Pregenerated sensors for DGCR8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022718Ensembl transcript IDs: ENSMUST00000009321.11, ENSMUST00000232424.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCTTCTTTGCATGTGTACTGTGTAGTCACAGCTGTCCCCATGTaGCAGAGCCAGAGCCCAGACCCTGCCACAGGGAAGGAACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: TASLHVYCVVTAVPM*QSQSPDPATGKELR Trigger: CCTAAGTTCCTTCCCTGTGGCAGGGTCTGGGCTCTGGCTCTGGCACATGGGGACAGCTGTGACTACACAGTACACATGCAAAGAAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CCA 90 bp | GGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTaGGTCGGTGAGGCTGCAGAGATACCACCATTACCATATGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: GTGDQECVAAPVDSA*VGEAAEIPPLPYAF Trigger: AAAAGCATATGGTAATGGTGGTATCTCTGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CCA 90 bp | GGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTaGCCAACACACAGAAGCACATCAGCACAGGCTCCCCACCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GQFYVFRPSGYTLQP*PTHRSTSAQAPHPC Trigger: GCAAGGGTGGGGAGCCTGTGCTGATGTGCTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CCA 90 bp | AGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTaGCATCATAGGCCAGCCAAAGCTATAAAACCTGGTCATCTCATC | + |
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Preference number: 1 (lower is better) Translates to: SLSGSTRKNHSKGAT*HHRPAKAIKPGHLI Trigger: GATGAGATGACCAGGTTTTATAGCTTTGGCTGGCCTATGATGCCAGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR TCA 90 bp | ACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTTCTaGCCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: THKAGNSTGQDTCIF*PSLSGSTRKNHSKG Trigger: CCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGAAGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGCTGATGGTCTCTCCTaGGTAGCACTGTTGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PVRDREGTGDQECVAAPVADGLS*VALLAH Trigger: ATGGGCCAACAGTGCTACCCAGGAGAGACCATCAGC...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTACCTGCAATCAGGCCTaGCTGCACAGAGCAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: RDREGTGDQECVAAPVDSTCNQA*LHRAAI Trigger: GATAGCTGCTCTGTGCAGCCAGGCCTGATTGCAGGT...ACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CAA 90 bp | TGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTaGGCCAACACACAGAAGCACATCAGCACAGGCTCCCCACCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WTVLCVQTIRVHPTA*ANTQKHISTGSPPL Trigger: CAAGGGTGGGGAGCCTGTGCTGATGTGCTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR GCA 90 bp | TCTGACCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTTTGGAGGCCTGGAGCTaGAGAGTGATGATGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SDQVSVAPPERTIAKGLPLEAWS*RVMMCG Trigger: GCCACACATCATCACTCTGCAGCTCCAGGCCTCCAA...AGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | AGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAAGACCCGAGACCAGGAATGTGTaGCAGCACCTGTTGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: STSAQAPHPCSMTVHIRPETRNV*QHLLTV Trigger: CACTGTCAACAGGTGCTGCCACACATTCCTGGTCTC...GGGTCTTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR TCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTCCAAGTCTACCAACTTaGATTAAGGGTTCTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: PVRDREGTGDQECVAAPVPSLPT*IKGSFC Trigger: GCAAAAAGAACCCTTAATTCAAGTTGGTAGACTTGG...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCGGAAGGAACTTAGGTTaGAGGCCTGGAGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSGRNLG*RPGAAE Trigger: CTCTGCAGCTCCAGGCCTCCAACCTAAGTTCCTTCC...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTAAATTGATGAACAGATaGGCTTGGTTGTGCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: PVRDREGTGDQECVAAPVKLMNR*AWLCKN Trigger: ATTTTTGCACAACCAAGCCCATCTGTTCATCAATTT...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGAGTGATGGGCTACATTaGAGGCCAGTTCCCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: MVRDTEDVECSPSEQVIGSDGLH*RPVPYL Trigger: TAAATAGGGAACTGGCCTTCAATGTAGCCCATCACT...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTATAAAACCTGGTCATCTCATCTATCAACGAAGTATTACTTCTTGTCAGACAGCTGTCCCCATGTaGCAGAGCCAGAGCCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: KAIKPGHLIYQRSITSCQTAVPM*QSQSPD Trigger: GTCTGGGCTCTGGCTCTGGCACATGGGGACAGCTGT...CTGACAAGAAGTAATACTTCGTTGATAGATGAGATGACCAGGTTTTATAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR TCA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTTATATCCAGTCACATTaGGAGCAGCTTGTCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ENAKHTKQVILQDRIPASYIQSH*EQLVQN Trigger: GTTCTGGACAAGCTGCTCTCAATGTGACTGGATATA...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGCAAAGCTATAAAACCTaGTCATCTCATCTATCAACG | + |
|
Preference number: 2 (lower is better) Translates to: TAHVTHVSSGTWLETLRMQSYKT*SSHLST Trigger: CGTTGATAGATGAGATGACCAGGTTTTATAGCTTTG...CATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTCAGCTTGTCCAGAACTaGTTCTTTGCATGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFQLVQN*FFACVL Trigger: CAGTACACATGCAAAGAAGCAGTTCTGGACAAGCTG...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CCA 72 bp | TATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTaGCCAACACACAGAAGCACATCAGCACAGGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: YVFRPSGYTLQP*PTHRSTSAQAP Trigger: GGGAGCCTGTGCTGATGTGCTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CAA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCGGGAAGGAACTTAGGTaGGAGGCCTGGAGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FWTVLCVQTIRVHPTALAGKELR*EAWSCR Trigger: TCTGCAGCTCCAGGCCTCCAACCTAAGTTCCTTCCC...