Pregenerated sensors for DGCR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003166Ensembl transcript IDs: ENSMUST00000012152.13, ENSMUST00000066127.13, ENSMUST00000117082.2, ENSMUST00000117945.8, ENSMUST00000155943.9
Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGCAGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATaGCCCAACCCTCCACAAGGGTCTAGAGTCTACTCCTGGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: QAEHRDPECGREKPA*PNPPQGSRVYSWGA Trigger: GGCTCCCCAGGAGTAGACTCTAGACCCTTGTGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | GTCCTTTGGGAAAAATCCCCAGGTACCCGGTTGCTGTGGAGGGACTaGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: VLWEKSPGTRLLWRD*EACMWLADTGLQQC Trigger: ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | GGCAAGGCAGTCCTGGGAAAGGGGCCTCCTAGGAGCCTGTCCCTCTaGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTCATCAAAT | + |
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Preference number: 1 (lower is better) Translates to: GKAVLGKGPPRSLSL*GLAGWVKNTQTSSN Trigger: ATTTGATGAGGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGGAGGCCCCTTTCCCAGGACTGCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | CCTGTGTCAGGAGACAAGACCACTGCATGGAGCTGGAGCTGGCAATaGAGTCCTTTGGGAAAAATCCCCAGGTACCCGGTTGCTGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVSGDKTTAWSWSWQ*SPLGKIPRYPVAVE Trigger: CTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCCTGACACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | GGGGCAAGGGCCCTCTGCAGAGGGATGTCTGCAGCAGATGGTCTGTaGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTC | + |
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Preference number: 1 (lower is better) Translates to: GARALCRGMSAADGL*AQTWGRLSVSNHIL Trigger: GAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCACAGACCATCTGCTGCAGACATCCCTCTGCAGAGGGCCCTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | CCCCCAGGTAAAGATGGTACAGGCACTTGCTCCTCTCTGAGTGCCTaGTTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: PPGKDGTGTCSSLSA*FQFLCTHPQLVGMW Trigger: CCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCTTTACCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | AATGTACAGTATCAAATTCCACTTCAAGGCAGGTCAGAGGGCACCTaGCCTCAGAAGAGTGGCAAGGCAGTCCTGGGAAAGGGGCCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: NVQYQIPLQGRSEGT*PQKSGKAVLGKGPP Trigger: AGGAGGCCCCTTTCCCAGGACTGCCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTTGATACTGTACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | TGGAGTAGGGTCCAGGCTATGACAGGACCCCTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGACAAGAAACATACACTCCTAGCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: WSRVQAMTGPLQVPH*DRCLLDKKHTLLAH Trigger: GTGGGCTAGGAGTGTATGTTTCTTGTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAGGGGTCCTGTCATAGCCTGGACCCTACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| 3UTR GCA 90 bp | AGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAAGCAGTTCAGATaGTCTGCTGCCTCTAAGCAGCCACTAGCGCTAGCTCTACTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SQYSSCECFPQKQFR*SAASKQPLALALLC Trigger: ACACAGTAGAGCTAGCGCTAGTGGCTGCTTAGAGGCAGCAGAGCATCTGAACTGCTTCTGGGGAAAGCATTCACAGCTGCTGTACTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR GCA 90 bp | GCAGAGGTATACCATGGAAGAGTGCTAGGAATGAGCAGGGCCTCCTaGCACAGTGCTGGCCTCAAAGCAAAGCTAGAAATGGTGTGGCAA | + |
|
Preference number: 1 (lower is better) Translates to: AEVYHGRVLGMSRAS*HSAGLKAKLEMVWQ Trigger: TTGCCACACCATTTCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAGGCCCTGCTCATTCCTAGCACTCTTCCATGGTATACCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | TGTGGCTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTaGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: CGWQTLGSSSVHGVK*TQMTTQDVHLNHSL Trigger: AAGAGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | ACTAACAGCCCCCAGGTAAAGATGGTACAGGCACTTGCTCCTCTCTaGGTGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: TNSPQVKMVQALAPL*VPDFSFYVHTRSWW Trigger: CCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCTTTACCTGGGGGCTGTTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | GTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTaGGCTCCTGTGAACCATTATCACCTGCAAACATTTGGCCACATT | + |
|
Preference number: 1 (lower is better) Translates to: VAHGQMAHVGYCPLS*APVNHYHLQTFGHI Trigger: AATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | GGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTGAGCTCCTGTaGACCATTATCACCTGCAAACATTTGGCCACATTAGGACACACA | + |
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Preference number: 1 (lower is better) Translates to: GKWLMWGIVPCPELL*TIITCKHLATLGHT Trigger: TGTGTGTCCTAATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGACAATACCCCACATGAGCCATTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR GCA 90 bp | CAAACCTTAGAAATGCTAAAGGCCTGTGTCAGGAGACAAGACCACTaGATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCC | + |
|
Preference number: 1 (lower is better) Translates to: QTLEMLKACVRRQDH*MELELAMESFGKNP Trigger: GGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCCTGACACAGGCCTTTAGCATTTCTAAGGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | TTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATaGACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LNHSLPKQPFMAQIG*TGMARPSGHSPASR Trigger: TCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CCA 90 bp | GGGCCTTGCGGGATGGGTAAAGAACACACAAACCTCATCAAATCTTaGATTTGGGATTATTCACCAGTGAGATCTGGCAGACTCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: GPCGMGKEHTNLIKS*IWDYSPVRSGRLQC Trigger: GCACTGGAGTCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTGATGAGGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | GAGAATGCAGTAAGCAAGCCCATCCAAAGATGTACTTGGTATAAGTaGAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGCTTTCAACAC | + |
|
Preference number: 1 (lower is better) Translates to: ENAVSKPIQRCTWYK*SPLPLLLGNVCFQH Trigger: GTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTTGGATGGGCTTGCTTACTGCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR TCA 90 bp | AACACACAAACCTCATCAAATCTTGGATTTGGGATTATTCACCAGTaGGATCTGGCAGACTCCAGTGCTTGGAACTGGAATAGCAATAGT | + |
|
Preference number: 1 (lower is better) Translates to: NTQTSSNLGFGIIHQ*DLADSSAWNWNSNS Trigger: ACTATTGCTATTCCAGTTCCAAGCACTGGAGTCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTGATGAGGTTTGTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCGTCTGTGCAGTCTCCTaGGGCACTGCTGTGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTVCAVS*GTAVWS Trigger: GGACCACACAGCAGTGCCTCAGGAGACTGCACAGAC...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGACAGCTGGTGGGGATGTaGCAGTGGAGTAGGGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RTGSPQRASTAAVNAFPRQLVGM*QWSRVQ Trigger: CTGGACCCTACTCCACTGCCACATCCCCACCAGCTG...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCGTGGCTGGCAGACACTaGGCTCCAGCAGTGTTCACG | + |
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Preference number: 2 (lower is better) Translates to: GARVAHGQMAHVGYCPLSVAGRH*APAVFT Trigger: CGTGAACACTGCTGGAGCCCAGTGTCTGCCAGCCAC...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACGATCGATCGGCACCTTaGAATTTGCAGCTGGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: LADTGLQQCSRGEVDSDDDRSAP*NLQLAP Trigger: CGGGGCCAGCTGCAAATTTCAAGGTGCCGATCGATC...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCGATCGATCGGCACCTTaGAATTTGCAGCTGGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: RAQGSRVWQRKASMPQPSDRSAP*NLQLAP Trigger: CGGGGCCAGCTGCAAATTTCAAGGTGCCGATCGATC...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCGCAGCAGATGGTCTGTaGGCTCAGACATGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTAADGL*AQTWGR Trigger: TCTGCCCCATGTCTGAGCCCACAGACCATCTGCTGC...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTTGCTGTGGAGGGACTaGGAGGCATGTATGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTLLWRD*EACMWL Trigger: CAGCCACATACATGCCTCCCAGTCCCTCCACAGCAA...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCGACAAGACCACTGCATaGAGCTGGAGCTGGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GARVAHGQMAHVGYCPLSDKTTA*SWSWQW Trigger: CCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTC...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCCTGTGGGCTCAGACATaGGGCAGACTATCCGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRLWAQT*GRLSVS Trigger: GCTTACGGATAGTCTGCCCCATGTCTGAGCCCACAG...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTCCTTAGGGCTCTTTTaGGTGGCCTGGCACCAACAC | + |
