Pregenerated sensors for DGKA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025357Ensembl transcript IDs: ENSMUST00000026414.9, ENSMUST00000219834.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGCCGCACTGCCCAATGCCTGGTTGATCTCACATGTATCCCCATaGGGTCTCTTGGTGTCACCCCAGAGGTTGGAGCCACCGTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: LAALPNAWLISHVSP*GLLVSPQRLEPPCV Trigger: CACGCACGGTGGCTCCAACCTCTGGGGTGACACCAAGAGACCTCATGGGGATACATGTGAGATCAACCAGGCATTGGGCAGTGCGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 90 bp | AGAGGTTGGAGCCACCGTGCGTGCTCGGGATGTTCAATACCGCAATaGCTTCTAGGGATAGGTCGCTCAGATCCAGCAGCTTCCCGCATA | + |
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Preference number: 1 (lower is better) Translates to: RGWSHRACSGCSIPQ*LLGIGRSDPAASRI Trigger: TATGCGGGAAGCTGCTGGATCTGAGCGACCTATCCCTAGAAGGCATTGCGGTATTGAACATCCCGAGCACGCACGGTGGCTCCAACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 90 bp | TCTCACATGTATCCCCATGAGGTCTCTTGGTGTCACCCCAGAGGTTaGAGCCACCGTGCGTGCTCGGGATGTTCAATACCGCAATGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SHMYPHEVSWCHPRG*SHRACSGCSIPQCL Trigger: AAGGCATTGCGGTATTGAACATCCCGAGCACGCACGGTGGCTCCAACCTCTGGGGTGACACCAAGAGACCTCATGGGGATACATGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 90 bp | CACCAATATCCGGAACTGAGGAACATCTTTAAAGAATCTGAGCCCTaGCTCCGGACCATCCTTCAGGTCGAACACCTGCCGCGGGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: HQYPELRNIFKESEP*LRTILQVEHLPRVQ Trigger: CTGAACCCGCGGCAGGTGTTCGACCTGAAGGATGGTCCGGAGCCAGGGCTCAGATTCTTTAAAGATGTTCCTCAGTTCCGGATATTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 90 bp | TCTTGTGTTTGCACTCTTGTCCAGATACCAGGACGCTGGGGTAGATaGAACACGGAGGCAGGATATGATCACGGAGCAACCCACAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SCVCTLVQIPGRWGR*NTEAGYDHGATHSH Trigger: GTGACTGTGGGTTGCTCCGTGATCATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 90 bp | CATCTGTGGTCTTGTGTTTGCACTCTTGTCCAGATACCAGGACGCTaGGGTAGATGGAACACGGAGGCAGGATATGATCACGGAGCAACC | + |
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Preference number: 1 (lower is better) Translates to: HLWSCVCTLVQIPGR*GRWNTEAGYDHGAT Trigger: GGTTGCTCCGTGATCATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAGACCACAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 90 bp | GTGTCCAGCACTCTTGAGCCTGGTATAGATCTGGCCCATCTCAATTaGACCCTCTATTCCTACCACTTCCAGCCGCTTGTCACTCATGTC | + |
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Preference number: 1 (lower is better) Translates to: VSSTLEPGIDLAHLN*TLYSYHFQPLVTHV Trigger: GACATGAGTGACAAGCGGCTGGAAGTGGTAGGAATAGAGGGTGCAATTGAGATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 90 bp | GCAGCTTCCCGCATATCTCAACGGTTACAGACTCTTCCAGCTTTTTaGATGTTGAGAAGATGGACTCAGATGTGGCAAACTCAAAGTACC | + |
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Preference number: 1 (lower is better) Translates to: AASRISQRLQTLPAF*MLRRWTQMWQTQST Trigger: GGTACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGATATGCGGGAAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 90 bp | TTGCGTTGCTGGTTGTGTAAGGATGTCTGTATGGGAGCAGTGAGGTaGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LRCWLCKDVCMGAVR*QRIINTVKVMEHPS Trigger: AGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCTCCCATACAGACATCCTTACACAACCAGCAACGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| 3UTR TCA 90 bp | CCCGCATATCTCAACGGTTACAGACTCTTCCAGCTTTTTGCATGTTaGGAAGATGGACTCAGATGTGGCAAACTCAAAGTACCAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: PAYLNGYRLFQLFAC*EDGLRCGKLKVPKL Trigger: AAGCTTTGGTACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGATATGCGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCCGGACCATCCTTCAGGTCGAACACCTGCCGCGGGTTCAGAATGTACAACATCCCTCTGGGCTaGCTGGCAGGAAGGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGSGPSFRSNTCRGFRMYNIPLG*LAGRCG Trigger: GCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTT...GTACATTCTGAACCCGCGGCAGGTGTTCGACCTGAAGGATGGTCCGGAGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCCGGACCATCCTTCAGGTCGAACACCTGCCGCGGGTTCAGAATGTACGGACGCTGGGGTAGATaGAACACGGAGGCAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: PGSGPSFRSNTCRGFRMYGRWGR*NTEAGY Trigger: ATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCC...GTACATTCTGAACCCGCGGCAGGTGTTCGACCTGAAGGATGGTCCGGAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | CCAGTGCCCAGGGGCAGCACAGCAACGGGAGGCACAGTGGCAAAGTaGGCTTTGTCAATGGTCTCTAGAACCCAGCCTACTGTGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: PVPRGSTATGGTVAK*ALSMVSRTQPTVPS Trigger: AGATGGCACAGTAGGCTGGGTTCTAGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCTGCCCCTGGGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCCGCTTGTCACTCATGTCTGGCACACAGGTCTTCAGGATATCGGGGTCTTTCCAAAGCACACTCTaGCCCTGCTTGCCTCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSRLSLMSGTQVFRISGSFQSTL*PCLPPL Trigger: GAGCGGAGGCAAGCAGGGGCAGAGTGTGCTTTGGAA...AGACCCCGATATCCTGAAGACCTGTGTGCCAGACATGAGTGACAAGCGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | AGATACCAGGACGCTGGGGTAGATGGAACACGGAGGCAGGATATGATCACGGAGTCATGGATCTCCAGGTaGCACCACACACAGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RYQDAGVDGTRRQDMITESWISR*HHTQCS