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CCA 72 bp | GGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTaGCATCATAGGCCAGCCAAAGCTATAAAACCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GSTRKNHSKGAT*HHRPAKAIKPG Trigger: ACCAGGTTTTATAGCTTTGGCTGGCCTATGATGCCAGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR TCA 72 bp | GCAGGTAATTCTACAGGACAGGATACCTGCATCTTCTaGCCAAGTCTCAGTGGCTCCACCAGAAAGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: AGNSTGQDTCIF*PSLSGSTRKNH Trigger: ATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGAAGATGCAGGTATCCTGTCCTGTAGAATTACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR TCA 72 bp | TGTGCCAGGCAGCTCTTGGTCAGTGATGGGCTACATTaGAGGCCAGTTCCCTATTTATGCATATTCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: CARQLLVSDGLH*RPVPYLCIFIC Trigger: ACAGATGAATATGCATAAATAGGGAACTGGCCTTCAATGTAGCCCATCACTGACCAAGAGCTGCCTGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR TCA 72 bp | TTAAGGGCAATGGTTAGTCAAAAGACTGAACACAACTaGATGGGAGGCAGAAAAGAATCAAGTGTCCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LRAMVSQKTEHN*MGGRKESSVQV Trigger: GACTTGGACACTTGATTCTTTTCTGCCTCCCATTCAGTTGTGTTCAGTCTTTTGACTAACCATTGCCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR-3UTR CAA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTTCCAGAACTGCTTCTTaGCATGTGTACTGTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFSRTAS*HVYCVV Trigger: GACTACACAGTACACATGCAAAGAAGCAGTTCTGGA...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | AGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTCTTCCGGACCGCAGGTaGGTGCCGGGCAGTGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: RDREGTGDQECVAAPVDSLPDRR*VPGSAR Trigger: CCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAG...ACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | GACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCACTCATCCATGGACCCTaGGTCTCCACCCATGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DQECVAAPVDSAWVGEAALIHGP*VSTHGV Trigger: GACTCCATGGGTGGAGACTCAGGGTCCATGGATGAG...TGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCGTGCGTGCCGGGCAGTaGGCGGGCTGTGGCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: FWTVLCVQTIRVHPTALAVRAGQ*AGCGHY Trigger: GTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCAC...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTCTCTCTGACTCGGCCTaGTTCCGCTTCATCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: PVRDREGTGDQECVAAPVLSDSA*FRFISR Trigger: CCGTGAGATGAAGCGGAAGCAGGCCGAGTCAGAGAG...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | AGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTGGCATCATAGGCCAGCAGTGCGCGGGCTGTaGCCACTACAGTTCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SGSTRKNHSKGATWHHRPAVRGL*PLQFGS Trigger: AGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGC...TGGCCTATGATGCCAGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTCTGAGTCTCCACCCATaGAGTCAGGCTCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PVRDREGTGDQECVAAPVLSLHP*SQALPE Trigger: CTCTGGAAGAGCCTGACTCCATGGGTGGAGACTCAG...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | AGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTAGGAACCCCAGTTCTTaGCATGTGGGTGCAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: RDREGTGDQECVAAPVDSRNPSS*HVGAVA Trigger: AGCTACTGCACCCACATGTCAAGAACTGGGGTTCCT...ACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCCAGGGCTCCAGCGGCTaGCTCAGCCCCCAATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSQGSSG*LSPQWV Trigger: GACCCATTGGGGGCTGAGGCAGCCGCTGGAGCCCTG...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | ACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGCAGGATGGGCCTCTCTaGCTCGGCCTGCTTCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: TAHVTHVSSGTWLETLRMQDGPL*LGLLPL Trigger: AAGCGGAAGCAGGCCGAGTCAGAGAGGCCCATCCTG...CATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | AGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTAACGTCCATTACCTCTaGATCACTGGACGTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RDREGTGDQECVAAPVDSNVHYL*ITGRLQ Trigger: CTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTT...ACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | AGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTGGCATCATAGGCCATTACCTCTGCATCACTaGACGTTTGCAGGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGSTRKNHSKGATWHHRPLPLHH*TFAGEV Trigger: CACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAA...TGGCCTATGATGCCAGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| 3UTR CAA 72 bp | TTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTaGGCCAACACACAGAAGCACATCAGCACAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LCVQTIRVHPTA*ANTQKHISTGS Trigger: GGAGCCTGTGCTGATGTGCTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCAGTCTCCTCCCGCTCTaGAGCCAGCCTCTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: FWTVLCVQTIRVHPTALASLLPL*SQPLHL Trigger: GAGATGAAGAGGCTGGCTGCAGAGCGGGAGGAGACT...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | TCTGACCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTCAATGGCTCTGTAGGTaGACGGCCACGACTTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SDQVSVAPPERTIAKGLPQWLCR*TATTFE Trigger: CTCAAAAGTCGTGGCCGTCCACCTACAGAGCCATTG...AGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGCAAGGGCTTGACAGGTaGCACCTCTCCACTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FLTAHVTHVSSGTWLETLQGLDR*HLSTGG Trigger: GCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTG...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | ACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGGCATCACTGGACGTTTaGAGGGGAGGTGGTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: TAHVTHVSSGTWLETLRMASLDV*RGGGGD Trigger: GTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGC...CATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR GCA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGATCATGTTTCCGTATaGTTCCTGTTCCCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PVRDREGTGDQECVAAPVDHVSV*FLFPRS Trigger: ACTTCTTGGGAACAGGAAGCATACGGAAACATGATC...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | AGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAAGACCCAAGTCACACCATCAATaGTCACGGAGGCACCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: STSAQAPHPCSMTVHIRPKSHHQ*SRRHQK Trigger: CTTTTGGTGCCTCCGTGACCATTGATGGTGTGACTT...GGGTCTTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | ATCGTGTACAATGTGCCAGGCAGCTCTTGGTCAGTGATGGGCTACATTGAAGGCTCCACTCTGTCTCTTTaGACGATTGCTTTAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: IVYNVPGSSWSVMGYIEGSTLSL*TIALAV Trigger: CACGGCTAAAGCAATCGTTCAAAGAGACAGAGTGGA...GCCTTCAATGTAGCCCATCACTGACCAAGAGCTGCCTGGCACATTGTACACGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCATCTCACGGTTGAACTaGCGCCGCTCAGCCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSISRLN*RRSAQV Trigger: GACTTGGGCTGAGCGGCGTCAGTTCAACCGTGAGAT...