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Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTSLGLF*VAWHQH Trigger: GTGTTGGTGCCAGGCCACCCAAAAGAGCCCTAAGGA...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGACTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: RTGSPQRASTAAVNAFPRLQVPH*DRCLLD Trigger: GTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAG...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCCTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRLQVPH*DRCLLD Trigger: GTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAG...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCCCAGTACAGCAGCTGTaGATGCTTTCCCCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TGMARPSGHSPASRAQGSPVQQL*MLSPEA Trigger: TGCTTCTGGGGAAAGCATTCACAGCTGCTGTACTGG...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCGAAGCCCACTGCCTCTaGTTCTTGGAAACGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: AWHQHNSQLLLWSMAAQREAHCL*FLETCA Trigger: AGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTC...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCGAAGAAGCTCAAAGGTaGAAGAGTGGCCCATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTEEAQR*KSGPWA Trigger: TGCCCATGGGCCACTCTTGCACCTTTGAGCTTCTTC...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACTCCTGCCACAGTGCTaGCCTCAAAGCAAAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: EHRDPECGREKPACPNPPLLPQC*PQSKAR Trigger: TCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAG...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSLQVPH*DRCLLD Trigger: GTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCAGAGCTGTGTGGGTCTaGTCATGCACAACAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRRAVWV*SCTTEQ Trigger: CTGTTCTGTTGTGCATGATCAGACCCACACAGCTCT...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCTCTAGAGTCTACTCCTaGGGAGCCATGCAGAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: TGMARPSGHSPASRAQGSSRVYS*GAMQRY Trigger: ATACCTCTGCATGGCTCCCCAGGAGTAGACTCTAGA...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGLQVPH*DRCLLD Trigger: GTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCCAGTACAGCAGCTGTaGATGCTTTCCCCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGPVQQL*MLSPEA Trigger: TGCTTCTGGGGAAAGCATTCACAGCTGCTGTACTGG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCCTCAGGATGTCCACTTaGACCATTCTCTTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTLRMST*TILFPN Trigger: GTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGAG...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACCTCAGGATGTCCACTTaGACCATTCTCTTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LADTGLQQCSRGEVDSDDLRMST*TILFPN Trigger: GTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGAG...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATATGAGCAGGGCCTCCTaGCACAGTGCTGGCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHMSRAS*HSAGLK Trigger: TTTGAGGCCAGCACTGTGGCAGGAGGCCCTGCTCAT...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCACTCCTGTTCTCACCTaGACAGGAGTCACAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: WAQTWGRLSVSNHILLSATPVLT*TGVTGP Trigger: TGGGCCTGTGACTCCTGTGCAGGTGAGAACAGGAGT...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACTTCTTGGAAACGTGTaGTTTCAACACCTGTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: EHRDPECGREKPACPNPPLLGNV*FQHLCH Trigger: ATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAG...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCCTTCTTGGAAACGTGTaGTTTCAACACCTGTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RAQGSRVWQRKASMPQPSLLGNV*FQHLCH Trigger: ATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAG...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCTGTCCTGAGCTCCTGTGAACCATTATCACCTGCAAACATTTGGCCACATGCATGGAGCTGGAGCTaGCAATGGAGTCCTTTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SPVLSSCEPLSPANIWPHAWSWS*QWSPLG Trigger: TCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGC...ATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCTGTCCTGAGCTCCTGTGAACCATTATCACCTGCAAACATTTGGCCACATCTTCAAGTCCCCCACTaGGATAGGTGTCTTCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPVLSSCEPLSPANIWPHLQVPH*DRCLLD Trigger: GTCCAGAAGACACCTATCTCAGTGGGGGACTTGAAG...ATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTTACAGCAGCTGTGAATaGTTTCCCCAGAAGCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSYSSCE*FPQKQF Trigger: GAACTGCTTCTGGGGAAAGCATTCACAGCTGCTGTA...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CAA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTaGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VHGVKWTQMTTQDVH*NHSLPKQPFMAQIG Trigger: TCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATGAAGCCCACTGCCTCTaGTTCTTGGAAACGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDEAHCL*FLETCA Trigger: AGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTC...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATCTCCTGCCACAGTGCTaGCCTCAAAGCAAAGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDLLPQC*PQSKAR Trigger: TCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAG...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCCTCTCTGAGTGCCTaGTTTCAGTTTCTATGTACA | + |
|
Preference number: 2 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHSSLSA*FQFLCT Trigger: TGTACATAGAAACTGAAATCAGGCACTCAGAGAGGA...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCTCCTCTCTGAGTGCCTaGTTTCAGTTTCTATGTACA | + |
|
Preference number: 2 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGSSLSA*FQFLCT Trigger: TGTACATAGAAACTGAAATCAGGCACTCAGAGAGGA...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGATCAAATCTTGGATTTaGGATTATTCACCAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KFHFKAGQRAPGLRRVARIKSWI*DYSPVR Trigger: TCTCACTGGTGAATAATCCCAAATCCAAGATTTGAT...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTCCTCTCTGAGTGCCTaGTTTCAGTTTCTATGTACA | + |
|
Preference number: 2 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDSSLSA*FQFLCT Trigger: TGTACATAGAAACTGAAATCAGGCACTCAGAGAGGA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | AGGGCACCTGGCCTCAGAAGAGTGGCAAGGCAGTCCTaGGAAAGGGGCCTCCTAGGAGCCTGTCCCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RAPGLRRVARQS*ERGLLGACPSG Trigger: CCCAGAGGGACAGGCTCCTAGGAGGCCCCTTTCCCAGGACTGCCTTGCCACTCTTCTGAGGCCAGGTGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | GGTAGAGGGGGCAAGGGCCCTCTGCAGAGGGATGTCTaGAGCAGATGGTCTGTGGGCTCAGACATGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRGGKGPLQRDV*SRWSVGSDMGQ Trigger: CTGCCCCATGTCTGAGCCCACAGACCATCTGCTGCAGACATCCCTCTGCAGAGGGCCCTTGCCCCCTCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GGTTGCTGTGGAGGGACTGGGAGGCATGTATGTGGCTaGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GCCGGTGRHVCG*QTLGSSSVHGV Trigger: CACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | ACCCGGTTGCTGTGGAGGGACTGGGAGGCATGTATGTaGCTGGCAGACACTGGGCTCCAGCAGTGTTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: TRLLWRDWEACM*LADTGLQQCSR Trigger: CCGTGAACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACCGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | CTCCCAGGGATCGATCGGCACCTTGAAATTTGCAGCTaGCCCCGGACAGGAAGCCCCCAGAGAGCCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: LPGIDRHLEICS*PRTGSPQRAST Trigger: TGTACTGGCTCTCTGGGGGCTTCCTGTCCGGGGCCAGCTGCAAATTTCAAGGTGCCGATCGATCCCTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GTCCTGGGAAAGGGGCCTCCTAGGAGCCTGTCCCTCTaGGGCCTTGCGGGATGGGTAAAGAACACACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: VLGKGPPRSLSL*GLAGWVKNTQT Trigger: GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGGAGGCCCCTTTCCCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GAAAAATCCCCAGGTACCCGGTTGCTGTGGAGGGACTaGGAGGCATGTATGTGGCTGGCAGACACTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EKSPGTRLLWRD*EACMWLADTGL Trigger: GAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACCGGGTACCTGGGGATTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCAGATGGTACAGGCACTaGCTCCTCTCTGAGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTRWYRH*LLSECL Trigger: CAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCT...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | TGGAGCATGGCTGCCCAGCGCCCAGCACTTAGGACTTaGTGGAGGCATGACGAACTTCCTGATGTCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSMAAQRPALRT*WRHDELPDVLS Trigger: GCTAAGGACATCAGGAAGTTCGTCATGCCTCCAGCAAGTCCTAAGTGCTGGGCGCTGGGCAGCCATGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GTCCTTTGGGAAAAATCCCCAGGTACCCGGTTGCTGTaGAGGGACTGGGAGGCATGTATGTGGCTGGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLWEKSPGTRLL*RDWEACMWLAD Trigger: GTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTaGGAAAAATCCCCAGGTACCCGGTTGCTGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLHGAGAGNGVL*EKSPGTRLLWR Trigger: CCTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GTGGCCTGGCACCAACACAATTCCCAATTGTTGCTCTaGAGCATGGCTGCCCAGCGCCCAGCACTTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: VAWHQHNSQLLL*SMAAQRPALRT Trigger: AGTCCTAAGTGCTGGGCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGGTCCTTAGGGCTCTTTaGGGTGGCCTGGCACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: KFHFKAGQRAPGLRRVARVLRAL*GGLAPT Trigger: TGTTGGTGCCAGGCCACCCAAAAGAGCCCTAAGGAC...