Trigger: ACTGCACTGTGTGTGGTGCCACCTGGAGATCCATGA...CTCCGTGATCATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTTGGCCAGCCGGTGTCCAGCACTCTTGAGCCTGGTATAGATCTGGCCCATCTGTGGTCTTGTGTTTaGACTCTTGTCCAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: ALGQPVSSTLEPGIDLAHLWSCV*TLVQIP Trigger: TGGTATCTGGACAAGAGTGCAAACACAAGACCACAG...ATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACACCGGCTGGCCAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | ATGTCTGGCACACAGGTCTTCAGGATATCGGGGTCTGTGATTATTTaGGCCGCACTGCCCAATGCCTGGTTGATCTCACATGTATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: MSGTQVFRISGSVII*AALPNAWLISHVSP Trigger: TGGGGATACATGTGAGATCAACCAGGCATTGGGCAGTGCGGCCAAAATAATCACAGACCCCGATATCCTGAAGACCTGTGTGCCAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCACAGCAACGGGAGGCACAGTGGCAAAGTTGGCTTTGTCAATGGTCTCTTGTTCCTTGTTGCGTTaGTGGTTGTGTAAGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: GSTATGGTVAKLALSMVSCSLLR*WLCKDV Trigger: GACATCCTTACACAACCAGCAACGCAACAAGGAACA...AGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR GCA 90 bp | GCACAGCAACGGGAGGCACAGTGGCAAAGTTGGCTTTGTCAATGGTCTCTAGAAGAAAAGCCTCAGGGGTaGACAGGCTTGTATCATCTG | + |
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Preference number: 2 (lower is better) Translates to: AQQREAQWQSWLCQWSLEEKPQG*TGLYHL Trigger: CAGATGATACAAGCCTGTGCACCCCTGAGGCTTTTC...TTCTAGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCCGCTTGTCACTCATGTCTGGCACACAGGTCTTCAGGATATCGGGGTCTTGCATGTTGAGAAGATaGACTCAGATGTGGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSRLSLMSGTQVFRISGSCMLRR*TQMWQT Trigger: AGTTTGCCACATCTGAGTCCATCTTCTCAACATGCA...AGACCCCGATATCCTGAAGACCTGTGTGCCAGACATGAGTGACAAGCGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | AATTTCCAAAGCACACTCTGCCCCTGCTTGCCTCCGCTCTTAAGATaGATGAAGACTAGAAGGGGGTGGGTGTTAGAAACGGGTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: NFQSTLCPCLPPLLR*MKTRRGWVLETGSI Trigger: GATTGAACCCGTTTCTAACACCCACCCCCTTCTAGTCTTCATCAATCTTAAGAGCGGAGGCAAGCAGGGGCAGAGTGTGCTTTGGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGACTCTTCCAGCTTTTTGCATGTTGAGAAGATGGACTCAGATGTGGCAACAGATACCAGGACGCTaGGGTAGATGGAACACGGAG | + |
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Preference number: 2 (lower is better) Translates to: LQTLPAFCMLRRWTQMWQQIPGR*GRWNTE Trigger: CTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTG...TTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGATGGAACATCCCTCTaGGCTGGCTGGCAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKDGTSL*AGWQEG Trigger: ACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | AGCAGCTTCCCGCATATCTCAACGGTTACAGACTCTTCCAGCTTTTaGCATGTTGAGAAGATGGACTCAGATGTGGCAAACTCAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSFPHISTVTDSSSF*HVEKMDSDVANSKY Trigger: GTACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGATATGCGGGAAGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTTACTTAGCTCTATATCCTTGAGAATCTTTCTCAAATTCTCACCTTCACACGGAGGCAGGATATaGTCACGGAGCAACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: TTLLSSISLRIFLKFSPSHGGRI*SRSNPQ Trigger: CTGTGGGTTGCTCCGTGATCATATCCTGCCTCCGTG...TGAAGGTGAGAATTTGAGAAAGATTCTCAAGGATATAGAGCTAAGTAAGGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | TCCCGCATATCTCAACGGTTACAGACTCTTCCAGCTTTTTGCATGTaGAGAAGATGGACTCAGATGTGGCAAACTCAAAGTACCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SRISQRLQTLPAFCM*RRWTQMWQTQSTKA Trigger: AGCTTTGGTACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGATATGCGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CAA 90 bp | GTTATTGATGATTTGAGAGGGAACTGGATCACTCTTTTCTCCATTTaGTTGGGGAATCACTTCCAGGAACCATCGGTCGAGATATACCAC | + |
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Preference number: 2 (lower is better) Translates to: VIDDLRGNWITLFSI*LGNHFQEPSVEIYH Trigger: GTGGTATATCTCGACCGATGGTTCCTGGAAGTGATTCCCCAACAAAATGGAGAAAAGAGTGATCCAGTTCCCTCTCAAATCATCAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAATGGCACCACACACAGTaGAGTCCTGTTAGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FKSVCRGVRVMEKVTLLEWHHTQ*SPVRLW Trigger: CCACAGCCTAACAGGACTGCACTGTGTGTGGTGCCA...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGACTCTTCCAGCTTTTTGCATGTTGAGAAGATGGACTCAGATGTGGCAAATGGGAGCAGTGAGGTaGCAGAGGATAATAAATACT | + |
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Preference number: 2 (lower is better) Translates to: LQTLPAFCMLRRWTQMWQMGAVR*QRIINT Trigger: AGTATTTATTATCCTCTGCCACCTCACTGCTCCCAT...TTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 72 bp | CGGAGCAACCCACAGTCACACTCAGGACCTACAGCCTaGAGACAGTCATCATGGATCTCCAGGTGGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: RSNPQSHSGPTA*RQSSWISRWHH Trigger: GTGGTGCCACCTGGAGATCCATGATGACTGTCTGCAGGCTGTAGGTCCTGAGTGTGACTGTGGGTTGCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | CAGTGCCCAGGGGCAGCACAGCAACGGGAGGCACAGTaGCAAAGTTGGCTTTGTCAATGGTCTCTAGAACCC | + |