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR TCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGCAGAGGTCTCCTGCTTaGCCATTTTGCTGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGQRSPA*PFCCSH Trigger: GTGAGAGCAGCAAAATGGTCAAGCAGGAGACCTCTG...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CCA 90 bp | TCTGACCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTTCAGGATGTGAAGGTTaGGCCTGTTCTTCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDQVSVAPPERTIAKGLPSGCEG*ACSSWH Trigger: ATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGA...AGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | ACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGAAACAGGGCGGACCTTaGGGACACGCTGCATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TAHVTHVSSGTWLETLRMKQGGP*GHAACI Trigger: AATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTT...CATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCCCAAAGGGACAAGCATaGACGTCCCCACTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSPKGQA*TSPLTG Trigger: TCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGG...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGGTCTCTTTGAACGATTaGTTTAGCCGTGAACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGVSLND*FSREPA Trigger: GGCGGGTTCACGGCTAAAGCAATCGTTCAAAGAGAC...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | GGGCAATGGTTAGTCAAAAGACTGAACACAACTGAATGGGAGGCAGAAAAGAATTCATGGGGCAGCACTTaGAAGGGGCAAGCTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQWLVKRLNTTEWEAEKNSWGST*KGQARF Trigger: GAACCGAGCTTGCCCCTTCCAAGTGCTGCCCCATGA...ATTCTTTTCTGCCTCCCATTCAGTTGTGTTCAGTCTTTTGACTAACCATTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCGGTCCTTCTCATCCATaGACCCTGAGTCTCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSGPSHP*TLSLHP Trigger: TGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACC...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTACCAAAAGGCTCACTTaGATTCTCACATTCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDREGTGDQECVAAPVDSTKRLT*ILTFKE Trigger: TTCTTTGAATGTGAGAATCCAAGTGAGCCTTTTGGT...ACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| 3UTR CAA 72 bp | AGTCACATTGAGAGCAGCTTGTCCAGAACTGCTTCTTaGCATGTGTACTGTGTAGTCACAGCTGTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHIESSLSRTAS*HVYCVVTAVPM Trigger: CATGGGGACAGCTGTGACTACACAGTACACATGCAAAGAAGCAGTTCTGGACAAGCTGCTCTCAATGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| 3UTR CAA 72 bp | TTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTaGCCATCTTATCTTTCTAACAGCACATGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRRKMLLGGPQ*PSYLSNSTCHP Trigger: TGGGTGACATGTGCTGTTAGAAAGATAAGATGGCAACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAAGCTCCGTAGAAGTTaGATGGGTCGTCGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTAHVTHVSSGTWLETLKLRRS*MGRRQE Trigger: CTCCTGCCGACGACCCATTCAACTTCTACGGAGCTT...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGGTCTGGACCAAGTaGCCACTCGAGACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLTAHVTHVSSGTWLETLRVWTK*PLETLC Trigger: ACAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCT...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGTTGTCAGAGGTCTCCTaGTTGACCATTTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGLSEVS*LTILLL Trigger: GAGCAGCAAAATGGTCAAGCAGGAGACCTCTGACAA...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTTTGCAGGGGAGGTGGTaGAGACTGTTCATGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENAKHTKQVILQDRIPASLQGRW*RLFMGQ Trigger: CTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAA...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTCGTTTGCAGGGGAGGTaGTGGAGACTGTTCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENAKHTKQVILQDRIPASRLQGR*WRLFMG Trigger: CCCCATGAACAGTCTCCACCACCTCCCCTGCAAACG...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | ATCGTGTACAATGTGCCAGGCAGCTCTTGGTCAGTGATGGGCTACATTGAAGGCGTGTCACCCATTCCATaGTTTCTTTTAAGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVYNVPGSSWSVMGYIEGVSPIP*FLLRHS Trigger: TGAGTGCCTTAAAAGAAACCATGGAATGGGTGACAC...GCCTTCAATGTAGCCCATCACTGACCAAGAGCTGCCTGGCACATTGTACACGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTGGCATCATAGGCCAACATATTCACTCTTCTaGTTTTTCCCAGGAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGSTRKNHSKGATWHHRPTYSLF*FFPGTT Trigger: AGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGT...TGGCCTATGATGCCAGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGTGGGCCTGTTCTTCTTaGCATACTGCTGTAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGWACSS*HTAVAL Trigger: TAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCA...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCACTCGAGACTCTCTGTaGAGGTATACAGGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSTRDSL*RYTGTP Trigger: TGGAGTCCCTGTATACCTGCACAGAGAGTCTCGAGT...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGTGTATTCGTGCAGGATaGAAACCTCAGACTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGCIRAG*KPQTSH Trigger: ATGGGAAGTCTGAGGTTTGCATCCTGCACGAATACA...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCACCTTGAGGACACGCTaGATGTATTCGTGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSTLRTR*MYSCRM Trigger: CATCCTGCACGAATACATGCAGCGTGTCCTCAAGGT...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCTCTCTTCTTGTAGCTTaGTCAGGATGTGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FWTVLCVQTIRVHPTALASLLVA*SGCEGW Trigger: CCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGA...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCTCTCCATCAGATGGATaGTCACTGTCTCCGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSSPSDG*SLSPPY Trigger: ATATGGCGGAGACAGTGATCATCCATCTGATGGAGA...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | ATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATAGGGAATCTTGGTCATCATTaGCTGTACACTTGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVRDTEDVECSPSEQVIGNLGHH*LYTCLS Trigger: GGAGAGACAAGTGTACAGCCAATGATGACCAAGATT...CCCTATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGGTAGGCAGGGGATACTaGTTAGAGGAGGATCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTAHVTHVSSGTWLETLVGRGY*LEEDHV Trigger: AACATGATCCTCCTCTAAGCAGTATCCCCTGCCTAC...