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | GGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTaGATGCTTTCCCCAGAAGCAGTTCAGATGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQEAPREPVQQL*MLSPEAVQMLC Trigger: GCAGAGCATCTGAACTGCTTCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | AGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATaGTTTCCCCAGAAGCAGTTCAGATGCTCTGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RKPPESQYSSCE*FPQKQFRCSAA Trigger: GGCAGCAGAGCATCTGAACTGCTTCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | CACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATaGCCCAACCCTCCACAAGGGTCTAGAGTCTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: HRDPECGREKPA*PNPPQGSRVYS Trigger: GGAGTAGACTCTAGACCCTTGTGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | TTTGGGTGGCCTGGCACCAACACAATTCCCAATTGTTaGTCTGGAGCATGGCTGCCCAGCGCCCAGCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: FGWPGTNTIPNC*SGAWLPSAQHL Trigger: TAAGTGCTGGGCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGCCACCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | TGCCCCAACCCTCCACAAGGGTCTAGAGTCTACTCCTaGGGAGCCATGCAGAGGTATACCATGGAAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CPNPPQGSRVYS*GAMQRYTMEEC Trigger: GCACTCTTCCATGGTATACCTCTGCATGGCTCCCCAGGAGTAGACTCTAGACCCTTGTGGAGGGTTGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | CATTCACCAGCAAGCAGAGCACAGGGATCCAGAGTGTaGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HSPASRAQGSRV*QRKASMPQPST Trigger: TGTGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCTGCTTGCTGGTGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GCCCTCTGCAGAGGGATGTCTGCAGCAGATGGTCTGTaGGCTCAGACATGGGGCAGACTATCCGTAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALCRGMSAADGL*AQTWGRLSVSN Trigger: ATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCACAGACCATCTGCTGCAGACATCCCTCTGCAGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTAGATGGTACAGGCACTaGCTCCTCTCTGAGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGRWYRH*LLSECL Trigger: CAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCT...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTGGCAATGGAGTCCTTaGGGAAAAATCCCCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTWQWSP*GKIPRY Trigger: GTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCA...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GGAGACAAGACCACTGCATGGAGCTGGAGCTGGCAATaGAGTCCTTTGGGAAAAATCCCCAGGTACCCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GDKTTAWSWSWQ*SPLGKIPRYPV Trigger: AACCGGGTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | AGGCCTGTGTCAGGAGACAAGACCACTGCATGGAGCTaGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RPVSGDKTTAWS*SWQWSPLGKIP Trigger: GGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCCTGACACAGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | AGAAGCTCAAAGGTGCAAGAGTGGCCCATGGGCAAATaGCTCATGTGGGGTATTGTCCCCTGTCCTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSSKVQEWPMGK*LMWGIVPCPEL Trigger: GAGCTCAGGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACCTTTGAGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | AGCATGGCTGCCCAGCGCCCAGCACTTAGGACTTGCTaGAGGCATGACGAACTTCCTGATGTCCTTAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SMAAQRPALRTC*RHDELPDVLSN Trigger: ATTGCTAAGGACATCAGGAAGTTCGTCATGCCTCCAGCAAGTCCTAAGTGCTGGGCGCTGGGCAGCCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | AGCAGCTGTGAATGCTTTCCCCAGAAGCAGTTCAGATaGTCTGCTGCCTCTAAGCAGCCACTAGCGCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCECFPQKQFR*SAASKQPLALA Trigger: AGCTAGCGCTAGTGGCTGCTTAGAGGCAGCAGAGCATCTGAACTGCTTCTGGGGAAAGCATTCACAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | AAGAGTGCTAGGAATGAGCAGGGCCTCCTGCCACAGTaGTGGCCTCAAAGCAAAGCTAGAAATGGTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSARNEQGLLPQ*WPQSKARNGVA Trigger: TGCCACACCATTTCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAGGCCCTGCTCATTCCTAGCACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | GAAATGCTAAAGGCCTGTGTCAGGAGACAAGACCACTaGATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EMLKACVRRQDH*MELELAMESFG Trigger: CCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCCTGACACAGGCCTTTAGCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | AGTGCTAGGAATGAGCAGGGCCTCCTGCCACAGTGCTaGCCTCAAAGCAAAGCTAGAAATGGTGTGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SARNEQGLLPQC*PQSKARNGVAS Trigger: ACTTGCCACACCATTTCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAGGCCCTGCTCATTCCTAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | CAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTaGACTCAGATGACAACTCAGGATGTCCACTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QTLGSSSVHGVK*TQMTTQDVHLN Trigger: GTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GTGTCAGGAGACAAGACCACTGCATGGAGCTGGAGCTaGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VSGDKTTAWSWS*QWSPLGKIPRY Trigger: GTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGTCTTGTCTCCTGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | TATCAAATTCCACTTCAAGGCAGGTCAGAGGGCACCTaGCCTCAGAAGAGTGGCAAGGCAGTCCTGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YQIPLQGRSEGT*PQKSGKAVLGK Trigger: CTTTCCCAGGACTGCCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGTGGCAATGGAGTCCTTaGGGAAAAATCCCCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KFHFKAGQRAPGLRRVARWQWSP*GKIPRY Trigger: GTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCA...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | TACCATGGAAGAGTGCTAGGAATGAGCAGGGCCTCCTaGCACAGTGCTGGCCTCAAAGCAAAGCTAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: YHGRVLGMSRAS*HSAGLKAKLEM Trigger: CATTTCTAGCTTTGCTTTGAGGCCAGCACTGTGGCAGGAGGCCCTGCTCATTCCTAGCACTCTTCCATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | CCCCAGGTAAAGATGGTACAGGCACTTGCTCCTCTCTaGGTGCCTGATTTCAGTTTCTATGTACACACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PQVKMVQALAPL*VPDFSFYVHTR Trigger: GCGGGTGTGTACATAGAAACTGAAATCAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCTTTACCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GTAAGCAATCATATACTCCTGTCAGCCCTGGGGACCTaGTCTGAAGATGCTCCGTATGGGAAGGGGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: VSNHILLSALGT*SEDAPYGKGKH Trigger: ATGTTTCCCCTTCCCATACGGAGCATCTTCAGACCAGGTCCCCAGGGCTGACAGGAGTATATGATTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | AAAGATGGTACAGGCACTTGCTCCTCTCTGAGTGCCTaGTTTCAGTTTCTATGTACACACCCGCAGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KDGTGTCSSLSA*FQFLCTHPQLV Trigger: CACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCACTCAGAGAGGAGCAAGTGCCTGTACCATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | TCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATaGACGGGCATGGCTAGACCCAGTGGTCATTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLPKQPFMAQIG*TGMARPSGHSP Trigger: TGGTGAATGACCACTGGGTCTAGCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | GGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTaGGCTCCTGTGAACCATTATCACCTGCAAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: GQMAHVGYCPLS*APVNHYHLQTF Trigger: AAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGACAATACCCCACATGAGCCATTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | GTAAGCAAGCCCATCCAAAGATGTACTTGGTATAAGTaGAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSKPIQRCTWYK*SPLPLLLGNVC Trigger: GCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTTGGATGGGCTTGCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | CTCATGTGGGGTATTGTCCCCTGTCCTGAGCTCCTGTaGACCATTATCACCTGCAAACATTTGGCCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: LMWGIVPCPELL*TIITCKHLATL Trigger: TAATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGACAATACCCCACATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATCACTGCCTCTGCTTCTaGGAAACGTGTGCTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDHCLCF*ETCAFN Trigger: GTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTG...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | CCATCCAAAGATGTACTTGGTATAAGTGAAGCCCACTaGCTCTGCTTCTTGGAAACGTGTGCTTTCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: PSKDVLGISEAH*LCFLETCAFNT Trigger: GGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTTGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR GCA 72 bp | AAAGATGTACTTGGTATAAGTGAAGCCCACTGCCTCTaGTTCTTGGAAACGTGTGCTTTCAACACCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KDVLGISEAHCL*FLETCAFNTCV Trigger: GACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR TCA 72 bp | ACCTCATCAAATCTTGGATTTGGGATTATTCACCAGTaGGATCTGGCAGACTCCAGTGCTTGGAACTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSNLGFGIIHQ*DLADSSAWNWN Trigger: ATTCCAGTTCCAAGCACTGGAGTCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTGATGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | CAAATCTTGGATTTGGGATTATTCACCAGTGAGATCTaGCAGACTCCAGTGCTTGGAACTGGAATAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QILDLGLFTSEI*QTPVLGTGIAI Trigger: TATTGCTATTCCAGTTCCAAGCACTGGAGTCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GGTAAAGAACACACAAACCTCATCAAATCTTGGATTTaGGATTATTCACCAGTGAGATCTGGCAGACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKEHTNLIKSWI*DYSPVRSGRLQ Trigger: CTGGAGTCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTGATGAGGTTTGTGTGTTCTTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CCA 72 bp | GGGATGGGTAAAGAACACACAAACCTCATCAAATCTTaGATTTGGGATTATTCACCAGTGAGATCTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GMGKEHTNLIKS*IWDYSPVRSGR Trigger: TCTGCCAGATCTCACTGGTGAATAATCCCAAATCCAAGATTTGATGAGGTTTGTGTGTTCTTTACCCATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACACGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTRSRRR*RSRWTM Trigger: CATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCG...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACACAATCAGGGACTCGATaGGCTCCCGGCGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTQSGTR*APGAAG Trigger: GCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTG...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTGAGGCGCCCACCCCCTaGCGGTGCTTCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCEAPTP*RCFCSW Trigger: CCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTC...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACAATCAGGGACTCGATaGGCTCCCGGCGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPQSGTR*APGAAG Trigger: GCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTG...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACCAATCAGGGACTCGATaGGCTCCCGGCGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDQSGTR*APGAAG Trigger: GCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTG...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACACCCACCCCCTGGCGGTaGTTCTGTAGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTPTPWR*FCSWGA Trigger: AGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGG...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAGCCGAAGCTCCGCTCTaGCTGGTCCCATTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTAEAPL*LVPFLG Trigger: GCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGC...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCGAGGCGCCCACCCCCTaGCGGTGCTTCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSEAPTP*RCFCSW Trigger: CCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTC...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRSLRYC*HPWGRS Trigger: TGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGA...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCGCAGGGGGCAGCGGCTaGTCCAAGTGCCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSAGGSG*SKCLGN Trigger: ATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGC...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAGGCCAGCCATCACACTaGCAGGGGAGGGGTATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTGQPSH*QGRGMH Trigger: GTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCC...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGGAGCAGCTCTCGGCGTaGCAGCTGTGGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMEQLSA*QLWRSW Trigger: CCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTC...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCAATCAGGGACTCGATaGGCTCCCGGCGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSQSGTR*APGAAG Trigger: GCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCCCCACCCCCTGGCGGTaGTTCTGTAGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRPTPWR*FCSWGA Trigger: AGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGG...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACCCCACCCCCTGGCGGTaGTTCTGTAGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDPTPWR*FCSWGA Trigger: AGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGG...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAGTTGCACCGAAGCTCTaGCCGCAGCGGCTCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRVAPKL*PQRLGD Trigger: GTCACCGAGCCGCTGCGGCCAGAGCTTCGGTGCAAC...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGCGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRRSRRR*RSRWTM Trigger: CATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCG...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQATISWG*QAGLHR Trigger: CCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGT...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSSLRYC*HPWGRS Trigger: TGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGA...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTAGGAGGAGATACAGCTaGCGACCAGGCGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCRRRYS*RPGASH Trigger: GTGGGATGCGCCTGGTCGTCAGCTGTATCTCCTCCT...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTCAAACTGCCCAGGGTTaGACCGAAGCTCTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQAQTAQG*TEALAA Trigger: TGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTG...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCGGCCAGCCATCACACTaGCAGGGGAGGGGTATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRGQPSH*QGRGMH Trigger: GTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCC...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCGAGCAGCTCTCGGCGTaGCAGCTGTGGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSEQLSA*QLWRSW Trigger: CCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTC...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAGAGCAGCTCTCGGCGTaGCAGCTGTGGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPEQLSA*QLWRSW Trigger: CCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTC...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCGCCGAAGCTCCGCTCTaGCTGGTCCCATTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSAEAPL*LVPFLG Trigger: GCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGC...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTTGGGGCTGGCAGGCTaGCCTCCACAGGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTLGLAG*PPQAQR Trigger: CCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAA...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDTISWG*QAGLHR Trigger: CCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGT...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRTISWG*QAGLHR Trigger: CCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGT...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGAGGCGCCCACCCCCTaGCGGTGCTTCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGEAPTP*RCFCSW Trigger: CCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTCTGAAGCGTACAGGCTaGGCCACGTTCACTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQALKRTG*ATFTVW Trigger: CCACACAGTGAACGTGGCTCAGCCTGTACGCTTCAG...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGSLRYC*HPWGRS Trigger: TGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGA...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAAGGAGGAGATACAGCTaGCGACCAGGCGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRRRRYS*RPGASH Trigger: GTGGGATGCGCCTGGTCGTCAGCTGTATCTCCTCCT...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAGTAGCCGGTGGACCATaGAAAGCAGCAGCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTVAGGP*KAAARG Trigger: TCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTAC...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGCAGGGGGCAGCGGCTaGTCCAAGTGCCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGAGGSG*SKCLGN Trigger: ATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR GCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACCAAACTGCCCAGGGTTaGACCGAAGCTCTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDQTAQG*TEALAA Trigger: TGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTG...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRARGGV*TGWYHR Trigger: ACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGC...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGCCCACCCCCTGGCGGTaGTTCTGTAGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGPTPWR*FCSWGA Trigger: AGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGG...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGGCCGAAGCTCCGCTCTaGCTGGTCCCATTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARAEAPL*LVPFLG Trigger: GCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGC...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGCCGAAGCTCCGCTCTaGCTGGTCCCATTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGAEAPL*LVPFLG Trigger: GCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACATGGCAGAGGCGAAGATaGGATCTGGGGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTWQRRR*DLGAGT Trigger: TGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCA...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSSACQL*RSWCLR Trigger: CCTGAGGCACCATGACCTCCACAGCTGGCACGCCGA...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCCGCTGGCGTAGCCGGTaGACCATGAAAAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQGSRVWQRKASMPQPSRWRSR*TMKSSS Trigger: GCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCG...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATCGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHRSRRR*RSRWTM Trigger: CATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCG...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTGGAGGGTCGTGGAAATaGAAAGTCCCACCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQAGGSWK*KVPPSP Trigger: CGGGGAAGGTGGGACTTTCCATTTCCACGACCCTCC...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSTISWG*QAGLHR Trigger: CCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGT...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSRCFCS*GASTLG Trigger: GCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCG...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGACGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRRCFCS*GASTLG Trigger: GCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCG...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCCTGAAGCGTACAGGCTaGGCCACGTTCACTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSLKRTG*ATFTVW Trigger: CCACACAGTGAACGTGGCTCAGCCTGTACGCTTCAG...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTSSSLH*GRPGSS Trigger: GCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACT...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGAGGAGATACAGCTaGCGACCAGGCGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSRRRYS*RPGASH Trigger: GTGGGATGCGCCTGGTCGTCAGCTGTATCTCCTCCT...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCGTAGCCGGTGGACCATaGAAAGCAGCAGCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSVAGGP*KAAARG Trigger: TCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTAC...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGCAGGGGGCAGCGGCTaGTCCAAGTGCCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVAGGSG*SKCLGN Trigger: ATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGC...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTTTGGGCATTTCCTGCTaGAGCGTACAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCLGISC*SVQAEP Trigger: TGGCTCAGCCTGTACGCTTCAGCAGGAAATGCCCAA...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCAAACTGCCCAGGGTTaGACCGAAGCTCTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSQTAQG*TEALAA Trigger: TGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTGGCCAGCCATCACACTaGCAGGGGAGGGGTATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGGQPSH*QGRGMH Trigger: GTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCC...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCGGTAGCAGCTGGCTGTaGCTTCATAGTGGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRGSSWL*LHSGAT Trigger: GGTGGCACCACTATGAAGGCACAGCCAGCTGCTACC...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTAACCAACCCAGAGCTTaGGCTGGTCTTTCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQANQPRA*AGLSSR Trigger: TCGGCTGGAAAGACCAGCGCAAGCTCTGGGTTGGTT...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAAACCAACCCAGAGCTTaGGCTGGTCTTTCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTNQPRA*AGLSSR Trigger: TCGGCTGGAAAGACCAGCGCAAGCTCTGGGTTGGTT...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGCCCACCCCCTGGCGGTaGTTCTGTAGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVPTPWR*FCSWGA Trigger: AGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGG...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGGTTGCACCGAAGCTCTaGCCGCAGCGGCTCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVEVAPKL*PQRLGD Trigger: GTCACCGAGCCGCTGCGGCCAGAGCTTCGGTGCAAC...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACTGTGTGGAAGTGTGTaGGGTCACCTCCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPLCGSV*GHLLWL Trigger: GAGCCAGAGGAGGTGACCCCACACACTTCCACACAG...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTACGAAGCGCAGCTCCTaGTCAGTGGAGAAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCTKRSS*SVEKVA Trigger: TGCTACCTTCTCCACTGACCAGGAGCTGCGCTTCGT...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSKLRSG*SHSWAR Trigger: CCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTT...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAGGCGAAGATGGGATCTaGGGGCAGGAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPGEDGI*GQEHFW Trigger: CCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCC...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTGGCAGAGGCGAAGATaGGATCTGGGGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSWQRRR*DLGAGT Trigger: TGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCA...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMGKWKH*SWAQNT Trigger: CGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCC...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQAGKWKH*SWAQNT Trigger: CGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCC...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACAGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTGKWKH*SWAQNT Trigger: CGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCC...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTCAGCTGTGGAGGTCATaGTGCCTCAGGGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCQLWRS*CLRVGK Trigger: CTTTCCTACCCTGAGGCACCATGACCTCCACAGCTG...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTCAGCTGTGGAGGTCATaGTGCCTCAGGGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQAQLWRS*CLRVGK Trigger: CTTTCCTACCCTGAGGCACCATGACCTCCACAGCTG...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGSACQL*RSWCLR Trigger: CCTGAGGCACCATGACCTCCACAGCTGGCACGCCGA...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGTCAGGCTCCCCTCGATaGCAGGTACAGCTCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMSGSPR*QVQLKH Trigger: ATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGA...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCGCTGGCGTAGCCGGTaGACCATGAAAAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSRWRSR*TMKSSS Trigger: GCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSRCFCS*GASTLG Trigger: GCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACGTGGTGCCACCCACTTaGGCATTTCCTGCTGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDVVPPT*AFPAEA Trigger: CGCTTCAGCAGGAAATGCCCAAGTGGGTGGCACCAC...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQGSRVWQRKASMPQPSSSSLH*GRPGSS Trigger: GCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACT...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGAGGAGGAGATACAGCTaGCGACCAGGCGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGRRRYS*RPGASH Trigger: GTGGGATGCGCCTGGTCGTCAGCTGTATCTCCTCCT...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR TCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMKDVVA*GLCQTH Trigger: ATGGGTTTGGCACAGGCCTCACGCCACTACATCTTT...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR GCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGARGGV*TGWYHR Trigger: ACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGC...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCTGGAGTCAAACAGGCTaGTGCCATCTGGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTWSQTG*CHLGPD Trigger: GTCTGGACCCAGATGGCAGCAGCCTGTTTGACTCCA...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCTGGAGTCAAACAGGCTaGTGCCATCTGGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRWSQTG*CHLGPD Trigger: GTCTGGACCCAGATGGCAGCAGCCTGTTTGACTCCA...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMAMHLQ*HHLLGL Trigger: CAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGC...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR GCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCAMHLQ*HHLLGL Trigger: CAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGC...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCAGACCCGGTAGCAGCTaGCTGTGCCTTCATAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSRPGSS*LCLHSG Trigger: ACCACTATGAAGGCACAGCCAGCTGCTACCGGGTCT...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCAGACCCGGTAGCAGCTaGCTGTGCCTTCATAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTRPGSS*LCLHSG Trigger: ACCACTATGAAGGCACAGCCAGCTGCTACCGGGTCT...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCACGAAGCGCAGCTCCTaGTCAGTGGAGAAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSTKRSS*SVEKVA Trigger: TGCTACCTTCTCCACTGACCAGGAGCTGCGCTTCGT...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGKLRSG*SHSWAR Trigger: CCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTT...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCGGCGAAGATGGGATCTaGGGGCAGGAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSGEDGI*GQEHFW Trigger: CCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCC...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACATGGAAACACTGGAGCTaGGCGCAGAACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTWKHWS*AQNTLS Trigger: TGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCA...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LADTGLQQCSRGEVDSDDGKWKH*SWAQNT Trigger: CGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCC...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSGKWKH*SWAQNT Trigger: CGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCC...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGACAGCTGTGGAGGTCATaGTGCCTCAGGGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRQLWRS*CLRVGK Trigger: CTTTCCTACCCTGAGGCACCATGACCTCCACAGCTG...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVSACQL*RSWCLR Trigger: CCTGAGGCACCATGACCTCCACAGCTGGCACGCCGA...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCGCTGGCGTAGCCGGTaGACCATGAAAAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGRWRSR*TMKSSS Trigger: GCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVETISWG*QAGLHR Trigger: CCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGT...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGRCFCS*GASTLG Trigger: GCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTGAGGCGCCCACCCCCTaGCGGTGCTTCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSEAPTP*RCFCSW Trigger: CCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTC...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGCTGAAGCGTACAGGCTaGGCCACGTTCACTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARLKRTG*ATFTVW Trigger: CCACACAGTGAACGTGGCTCAGCCTGTACGCTTCAG...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSSLRYC*HPWGRS Trigger: TGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGA...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTGTAGCCGGTGGACCATaGAAAGCAGCAGCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGVAGGP*KAAARG Trigger: TCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTAC...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGTAGCCGGTGGACCATaGAAAGCAGCAGCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGVAGGP*KAAARG Trigger: TCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTAC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTGCAGGGGGCAGCGGCTaGTCCAAGTGCCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSAGGSG*SKCLGN Trigger: ATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGC...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCGGCCAGCCATCACACTaGCAGGGGAGGGGTATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSAGQPSH*QGRGMH Trigger: GTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCC...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTGGTAGCAGCTGGCTGTaGCTTCATAGTGGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGGSSWL*LHSGAT Trigger: GGTGGCACCACTATGAAGGCACAGCCAGCTGCTACC...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCACGCTGACAGGTCTGTaGAGCATCCCAGTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSTLTGL*SIPVVL Trigger: GAGAACTACTGGGATGCTGCACAGACCTGTCAGCGT...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAACGCTGACAGGTCTGTaGAGCATCCCAGTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPTLTGL*SIPVVL Trigger: GAGAACTACTGGGATGCTGCACAGACCTGTCAGCGT...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAACCAACCCAGAGCTTaGGCTGGTCTTTCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSNQPRA*AGLSSR Trigger: TCGGCTGGAAAGACCAGCGCAAGCTCTGGGTTGGTT...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCTGGAGTCAAACAGGCTaGTGCCATCTGGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSWSQTG*CHLGPD Trigger: GTCTGGACCCAGATGGCAGCAGCCTGTTTGACTCCA...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAQGSRVWQRKASMPQPSAMHLQ*HHLLGL Trigger: CAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGC...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRAMHLQ*HHLLGL Trigger: CAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGC...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCAGCTGTGGAGGTCATaGTGCCTCAGGGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSQLWRS*CLRVGK Trigger: CTTTCCTACCCTGAGGCACCATGACCTCCACAGCTG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGCGCTGGCGTAGCCGGTaGACCATGAAAAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRRWRSR*TMKSSS Trigger: GCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCG...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | AAAGATGTACTTGGTATAAGTGAAGCCCACTGCCTCTGCTTCTTGGAAACGTGTCGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: KDVLGISEAHCLCFLETCRSRRR*RSRWTM Trigger: CATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCG...ACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTATTGGGGCTGGCAGGCTaGCCTCCACAGGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVLGLAG*PPQAQR Trigger: CCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAA...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVERCFCS*GASTLG Trigger: GCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCG...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGGTGGTGCCACCCACTTaGGCATTTCCTGCTGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARVVPPT*AFPAEA Trigger: CGCTTCAGCAGGAAATGCCCAAGTGGGTGGCACCAC...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| 3UTR CAA 72 bp | ACCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTaGGGAAAAATCCCCAGGTACCCGGTTGCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTAWSWSWQWSP*GKIPRYPVAVE Trigger: CTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CAA 72 bp | TTTTGGGTGGCCTGGCACCAACACAATTCCCAATTGTaGCTCTGGAGCATGGCTGCCCAGCGCCCAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FWVAWHQHNSQL*LWSMAAQRPAL Trigger: AAGTGCTGGGCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGCCACCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGTAGCCGGTGGACCATaGAAAGCAGCAGCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVVAGGP*KAAARG Trigger: TCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTAC...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR GCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSAARGGV*TGWYHR Trigger: ACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGC...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGTAGCAGCTGGCTGTaGCTTCATAGTGGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRGSSWL*LHSGAT Trigger: GGTGGCACCACTATGAAGGCACAGCCAGCTGCTACC...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCGAGCAGCTCTCGGCGTaGCAGCTGTGGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGEQLSA*QLWRSW Trigger: CCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTC...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACACGACCTTCTAAGGAATaGTTCCGGCCAGTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: THPQLVGMWQWSRVQAMTRPSKE*FRPVMT Trigger: TGTCATTACTGGCCGGAACCATTCCTTAGAAGGTCG...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGCGACCTTCTAAGGAATaGTTCCGGCCAGTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMRPSKE*FRPVMT Trigger: TGTCATTACTGGCCGGAACCATTCCTTAGAAGGTCG...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTCGACCTTCTAAGGAATaGTTCCGGCCAGTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCRPSKE*FRPVMT Trigger: TGTCATTACTGGCCGGAACCATTCCTTAGAAGGTCG...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGTGGCAGAGGCGAAGATaGGATCTGGGGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVWQRRR*DLGAGT Trigger: TGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCA...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGCTCAGGGTAGGAAAGTaGAAACACTGGAGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARLRVGK*KHWSWA Trigger: CGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAG...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCCAGGCTGCTGCCATCTaGGTCCAGACACATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSQAAAI*VQTHEF Trigger: AAATTCATGTGTCTGGACCCAGATGGCAGCAGCCTG...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTGTGCCAAACCCATCTaGACCATAGTCAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GARVAHGQMAHVGYCPLSCAKPI*TIVKAR Trigger: CCTGGCTTTGACTATGGTCCAGATGGGTTTGGCACA...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGATGTGCCAAACCCATCTaGACCATAGTCAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRCAKPI*TIVKAR Trigger: CCTGGCTTTGACTATGGTCCAGATGGGTTTGGCACA...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CAA 72 bp | AATGGAGTCCTTTGGGAAAAATCCCCAGGTACCCGGTaGCTGTGGAGGGACTGGGAGGCATGTATGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGVLWEKSPGTR*LWRDWEACMWL Trigger: CAGCCACATACATGCCTCCCAGTCCCTCCACAGCAACCGGGTACCTGGGGATTTTTCCCAAAGGACTCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCCTGAAGCGTACAGGCTaGGCCACGTTCACTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSALKRTG*ATFTVW Trigger: CCACACAGTGAACGTGGCTCAGCCTGTACGCTTCAG...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCCAAACTGCCCAGGGTTaGACCGAAGCTCTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGQTAQG*TEALAA Trigger: TGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTG...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGACGCTGACAGGTCTGTaGAGCATCCCAGTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARTLTGL*SIPVVL Trigger: GAGAACTACTGGGATGCTGCACAGACCTGTCAGCGT...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGGAAATGGTGCAAGTTTaGTCCAATCAGGGACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMEMVQV*SNQGLD Trigger: ATCGAGTCCCTGATTGGAGCAAACTTGCACCATTTC...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGCCAAGGTTGAAATGGTaGAAGTTTGCTCCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMPRLKW*KFAPIR Trigger: CCTGATTGGAGCAAACTTGCACCATTTCAACCTTGG...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGAMHLQ*HHLLGL Trigger: CAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGAGACCCGGTAGCAGCTaGCTGTGCCTTCATAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVRPGSS*LCLHSG Trigger: ACCACTATGAAGGCACAGCCAGCTGCTACCGGGTCT...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHKLRSG*SHSWAR Trigger: CCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTT...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCCGACCTTCTAAGGAATaGTTCCGGCCAGTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TGMARPSGHSPASRAQGSRPSKE*FRPVMT Trigger: TGTCATTACTGGCCGGAACCATTCCTTAGAAGGTCG...