to: FHPRMLHHLCRI*EDWILFLVTRG
Trigger: TCCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR GCA 72 bp TTCCCTGTTCCAAGAGGCAGGACAGCCACCGGTGGGTaGTTTGTGAAGTTAGCCTTATCAATGCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: FPVPRGRTATGG*FVKLALSMQSK
Trigger: TTTGGATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCTCTTGGAACAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
3UTR CCA 72 bp ATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTaGGAATGTGAAAGTTGCTGCATGAGCCAACCCATC +
Preference number: 3 (lower is better)
Translates to: ISPAGSKSTQSL*ECESCCMSQPI
Trigger: GATGGGTTGGCTCATGCAGCAACTTTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR TCA 72 bp AAGTTGCTGCATGAGCCAACCCATCTTCGTGGGCCCTaGGTCCATTTGGAATATTTCATGGGTATTGGCTCT +
Preference number: 3 (lower is better)
Translates to: KLLHEPTHLRGP*VHLEYFMGIGS
Trigger: AGAGCCAATACCCATGAAATATTCCAAATGGACTCAGGGCCCACGAAGATGGGTTGGCTCATGCAGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 72 bp CTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATaGTTCAGGAAGCGAACAAGTACCCATGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: LVCSLSKTATKR*FRKRTSTHGQQ
Trigger: CTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR GCA 72 bp CTGTTAAGAGTGGATCCATTTTCAAAACAGGTAGACTaGATGGCAGGATTGCACTTTCCTCTGGAAGGTGGC +
Preference number: 3 (lower is better)
Translates to: LLRVDPFSKQVD*MAGLHFPLEGG
Trigger: GCCACCTTCCAGAGGAAAGTGCAATCCTGCCATGCAGTCTACCTGTTTTGAAAATGGATCCACTCTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp ATGAGCCAACCCATCTTCGTGGGCCCTGAGTCCATTTaGAATATTTCATGGGTATTGGCTCTGTTAAGAGTG +
Preference number: 3 (lower is better)
Translates to: MSQPIFVGPESI*NISWVLALLRV
Trigger: CACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTCAGGGCCCACGAAGATGGGTTGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CCA 72 bp CACACCAATGGAGAAATAGTTGTTCATGATGTTGTATaGGACTTGGTCTCCATTCTCCACCTCTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: HTNGEIVVHDVV*DLVSILHLFPG
Trigger: CCCAGGGAAGAGGTGGAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCCATTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp TTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCTAGGACCAGCAGGGGATaGGTCCCCGGGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: LKDSKATILCSPSPAKASRTSRG*VPGLGM
Trigger: CATCCCTAGCCCGGGGACGCATCCCCTGCTGGTCCT...AGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp GCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGGTATCATGTGTGTGCTCAGTGGCTaGGGAAGGTCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ANGPISATGKNTEVWGIMCVLSG*GRSTSR
Trigger: CCTGGAGGTGGACCTTCCTCAGCCACTGAGCACACA...CATGATACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp CTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LEGQQSNHPVLAEPCQGFVWASG*RPGRGV
Trigger: CACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGAC...GAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp AATCCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGGTGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NPANGPISATGKNTEVWGVWASG*RPGRGV
Trigger: CACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGAC...ACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp TTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCTACTGGGCCAGTCTCCTaGCCGCACTCTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LKDSKATILCSPSPAKASTGPVS*PHSSGQ
Trigger: CTGGCCTGAAGAGTGCGGGCAGGAGACTGGCCCAGT...AGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GTTGGAGCTCTTTCCCTTGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACCGGCACCACACGCAGTaGCGCGCGGTGACACTCTGG +
Preference number: 4 (lower is better)
Translates to: VGALSLDHIRSCCRQETYRHHTQ*RAVTLW
Trigger: CCAGAGTGTCACCGCGCGGCACTGCGTGTGGTGCCG...GTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AATCCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGGTGCCTCCCATCGCCCTTaGAGCCAGAGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: NPANGPISATGKNTEVWGASHRP*SQSHPF
Trigger: GAATGGATGACTCTGGCTCCAAGGGCGATGGGAGGC...ACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp GAGGTAGGCAGCAAAATGTGGTCTTTGAGTTCCCCACCGTCGCACACTGTCGATCCAGAGAAAGCTCTCTaGGCCCCTTCCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: EVGSKMWSLSSPPSHTVDPEKAL*APSCAA
Trigger: CGCTGCGCAGGAAGGGGCTCAGAGAGCTTTCTCTGG...ATCGACAGTGTGCGACGGTGGGGAACTCAAAGACCACATTTTGCTGCCTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp TTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCTATGCAGCACAGGCCTTaGTTCCCAACACCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LKDSKATILCSPSPAKASMQHRP*FPTPIS
Trigger: GCTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCAT...AGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTGCTAATGGGCTTGTGTaGGTCATACTGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGANGLV*VILPEA
Trigger: AGCCTCAGGCAGTATGACCCACACAAGCCCATTAGC...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp CGCTGCCCGGGCAGCCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCGTCTTCCTCCACTCTTaGGGTTCACCAGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: RCPGSLVCSLSKTATKRCVFLHS*GSPGPA
Trigger: TGCTGGTCCTGGTGAACCCCAAGAGTGGAGGAAGAC...GCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGGCTGCCCGGGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp CTTGCTGTAGGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTGGCACAGACCTCTTCCCTGGGCATaGCCTCTAGGTACCAACGGT +
Preference number: 4 (lower is better)
Translates to: LAVGRKPTTWSLTGVWHRPLPWA*PLGTNG