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGGGGACTCCAGAATTATaGAAAGTCATGATCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTAHVTHVSSGTWLETLGTPEL*KVMIHP Trigger: TGGATGGATCATGACTTTTCATAATTCTGGAGTCCC...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTAGCTTGCTCAGGATGTaGAGGTTGGGCCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFSLLRM*RLGLFF Trigger: GAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCT...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTAGGGAAATCCAACTCTaGAGACCGACCCAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFREIQL*RPTQGL Trigger: AAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCT...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAATGGTTAGTCAAAAGACTGAACACAACTGAATGGGAGGCAGAAAAGAATTTCTTCTTGGCATACTaGTGTAGCTCTATCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQWLVKRLNTTEWEAEKNFFLAY*CSSITL Trigger: GAGTGTGATAGAGCTACAGCAGTATGCCAAGAAGAA...ATTCTTTTCTGCCTCCCATTCAGTTGTGTTCAGTCTTTTGACTAACCATTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTATAAAACCTGGTCATCTCATCTATCAACGAAGTATTACTTCTTGTCAGTCCGTAGAAGTTGAATaGGTCGTCGGCAGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAIKPGHLIYQRSITSCQSVEVE*VVGRRF Trigger: GAACCTCCTGCCGACGACCCATTCAACTTCTACGGA...CTGACAAGAAGTAATACTTCGTTGATAGATGAGATGACCAGGTTTTATAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | GGGCAATGGTTAGTCAAAAGACTGAACACAACTGAATGGGAGGCAGAAAAGAATAATTATGAAAAGTCATaGTCCATCCATCAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GQWLVKRLNTTEWEAEKNNYEKS*SIHQAM Trigger: CATTGCCTGATGGATGGATCATGACTTTTCATAATT...ATTCTTTTCTGCCTCCCATTCAGTTGTGTTCAGTCTTTTGACTAACCATTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR TCA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTTTCCTCCAGATCAACTaGTTCATCTTTGCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFFLQIN*FIFAHL Trigger: GAGGTGTGCAAAGATGAATCAGTTGATCTGGAGGAA...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTCAAACTCTTTCTTTGTaGGTGCATCTTGTACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ENAKHTKQVILQDRIPASQTLSL*VHLVQI Trigger: TATCTGTACAAGATGCACCCACAAAGAAAGAGTTTG...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTATAAAACCTGGTCATCTCATCTATCAACGAAGTATTACTTCTTGTCAGTCCTCAATACTGATGTaGTTAAAATACTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAIKPGHLIYQRSITSCQSSILM*LKYSSS Trigger: AGAACTGGAGTATTTTAACCACATCAGTATTGAGGA...CTGACAAGAAGTAATACTTCGTTGATAGATGAGATGACCAGGTTTTATAGCTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | GAGAACTTCCGGACCGCAGGTGCGTGCCGGGCAGTGCGCGGGCTGTaGCCACTACAGTTCGGGTCTATGAGGAGGCGGCCCTTAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ENFRTAGACRAVRGL*PLQFGSMRRRPLEK Trigger: CTTCTCTAAGGGCCGCCTCCTCATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAGTTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS GCA 90 bp | ATCCTTAAGCAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTaGGTGCCGGGCAGTGCGCGGGCTGTGGCCACTACAGTTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKQLKVRGELPDRR*VPGSARAVATTVRV Trigger: GACCCGAACTGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS GCA 90 bp | TTAAGCAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTGCGTaGCGGGCAGTGCGCGGGCTGTGGCCACTACAGTTCGGGTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LSNLRSGENFRTAGA*RAVRGLWPLQFGSM Trigger: CATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS GCA 90 bp | CCTAGGCCTACCCCATTACCAACACTCCCGCCAAAGGGACAAGCATaGACGTCCCCACTGACAGGACTAAGGAGCTGGCCACACTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRPTPLPTLPPKGQA*TSPLTGLRSWPHSG Trigger: GCCTGAGTGTGGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTAATGGGGTAGGCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 90 bp | CAGCACTTGGAAGGGGCAAGCTCGGTTCTCCATCATCGCTTCTCCTaGGGGCTCACGCGGGAGAGGAGAGGGACTCTCATATGTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QHLEGASSVLHHRFS*GLTRERRGTLICLH Trigger: ATGGAGACATATGAGAGTCCCTCTCCTCTCCCGCGTGAGCCCGCAGGAGAAGCGATGATGGAGAACCGAGCTTGCCCCTTCCAAGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 90 bp | CCAAAGGGACAAGCATGCACGTCCCCACTGACAGGACTAAGGAGCTaGCCACACTCAGGCCGAGTGCTGCGTTCTACTCCTGTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKGQACTSPLTGLRS*PHSGRVLRSTPVYS Trigger: GCTGTACACAGGAGTAGAACGCAGCACTCGGCCTGAGTGTGGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | GACTGTGCACAAGGGCTCACCACCAGGCTGGGCAGATGCTACAATTaGCATCTTGGGTTTCTTCCGAGTCTCCTCCCGCTCTGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DCAQGLTTRLGRCYN*HLGFLPSLLPLCSQ Trigger: CTGGCTGCAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTGTGCACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | TCTGCATCACTGGACGTTTGCAGGGGAGGTGGTGGAGACTGTTCATaGGGCAGCACTTGGAAGGGGCAAGCTCGGTTCTCCATCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SASLDVCRGGGGDCS*GSTWKGQARFSIIA Trigger: AGCGATGATGGAGAACCGAGCTTGCCCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 90 bp | CCCCCAATGGGTCCTTCTCATCCATGGACCCTGAGTCTCCACCCATaGAGTCAGGCTCTTCCAGAGGGAAATCCAACTCTGCAGACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPMGPSHPWTLSLHP*SQALPEGNPTLQTD Trigger: GTCGGTCTGCAGAGTTGGATTTCCCTCTGGAAGAGCCTGACTCCATGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACCCATTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 90 bp | TCACCACCAGAGCCAACGTCCATTACCTCTGCATCACTGGACGTTTaGAGGGGAGGTGGTGGAGACTGTTCATGGGGCAGCACTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPEPTSITSASLDV*RGGGGDCSWGSTWK Trigger: CTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 90 bp | ACTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTGCATCACTaGACGTTTGCAGGGGAGGTGGTGGAGACTGTTCATGGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVHHHQSQRPLPLHH*TFAGEVVETVHGAA Trigger: TGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 90 bp | ACAAGGGCTCACCACCAGGCTGGGCAGATGCTACAATTGACATCTTaGGTTTCTTCCGAGTCTCCTCCCGCTCTGCAGCCAGCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRAHHQAGQMLQLTS*VSSESPPALQPASS Trigger: TGAAGAGGCTGGCTGCAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 