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Preference number: 3 (lower is better) Translates to: QCPGAAQQREAQ*QSWLCQWSLEP Trigger: GGGTTCTAGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCTGCCCCTGGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | TATCCCCATGAGGTCTCTTGGTGTCACCCCAGAGGTTaGAGCCACCGTGCGTGCTCGGGATGTTCAATACCG | + |
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Preference number: 3 (lower is better) Translates to: YPHEVSWCHPRG*SHRACSGCSIP Trigger: CGGTATTGAACATCCCGAGCACGCACGGTGGCTCCAACCTCTGGGGTGACACCAAGAGACCTCATGGGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR TCA 72 bp | TCTCGGAGCACTTGGCCAGCCGGTGTCCAGCACTCTTaGGCCTGGTATAGATCTGGCCCATCTCAATTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SRSTWPAGVQHS*AWYRSGPSQLH Trigger: GTGCAATTGAGATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACACCGGCTGGCCAAGTGCTCCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 72 bp | AGCCACCGTGCGTGCTCGGGATGTTCAATACCGCAATaGCTTCTAGGGATAGGTCGCTCAGATCCAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SHRACSGCSIPQ*LLGIGRSDPAA Trigger: AGCTGCTGGATCTGAGCGACCTATCCCTAGAAGGCATTGCGGTATTGAACATCCCGAGCACGCACGGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | CCTACAGCCTGCAGACAGTCATCATGGATCTCCAGGTaGCACCACACACAGTGCAGTCCTGTTAGGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PTACRQSSWISR*HHTQCSPVRLW Trigger: CCACAGCCTAACAGGACTGCACTGTGTGTGGTGCCACCTGGAGATCCATGATGACTGTCTGCAGGCTGTAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR TCA 72 bp | CTGCCCAATGCCTGGTTGATCTCACATGTATCCCCATaGGGTCTCTTGGTGTCACCCCAGAGGTTGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LPNAWLISHVSP*GLLVSPQRLEP Trigger: TGGCTCCAACCTCTGGGGTGACACCAAGAGACCTCATGGGGATACATGTGAGATCAACCAGGCATTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | TGCACTCTTGTCCAGATACCAGGACGCTGGGGTAGATaGAACACGGAGGCAGGATATGATCACGGAGCAACC | + |
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Preference number: 3 (lower is better) Translates to: CTLVQIPGRWGR*NTEAGYDHGAT Trigger: GGTTGCTCCGTGATCATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTGGACAAGAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | CCGGAACTGAGGAACATCTTTAAAGAATCTGAGCCCTaGCTCCGGACCATCCTTCAGGTCGAACACCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: PELRNIFKESEP*LRTILQVEHLP Trigger: CGGCAGGTGTTCGACCTGAAGGATGGTCCGGAGCCAGGGCTCAGATTCTTTAAAGATGTTCCTCAGTTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CAA 90 bp | GCACTTGGCCAGCCGGTGTCCAGCACTCTTGAGCCTGGTATAGATCTGGCCCATTCTGTGGTCTTGTGTTaGCACTCTTGTCCAGATACC | + |
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Preference number: 3 (lower is better) Translates to: ALGQPVSSTLEPGIDLAHSVVLC*HSCPDT Trigger: GGTATCTGGACAAGAGTGCAAACACAAGACCACAGA...ATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACACCGGCTGGCCAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCCAGCCGGTGTCCAGCACTCTTGAGCCTGGTATAGATCTGGCCCATCTCGTATCATCTGTGGTCTaGTGTTTGCACTCTTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LGQPVSSTLEPGIDLAHLVSSVV*CLHSCP Trigger: TGGACAAGAGTGCAAACACAAGACCACAGATGATAC...GAGATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACACCGGCTGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 72 bp | GGGTGCACAGGCTTGTATCATCTGTGGTCTTGTGTTTaGACTCTTGTCCAGATACCAGGACGCTGGGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GCTGLYHLWSCV*TLVQIPGRWGR Trigger: TCTACCCCAGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAGACCACAGATGATACAAGCCTGTGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 72 bp | ACTCTTGAGCCTGGTATAGATCTGGCCCATCTCAATTaGACCCTCTATTCCTACCACTTCCAGCCGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: TLEPGIDLAHLN*TLYSYHFQPLV Trigger: GACAAGCGGCTGGAAGTGGTAGGAATAGAGGGTGCAATTGAGATGGGCCAGATCTATACCAGGCTCAAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | TCTTGTGTTTGCACTCTTGTCCAGATACCAGGACGCTaGGGTAGATGGAACACGGAGGCAGGATATGATCAC | + |
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Preference number: 3 (lower is better) Translates to: SCVCTLVQIPGR*GRWNTEAGYDH Trigger: GTGATCATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | GAAAAGCCTCAGGGGTGCACAGGCTTGTATCATCTGTaGTCTTGTGTTTGCACTCTTGTCCAGATACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: EKPQGCTGLYHL*SCVCTLVQIPG Trigger: TCCTGGTATCTGGACAAGAGTGCAAACACAAGACCACAGATGATACAAGCCTGTGCACCCCTGAGGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR CCA 72 bp | GAAGGTGGACCCATAAGCATAGGCATCTGGTTCTTATaGGTGATCTTGATTGTACAGGGTGCCTGCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: EGGPISIGIWFL*VILIVQGACIQ Trigger: CTGGATGCAGGCACCCTGTACAATCAAGATCACCCATAAGAACCAGATGCCTATGCTTATGGGTCCACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCACACAGGTCTTCAGGATATCGGGGTCTGTGATTATTTTGGCCGCACTGCCGTAGTTATTGATGATTaGAGAGGGAACTGGATCACT | + |
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Preference number: 3 (lower is better) Translates to: WHTGLQDIGVCDYFGRTAVVIDD*RGNWIT Trigger: AGTGATCCAGTTCCCTCTCAAATCATCAATAACTAC...GGCAGTGCGGCCAAAATAATCACAGACCCCGATATCCTGAAGACCTGTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTAGGAGTTGGAAGGTGGACCCATAAGCATAGGCATCTGGTTCTTATGGGTCCAGCTTTTTGCATGTaGAGAAGATGGACTCAGATG | + |