Trigger: ACCGTTGGTACCTAGAGGTCATGCCCAGGGAAGAGG...TCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp GGGAGCTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTACCACTTCAAGGAGCTaGTCGCTGAGGTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: GSCYLKDSKATILCSPSPTTSRS*SLRSWT
Trigger: TGTCCAAGACCTCAGCGATCAGCTCCTTGAAGTGGT...AGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp CCGGCACCACACGCAGTGCCGCGCGGTGACACTCTGGTAGCACTTGATACTTTTAGGTACTGGGCAACGTaGAGCATTTGGCTCACAATC +
Preference number: 4 (lower is better)
Translates to: PAPHAVPRGDTLVALDTFRYWAT*SIWLTI
Trigger: GATTGTGAGCCAAATGCTGCACGTTGCCCAGTACCT...AAAAGTATCAAGTGCTACCAGAGTGTCACCGCGCGGCACTGCGTGTGGTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp GAGGTAGGCAGCAAAATGTGGTCTTTGAGTTCCCCACCGTCGCACACTGTCGATGAGGTGTGTGCTCAGTaGCTGAGGAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EVGSKMWSLSSPPSHTVDEVCAQ*LRKVHL
Trigger: GAGGTGGACCTTCCTCAGCCACTGAGCACACACCTC...ATCGACAGTGTGCGACGGTGGGGAACTCAAAGACCACATTTTGCTGCCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp TACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACTGTGTGCTCAGTGGCTaGGGAAGGTCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YRSVAQKKGDFSCRLKVYCVLSG*GRSTSR
Trigger: CCTGGAGGTGGACCTTCCTCAGCCACTGAGCACACA...GTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGCCAGGAAGAGGTGTGTaGTCAGTGGCTGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: DASGSEQVPMDSRGNQEWPGRGV*SVAEEG
Trigger: ACCTTCCTCAGCCACTGAGCACACACCTCTTCCTGG...CCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAACGAGGTGTGTGCTCAGTaGCTGAGGAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LQEANKYPWTAEGTKNGNEVCAQ*LRKVHL
Trigger: GAGGTGGACCTTCCTCAGCCACTGAGCACACACCTC...GTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp TTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAACGGCTGGCCCCCTCCTTTaGATGGTCAGGTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FRKRTSTHGQQREPRMETAGPLL*MVRCLL
Trigger: CAAGAGACACCTGACCATCCAAAGGAGGGGGCCAGC...CGTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTGGGCTCACTACTGCTaGCCCCCTCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: PYRSVAQKKGDFSCRLKVWAHYC*PPPLDG
Trigger: ACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCA...GACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AAATGGAAACCCTCCTTCCGGCAACGTGGCAGGAAAGCGAAGTCCCCTGGCGGTCCTCGCCACTCCTTTTaGCTTTGGAGTTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KWKPSFRQRGRKAKSPGGPRHSF*LWSLFS
Trigger: TGAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGG...ACCGCCAGGGGACTTCGCTTTCCTGCCACGTTGCCGGAAGGAGGGTTTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp ATGATGTTGTATGGGACTTGGTCTCCATTCTCCACCTCTTCCCTGGGCATGACCAGTAAGTGGGCTTCTTaGAGTGCTTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MMLYGTWSPFSTSSLGMTSKWAS*SASGSR
Trigger: CCTGGACCCTGAAGCACTTCAAGAAGCCCACTTACT...GGTCATGCCCAGGGAAGAGGTGGAGAATGGAGACCAAGTCCCATACAACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp GTTGGAGCTCTTTCCCTTGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACGCAAAATGTGGTCTTTaGGTTCCCCACCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: VGALSLDHIRSCCRQETYAKCGL*VPHRRT
Trigger: TGTGCGACGGTGGGGAACTCAAAGACCACATTTTGC...GTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp CCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTTCAGGAAGCGAACTCCACCCACGCATGCTaGATCACCTCGCCACTCCTT +
Preference number: 4 (lower is better)
Translates to: PCLLSKQNSHQEMLQEANSTHAC*ITSPLL
Trigger: AAGGAGTGGCGAGGTGATGCAGCATGCGTGGGTGGA...GTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTTCAGGAAGCGAACGCCTCCCATCGCCCTTaGAGCCAGAGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: PCLLSKQNSHQEMLQEANASHRP*SQSHPF
Trigger: GAATGGATGACTCTGGCTCCAAGGGCGATGGGAGGC...GTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GGGTGCCACCACGGCAGCCAGCGAGCTCGCTTACCTGCTGTTGAATTTTTCAGGATCCATGAATGGTTTTaGATACACAGCGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GCHHGSQRARLPAVEFFRIHEWF*IHSVGG
Trigger: TCCACCAACGCTGTGTATCCAAAACCATTCATGGAT...CCTGAAAAATTCAACAGCAGGTAAGCGAGCTCGCTGGCTGCCGTGGTGGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGTCTGTCCCATCTCCATaGCTCCCTCTAGACCCACCA +
Preference number: 4 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMSVPSP*LPLDPP
Trigger: TGGTGGGTCTAGAGGGAGCCATGGAGATGGGACAGA...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAGTAAGTGGGCTTCTTaGAGTGCTTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPSKWAS*SASGSR
Trigger: CCTGGACCCTGAAGCACTTCAAGAAGCCCACTTACT...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp TTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCTGGTGCCTGGTTTTTGTaGGTGATTTTAATCGTGCAT +
Preference number: 4 (lower is better)
Translates to: LKDSKATILCSPSPAKASGAWFL*VILIVH
Trigger: ATGCACGATTAAAATCACTCACAAAAACCAGGCACC...AGAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAGGATTTTGGTCAAGCTaGCCCCTTCGTAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPGFWSS*PLRNLL
Trigger: GAGGAGGTTACGAAGGGGGCAGCTTGACCAAAATCC...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp AGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCACATCCTCCCCAGAGATTGGTaGCTCCGTACATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRTFVQGFWVGALSLDHILPRDW*LRTCWE
Trigger: TTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAG...GATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAAGCTAATGGGCTTGTGTaGGTCATACTGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ASGSEQVPMDSRGNQEWKANGLV*VILPEA
Trigger: AGCCTCAGGCAGTATGACCCACACAAGCCCATTAGC...TTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp TCACCTGTGCAGAATTTGAGAAGACTGGATACTGTTTCTCGTAACCCGTGGATGTGGGCTCACTACTGCTaGCCCCCTCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SPVQNLRRLDTVSRNPWMWAHYC*PPPLDG