90 bp | AGGTTCGGACTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTaGATCACTGGACGTTTGCAGGGGAGGTGGTGGAGACTGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RFGLSITTRANVHYL*ITGRLQGRWWRLFM Trigger: CATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS TCA 90 bp | CAGAGGGAAATCCAACTCTGCAGACCGACCCAAGGGCTTGACAGGTaGCACCTCTCCACTGGGGGCAAGATCACAGTTTTGTTCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QREIQLCRPTQGLDR*HLSTGGKITVLFSF Trigger: GAACGAGAACAAAACTGTGATCTTGCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | GCTCTTCCAGAGGGAAATCCAACTCTGCAGACCGACCCAAGGGCTTaGCAGGTGACACCTCTCCACTGGGGGCAAGATCACAGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALPEGNPTLQTDPRA*QVTPLHWGQDHSFV Trigger: AACAAAACTGTGATCTTGCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCTCTGGAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | AGAGAAGGATCCTTTGGAGAGAAGAGAAGCTCCGTAGAAGTTGAATaGGTCGTCGGCAGGAGGTTCGGACTGTCCATCACCACCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: REGSFGEKRSSVEVE*VVGRRFGLSITTRA Trigger: GGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTTCTCTCCAAAGGATCCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS-3UTR CAA 90 bp | GACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCAATCCACTCTGTCTCTTaGAACGATTGCTTTAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DQECVAAPVDSAWVGEAAIHSVS*NDCFSR Trigger: ACGGCTAAAGCAATCGTTCAAAGAGACAGAGTGGAT...TGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | AGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAAGACCCAAGGAACCCCAGTTCTaGACATGTGGGTGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: STSAQAPHPCSMTVHIRPKEPQF*TCGCSS Trigger: GCTACTGCACCCACATGTCAAGAACTGGGGTTCCTT...GGGTCTTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | AGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAAGACCCTCCTGCTTGACCATTTaGCTGCTCTCACGACCATAC | + |
|
Preference number: 5 (lower is better) Translates to: STSAQAPHPCSMTVHIRPSCLTI*LLSRPY Trigger: GTATGGTCGTGAGAGCAGCAAAATGGTCAAGCAGGA...GGGTCTTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | GTTTCCGTATGCTTCCTGTTCCCAAGAAGTAGGGTCTGGACCAAGTaGCCACTCGAGACTCTCTGTGCAGGTATACAGGGACTCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSVCFLFPRSRVWTK*PLETLCAGIQGLQN Trigger: ATTCTGGAGTCCCTGTATACCTGCACAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCATACGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | CCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTTCAACTGATTCATCTTaGCACACCTCAACTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVRDREGTGDQECVAAPVSTDSS*HTSTLA Trigger: GGCTAAAGTTGAGGTGTGCAAAGATGAATCAGTTGA...AACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | TCTGACCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTTCAGAGGTCTCCTGCTaGACCATTTTGCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDQVSVAPPERTIAKGLPSEVSC*TILLLS Trigger: TGAGAGCAGCAAAATGGTCAAGCAGGAGACCTCTGA...AGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | TCTGCAGCCAGCCTCTTCATCTCTTCTTGTAGCTTGCTCAGGATGTaGAGGTTGGGCCTGTTCTTCTTGGCATACTGCTGTAGCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: SAASLFISSCSLLRM*RLGLFFLAYCCSSI Trigger: GATAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAAGAGGCTGGCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCTCCATTCGCCTCTTCTaGGGAGCACAGAGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FWTVLCVQTIRVHPTALASIRLF*GAQRPS Trigger: AGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGA...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | TCTGACCAAGTCTCAGTGGCTCCACCAGAAAGAACCATAGCAAAGGGGCTACCTGGACGGCCACGACTTTaGAGCACTGTTTTAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDQVSVAPPERTIAKGLPGRPRL*STVLIL Trigger: CAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGTCC...AGGTAGCCCCTTTGCTATGGTTCTTTCTGGTGGAGCCACTGAGACTTGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCCCGCGCACTGTGTGTTaGCCGCATGCCATAACATAT | + |
|
Preference number: 5 (lower is better) Translates to: FWTVLCVQTIRVHPTALAPRTVC*PHAITY Trigger: ATATGTTATGGCATGCGGCAAACACACAGTGCGCGG...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | CCGCGCACTGTGTGTTTGCCGCATGCCATAACATATTCACTCTTCTaGTTTTTCCCAGGAACCACTTCAAACTTGATGGATGTGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTVCLPHAITYSLF*FFPGTTSNLMDVSP Trigger: GGGTGACACATCCATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | CTTCTTGTAGCTTGCTCAGGATGTGAAGGTTGGGCCTGTTCTTCTTaGCATACTGCTGTAGCTCTATCACACTCTTGTCAGAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLVACSGCEGWACSS*HTAVALSHSCQRSP Trigger: AGGAGACCTCTGACAAGAGTGTGATAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CCA 90 bp | CCAGCCTCTTCATCTCTTCTTGTAGCTTGCTCAGGATGTGAAGGTTaGGCCTGTTCTTCTTGGCATACTGCTGTAGCTCTATCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PASSSLLVACSGCEG*ACSSWHTAVALSHS Trigger: AGAGTGTGATAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAAGAGGCTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | ACCACTCGAGACTCTCTGTGCAGGTATACAGGGACTCCAGAATTATaGAAAGTCATGATCCATCCATCAGGCAATGGCTCTGTAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTRDSLCRYTGTPEL*KVMIHPSGNGSVGG Trigger: TCCACCTACAGAGCCATTGCCTGATGGATGGATCATGACTTTTCATAATTCTGGAGTCCCTGTATACCTGCACAGAGAGTCTCGAGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 90 bp | TGCTGCTCTCACGACCATACATGCGTAGTAAGGAACCCCAGTTCTTaGCATGTGGGTGCAGTAGCTGAAGGATTTTCTGAGATGCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: CCSHDHTCVVRNPSS*HVGAVAEGFSEMLI Trigger: AATTAGCATCTCAGAAAATCCTTCAGCTACTGCACCCACATGTCAAGAACTGGGGTTCCTTACTACGCATGTATGGTCGTGAGAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 90 bp | AACTCGTTTATTCTTACACCACCCGCGCACTGTGTGTTTGCCGCATaGCATAACATATTCACTCTTCTGGTTTTTCCCAGGAACCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSFILTPPAHCVFAA*HNIFTLLVFPRNHF Trigger: GAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAATAAACGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 90 bp | GATGATCACTGTCTCCGCCATATTTTTCCTCCATTCGCCTCTTCTTaGGAGCACAGAGACCTTCTTCTAGTAAAGCGTCCACATCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: DDHCLRHIFPPFASS*EHRDLLLVKRPHHC Trigger: ACAATGATGTGGACGCTTTACTAGAAGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACAGTGATCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 90 bp | TGGACGGCCACGACTTTTGAGCACTGTTTTAATCTTGGTCATCATTaGCTGTACACTTGTCTCTCCATCAGATGGATGATCACTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WTATTFEHCFNLGHH*LYTCLSIRWMITVS Trigger: GGAGACAGTGATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCTCATTGGCTGTACACTaGTCTCTCCATCAGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FWTVLCVQTIRVHPTALASLAVH*SLHQMD Trigger: ATCCATCTGATGGAGAGACAAGTGTACAGCCAATGA...