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Preference number: 3 (lower is better) Translates to: IVGVGRWTHKHRHLVLMGPAFCM*RRWTQM Trigger: CATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGG...ACCCATAAGAACCAGATGCCTATGCTTATGGGTCCACCTTCCAACTCCTACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| 3UTR GCA 72 bp | CGCATATCTCAACGGTTACAGACTCTTCCAGCTTTTTaGATGTTGAGAAGATGGACTCAGATGTGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RISQRLQTLPAF*MLRRWTQMWQT Trigger: AGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGATATGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| 3UTR CCA 72 bp | TGGTTGTGTAAGGATGTCTGTATGGGAGCAGTGAGGTaGCAGAGGATAATAAATACTGTGAAGGTGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WLCKDVCMGAVR*QRIINTVKVME Trigger: TTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCTCCCATACAGACATCCTTACACAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| 3UTR TCA 72 bp | CTCAACGGTTACAGACTCTTCCAGCTTTTTGCATGTTaGGAAGATGGACTCAGATGTGGCAAACTCAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LNGYRLFQLFAC*EDGLRCGKLKV Trigger: TACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR CCA 90 bp | GATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTGTCACCCCAGAGGTTaGAGCCACCGTGCGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DGTSLWAGWQEGVAASRQCHPRG*SHRACS Trigger: CGAGCACGCACGGTGGCTCCAACCTCTGGGGTGACA...CTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | GATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGGTCCGGATCTTTTTCTaGCAGCGGTCACAACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DGTSLWAGWQEGVAASRQVRIFF*QRSQRP Trigger: CGGGCGTTGTGACCGCTGCCAGAAAAAGATCCGGAC...CTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGAGCCCAGCATAGGTaGTGGGGAACCTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VMEHPSGLAGRKVWQHLDRAQHR*WGTSSI Trigger: AATGGAGGAGGTTCCCCATCACCTATGCTGGGCTCT...GTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCAGCCGGTGTCCAGCACTCTTGAGCCTGGTATAGATCTGGCCCATCTCAGAGCCCAGCATAGGTaGTGGGGAACCTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LGQPVSSTLEPGIDLAHLRAQHR*WGTSSI Trigger: AATGGAGGAGGTTCCCCATCACCTATGCTGGGCTCT...GAGATGGGCCAGATCTATACCAGGCTCAAGAGTGCTGGACACCGGCTGGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | GATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGGAGCCACTGCCGTCCTaGTCCATCTCTCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: DGTSLWAGWQEGVAASRQEPLPS*SISLII Trigger: GATGATGAGAGAGATGGATCAGGACGGCAGTGGCTC...CTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | GATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGACTTGGCATAGGTGCTaGCTTCACAAGGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGTSLWAGWQEGVAASRQTWHRC*LHKAGP Trigger: AGGCCCAGCCTTGTGAAGTCAGCACCTATGCCAAGT...CTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTGAGACACAGAGCCACTaGCGTCCTGATCCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGDGTSLWAGWQEGVAASETQSH*RPDPSL Trigger: GAGAGATGGATCAGGACGGCAGTGGCTCTGTGTCTC...AGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR GCA 90 bp | GTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACCCAGATCATTTCCAGTaGCCAGGGGCAGCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMEHPSGLAGRKVWQHLDPDHFQ*PGAAQQ Trigger: TTGCTGTGCTGCCCCTGGGCACTGGAAATGATCTGG...GTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCGCTTGTCACTCATGTCTGGCACACAGGTCTTCAGGATATCGGGGTCTCAGGAGCACAAGCAGTaGCACTGTGGTAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLSLMSGTQVFRISGSQEHKQ*HCGSPS Trigger: GCTGGGGCTACCACAGTGCCACTGCTTGTGCTCCTG...AGACCCCGATATCCTGAAGACCTGTGTGCCAGACATGAGTGACAAGCGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGTCACAACGCCCGGAATaGCAGCCTCCTCGAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWSQRPE*QPPRTH Trigger: ATGGGTTCGAGGAGGCTGTCATTCCGGGCGTTGTGA...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTGAGACACAGAGCCACTaGCGTCCTGATCCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MEHPSGLAGRKVWQHLDSETQSH*RPDPSL Trigger: GAGAGATGGATCAGGACGGCAGTGGCTCTGTGTCTC...ACTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAAGGTTGGAGCCACCGTaGGTGCTCGGGATGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVMEHPSGLAGRKVWQHLRLEPP*VLGMFN Trigger: ATTGAACATCCCGAGCACGCACGGTGGCTCCAACCT...TAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGGCCGCACTGCCCAATaGCTGGTTGATCTCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: KVMEHPSGLAGRKVWQHLGRTAQ*LVDLTC Trigger: ACATGTGAGATCAACCAGGCATTGGGCAGTGCGGCC...TAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTGGACGCTGGGGTAGATaGAACACGGAGGCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: MEHPSGLAGRKVWQHLDSGRWGR*NTEAGY Trigger: ATATCCTGCCTCCGTGTTCCATCTACCCCAGCGTCC...ACTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCCCCATGAGGTCTCTTaGTGTCACCCCAGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWPHEVS*CHPRGW Trigger: CCAACCTCTGGGGTGACACCAAGAGACCTCATGGGG...