Trigger: ACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCA...CATCCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp CTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAACTCCCATTCCAGGTACTaGGCAACGTGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LQEANKYPWTAEGTKNGNSHSRY*ATCSIW
Trigger: CCAAATGCTGCACGTTGCCCAGTACCTGGAATGGGA...GTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCACATCCAGGACAGCCACCGGTaGGTGCTTTGTGAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: RRTFVQGFWVGALSLDHIQDSHR*VLCEVS
Trigger: GCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTG...GATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 72 bp CTTCCACCCACGCATGCTGCATCACCTGTGCAGAATTaGAGAAGACTGGATACTGTTTCTCGTAACCCGTGG +
Preference number: 4 (lower is better)
Translates to: LPPTHAASPVQN*RRLDTVSRNPW
Trigger: CCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGCATGCGTGGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp TTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTGTCTTAGTTGTTTTTaGTTCAGTGTCTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LLEGQQSNHPVLAEPCQGCLSCF*FSVWST
Trigger: TGTGCTCCAGACACTGAATCAAAAACAACTAAGACA...GCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGCACTCTGGTAGCACTTaGTACTTTTGTGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMHSGST*YFCGTG
Trigger: ACCGGTGCCACAAAAGTATCAAGTGCTACCAGAGTG...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGTCCACCTCCAGGTATaGCCTCATGAACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMVHLQV*PHEQLE
Trigger: TTCAAGCTGTTCATGAGGGCATACCTGGAGGTGGAC...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAAAGCACAGGCCTCATCTaGTTTGGCAGCATTATCCGA +
Preference number: 4 (lower is better)
Translates to: REISPAGSKSTQSLWECESTGLI*FGSIIR
Trigger: TCGGATAATGCTGCCAAAGCAGATGAGGCCTGTGCT...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGCTTCCAGGAAGATGTTaGTCAGATCCACCTCAACTC +
Preference number: 4 (lower is better)
Translates to: DASGSEQVPMDSRGNQEWLPGRC*SDPPQL
Trigger: GAGTTGAGGTGGATCTGAGCAACATCTTCCTGGAAG...CCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTTCAGGAAGCGAACTTTCTCCCCAGAGATTaGTGCCTCCGTACATGCTGG +
Preference number: 4 (lower is better)
Translates to: PCLLSKQNSHQEMLQEANFLPRD*CLRTCW
Trigger: CCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAA...GTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAAAAGCTGCTCTTCTaGGGAGGCCCCATCATCATA +
Preference number: 4 (lower is better)
Translates to: DASGSEQVPMDSRGNQEWKKLLF*GGPIII
Trigger: TATGATGATGGGGCCTCCCCAGAAGAGCAGCTTTTT...CCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 72 bp CTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTaGACCACATCCGATCTTGCTGTAGGCAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: LLCKVSGLELFP*TTSDLAVGRKP
Trigger: AGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp CTGTTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAATCTTCATCCTGCTGTTaGATTTTTCAGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLEGQQSNHPVLAEPCQSSSCC*IFQGVS
Trigger: AGAAACACCCTGAAAAATTCAACAGCAGGATGAAGA...TTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GCTGCATCACCTGTGCAGAATTTGAGAAGACTGGATACTGTTTCTCGTAACCCGGTCCACCTCCAGGTATaGCCTCATGAACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: AASPVQNLRRLDTVSRNPVHLQV*PHEQLE
Trigger: TTCAAGCTGTTCATGAGGGCATACCTGGAGGTGGAC...CGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp CCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCCCTTGTCATAGTCCATaGCTTGCAGCATCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PYRSVAQKKGDFSCRLKVPCHSP*LAASPS
Trigger: TGAAGGAGATGCTGCAAGGCATGGACTATGACAAGG...GACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 72 bp GATCCATTTTCAAAACAGGTAGACTGCATGGCAGGATaGCACTTTCCTCTGGAAGGTGGCTTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DPFSKQVDCMAG*HFPLEGGLASS
Trigger: AGAGGAAGCCAAGCCACCTTCCAGAGGAAAGTGCAATCCTGCCATGCAGTCTACCTGTTTTGAAAATGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp CGCACACTGTCGATAATTCACATTTGCGGTGAAACGTCATCCGGCACCACACGCGTTTTCACACATCCATaGATGGTTTTGGATACACAG +
Preference number: 4 (lower is better)
Translates to: RTLSIIHICGETSSGTTRVFTHP*MVLDTQ
Trigger: CTGTGTATCCAAAACCATTCATGGATGTGTGAAAAC...GCGTGTGGTGCCGGATGACGTTTCACCGCAAATGTGAATTATCGACAGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR TCA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAAACTTGTTCGGGGTTaGGCAGGTAGTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGKLVRG*AGSEIS
Trigger: GGAAATTTCACTACCTGCTCAACCCCGAACAAGTTT...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GAAAACTTGTTCGGGGTTGAGCAGGTAGTGAAATTTCCGAAGAATTCTTTCTCCCCAGGAAGAGGTGTGTaGTCAGTGGCTGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ENLFGVEQVVKFPKNSFSPGRGV*SVAEEG
Trigger: ACCTTCCTCAGCCACTGAGCACACACCTCTTCCTGG...GGAGAAAGAATTCTTCGGAAATTTCACTACCTGCTCAACCCCGAACAAGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp GAAAACTTGTTCGGGGTTGAGCAGGTAGTGAAATTTCCGAAGAATTCTTTCTCCGTGGGCTTCTTGAAGTaGTTCAGGGTCCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: ENLFGVEQVVKFPKNSFSVGFLK*FRVQAC
Trigger: GCATGCCTGGACCCTGAAGCACTTCAAGAAGCCCAC...GGAGAAAGAATTCTTCGGAAATTTCACTACCTGCTCAACCCCGAACAAGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGACCCCATCATCATAGGTaGCTGGTTTTTGTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGPHHHR*LVFVSD
Trigger: ATCACTCACAAAAACCAGGCACCTATGATGATGGGG...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCCACCTCTCCCATTCCAGGTACTaGGCAACGTGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: GEIVVHDVVWDLVSILHLSHSRY*ATCSIW