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTACAGCCCAGCCTTGCTaGTCAGCTCATAGACTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ENAKHTKQVILQDRIPASTAQPC*SAHRLV Trigger: CACGAGTCTATGAGCTGACAAGCAAGGCTGGGCTGT...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 90 bp | ATCTTGGTCATCATTGGCTGTACACTTGTCTCTCCATCAGATGGATaGTCACTGTCTCCGCCATATTTTTCCTCCATTCGCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILVIIGCTLVSPSDG*SLSPPYFSSIRLFL Trigger: CAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACAGTGATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 90 bp | CACTTGGATTCTCACATTCAAAGAAATTATAAACAGGGCGGACCTTaGGGACACGCTGCATGTATTCGTGCAGGATGCAAACCTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLDSHIQRNYKQGGP*GHAACIRAGCKPQT Trigger: AGTCTGAGGTTTGCATCCTGCACGAATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTTATAATTTCTTTGAATGTGAGAATCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | TTTTGGACAGTTTTATGTGTTCAGACCATCAGGGTACACCCTACAGCCTTGGCCCACCAAAAGGCTCACTaGGATTCTCACATTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FWTVLCVQTIRVHPTALAHQKAH*DSHIQR Trigger: TCTTTGAATGTGAGAATCCAAGTGAGCCTTTTGGTG...GGCCAAGGCTGTAGGGTGTACCCTGATGGTCTGAACACATAAAACTGTCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | GGGCAATGGTTAGTCAAAAGACTGAACACAACTGAATGGGAGGCAGAAAAGAATTTGGGCCTGTTCTTCTaGGCATACTGCTGTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQWLVKRLNTTEWEAEKNLGLFF*AYCCSS Trigger: AGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAA...ATTCTTTTCTGCCTCCCATTCAGTTGTGTTCAGTCTTTTGACTAACCATTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | AAAGCTATAAAACCTGGTCATCTCATCTATCAACGAAGTATTACTTCTTGTCAGTGCATCACTGGACGTTaGCAGGGGAGGTGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAIKPGHLIYQRSITSCQCITGR*QGRWWR Trigger: TCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCA...CTGACAAGAAGTAATACTTCGTTGATAGATGAGATGACCAGGTTTTATAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | TTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGGCTACAATTGACATCTaGGGTTTCTTCCGAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLTAHVTHVSSGTWLETLATIDI*GFFRVS Trigger: GGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGC...CAGTGTCTCTAACCATGTACCTGAAGATACATGGGTGACATGTGCTGTTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 90 bp | ATATGGAGACAACAGCCCAGCCTTGCTTGTCAGCTCATAGACTCGTaGATCCTCAATACTGATGTGGTTAAAATACTCCAGTTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: IWRQQPSLACQLIDS*ILNTDVVKILQFFT Trigger: AGTGAAGAACTGGAGTATTTTAACCACATCAGTATTGAGGATTCACGAGTCTATGAGCTGACAAGCAAGGCTGGGCTGTTGTCTCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS GCA 90 bp | GTTCCTCATTGTCCTTCATTTTCTTATAATGTAGGCAGGGGATACTaGTTAGAGGAGGATCATGTTTCCGTATGCTTCCTGTTCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPHCPSFSYNVGRGY*LEEDHVSVCFLFPR Trigger: TCTTGGGAACAGGAAGCATACGGAAACATGATCCTCCTCTAAGCAGTATCCCCTGCCTACATTATAAGAAAATGAAGGACAATGAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS-3UTR CAA 90 bp | GAAAACCTTCATAAAAACGGTCCGCAGCAGATACATACAAGCAGGATCTACAGCGACTTCCCATTGGGATaGATGACAAACTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ENLHKNGPQQIHTSRIYSDFPLG*MTNSFF Trigger: AAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTC...GCTGTAGATCCTGCTTGTATGTATCTGCTGCGGACCGTTTTTATGAAGGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | GAAAATGCAAAACACACAAAGCAGGTAATTCTACAGGACAGGATACCTGCATCTTTCTTCGCAAGTTTTTaGCTGCTTGCAGTTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ENAKHTKQVILQDRIPASFFASF*LLAVPD Trigger: ATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAA...AGATGCAGGTATCCTGTCCTGTAGAATTACCTGCTTTGTGTGTTTTGCATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS-3UTR CAA 90 bp | CAGTATCTTCACTGCAATCTCGGAAGAGTATTTCTGGTGCTAAAATTTTGTTTTAGCTCTATCACACTCTaGTCAGAGGTCTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QYLHCNLGRVFLVLKFCFSSITL*SEVSCL Trigger: CAAGCAGGAGACCTCTGACAAGAGTGTGATAGAGCT...AAAACAAAATTTTAGCACCAGAAATACTCTTCCGAGATTGCAGTGAAGATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | CGGACCGCAGGTGCGTGCCGGGCAGTGCGCGGGCTGTaGCCACTACAGTTCGGGTCTATGAGGAGGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTAGACRAVRGL*PLQFGSMRRRP Trigger: GGGCCGCCTCCTCATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS GCA 72 bp | TTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTGCGTaGCGGGCAGTGCGCGGGCTGTGGCCACTACAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRSGENFRTAGA*RAVRGLWPLQF Trigger: GAACTGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS GCA 72 bp | CAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTaGGTGCCGGGCAGTGCGCGGGCTGTGGCCACTACA | + |
|
Preference number: 6 (lower is better) Translates to: QLKVRGELPDRR*VPGSARAVATT Trigger: TGTAGTGGCCACAGCCCGCGCACTGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 72 bp | CTGGACGTTTGCAGGGGAGGTGGTGGAGACTGTTCATaGGGCAGCACTTGGAAGGGGCAAGCTCGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDVCRGGGGDCS*GSTWKGQARFS Trigger: GGAGAACCGAGCTTGCCCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS CCA 72 bp | CAAGCATGCACGTCCCCACTGACAGGACTAAGGAGCTaGCCACACTCAGGCCGAGTGCTGCGTTCTACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QACTSPLTGLRS*PHSGRVLRSTP Trigger: AGGAGTAGAACGCAGCACTCGGCCTGAGTGTGGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CAA 90 bp | CACAAGGGCTCACCACCAGGCTGGGCAGATGCTACAATTGACATCTaGGGTTTCTTCCGAGTCTCCTCCCGCTCTGCAGCCAGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HKGSPPGWADATIDI*GFFRVSSRSAASLF Trigger: GAAGAGGCTGGCTGCAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS CAA 90 bp | CGACTGTGCACAAGGGCTCACCACCAGGCTGGGCAGATGCTACAATaGACATCTTGGGTTTCTTCCGAGTCTCCTCCCGCTCTGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLCTRAHHQAGQMLQ*TSWVSSESPPALQP Trigger: TGGCTGCAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTGTGCACAGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 72 bp | GAGGGAAATCCAACTCTGCAGACCGACCCAAGGGCTTaGCAGGTGACACCTCTCCACTGGGGGCAAGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGNPTLQTDPRA*QVTPLHWGQDH Trigger: GTGATCTTGCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 72 bp | GATCAGCTTCTGGTTGGCTGGCAGGATGGGCCTCTCTaGCTCGGCCTGCTTCCGCTTCATCTCACGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: DQLLVGWQDGPL*LGLLPLHLTVE Trigger: TTCAACCGTGAGATGAAGCGGAAGCAGGCCGAGTCAGAGAGGCCCATCCTGCCAGCCAACCAGAAGCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 72 bp | GAGCCAACGTCCATTACCTCTGCATCACTGGACGTTTaGAGGGGAGGTGGTGGAGACTGTTCATGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EPTSITSASLDV*RGGGGDCSWGS Trigger: GCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
||
| CDS GCA 72 bp | ACCCCATTACCAACACTCCCGCCAAAGGGACAAGCATaGACGTCCCCACTGACAGGACTAAGGAGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPLPTLPPKGQA*TSPLTGLRSWP Trigger: TGGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTAATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS GCA 72 bp | AACTTTAGCCTTCACTTGTCCCAGGGCTCCAGCGGCTaGCTCAGCCCCCAATGGGTCCTTCTCATCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: NFSLHLSQGSSG*LSPQWVLLIHG Trigger: TCCATGGATGAGAAGGACCCATTGGGGGCTGAGGCAGCCGCTGGAGCCCTGGGACAAGTGAAGGCTAAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
||
| CDS TCA 72 bp | CAAGGGCTCACCACCAGGCTGGGCAGATGCTACAATTaGCATCTTGGGTTTCTTCCGAGTCTCCTCCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLTTRLGRCYN*HLGFLPSLLPL Trigger: GAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS GCA 72 bp | CTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTaGATCACTGGACGTTTGCAGGGGAGGTGGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSITTRANVHYL*ITGRLQGRWWR Trigger: TCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS CCA 72 bp | CATTACCTCTGCATCACTGGACGTTTGCAGGGGAGGTaGTGGAGACTGTTCATGGGGCAGCACTTGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: HYLCITGRLQGR*WRLFMGQHLEG Trigger: CCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS CAA 72 bp | AGAGCCAACGTCCATTACCTCTGCATCACTGGACGTTaGCAGGGGAGGTGGTGGAGACTGTTCATGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RANVHYLCITGR*QGRWWRLFMGQ Trigger: CTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS CAA 72 bp | AGAGGGAAATCCAACTCTGCAGACCGACCCAAGGGCTaGACAGGTGACACCTCTCCACTGGGGGCAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: RGKSNSADRPKG*TGDTSPLGARS Trigger: TGATCTTGCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | ATCACCACCAGAGCCAACGTCCATTACCTCTGCATCACTGGACGTTaGCAGGGGAGGTGGTGGAGACTGTTCATGGGGCAGCACTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ITTRANVHYLCITGR*QGRWWRLFMGQHLE Trigger: TTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS CAA 90 bp | GGCTCTTCCAGAGGGAAATCCAACTCTGCAGACCGACCCAAGGGCTaGACAGGTGACACCTCTCCACTGGGGGCAAGATCACAGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GSSRGKSNSADRPKG*TGDTSPLGARSQFC Trigger: ACAAAACTGTGATCTTGCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGATTTCCCTCTGGAAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | CACCACCAGAGCCAACGTCCATTACCTCTGCATCACTaGACGTTTGCAGGGGAGGTGGTGGAGACTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HHQSQRPLPLHH*TFAGEVVETVH Trigger: ATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS CCA 72 bp | GGTCCTTCTCATCCATGGACCCTGAGTCTCCACCCATaGAGTCAGGCTCTTCCAGAGGGAAATCCAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPSHPWTLSLHP*SQALPEGNPTL Trigger: CAGAGTTGGATTTCCCTCTGGAAGAGCCTGACTCCATGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | TCCTTTGGAGAGAAGAGAAGCTCCGTAGAAGTTGAATaGGTCGTCGGCAGGAGGTTCGGACTGTCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: SFGEKRSSVEVE*VVGRRFGLSIT Trigger: GGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTTCTCTCCAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS TCA 72 bp | AGGATCCTTTGGAGAGAAGAGAAGCTCCGTAGAAGTTaGATGGGTCGTCGGCAGGAGGTTCGGACTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RILWREEKLRRS*MGRRQEVRTVH Trigger: ATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTTCTCTCCAAAGGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009321.11 ENSMUST00000232424.2 |
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| CDS TCA 72 bp | TGCTTCCTGTTCCCAAGAAGTAGGGTCTGGACCAAGTaGCCACTCGAGACTCTCTGTGCAGGTATACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CFLFPRSRVWTK*PLETLCAGIQG Trigger: TCCCTGTATACCTGCACAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS GCA 72 bp | AGGGGATACTGCTTAGAGGAGGATCATGTTTCCGTATaGTTCCTGTTCCCAAGAAGTAGGGTCTGGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: RGYCLEEDHVSV*FLFPRSRVWTK Trigger: CTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCATACGGAAACATGATCCTCCTCTAAGCAGTATCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | TGCTTGCAGTTCCAGATCCGTAAGTCACACCATCAATaGTCACGGAGGCACCAAAAGGCTCACTTGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: CLQFQIRKSHHQ*SRRHQKAHLDS Trigger: AGAATCCAAGTGAGCCTTTTGGTGCCTCCGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | GCTTGCTCAGGATGTGAAGGTTGGGCCTGTTCTTCTTaGCATACTGCTGTAGCTCTATCACACTCTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACSGCEGWACSS*HTAVALSHSCQ Trigger: CTGACAAGAGTGTGATAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | GGAGAAATTCAAGGCCTCTTCATCCACTCTGTCTCTTaGAACGATTGCTTTAGCCGTGAACCCGCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GEIQGLFIHSVS*NDCFSREPACS Trigger: GGAACAGGCGGGTTCACGGCTAAAGCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | GAGAAATTCAAGGCCTCTTCATCCACTCTGTCTCTTTaGACGATTGCTTTAGCCGTGAACCCGCCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EKFKASSSTLSL*TIALAVNPPVP Trigger: AGGAACAGGCGGGTTCACGGCTAAAGCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | CACGACCATACATGCGTAGTAAGGAACCCCAGTTCTTaGCATGTGGGTGCAGTAGCTGAAGGATTTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HDHTCVVRNPSS*HVGAVAEGFSE Trigger: CTCAGAAAATCCTTCAGCTACTGCACCCACATGTCAAGAACTGGGGTTCCTTACTACGCATGTATGGTCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | AGCCTCTTCATCTCTTCTTGTAGCTTGCTCAGGATGTaGAGGTTGGGCCTGTTCTTCTTGGCATACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLFISSCSLLRM*RLGLFFLAYCC Trigger: ACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAAGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS GCA 72 bp | ATTCTTACACCACCCGCGCACTGTGTGTTTGCCGCATaGCATAACATATTCACTCTTCTGGTTTTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ILTPPAHCVFAA*HNIFTLLVFPR Trigger: CCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | TGTCTCCGCCATATTTTTCCTCCATTCGCCTCTTCTTaGGAGCACAGAGACCTTCTTCTAGTAAAGCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CLRHIFPPFASS*EHRDLLLVKRP Trigger: TGGACGCTTTACTAGAAGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | ATCCTCATAGGAGAAATTCAAGGCCTCTTCATCCACTCTGTCTCTTaGAACGATTGCTTTAGCCGTGAACCCGCCTGTTCCTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ILIGEIQGLFIHSVS*NDCFSREPACSFFI Trigger: GATGAAGAAGGAACAGGCGGGTTCACGGCTAAAGCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTCCTATGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | TGTTTCCCAACTCGTTTATTCTTACACCACCCGCGCACTGTGTGTTaGCCGCATGCCATAACATATTCACTCTTCTGGTTTTTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CFPTRLFLHHPRTVC*PHAITYSLFWFFPG Trigger: TCCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAATAAACGAGTTGGGAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | AGAATTATGAAAAGTCATGATCCATCCATCAGGCAATaGCTCTGTAGGTGGACGGCCACGACTTTTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RIMKSHDPSIRQ*LCRWTATTFEH Trigger: GTGCTCAAAAGTCGTGGCCGTCCACCTACAGAGCCATTGCCTGATGGATGGATCATGACTTTTCATAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | TCATCTCTTCTTGTAGCTTGCTCAGGATGTGAAGGTTaGGCCTGTTCTTCTTGGCATACTGCTGTAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSLLVACSGCEG*ACSSWHTAVAL Trigger: TAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | TTCTTCTTGGCATACTGCTGTAGCTCTATCACACTCTaGTCAGAGGTCTCCTGCTTGACCATTTTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FFLAYCCSSITL*SEVSCLTILLL Trigger: GAGCAGCAAAATGGTCAAGCAGGAGACCTCTGACAAGAGTGTGATAGAGCTACAGCAGTATGCCAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | GCTTTAGCCGTGAACCCGCCTGTTCCTTCTTCATCTAGCTCCAAATaGTCAGTAAAATCTTCTAACTCATCGAGCACTGCATACTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ALAVNPPVPSSSSSK*SVKSSNSSSTAYST Trigger: AGTGGAGTATGCAGTGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAACAGGCGGGTTCACGGCTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | ACACGCTGCATGTATTCGTGCAGGATGCAAACCTCAGACTTCCCATaGGGATTGATGACAAACTCTTTCTTTGTGGGTGCATCTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: TRCMYSCRMQTSDFP*GLMTNSFFVGASCT Trigger: TGTACAAGATGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGAATACATGCAGCGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | ATCATTGGCTGTACACTTGTCTCTCCATCAGATGGATaGTCACTGTCTCCGCCATATTTTTCCTCCATTCGC | + |
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Preference number: 6 (lower is better) Translates to: IIGCTLVSPSDG*SLSPPYFSSIR Trigger: GCGAATGGAGGAAAAATATGGCGGAGACAGTGATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | CAACAGCCCAGCCTTGCTTGTCAGCTCATAGACTCGTaGATCCTCAATACTGATGTGGTTAAAATACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QQPSLACQLIDS*ILNTDVVKILQ Trigger: CTGGAGTATTTTAACCACATCAGTATTGAGGATTCACGAGTCTATGAGCTGACAAGCAAGGCTGGGCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | TCGTGCAGGATGCAAACCTCAGACTTCCCATTGGGATaGATGACAAACTCTTTCTTTGTGGGTGCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SCRMQTSDFPLG*MTNSFFVGASC Trigger: ACAAGATGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | ACTCGTTTATTCTTACACCACCCGCGCACTGTGTGTTaGCCGCATGCCATAACATATTCACTCTTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TRLFLHHPRTVC*PHAITYSLFWF Trigger: AAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAATAAACGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS TCA 72 bp | TCTCACATTCAAAGAAATTATAAACAGGGCGGACCTTaGGGACACGCTGCATGTATTCGTGCAGGATGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SHIQRNYKQGGP*GHAACIRAGCK Trigger: TTTGCATCCTGCACGAATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTTATAATTTCTTTGAATGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | GTGAACCCGCCTGTTCCTTCTTCATCTAGCTCCAAATaGTCAGTAAAATCTTCTAACTCATCGAGCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VNPPVPSSSSSK*SVKSSNSSSTA Trigger: TGCAGTGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAACAGGCGGGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 72 bp | ATGTATTCGTGCAGGATGCAAACCTCAGACTTCCCATaGGGATTGATGACAAACTCTTTCTTTGTGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: MYSCRMQTSDFP*GLMTNSFFVGA Trigger: TGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGAATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS GCA 72 bp | TGTCCTTCATTTTCTTATAATGTAGGCAGGGGATACTaGTTAGAGGAGGATCATGTTTCCGTATGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CPSFSYNVGRGY*LEEDHVSVCFL Trigger: CAGGAAGCATACGGAAACATGATCCTCCTCTAAGCAGTATCCCCTGCCTACATTATAAGAAAATGAAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | GTGTGTTTGCCGCATGCCATAACATATTCACTCTTCTaGTTTTTCCCAGGAACCACTTCAAACTTGATGGAT | + |
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Preference number: 6 (lower is better) Translates to: VCLPHAITYSLF*FFPGTTSNLMD Trigger: ATCCATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CCA 72 bp | ACGACTTTTGAGCACTGTTTTAATCTTGGTCATCATTaGCTGTACACTTGTCTCTCCATCAGATGGATGATC | + |
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Preference number: 6 (lower is better) Translates to: TTFEHCFNLGHH*LYTCLSIRWMI Trigger: GATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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| CDS CAA 90 bp | ATAACATATTCACTCTTCTGGTTTTTCCCAGGAACCACTTCAAACTaGATGGATGTGTCACCCATTCCATGGTTTCTTTTAAGGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: ITYSLFWFFPGTTSN*MDVSPIPWFLLRHS Trigger: TGAGTGCCTTAAAAGAAACCATGGAATGGGTGACACATCCATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009321.11 |
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