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGCCCATCTCAATTGCACCCTCTATTCCTACCACTTCCAGCCGCTTGTCACTCACAACGCCCGGAATaGCAGCCTCCTCGAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSQLHPLFLPLPAACHSQRPE*QPPRTH Trigger: ATGGGTTCGAGGAGGCTGTCATTCCGGGCGTTGTGA...GTGACAAGCGGCTGGAAGTGGTAGGAATAGAGGGTGCAATTGAGATGGGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTTGCAGACAGTCATCATaGATCTCCAGGTGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MEHPSGLAGRKVWQHLDSCRQSS*ISRWHH Trigger: GTGGTGCCACCTGGAGATCCATGATGACTGTCTGCA...ACTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTCAACGGGAGGCACAGTaGCAAAGTTGGCTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGDGTSLWAGWQEGVAASQREAQ*QSWLCQ Trigger: TTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTG...AGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTACTGGCCCATCTCAATTaGACCCTCTATTCCTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVMEHPSGLAGRKVWQHLLAHLN*TLYSYH Trigger: GTGGTAGGAATAGAGGGTGCAATTGAGATGGGCCAG...TAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| 3UTR CAA 72 bp | GCCTCAGGGGTGCACAGGCTTGTATCATCTGTGGTCTaGTGTTTGCACTCTTGTCCAGATACCAGGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGVHRLVSSVV*CLHSCPDTRTL Trigger: CAGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAGACCACAGATGATACAAGCCTGTGCACCCCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| 3UTR CAA 72 bp | AGCACAGCAACGGGAGGCACAGTGGCAAAGTTGGCTTaGTCAATGGTCTCTAGAACCCAGCCTACTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STATGGTVAKLA*SMVSRTQPTVP Trigger: TGGCACAGTAGGCTGGGTTCTAGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCGCTTGTCACTCATGTCTGGCACACAGGTCTTCAGGATATCGGGGTCTGATCACATTGGCTTTTaGCTTGGTCTTCTCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLSLMSGTQVFRISGSDHIGF*LGLLSR Trigger: GCGGCTGAGAAGACCAAGTCAAAAGCCAATGTGATC...AGACCCCGATATCCTGAAGACCTGTGTGCCAGACATGAGTGACAAGCGGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCACAGCAACGGGAGGCACAGTGGCAAAGTTGGCTTTGTCAATGGTCTCTTCTCTCATCATCTCCTaGAGGATCGGTCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSTATGGTVAKLALSMVSSLIIS*RIGLSS Trigger: TGAGCTGAGACCGATCCTTCAGGAGATGATGAGAGA...AGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTCTGTGGTCTTGTGTTTaGACTCTTGTCCAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGDGTSLWAGWQEGVAASLWSCV*TLVQIP Trigger: TGGTATCTGGACAAGAGTGCAAACACAAGACCACAG...AGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR GCA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGGAAAAGCCTCAGGGGTaGACAGGCTTGTATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWEKPQG*TGLYHL Trigger: CAGATGATACAAGCCTGTGCACCCCTGAGGCTTTTC...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | GATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAACAGGAGCACAAGCAGTaGCACTGTGGTAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DNKYCEGDGTSLWAGWQEQEHKQ*HCGSPS Trigger: GCTGGGGCTACCACAGTGCCACTGCTTGTGCTCCTG...TTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | GTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACCAGCTTTTTGCATGTTaGGAAGATGGACTCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VMEHPSGLAGRKVWQHLDQLFAC*EDGLRC Trigger: ACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTG...GTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGATCCTAGGTACCCAATaGCATCTCCCTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWILGTQ*HLPGKI Trigger: GATTTTGCCAGGGAGATGCCATTGGGTACCTAGGAT...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTATGGCACAGTGGTCATaGACAATGTACTTACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MEHPSGLAGRKVWQHLDSMAQWS*TMYLQK Trigger: CTTCTGTAAGTACATTGTTCATGACCACTGTGCCAT...ACTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCACAGCAACGGGAGGCACAGTGGCAAAGTTGGCTTTGTCAATGGTCTCTCCAATGGCATCTCCCTaGCAAAATCTGTTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSTATGGTVAKLALSMVSPMASP*QNLFIS Trigger: TGAGATGAACAGATTTTGCCAGGGAGATGCCATTGG...AGAGACCATTGACAAAGCCAACTTTGCCACTGTGCCTCCCGTTGCTGTGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR CCA 90 bp | GATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAACAGATACCAGGACGCTaGGGTAGATGGAACACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNKYCEGDGTSLWAGWQEQIPGR*GRWNTE Trigger: CTCCGTGTTCCATCTACCCCAGCGTCCTGGTATCTG...TTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTGGCATCTGGTTCTTATaGGTGATCTTGATTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MEHPSGLAGRKVWQHLDSGIWFL*VILIVQ Trigger: CTGTACAATCAAGATCACCCATAAGAACCAGATGCC...ACTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| 3UTR CAA 72 bp | CGGGTTCAATCCGAAAAGCCTCAGGGGTGCACAGGCTaGTATCATCTGTGGTCTTGTGTTTGCACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVQSEKPQGCTG*YHLWSCVCTLV Trigger: GACAAGAGTGCAAACACAAGACCACAGATGATACAAGCCTGTGCACCCCTGAGGCTTTTCGGATTGAACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCGAGCCACTGCCGTCCTaGTCCATCTCTCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLEPLPS*SISLII Trigger: GATGATGAGAGAGATGGATCAGGACGGCAGTGGCTC...