Trigger: CCAAATGCTGCACGTTGCCCAGTACCTGGAATGGGA...GAGGTGGAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp GGCATGACCTCTAGGTACCAACGGTCCAGCATCACCAAGGGGCTCTGTTCAATTTCACACATCCATGAATaGTTTTGGATACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: GMTSRYQRSSITKGLCSISHIHE*FWIHSV
Trigger: AACGCTGTGTATCCAAAACCATTCATGGATGTGTGA...AATTGAACAGAGCCCCTTGGTGATGCTGGACCGTTGGTACCTAGAGGTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CCA 90 bp TTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACGGAGTTTCTTGCAGGTaGCTGCAAAGGTTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LYRRTFVQGFWVGALSLDGVSCR*LQRFPR
Trigger: CCTCGGAAACCTTTGCAGCCACCTGCAAGAAACTCC...GTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp TACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCACTCCAGCTCTATGTaGTCATGGAGTTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YRSVAQKKGDFSCRLKVYHSSSM*SWSFLQ
Trigger: CTGCAAGAAACTCCATGACCACATAGAGCTGGAGTG...GTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCCCTCGCCACTCCTTTTaGCTTTGGAGTTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PYRSVAQKKGDFSCRLKVPRHSF*LWSLFS
Trigger: TGAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGG...GACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GGAAACCTACAACCTGGAGCCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCACTTGATACTTTTGTaGCACCGGTCACACTTGACG +
Preference number: 4 (lower is better)
Translates to: GNLQPGALQECGTEKGRFHLILL*HRSHLT
Trigger: CGTCAAGTGTGACCGGTGCCACAAAAGTATCAAGTG...AAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp TTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACAGGTACTGGGCAACGTaGAGCATTTGGCTCACAATC +
Preference number: 4 (lower is better)
Translates to: LYRRTFVQGFWVGALSLDRYWAT*SIWLTI
Trigger: GATTGTGAGCCAAATGCTGCACGTTGCCCAGTACCT...GTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp ACCAATGGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCATGCAGCACAGGCCTTaGTTCCCAACACCCATCAGC +
Preference number: 4 (lower is better)
Translates to: TNGEIVVHDVVWDLVSILMQHRP*FPTPIS
Trigger: GCTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCAT...GAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAATATATTTACAGTAGATaGAGCACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: REISPAGSKSTQSLWECEYIYSR*STGLAS
Trigger: GGAAGCAAGGCCTGTGCTGCATCTACTGTAAATATA...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAATCCATGAATGGTTTTaGATACACAGCGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPIHEWF*IHSVGG
Trigger: TCCACCAACGCTGTGTATCCAAAACCATTCATGGAT...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp CTTTCCCTTGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACAACCTGGAGTCACACATCCATGAATaGTTTTGGATACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: LSLDHIRSCCRQETYNLESHIHE*FWIHSV
Trigger: AACGCTGTGTATCCAAAACCATTCATGGATGTGTGA...CTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR TCA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAAGTTTTCACACATCCATaGATGGTTTTGGATACACAG +
Preference number: 4 (lower is better)
Translates to: REISPAGSKSTQSLWECEVFTHP*MVLDTQ
Trigger: CTGTGTATCCAAAACCATTCATGGATGTGTGAAAAC...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GAGTCCATTTGGAATATTTCATGGGTATTGGCTCTGTTAAGAGTGGATCCATTTGTGGGCTTCTTGAAGTaGTTCAGGGTCCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: ESIWNISWVLALLRVDPFVGFLK*FRVQAC
Trigger: GCATGCCTGGACCCTGAAGCACTTCAAGAAGCCCAC...AAATGGATCCACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAAAAGAACACGGAAGTCTaGGGTATCATGAAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: REISPAGSKSTQSLWECEKNTEV*GIMKEV
Trigger: AACTTCTTTCATGATACCCCAGACTTCCGTGTTCTT...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR GCA 90 bp GAAAACTTGTTCGGGGTTGAGCAGGTAGTGAAATTTCCGAAGAATTCTTTCTCCCCTTGTCATAGTCCATaGCTTGCAGCATCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ENLFGVEQVVKFPKNSFSPCHSP*LAASPS
Trigger: TGAAGGAGATGCTGCAAGGCATGGACTATGACAAGG...GGAGAAAGAATTCTTCGGAAATTTCACTACCTGCTCAACCCCGAACAAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp TCACCTGTGCAGAATTTGAGAAGACTGGATACTGTTTCTCGTAACCCGTGGATGTATATTTACAGTAGATaGAGCACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPVQNLRRLDTVSRNPWMYIYSR*STGLAS
Trigger: GGAAGCAAGGCCTGTGCTGCATCTACTGTAAATATA...CATCCACGGGTTACGAGAAACAGTATCCAGTCTTCTCAAATTCTGCACAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR GCA 90 bp TTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACTCGATAATTCACATTTaGGGTGAAACGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: LYRRTFVQGFWVGALSLDSIIHI*GETSSG
Trigger: GCCGGATGACGTTTCACCGCAAATGTGAATTATCGA...GTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 72 bp TTTTATACAGAAGGACTTTTGTGCAAGGTTTCTGGGTaGGAGCTCTTTCCCTTGACCACATCCGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: FYTEGLLCKVSG*ELFPLTTSDLA
Trigger: AGCAAGATCGGATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCTGTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CCA 90 bp GAGTCCATTTGGAATATTTCATGGGTATTGGCTCTGTTAAGAGTGGATCCATTTGTAGGCAGCAAAATGTaGTCTTTGAGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: ESIWNISWVLALLRVDPFVGSKM*SLSSPP
Trigger: CGGTGGGGAACTCAAAGACCACATTTTGCTGCCTAC...AAATGGATCCACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
3UTR CAA 72 bp GTGGGCCCTGAGTCCATTTGGAATATTTCATGGGTATaGGCTCTGTTAAGAGTGGATCCATTTTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: VGPESIWNISWV*ALLRVDPFSKQ