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGCTCAGGGTAGGAAAGTaGAAACACTGGAGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRLRVGK*KHWSWA Trigger: CGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAG...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGCTCAGGGTAGGAAAGTaGAAACACTGGAGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVELRVGK*KHWSWA Trigger: CGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAG...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGGAGGTGGAGGGTCGTaGAAATGGAAAGTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVGGGGS*KWKVPP Trigger: AGGTGGGACTTTCCATTTCCACGACCCTCCACCTCC...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGCACCAACACAATTCCCAATTGTTGCTCTGGAGCATGGCTGCCCAGCGCAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWHQHNSQLLLWSMAAQRSCIRR*RVVEME Trigger: TTCCATTTCCACGACCCTCCACCTCCTTATACAGCT...GCGCTGGGCAGCCATGCTCCAGAGCAACAATTGGGAATTGTGTTGGTGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPSCIRR*RVVEME Trigger: TTCCATTTCCACGACCCTCCACCTCCTTATACAGCT...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCACGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPRLVHV*VLVSCI Trigger: TATACAGCTTACAAGTACCCAGACATGGACCAGCCG...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGACTGGGAGGCATGTATGTGGCTGGCAGACACTGGGCTCCAGCAGTGTGTAGAACACACTGTCTaGGTTGATAGACGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: WRDWEACMWLADTGLQQCVEHTV*VDRRLI Trigger: TATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC...ACACTGCTGGAGCCCAGTGTCTGCCAGCCACATACATGCCTCCCAGTCCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTGTAGAACACACTGTCTaGGTTGATAGACGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LCTHPQLVGMWQWSRVQAVEHTV*VDRRLI Trigger: TATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC...AGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| 3UTR CAA 72 bp | CTCCTGAGGCACTGCTGTGTGGTCCTTAGGGCTCTTTaGGGTGGCCTGGCACCAACACAATTCCCAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHCCVVLRAL*GGLAPTQFPIV Trigger: AACAATTGGGAATTGTGTTGGTGCCAGGCCACCCAAAAGAGCCCTAAGGACCACACAGCAGTGCCTCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSASSSLH*GRPGSS Trigger: GCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACT...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVSSSLH*GRPGSS Trigger: GCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACT...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVKDVVA*GLCQTH Trigger: ATGGGTTTGGCACAGGCCTCACGCCACTACATCTTT...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR TCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRKDVVA*GLCQTH Trigger: ATGGGTTTGGCACAGGCCTCACGCCACTACATCTTT...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGACGCTGACAGGTCTGTaGAGCATCCCAGTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRTLTGL*SIPVVL Trigger: GAGAACTACTGGGATGCTGCACAGACCTGTCAGCGT...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCAACCAACCCAGAGCTTaGGCTGGTCTTTCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSANQPRA*AGLSSR Trigger: TCGGCTGGAAAGACCAGCGCAAGCTCTGGGTTGGTT...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTATGGAGTCAAACAGGCTaGTGCCATCTGGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVWSQTG*CHLGPD Trigger: GTCTGGACCCAGATGGCAGCAGCCTGTTTGACTCCA...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR GCA 90 bp | CCTAGGAGCCTGTCCCTCTGGGGCCTTGCGGGATGGGTAAAGAACACACAAACCGAAATGGTGCAAGTTTaGTCCAATCAGGGACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLSLWGLAGWVKNTQTEMVQV*SNQGLD Trigger: ATCGAGTCCCTGATTGGAGCAAACTTGCACCATTTC...GGTTTGTGTGTTCTTTACCCATCCCGCAAGGCCCCAGAGGGACAGGCTCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAGAAATGGTGCAAGTTTaGTCCAATCAGGGACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPEMVQV*SNQGLD Trigger: ATCGAGTCCCTGATTGGAGCAAACTTGCACCATTTC...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGGTTGCACCGAAGCTCTaGCCGCAGCGGCTCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMVAPKL*PQRLGD Trigger: GTCACCGAGCCGCTGCGGCCAGAGCTTCGGTGCAAC...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | TCCCCTGTCCTGAGCTCCTGTGAACCATTATCACCTGCAAACATTTGGCCACATTGGCAGAGGCGAAGATaGGATCTGGGGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLSSCEPLSPANIWPHWQRRR*DLGAGT Trigger: TGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCA...ATGTGGCCAAATGTTTGCAGGTGATAATGGTTCACAGGAGCTCAGGACAGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGTGGAAACACTGGAGCTaGGCGCAGAACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRWKHWS*AQNTLS Trigger: TGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCA...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCCAGCTGTGGAGGTCATaGTGCCTCAGGGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSAQLWRS*CLRVGK Trigger: CTTTCCTACCCTGAGGCACCATGACCTCCACAGCTG...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTATCAGGCTCCCCTCGATaGCAGGTACAGCTCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVSGSPR*QVQLKH Trigger: ATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGA...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCAGGCTGCTGCCATCTaGGTCCAGACACATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGQAAAI*VQTHEF Trigger: AAATTCATGTGTCTGGACCCAGATGGCAGCAGCCTG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTGTGCCAAACCCATCTaGACCATAGTCAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGCAKPI*TIVKAR Trigger: CCTGGCTTTGACTATGGTCCAGATGGGTTTGGCACA...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTGGAGGGTCGTGGAAATaGAAAGTCCCACCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSGGSWK*KVPPSP Trigger: CGGGGAAGGTGGGACTTTCCATTTCCACGACCCTCC...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATGGAGGGTCGTGGAAATaGAAAGTCCCACCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHGGSWK*KVPPSP Trigger: CGGGGAAGGTGGGACTTTCCATTTCCACGACCCTCC...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCAGTAGAACACACTGTCTaGGTTGATAGACGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: EHRDPECGREKPACPNPPVEHTV*VDRRLI Trigger: TATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC...TGGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CCA 90 bp | CGGACAGGAAGCCCCCAGAGAGCCAGTACAGCAGCTGTGAATGCTTTCCCCAGAGTAGAACACACTGTCTaGGTTGATAGACGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RTGSPQRASTAAVNAFPRVEHTV*VDRRLI Trigger: TATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC...TCTGGGGAAAGCATTCACAGCTGCTGTACTGGCTCTCTGGGGGCTTCCTGTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTGGTACCACCGTGACATaGAAACTGCCCAGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSGTTVT*KLPRVA Trigger: TGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACC...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCTGGGGAGCCTTTGAATaGCACTTCCCAGCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGWGAFE*HFPATF Trigger: GAAGGTCGCTGGGAAGTGGCATTCAAAGGCTCCCCA...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCTGGGGAGCCTTTGAATaGCACTTCCCAGCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPTASASWKRVLSTPVSFWGAFE*HFPATF Trigger: GAAGGTCGCTGGGAAGTGGCATTCAAAGGCTCCCCA...GAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCCCAAGGTTGAAATGGTaGAAGTTTGCTCCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVHTRSWWGCGSGVGSPRLKW*KFAPIR Trigger: CCTGATTGGAGCAAACTTGCACCATTTCAACCTTGG...GGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCACGAAGCGCAGCTCCTaGTCAGTGGAGAAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPTASASWKRVLSTPVSFTKRSS*SVEKVA Trigger: TGCTACCTTCTCCACTGACCAGGAGCTGCGCTTCGT...GAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KFHFKAGQRAPGLRRVARCHSQT*QRRRWD Trigger: ATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACA...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATCTCAGGGTAGGAAAGTaGAAACACTGGAGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHLRVGK*KHWSWA Trigger: CGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAG...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDSACQL*RSWCLR Trigger: CCTGAGGCACCATGACCTCCACAGCTGGCACGCCGA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGCAGGCTGCTGCCATCTaGGTCCAGACACATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRQAAAI*VQTHEF Trigger: AAATTCATGTGTCTGGACCCAGATGGCAGCAGCCTG...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCGGAGGTGGAGGGTCGTaGAAATGGAAAGTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KPTASASWKRVLSTPVSFGGGGS*KWKVPP Trigger: AGGTGGGACTTTCCATTTCCACGACCCTCCACCTCC...GAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTGGAGGTGGAGGGTCGTaGAAATGGAAAGTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSGGGGS*KWKVPP Trigger: AGGTGGGACTTTCCATTTCCACGACCCTCCACCTCC...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGCATGGAGCTGGAGCTGGCAATGGAGTCCTTTGGGAAAAATCCCCAGGTCGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PLHGAGAGNGVLWEKSPGRLVHV*VLVSCI Trigger: TATACAGCTTACAAGTACCCAGACATGGACCAGCCG...ACCTGGGGATTTTTCCCAAAGGACTCCATTGCCAGCTCCAGCTCCATGCAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTTGGGGCTGGCAGGCTaGCCTCCACAGGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDLGLAG*PPQAQR Trigger: CCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGAGGAGGAGATACAGCTaGCGACCAGGCGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMRRRYS*RPGASH Trigger: GTGGGATGCGCCTGGTCGTCAGCTGTATCTCCTCCT...