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | GATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAATTGTGGTCTGGAATGTaGTCTCGGAGCACTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DNKYCEGDGTSLWAGWQELWSGM*SRSTWP Trigger: TGGCCAAGTGCTCCGAGATCACATTCCAGACCACAA...TTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTTAGAAACGGGTTCAATCCGAAAAGCCTCAGGGGTGCACAGGCTTGTATCATCCTAGGTACCCAATaGCATCTCCCTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GVRNGFNPKSLRGAQACIILGTQ*HLPGKI Trigger: GATTTTGCCAGGGAGATGCCATTGGGTACCTAGGAT...GATACAAGCCTGTGCACCCCTGAGGCTTTTCGGATTGAACCCGTTTCTAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| 3UTR CAA 72 bp | ACACAGGTCTTCAGGATATCGGGGTCTGTGATTATTTaGGCCGCACTGCCCAATGCCTGGTTGATCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TQVFRISGSVII*AALPNAWLISH Trigger: ATGTGAGATCAACCAGGCATTGGGCAGTGCGGCCAAAATAATCACAGACCCCGATATCCTGAAGACCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTCATGGATCTCCAGGTaGCACCACACACAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLSWISR*HHTQCS Trigger: ACTGCACTGTGTGTGGTGCCACCTGGAGATCCATGA...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGCCCCGTCAATTTGCATaGGGAGGGTTTTTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWQRIINTVKVMEHPSGLPRQFA*GGFLWS Trigger: AGACCACAAAAACCCTCCCCATGCAAATTGACGGGG...CAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGATAAGCATAGGCATCTaGTTCTTATGGGTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWISIGI*FLWVIL Trigger: CAAGATCACCCATAAGAACCAGATGCCTATGCTTAT...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CCA 90 bp | AGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGCATTGGCTTTTGACTTaGTCTTCTCAGCCGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIINTVKVMEHPSGLAGRHWLLT*SSQPQL Trigger: AAGTTGCGGCTGAGAAGACCAAGTCAAAAGCCAATG...CCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAACACGGAGGCAGGATATaGTCACGGAGCAACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKHGGRI*SRSNPQ Trigger: CTGTGGGTTGCTCCGTGATCATATCCTGCCTCCGTG...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| 3UTR CAA 72 bp | GATTTGAGAGGGAACTGGATCACTCTTTTCTCCATTTaGTTGGGGAATCACTTCCAGGAACCATCGGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLRGNWITLFSI*LGNHFQEPSVE Trigger: CTCGACCGATGGTTCCTGGAAGTGATTCCCCAACAAAATGGAGAAAAGAGTGATCCAGTTCCCTCTCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| CDS-3UTR TCA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCAGCAGTACACATCACTaGGACAGATCACATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLSSTHH*DRSHWL Trigger: AAGCCAATGTGATCTGTCTCAGTGATGTGTACTGCT...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR GCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAATGGCACCACACACAGTaGAGTCCTGTTAGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKWHHTQ*SPVRLW Trigger: CCACAGCCTAACAGGACTGCACTGTGTGTGGTGCCA...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CCA 90 bp | AGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGTTTTCTCCATTTTGTTaGGGAATCACTTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RIINTVKVMEHPSGLAGRFSPFC*GITSRN Trigger: GTTCCTGGAAGTGATTCCCCAACAAAATGGAGAAAA...CCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR GCA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAATTCCAAAGCACACTCTaGCCCTGCTTGCCTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSVCRGVRVMEKVTLLEFQSTL*PCLPPL Trigger: GAGCGGAGGCAAGCAGGGGCAGAGTGTGCTTTGGAA...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| 3UTR CAA 72 bp | TCTCAACGGTTACAGACTCTTCCAGCTTTTTGCATGTaGAGAAGATGGACTCAGATGTGGCAAACTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRLQTLPAFCM*RRWTQMWQTQS Trigger: ACTTTGAGTTTGCCACATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGTCTGTAACCGTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| CDS-3UTR TCA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAAGATCACATTGGCTTTTaGCTTGGTCTTCTCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSVCRGVRVMEKVTLLEDHIGF*LGLLSR Trigger: GCGGCTGAGAAGACCAAGTCAAAAGCCAATGTGATC...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR TCA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAATCTCTCATCATCTCCTaGAGGATCGGTCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSVCRGVRVMEKVTLLESLIIS*RIGLSS Trigger: TGAGCTGAGACCGATCCTTCAGGAGATGATGAGAGA...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAACCAATGGCATCTCCCTaGCAAAATCTGTTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKPMASP*QNLFIS Trigger: TGAGATGAACAGATTTTGCCAGGGAGATGCCATTGG...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CCA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAAAAGGCTGGGCCTTCATaGCACAGTGGTCATGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FKSVCRGVRVMEKVTLLEKAGPS*HSGHEQ Trigger: TTGTTCATGACCACTGTGCCATGAAGGCCCAGCCTT...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAATGCATGTTGAGAAGATaGACTCAGATGTGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKCMLRR*TQMWQT Trigger: AGTTTGCCACATCTGAGTCCATCTTCTCAACATGCA...