Trigger: CTGTTTTGAAAATGGATCCACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTCAGGGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp TTACTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCATCGGACTTCCCTCCTaGCCGGTCTCCGGAGACGGG +
Preference number: 5 (lower is better)
Translates to: LLEGQQSNHPVLAEPCQGIGLPS*PVSGDG
Trigger: CCCGTCTCCGGAGACCGGCAAGGAGGGAAGTCCGAT...GCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS TCA 90 bp CACCCATCAGCATGGCGCGGCAGAAGTTGCAGTAAGTGGGCTTCTTaGAGTGCTTCAGGGTCCAGGCATGCCTCCCATCGCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: HPSAWRGRSCSKWAS*SASGSRHASHRPWS
Trigger: GCTCCAAGGGCGATGGGAGGCATGCCTGGACCCTGAAGCACTTCAAGAAGCCCACTTACTGCAACTTCTGCCGCGCCATGCTGATGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp GGACTTCCCTCCTTGCCGGTCTCCGGAGACGGGGCATATGGAGGTAGGCAGCAAGTGGTCATTCCCCCGTaGATCCACTCCTGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: GLPSLPVSGDGAYGGRQQVVIPP*IHSCRD
Trigger: GTCTCTACAGGAGTGGATCAACGGGGGAATGACCAC...TTGCTGCCTACCTCCATATGCCCCGTCTCCGGAGACCGGCAAGGAGGGAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS TCA 90 bp CCCCCTCCTTTGGATGGTCAGGTGTCTCTTGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGTGTGCTCAGTGGCTGAGGAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: PPPLDGQVSLVWASG*RPGRGVCSVAEEGP
Trigger: TGGACCTTCCTCAGCCACTGAGCACACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGACAAGAGACACCTGACCATCCAAAGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp AATCCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGGTGATGCAGCACAGGCCTaGCTTCCCAACACCCATCAG +
Preference number: 5 (lower is better)
Translates to: NPANGPISATGKNTEVWGDAAQA*LPNTHQ
Trigger: CTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCATC...ACCCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS TCA 90 bp TCCGGGATGATGGATGTGTCGCCCCCGAGGCAGCATGCAGTACAATaGGCCCATAGGTGTCACCAACCTCGCCACTCCTTTTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SGMMDVSPPRQHAVQ*AHRCHQPRHSFWLW
Trigger: CCAAAGCCAAAAGGAGTGGCGAGGTTGGTGACACCTATGGGCTCATTGTACTGCATGCTGCCTCGGGGGCGACACATCCATCATCCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp CTTGAAGGACAGCAAAGCAACCATCCTGTGCTCGCCGAGCCCTGCCAAGGCTTCGTTTCTCCCCAGAGATaGGTGCCTCCGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: LEGQQSNHPVLAEPCQGFVSPQR*VPPYML
Trigger: CAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAC...GAAGCCTTGGCAGGGCTCGGCGAGCACAGGATGGTTGCTTTGCTGTCCTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS CCA 90 bp TTGTCTGGGCTTCTGGCTGAAGGCCAGGAAGAGGTGTGTGCTCAGTaGCTGAGGAAGGTCCACCTCCAGGTATGCCCTCATGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: LSGLLAEGQEEVCAQ*LRKVHLQVCPHEQL
Trigger: AAGCTGTTCATGAGGGCATACCTGGAGGTGGACCTTCCTCAGCCACTGAGCACACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CCA 90 bp AAGGAGCTGATCGCTGAGGTCTTGGACACAGCATTTCAGCTCCTTTaGGTCTGTGACGCTCTTCCTGCTTTCCCGGATCACAGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: KELIAEVLDTAFQLL*VCDALPAFPDHSPV
Trigger: AACCGGGCTGTGATCCGGGAAAGCAGGAAGAGCGTCACAGACCCAAAGGAGCTGAAATGCTGTGTCCAAGACCTCAGCGATCAGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AAAATCCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGATGGTCAGGTGTCTCTaGTCTGGGCTTCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: KIQPTVPSPPQARTRKSGMVRCL*SGLLAE
Trigger: TTCAGCCAGAAGCCCAGACAAGAGACACCTGACCAT...CCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp AAAATCCAGCCAACGGTCCCATCTCCGCCACAGGCAAGAACACGGAAGTCTGGGCTGATCCATCTCCGCTaGGTCCAGGAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: KIQPTVPSPPQARTRKSGLIHLR*VQESIF
Trigger: GAAAATGGACTCCTGGACCAAGCGGAGATGGATCAG...CCCAGACTTCCGTGTTCTTGCCTGTGGCGGAGATGGGACCGTTGGCTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp CTTGCTGTAGGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTGGCACAGAGATGCAGCACAGGCCTaGCTTCCCAACACCCATCAG +
Preference number: 5 (lower is better)
Translates to: LAVGRKPTTWSLTGVWHRDAAQA*LPNTHQ
Trigger: CTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCATC...TCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS TCA 90 bp CCATTCCCAGGAGGACCAGCAAAGGGATGGTGGTCATTCCCCCGTTaGTCCACTCCTGTAGAGACACGAAGCCATCCTTGTCATAGTCCA +
Preference number: 5 (lower is better)
Translates to: PFPGGPAKGWWSFPR*STPVETRSHPCHSP
Trigger: TGGACTATGACAAGGATGGCTTCGTGTCTCTACAGGAGTGGATCAACGGGGGAATGACCACCATCCCTTTGCTGGTCCTCCTGGGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCACGGGAGCATCTGAGCTaGAAGCCAGAGCACCTGGGT +
Preference number: 5 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPREHLS*KPEHLG
Trigger: ACCCAGGTGCTCTGGCTTCAAGCTCAGATGCTCCCG...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp GGGTGCCACCACGGCAGCCAGCGAGCTCGCTTACCTGCTGTTGAATTTTTCAGGGTCATAGTCCATGCCTaGCAGCATCTCCTTCAGTAT +
Preference number: 5 (lower is better)
Translates to: GCHHGSQRARLPAVEFFRVIVHA*QHLLQY
Trigger: ATACTGAAGGAGATGCTGCAAGGCATGGACTATGAC...CCTGAAAAATTCAACAGCAGGTAAGCGAGCTCGCTGGCTGCCGTGGTGGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp GGACTTCCCTCCTTGCCGGTCTCCGGAGACGGGGCATATGGAGGTAGGCAGCAACCACTCCTTTTGGCTTaGGAGTTTGTTTTCACACAT +
Preference number: 5 (lower is better)
Translates to: GLPSLPVSGDGAYGGRQQPLLLA*EFVFTH
Trigger: ATGTGTGAAAACAAACTCCAAAGCCAAAAGGAGTGG...TTGCTGCCTACCTCCATATGCCCCGTCTCCGGAGACCGGCAAGGAGGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp GGAAACCTACAACCTGGAGCCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTTGGCACCGGTCACACTaGACGGAGGAGTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GNLQPGALQECGTEKGRFWHRSH*TEEFPS
Trigger: GGAAGGGAACTCCTCCGTCAAGTGTGACCGGTGCCA...AAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS GCA 90 bp GAAGAGGTGTGTGCTCAGTGGCTGAGGAAGGTCCACCTCCAGGTATaGCCTCATGAACAGCTTGAAGACATCATAGCTAATGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: EEVCAQWLRKVHLQV*PHEQLEDIIANGLV
Trigger: CACAAGCCCATTAGCTATGATGTCTTCAAGCTGTTCATGAGGGCATACCTGGAGGTGGACCTTCCTCAGCCACTGAGCACACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS GCA 90 bp TGGTTTTGGATACACAGCGTTGGTGGACTGTATATTTACAGTAGATaGAGCACAGGCCTTGCTTCCCAACACCCATCAGCATGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: WFWIHSVGGLYIYSR*STGLASQHPSAWRG
Trigger: GCCGCGCCATGCTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCATCTACTGTAAATATACAGTCCACCAACGCTGTGTATCCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 90 bp AGCACAGGCCTCATCTGCTTTGGCAGCATTATCCGAATTATAATCTaGGACATTGGGCTCACTACTGCTGGCCCCCTCCTTTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: STGLICFGSIIRIII*DIGLTTAGPLLWMV
Trigger: GACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGGATAATGCTGCCAAAGCAGATGAGGCCTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS GCA 90 bp TGGCAGCATTATCCGAATTATAATCTGAGACATTGGGCTCACTACTaGTGGCCCCCTCCTTTGGATGGTCAGGTGTCTCTTGTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WQHYPNYNLRHWAHY*WPPPLDGQVSLVWA
Trigger: AGCCCAGACAAGAGACACCTGACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGGATAATGCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAATGGTCAGGTGTCTCTaGTCTGGGCTTCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGMVRCL*SGLLAE
Trigger: TTCAGCCAGAAGCCCAGACAAGAGACACCTGACCAT...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp CCTTACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCACAGCCCGGTTCTTCTaGGTTTCTCCCCAGAGATTG +
Preference number: 5 (lower is better)
Translates to: PYRSVAQKKGDFSCRLKVTARFF*VSPQRL
Trigger: CAATCTCTGGGGAGAAACCAAGAAGAACCGGGCTGT...GACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCACTGATCGCTGAGGTCTaGGACACAGCATTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPLIAEV*DTAFQL
Trigger: GAGCTGAAATGCTGTGTCCAAGACCTCAGCGATCAG...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS CCA 90 bp CAGCATTATCCGAATTATAATCTGAGACATTGGGCTCACTACTGCTaGCCCCCTCCTTTGGATGGTCAGGTGTCTCTTGTCTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QHYPNYNLRHWAHYC*PPPLDGQVSLVWAS
Trigger: AGAAGCCCAGACAAGAGACACCTGACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGGATAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp AGGCAGGACAGCCACCGGTGGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATCCAGGCCTCATCTGCTTaGGCAGCATTATCCGAATTA +
Preference number: 5 (lower is better)
Translates to: RQDSHRWVLCEVSLINAIQASSA*AALSEL
Trigger: TAATTCGGATAATGCTGCCAAAGCAGATGAGGCCTG...GATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp CCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTTCAGGAAGCGAACCTGATCCATCTCCGCTaGGTCCAGGAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: PCLLSKQNSHQEMLQEANLIHLR*VQESIF
Trigger: GAAAATGGACTCCTGGACCAAGCGGAGATGGATCAG...GTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp CTTTCCCTTGACCACATCCGATCTTGCTGTAGGCAGGAAACCTACAACCTGGAGGTCATAGTCCATGCCTaGCAGCATCTCCTTCAGTAT +
Preference number: 5 (lower is better)
Translates to: LSLDHIRSCCRQETYNLEVIVHA*QHLLQY
Trigger: ATACTGAAGGAGATGCTGCAAGGCATGGACTATGAC...CTCCAGGTTGTAGGTTTCCTGCCTACAGCAAGATCGGATGTGGTCAAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAGATGTTGTATGGGACTaGGTCTCCATTCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGDVVWD*VSILHL
Trigger: GAGGTGGAGAATGGAGACCAAGTCCCATACAACATC...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp TTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAACGTGGTCATGGAGTTTCTaGCAGGTGGCTGCAAAGGTT +
Preference number: 5 (lower is better)
Translates to: FRKRTSTHGQQREPRMETWSWSF*QVAAKV
Trigger: AACCTTTGCAGCCACCTGCAAGAAACTCCATGACCA...CGTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGCCTTCCAGGAAGATGTaGCTCAGATCCACCTCAACT +
Preference number: 5 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMPSRKM*LRSTST
Trigger: AGTTGAGGTGGATCTGAGCAACATCTTCCTGGAAGG...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp ATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAGATTTTAATCGTGCATaGTGGCTGCATCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: MLQEANKYPWTAEGTKNGDFNRA*WLHPGL
Trigger: GAGCCCTGGATGCAGCCACAATGCACGATTAAAATC...TCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGGCAGGACAGCCACCGGTGGGTGCTTTGTGAAGTTAGCCTTATCAATGCAATCACCTCGCCACTCCTTTaGGCTTTGGAGTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: RQDSHRWVLCEVSLINAITSPLL*ALEFVF
Trigger: GAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGGT...GATTGCATTGATAAGGCTAACTTCACAAAGCACCCACCGGTGGCTGTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp AGATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGCAGGCCTCATCTGCTTaGGCAGCATTATCCGAATTA +
Preference number: 5 (lower is better)
Translates to: RCFRKRTSTHGQQREPRMQASSA*AALSEL
Trigger: TAATTCGGATAATGCTGCCAAAGCAGATGAGGCCTG...CATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp CCTTGTTTGCTCTCTAAGCAAAACAGCCACCAAGAGATGCTTCAGGAAGCGAACGTCCAGGTTGAAAACTaGTTCGGGGTTGAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: PCLLSKQNSHQEMLQEANVQVEN*FGVEQV
Trigger: TACCTGCTCAACCCCGAACAAGTTTTCAACCTGGAC...GTTCGCTTCCTGAAGCATCTCTTGGTGGCTGTTTTGCTTAGAGAGCAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGAAGGACTTTTGTGCAAGGTTTCTGGGTTGGAGCTCTTTCCCTTGACCACATCGGTGTAGGTCCCCCATaGTCCAGGTTGAAAACTTGT +
Preference number: 5 (lower is better)
Translates to: RRTFVQGFWVGALSLDHIGVGPP*SRLKTC