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR GCA 90 bp | TTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAACTCTTCCAGCTTTTTaGATGTTGAGAAGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FVLSAFKSVCRGVRVMEKTLPAF*MLRRWT Trigger: AGTCCATCTTCTCAACATGCAAAAAGCTGGAAGAGT...TTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | GAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTACCACTTCCAGCCGCTaGTCACTCATGTCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: EGDGTSLWAGWQEGVAASTTSSR*SLMSGT Trigger: TGTGCCAGACATGAGTGACAAGCGGCTGGAAGTGGT...AGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | GAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTCTTGTGTTTGCACTCTaGTCCAGATACCAGGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGDGTSLWAGWQEGVAASLVFAL*SRYQDA Trigger: AGCGTCCTGGTATCTGGACAAGAGTGCAAACACAAG...AGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | GATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACAGTCTGTGGTCTTGTGTTaGCACTCTTGTCCAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: DGTSLWAGWQEGVAASRQSVVLC*HSCPDT Trigger: GGTATCTGGACAAGAGTGCAAACACAAGACCACAGA...CTGTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCGTGTCACCCCAGAGGTaGGAGCCACCGTGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLVSPQR*EPPCVL Trigger: GAGCACGCACGGTGGCTCCAACCTCTGGGGTGACAC...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CAA 90 bp | AAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTATCTGGCCCATCTCAATaGCACCCTCTATTCCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: KVMEHPSGLAGRKVWQHLSGPSQ*HPLFLP Trigger: TGGTAGGAATAGAGGGTGCAATTGAGATGGGCCAGA...TAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS-3UTR CAA 90 bp | GTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACACATCGCTGACCCTTTaGGTGGAGTATTCTATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VMEHPSGLAGRKVWQHLDTSLTL*VEYSMY Trigger: GTACATAGAATACTCCACCAAAAGGGTCAGCGATGT...GTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | GTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCAGCATCTAGACGTATCATCTGTGGTCTaGTGTTTGCACTCTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VMEHPSGLAGRKVWQHLDVSSVV*CLHSCP Trigger: TGGACAAGAGTGCAAACACAAGACCACAGATGATAC...GTCTAGATGCTGCCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS TCA 90 bp | AGTGTGACTGGACACCAATGTCTTTCCGAGACTTGGCATAGGTGCTaGCTTCACAAGGCTGGGCCTTCATGGCACAGTGGTCATGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SVTGHQCLSETWHRC*LHKAGPSWHSGHEQ Trigger: TTGTTCATGACCACTGTGCCATGAAGGCCCAGCCTTGTGAAGTCAGCACCTATGCCAAGTCTCGGAAAGACATTGGTGTCCAGTCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | AATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGGTGTGGCTGAGACAGATCACATaGGCTTTTGACTTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTVKVMEHPSGLAGRKVWLRQIT*AFDLVF Trigger: GAAGACCAAGTCAAAAGCCAATGTGATCTGTCTCAG...CCACACCTTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | AGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGACATTGGCTTTTGACTaGGTCTTCTCAGCCGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RIINTVKVMEHPSGLAGRTLAFD*VFSAAT Trigger: AGTTGCGGCTGAGAAGACCAAGTCAAAAGCCAATGT...CCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | AGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAGTCTGGTGAATCTCTaGGGTCTCCATATATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RIINTVKVMEHPSGLAGRSLVNL*GLHIWL Trigger: CAACCATATATGGAGACCCAAGAGATTCACCAGACT...CCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCAGATCACATTGGCTTTaGACTTGGTCTTCTCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLRSHWL*TWSSQP Trigger: CGGCTGAGAAGACCAAGTCAAAAGCCAATGTGATCT...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | AGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGACTCTTTTCTCCATTTaGTTGGGGAATCACTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIINTVKVMEHPSGLAGRTLFSI*LGNHFQ Trigger: CTGGAAGTGATTCCCCAACAAAATGGAGAAAAGAGT...CCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS-3UTR CAA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCACATCGCTGACCCTTTaGGTGGAGTATTCTATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLTSLTL*VEYSMY Trigger: GTACATAGAATACTCCACCAAAAGGGTCAGCGATGT...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | AGCAGTGAGGTGGCAGAGGATAATAAATACTGTGAAGGTGATGGAACATCCCTCCTGAGACAGATCACATaGGCTTTTGACTTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEVAEDNKYCEGDGTSLLRQIT*AFDLVF Trigger: GAAGACCAAGTCAAAAGCCAATGTGATCTGTCTCAG...GAGGGATGTTCCATCACCTTCACAGTATTTATTATCCTCTGCCACCTCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | ATTGTAGGAGTTGGAAGGTGGACCCATAAGCATAGGCATCTGGTTCTTATGGGTAGTCTGGTGAATCTCTaGGGTCTCCATATATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IVGVGRWTHKHRHLVLMGSLVNL*GLHIWL Trigger: CAACCATATATGGAGACCCAAGAGATTCACCAGACT...ACCCATAAGAACCAGATGCCTATGCTTATGGGTCCACCTTCCAACTCCTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | GATAATAAATACTGTGAAGGTGATGGAACATCCCTCTGGGCTGGCTGGCAGGAAGTAGTTATTGATGATTaGAGAGGGAACTGGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: DNKYCEGDGTSLWAGWQEVVIDD*RGNWIT Trigger: AGTGATCCAGTTCCCTCTCAAATCATCAATAACTAC...TTCCTGCCAGCCAGCCCAGAGGGATGTTCCATCACCTTCACAGTATTTATTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS CCA 90 bp | ATTTTCATGAATTGTTCAAATCCTAGGTACCCAATGGCATCTCCCTaGCAAAATCTGTTCATCTCACCATCGTCAAAGACCTTCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: IFMNCSNPRYPMASP*QNLFISPSSKTFST Trigger: TGTACTGAAGGTCTTTGACGATGGTGAGATGAACAGATTTTGCCAGGGAGATGCCATTGGGTACCTAGGATTTGAACAATTCATGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS-3UTR CAA 90 bp | ACCACCTTACTTAGCTCTATATCCTTGAGAATCTTTCTCAAATTCTCACCTTCAACATTGGCTTTTGACTaGGTCTTCTCAGCCGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TTLLSSISLRIFLKFSPSTLAFD*VFSAAT Trigger: AGTTGCGGCTGAGAAGACCAAGTCAAAAGCCAATGT...TGAAGGTGAGAATTTGAGAAAGATTCTCAAGGATATAGAGCTAAGTAAGGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAAAGTCACTTTATTAGAACCAGCTTTTTGCATGTaGAGAAGATGGACTCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FKSVCRGVRVMEKVTLLEPAFCM*RRWTQM Trigger: CATCTGAGTCCATCTTCTCAACATGCAAAAAGCTGG...TTCTAATAAAGTGACTTTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS TCA 72 bp | CGGATCTTTTTCTGGCAGCGGTCACAACGCCCGGAATaGCAGCCTCCTCGAACCCATAAGTGTGACTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RIFFWQRSQRPE*QPPRTHKCDWT Trigger: TGTCCAGTCACACTTATGGGTTCGAGGAGGCTGTCATTCCGGGCGTTGTGACCGCTGCCAGAAAAAGATCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
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| CDS GCA 72 bp | CAGCACGGACCCACTCGTCTAGAGACACAGAGCCACTaGCGTCCTGATCCATCTCTCTCATCATCTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QHGPTRLETQSH*RPDPSLSSSPE Trigger: TTCAGGAGATGATGAGAGAGATGGATCAGGACGGCAGTGGCTCTGTGTCTCTAGACGAGTGGGTCCGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS CAA 72 bp | ATAAGTGTGACTGGACAGTTACAGCTCAGGCCCTGTTaGCCAAGGCTAATGCTCTGTTCGCACAGGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVTGQLQLRPC*PRLMLCSHRLQ Trigger: CTGCAACCTGTGCGAACAGAGCATTAGCCTTGGCAAACAGGGCCTGAGCTGTAACTGTCCAGTCACACTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219834.2 |
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| CDS TCA 72 bp | ACTTCACAAGGCTGGGCCTTCATGGCACAGTGGTCATaGACAATGTACTTACAGAAGTTACAGCTCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSQGWAFMAQWS*TMYLQKLQLRP Trigger: GGGCCTGAGCTGTAACTTCTGTAAGTACATTGTTCATGACCACTGTGCCATGAAGGCCCAGCCTTGTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS TCA 72 bp | TGCTCTGTTCGCACAGGTTGCAGTAGACCAGTCTGGTaGATCTCTTGGGTCTCCATATATGGTTGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSVRTGCSRPVW*ISWVSIYGCHH Trigger: ATGATGGCAACCATATATGGAGACCCAAGAGATTCACCAGACTGGTCTACTGCAACCTGTGCGAACAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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| CDS CAA 72 bp | CTATCCAGGATCCCATTTCTGTCCATGTCATATAGCTaGAAGGTGAACTCTAGCTTGTCTTCTGGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRIPFLSMSYS*KVNSSLSSGRP Trigger: TGGCCGGCCAGAAGACAAGCTAGAGTTCACCTTCAAGCTATATGACATGGACAGAAATGGGATCCTGGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS CAA 72 bp | ACCAGTCTGGTGAATCTCTTGGGTCTCCATATATGGTaGCCATCATCTTTCATAGTCACGTCCATCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSLVNLLGLHIW*PSSFIVTSIPR Trigger: CCTGGGGATGGACGTGACTATGAAAGATGATGGCAACCATATATGGAGACCCAAGAGATTCACCAGACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS CAA 72 bp | ACAATGTACTTACAGAAGTTACAGCTCAGGCCCTGTTaGCCAAGGCTAATGCTCTGTTCGCACAGGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TMYLQKLQLRPC*PRLMLCSHRLQ Trigger: CTGCAACCTGTGCGAACAGAGCATTAGCCTTGGCAAACAGGGCCTGAGCTGTAACTTCTGTAAGTACATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026414.9 |
||
| CDS CAA 90 bp | CTTCAGTACATCGCTGACCCTTTTGGTGGAGTATTCTATGTACTTTaGCAGCTGAGCGAAGTCTTCTGGGCTGATGAGGCCCTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQYIADPFGGVFYVL*QLSEVFWADEALLF Trigger: AAAGAGAAGGGCCTCATCAGCCCAGAAGACTTCGCTCAGCTGCAAAAGTACATAGAATACTCCACCAAAAGGGTCAGCGATGTACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS TCA 72 bp | ACATTGGCTTTTGACTTGGTCTTCTCAGCCGCAACTTaGCTAGTATGGAAGGACCAAAACAGAGCCCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: TLAFDLVFSAAT*LVWKDQNRAQH Trigger: ATGCTGGGCTCTGTTTTGGTCCTTCCATACTAGTCAAGTTGCGGCTGAGAAGACCAAGTCAAAAGCCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS TCA 72 bp | GCAGTACACATCACTGAGACAGATCACATTGGCTTTTaGCTTGGTCTTCTCAGCCGCAACTTGACTAGTATG | + |
|
Preference number: 6 (lower is better) Translates to: AVHITETDHIGF*LGLLSRNLTSM Trigger: CATACTAGTCAAGTTGCGGCTGAGAAGACCAAGTCAAAAGCCAATGTGATCTGTCTCAGTGATGTGTACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS CCA 72 bp | AATTGTTCAAATCCTAGGTACCCAATGGCATCTCCCTaGCAAAATCTGTTCATCTCACCATCGTCAAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: NCSNPRYPMASP*QNLFISPSSKT Trigger: GGTCTTTGACGATGGTGAGATGAACAGATTTTGCCAGGGAGATGCCATTGGGTACCTAGGATTTGAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
||
| CDS TCA 72 bp | TCATCTCACCATCGTCAAAGACCTTCAGTACATCGCTaGCCCTTTTGGTGGAGTATTCTATGTACTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSHHRQRPSVHR*PFWWSILCTFA Trigger: TGCAAAAGTACATAGAATACTCCACCAAAAGGGTCAGCGATGTACTGAAGGTCTTTGACGATGGTGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026414.9 ENSMUST00000219834.2 |
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