Trigger: ACAAGTTTTCAACCTGGACAATGGGGGACCTACACC...GATGTGGTCAAGGGAAAGAGCTCCAACCCAGAAACCTTGCACAAAAGTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAAAGCCTGTGGGAATGTGAATGCATCGGCAGAAGCTaGTTAGTCCTAATGGTGACA +
Preference number: 5 (lower is better)
Translates to: REISPAGSKSTQSLWECECIGRS*LVLMVT
Trigger: TGTCACCATTAGGACTAACAAGCTTCTGCCGATGCA...TTCACATTCCCACAGGCTTTGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACCCAACCTCGCCACTCCTTTaGGCTTTGGAGTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: RSVAQKKGDFSCRLKVYPTSPLL*ALEFVF
Trigger: GAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGGT...TGGGTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS CCA 90 bp TGCCCTCATGAACAGCTTGAAGACATCATAGCTAATGGGCTTGTGTaGGTCATACTGCCTGAGGCTTCCACCTTCATTAAACTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: CPHEQLEDIIANGLV*VILPEASTFIKLSQ
Trigger: TTGGCTGAGTTTAATGAAGGTGGAAGCCTCAGGCAGTATGACCCACACAAGCCCATTAGCTATGATGTCTTCAAGCTGTTCATGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS-3UTR CAA 90 bp GATGCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGCCACTCCTTTTGGCTTaGGAGTTTGTTTTCACACAT +
Preference number: 5 (lower is better)
Translates to: DASGSEQVPMDSRGNQEWPLLLA*EFVFTH
Trigger: ATGTGTGAAAACAAACTCCAAAGCCAAAAGGAGTGG...CCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp TACAGGAGTGTGGCACAGAAAAAGGGAGATTTCTCCTGCAGGCTCAAAGTCTACGGAATCTGTGTGCAATaGAAGCATCCACACCAATGG +
Preference number: 5 (lower is better)
Translates to: YRSVAQKKGDFSCRLKVYGICVQ*KHPHQW
Trigger: CCATTGGTGTGGATGCTTCAATTGCACACAGATTCC...GTAGACTTTGAGCCTGCAGGAGAAATCTCCCTTTTTCTGTGCCACACTCCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp CTTGCTGTAGGCAGGAAACCTACAACCTGGAGCCTTACAGGAGTGTGGCACAGATTTTGGCTTTGGAGTTaGTTTTCACACATCCATGAA +
Preference number: 5 (lower is better)
Translates to: LAVGRKPTTWSLTGVWHRFWLWS*FSHIHE
Trigger: TTCATGGATGTGTGAAAACAAACTCCAAAGCCAAAA...TCTGTGCCACACTCCTGTAAGGCTCCAGGTTGTAGGTTTCCTGCCTACAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AAAGTCCACTTTCTCAGCTCTTCCTCCCAAGTGTTCATAGGAACTATGAAAATATGTCTTCCTCCACTCTaGGGGTTCACCAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: KVHFLSSSSQVFIGTMKICLPPL*GFTRTS
Trigger: GCTGGTCCTGGTGAACCCCAAGAGTGGAGGAAGACA...TATTTTCATAGTTCCTATGAACACTTGGGAGGAAGAGCTGAGAAAGTGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp AAAGTCCACTTTCTCAGCTCTTCCTCCCAAGTGTTCATAGGAACTATGAAAATAGTGGTCATTCCCCCGTaGATCCACTCCTGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: KVHFLSSSSQVFIGTMKIVVIPP*IHSCRD
Trigger: GTCTCTACAGGAGTGGATCAACGGGGGAATGACCAC...TATTTTCATAGTTCCTATGAACACTTGGGAGGAAGAGCTGAGAAAGTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp GCTTCAGGAAGCGAACAAGTACCCATGGACAGCAGAGGGAACCAAGAATGGAAATTCTTCATCCTGCTGTaGAATTTTTCAGGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ASGSEQVPMDSRGNQEWKFFILL*NFSGCF
Trigger: GAAACACCCTGAAAAATTCAACAGCAGGATGAAGAA...TTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTCCTGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp GAGTCCATTTGGAATATTTCATGGGTATTGGCTCTGTTAAGAGTGGATCCATTTAGCAAAATGTGGTCTTaGAGTTCCCCACCGTCGCAC +
Preference number: 5 (lower is better)
Translates to: ESIWNISWVLALLRVDPFSKMWS*SSPPSH
Trigger: GTGCGACGGTGGGGAACTCAAAGACCACATTTTGCT...AAATGGATCCACTCTTAACAGAGCCAATACCCATGAAATATTCCAAATGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS-3UTR CAA 90 bp GGAGAAATAGTTGTTCATGATGTTGTATGGGACTTGGTCTCCATTCTCCACCTCTTTTGGCTTTGGAGTTaGTTTTCACACATCCATGAA +
Preference number: 5 (lower is better)
Translates to: GEIVVHDVVWDLVSILHLFWLWS*FSHIHE
Trigger: TTCATGGATGTGTGAAAACAAACTCCAAAGCCAAAA...GAGGTGGAGAATGGAGACCAAGTCCCATACAACATCATGAACAACTATTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS CAA 72 bp AAGTGCTTCAGGGTCCAGGCATGCCTCCCATCGCCCTaGGAGCCAGAGTCATCCATTCCCAGGAGGACCAGC +
Preference number: 6 (lower is better)
Translates to: KCFRVQACLPSP*EPESSIPRRTS
Trigger: GCTGGTCCTCCTGGGAATGGATGACTCTGGCTCCAAGGGCGATGGGAGGCATGCCTGGACCCTGAAGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 72 bp TTGGATGGTCAGGTGTCTCTTGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGTGTGCTCAGTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: LDGQVSLVWASG*RPGRGVCSVAE
Trigger: CTCAGCCACTGAGCACACACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGACAAGAGACACCTGACCATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 72 bp ATGGATGTGTCGCCCCCGAGGCAGCATGCAGTACAATaGGCCCATAGGTGTCACCAACCTCGCCACTCCTTT +
Preference number: 6 (lower is better)
Translates to: MDVSPPRQHAVQ*AHRCHQPRHSF
Trigger: AAAGGAGTGGCGAGGTTGGTGACACCTATGGGCTCATTGTACTGCATGCTGCCTCGGGGGCGACACATCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137311.2
CDS CCA 72 bp ACATTGGGCTCACTACTGCTGGCCCCCTCCTTTGGATaGTCAGGTGTCTCTTGTCTGGGCTTCTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TLGSLLLAPSFG*SGVSCLGFWLK
Trigger: CTTCAGCCAGAAGCCCAGACAAGAGACACCTGACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 90 bp AGTAACACACGACATCCTTCAGGTACACTACGGGAGCATCTGAGCTaGAAGCCAGAGCACCTGGGTCTTCCCATGGGGCTGCAGCCTCTA +
Preference number: 6 (lower is better)
Translates to: SNTRHPSGTLREHLS*KPEHLGLPMGLQPL
Trigger: TAGAGGCTGCAGCCCCATGGGAAGACCCAGGTGCTCTGGCTTCAAGCTCAGATGCTCCCGTAGTGTACCTGAAGGATGTCGTGTGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 72 bp GGAGGACCAGCAAAGGGATGGTGGTCATTCCCCCGTTaGTCCACTCCTGTAGAGACACGAAGCCATCCTTGT +
Preference number: 6 (lower is better)
Translates to: GGPAKGWWSFPR*STPVETRSHPC
Trigger: ACAAGGATGGCTTCGTGTCTCTACAGGAGTGGATCAACGGGGGAATGACCACCATCCCTTTGCTGGTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 72 bp GGGATCCCATTCCAGGTACTGGGCAACGTGCAGCATTaGGCTCACAATCTGATCCATCTCCGCTTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GIPFQVLGNVQH*AHNLIHLRLVQ
Trigger: CTGGACCAAGCGGAGATGGATCAGATTGTGAGCCAAATGCTGCACGTTGCCCAGTACCTGGAATGGGATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 72 bp AGGAGGACCAGCAAAGGGATGGTGGTCATTCCCCCGTaGATCCACTCCTGTAGAGACACGAAGCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: RRTSKGMVVIPP*IHSCRDTKPSL
Trigger: CAAGGATGGCTTCGTGTCTCTACAGGAGTGGATCAACGGGGGAATGACCACCATCCCTTTGCTGGTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 72 bp ATCCAGGGCTCTCCGTCTACTTGCATCGGCAGAAGCTaGTTAGTCCTAATGGTGACAGAGGAGCACTGGGCC +
Preference number: 6 (lower is better)
Translates to: IQGSPSTCIGRS*LVLMVTEEHWA
Trigger: GGCCCAGTGCTCCTCTGTCACCATTAGGACTAACAAGCTTCTGCCGATGCAAGTAGACGGAGAGCCCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS CAA 90 bp GAGCTCTGTGGGATCCCATTCCAGGTACTGGGCAACGTGCAGCATTaGGCTCACAATCTGATCCATCTCCGCTTGGTCCAGGAGTCCATT +
Preference number: 6 (lower is better)
Translates to: ELCGIPFQVLGNVQH*AHNLIHLRLVQESI
Trigger: AATGGACTCCTGGACCAAGCGGAGATGGATCAGATTGTGAGCCAAATGCTGCACGTTGCCCAGTACCTGGAATGGGATCCCACAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 90 bp TCTGTGACGCTCTTCCTGCTTTCCCGGATCACAGCCCGGTTCTTCTaGGTTTCTCCCCAGAGATTGGTGCCTCCGTACATGCTGGGAATA +
Preference number: 6 (lower is better)
Translates to: SVTLFLLSRITARFF*VSPQRLVPPYMLGI
Trigger: TATTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAACCAAGAAGAACCGGGCTGTGATCCGGGAAAGCAGGAAGAGCGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS TCA 72 bp CTCCCTCTAGACCCACCACTTCAAGGAGCTGATCGCTaGGGTCTTGGACACAGCATTTCAGCTCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: LPLDPPLQGADR*GLGHSISAPLG
Trigger: ACCCAAAGGAGCTGAAATGCTGTGTCCAAGACCTCAGCGATCAGCTCCTTGAAGTGGTGGGTCTAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS CCA 72 bp ATCGCTGAGGTCTTGGACACAGCATTTCAGCTCCTTTaGGTCTGTGACGCTCTTCCTGCTTTCCCGGATCAC +
Preference number: 6 (lower is better)
Translates to: IAEVLDTAFQLL*VCDALPAFPDH
Trigger: GTGATCCGGGAAAGCAGGAAGAGCGTCACAGACCCAAAGGAGCTGAAATGCTGTGTCCAAGACCTCAGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS CAA 90 bp ACAGCGTTGGTGGACTGTATATTTACAGTAGATGCAGCACAGGCCTaGCTTCCCAACACCCATCAGCATGGCGCGGCAGAAGTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: TALVDCIFTVDAAQA*LPNTHQHGAAEVAV
Trigger: TACTGCAACTTCTGCCGCGCCATGCTGATGGGTGTTGGGAAGCAAGGCCTGTGCTGCATCTACTGTAAATATACAGTCCACCAACGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CAA 90 bp CTTTCCCGGATCACAGCCCGGTTCTTCTTGGTTTCTCCCCAGAGATaGGTGCCTCCGTACATGCTGGGAATATTAAGAATGGCGATGCCT +
Preference number: 6 (lower is better)
Translates to: LSRITARFFLVSPQR*VPPYMLGILRMAMP
Trigger: AGGCATCGCCATTCTTAATATTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAACCAAGAAGAACCGGGCTGTGATCCGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
CDS CCA 72 bp CCGAATTATAATCTGAGACATTGGGCTCACTACTGCTaGCCCCCTCCTTTGGATGGTCAGGTGTCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: PNYNLRHWAHYC*PPPLDGQVSLV
Trigger: GACAAGAGACACCTGACCATCCAAAGGAGGGGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CCA 72 bp CCACCCACGCATGCTGCATCACCTCGCCACTCCTTTTaGCTTTGGAGTTTGTTTTCACACATCCATGAATGG +
Preference number: 6 (lower is better)
Translates to: PPTHAASPRHSF*LWSLFSHIHEW
Trigger: CCATTCATGGATGTGTGAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGGTGATGCAGCATGCGTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000089925.10
CDS GCA 72 bp TGTGCTCAGTGGCTGAGGAAGGTCCACCTCCAGGTATaGCCTCATGAACAGCTTGAAGACATCATAGCTAAT +
Preference number: 6 (lower is better)
Translates to: CAQWLRKVHLQV*PHEQLEDIIAN
Trigger: ATTAGCTATGATGTCTTCAAGCTGTTCATGAGGGCATACCTGGAGGTGGACCTTCCTCAGCCACTGAGCACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 72 bp CTCATCTGCTTTGGCAGCATTATCCGAATTATAATCTaGGACATTGGGCTCACTACTGCTGGCCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LICFGSIIRIII*DIGLTTAGPLL
Trigger: AAGGAGGGGGCCAGCAGTAGTGAGCCCAATGTCTCAGATTATAATTCGGATAATGCTGCCAAAGCAGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS TCA 72 bp CCACCGTCGCACACTGTCGATAATTCACATTTGCGGTaGAACTCGCCACTCCTTTTGGCTTTGGAGTTTGTT +
Preference number: 6 (lower is better)
Translates to: PPSHTVDNSHLR*NSPLLLALEFV
Trigger: AACAAACTCCAAAGCCAAAAGGAGTGGCGAGTTTCACCGCAAATGTGAATTATCGACAGTGTGCGACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023578.14
CDS CCA 72 bp GAACAGCTTGAAGACATCATAGCTAATGGGCTTGTGTaGGTCATACTGCCTGAGGCTTCCACCTTCATTAAA +
Preference number: 6 (lower is better)
Translates to: EQLEDIIANGLV*VILPEASTFIK
Trigger: TTTAATGAAGGTGGAAGCCTCAGGCAGTATGACCCACACAAGCCCATTAGCTATGATGTCTTCAAGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CCA 72 bp TTGATTCAGTGTCTGGAGCACAGGCCTCATCTGCTTTaGCAGCATTATCCGAATTATAATCTGAGACATTGG +
Preference number: 6 (lower is better)
Translates to: LIQCLEHRPHLL*QHYPNYNLRHW
Trigger: CCAATGTCTCAGATTATAATTCGGATAATGCTGCCAAAGCAGATGAGGCCTGTGCTCCAGACACTGAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10
ENSMUST00000137311.2
CDS CCA 72 bp ATAATTCACATTTGCGGTGAAACTCGCCACTCCTTTTaGCTTTGGAGTTTGTTTTCACACATCCATGAATGG +
Preference number: 6 (lower is better)
Translates to: IIHICGETRHSF*LWSLFSHIHEW
Trigger: CCATTCATGGATGTGTGAAAACAAACTCCAAAGCCAAAAGGAGTGGCGAGTTTCACCGCAAATGTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023578.14
CDS CAA 72 bp AAGGTTTCCGAGGTACCAAATTCGAAATACCACAGCTaGTTCTTCATCCTGCTGTTGAATTTTTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: KVSEVPNSKYHS*FFILLLNFSGC
Trigger: ACACCCTGAAAAATTCAACAGCAGGATGAAGAACAAGCTGTGGTATTTCGAATTTGGTACCTCGGAAACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023578.14
ENSMUST00000089925.10