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGKDVVA*GLCQTH Trigger: ATGGGTTTGGCACAGGCCTCACGCCACTACATCTTT...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAAGCAGGGGGCAGCGGCTaGTCCAAGTGCCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLETCAFNTCVIPPFKEAGGSG*SKCLGN Trigger: ATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGC...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMARGGV*TGWYHR Trigger: ACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGC...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGGAAATGGTGCAAGTTTaGTCCAATCAGGGACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGEMVQV*SNQGLD Trigger: ATCGAGTCCCTGATTGGAGCAAACTTGCACCATTTC...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMKLRSG*SHSWAR Trigger: CCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTT...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVECHSQT*QRRRWD Trigger: ATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACA...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTTGGAAACACTGGAGCTaGGCGCAGAACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSWKHWS*AQNTLS Trigger: TGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCA...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LISVSMYTPAAGGDVAVESCIRR*RVVEME Trigger: TTCCATTTCCACGACCCTCCACCTCCTTATACAGCT...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGCGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVRLVHV*VLVSCI Trigger: TATACAGCTTACAAGTACCCAGACATGGACCAGCCG...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTCCCTAGGAAGCTGCTaGAGCGTACAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDSLGSC*SVQAEP Trigger: TGGCTCAGCCTGTACGCTTCAGCAGCTTCCTAGGGA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGCCAAGGTTGAAATGGTaGAAGTTTGCTCCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLISVSMYTPAAGGDVAVPRLKW*KFAPIR Trigger: CCTGATTGGAGCAAACTTGCACCATTTCAACCTTGG...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGCTGTGTGGAAGTGTGTaGGGTCACCTCCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMLCGSV*GHLLWL Trigger: GAGCCAGAGGAGGTGACCCCACACACTTCCACACAG...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTACTTGGTATAAGTGAAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGGCGAAGATGGGATCTaGGGGCAGGAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDVLGISEAHCLCFLETCGEDGI*GQEHFW Trigger: CCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCC...ACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGGGCGAAGATGGGATCTaGGGGCAGGAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMGEDGI*GQEHFW Trigger: CCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCC...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATCAGGCTGCTGCCATCTaGGTCCAGACACATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHQAAAI*VQTHEF Trigger: AAATTCATGTGTCTGGACCCAGATGGCAGCAGCCTG...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | CACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATTCTTGTGCCAAACCCATCTaGACCATAGTCAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGVKWTQMTTQDVHLNHSCAKPI*TIVKAR Trigger: CCTGGCTTTGACTATGGTCCAGATGGGTTTGGCACA...AGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCCGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: WAQTWGRLSVSNHILLSARLVHV*VLVSCI Trigger: TATACAGCTTACAAGTACCCAGACATGGACCAGCCG...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGTTGGGCATTTCCTGCTaGAGCGTACAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMLGISC*SVQAEP Trigger: TGGCTCAGCCTGTACGCTTCAGCAGGAAATGCCCAA...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066127.13 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGTGGGGAGCCTTTGAATaGCACTTCCCAGCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMWGAFE*HFPATF Trigger: GAAGGTCGCTGGGAAGTGGCATTCAAAGGCTCCCCA...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTACCAAGGTTGAAATGGTaGAAGTTTGCTCCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVPRLKW*KFAPIR Trigger: CCTGATTGGAGCAAACTTGCACCATTTCAACCTTGG...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAGGATGAACGGGCATGGCTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSSQTTLYGTDRMNGHGCHSQT*QRRRWD Trigger: ATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACA...GCCATGCCCGTTCATCCTATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGTCAGGCTCCCCTCGATaGCAGGTACAGCTCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMSGSPR*QVQLKH Trigger: ATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGA...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGGGAGGTGGAGGGTCGTaGAAATGGAAAGTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMGGGGS*KWKVPP Trigger: AGGTGGGACTTTCCATTTCCACGACCCTCCACCTCC...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHSCIRR*RVVEME Trigger: TTCCATTTCCACGACCCTCCACCTCCTTATACAGCT...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCACTGCCTCTGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPTASASWKRVLSTPVSFSCIRR*RVVEME Trigger: TTCCATTTCCACGACCCTCCACCTCCTTATACAGCT...GAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGTAGAACACACTGTCTaGGTTGATAGACGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DFSFYVHTRSWWGCGSGVVEHTV*VDRRLI Trigger: TATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC...TACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDKDVVA*GLCQTH Trigger: ATGGGTTTGGCACAGGCCTCACGCCACTACATCTTT...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAAGGTAGCAGCTGGCTGTaGCTTCATAGTGGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CFLETCAFNTCVIPPFKEGSSWL*LHSGAT Trigger: GGTGGCACCACTATGAAGGCACAGCCAGCTGCTACC...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGTGGAAACACTGGAGCTaGGCGCAGAACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMWKHWS*AQNTLS Trigger: TGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCA...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTGGAAACACTGGAGCTaGGCGCAGAACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDWKHWS*AQNTLS Trigger: TGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAAACGAAGCGCAGCTCCTaGTCAGTGGAGAAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFLETCAFNTCVIPPFKETKRSS*SVEKVA Trigger: TGCTACCTTCTCCACTGACCAGGAGCTGCGCTTCGT...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAAGGAGGTGGAGGGTCGTaGAAATGGAAAGTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLETCAFNTCVIPPFKEGGGGS*KWKVPP Trigger: AGGTGGGACTTTCCATTTCCACGACCCTCCACCTCC...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| 3UTR CAA 72 bp | GTACTTGGTATAAGTGAAGCCCACTGCCTCTGCTTCTaGGAAACGTGTGCTTTCAACACCTGTGTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGISEAHCLCF*ETCAFNTCVIP Trigger: TGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTACTTGGTATAAGTGAAGCCCACTGCCTCTGCTTCTTGGAAACGTGTTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KDVLGISEAHCLCFLETCCHSQT*QRRRWD Trigger: ATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACA...ACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| 3UTR CAA 72 bp | GTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTaGAACCATTCTCTTCCCAAACAACCCTTTATGGCA | + |
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Preference number: 4 (lower is better) Translates to: VKWTQMTTQDVH*NHSLPKQPFMA Trigger: TGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | ACCTGTGTCATTCCACCATTTAAAGAAGAGACTAACAGCCCCCAGGTAAAGATGCCAAGGTTGAAATGGTaGAAGTTTGCTCCAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: TCVIPPFKEETNSPQVKMPRLKW*KFAPIR Trigger: CCTGATTGGAGCAAACTTGCACCATTTCAACCTTGG...CATCTTTACCTGGGGGCTGTTAGTCTCTTCTTTAAATGGTGGAATGACACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR GCA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAATGGAGTCAAACAGGCTaGTGCCATTTCTTTTACACA | + |
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Preference number: 4 (lower is better) Translates to: CFLETCAFNTCVIPPFKEWSQTG*CHFFYT Trigger: TGTGTAAAAGAAATGGCAGCAGCCTGTTTGACTCCA...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066127.13 |
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| CDS CCA 90 bp | GGAAGCACGGGGGAGGCGCCCACCCCCTGGCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGCGGGATCAGGAGGCACCAGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GSTGEAPTPWRCFCS*GASTLGGIRRHQQG Trigger: GCCCTGCTGGTGCCTCCTGATCCCGCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTCCCCCGTGCTTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | CGCCCACCCCCTGGCGGTGCTTCTGTAGCTGGGGTGCTTCCACTCTaGGCGGGATCAGGAGGCACCAGCAGGGCACTGCTACTGTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: RPPPGGASVAGVLPL*AGSGGTSRALLLSV Trigger: TACAGACAGTAGCAGTGCCCTGCTGGTGCCTCCTGATCCCGCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS GCA 90 bp | ACACTGCCAGGGGAGGGGTATGCACTGGATGGTACCACCGTGACATaGAAACTGCCCAGGGTTGCACCGAAGCTCTGGCCGCAGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPGEGYALDGTTVT*KLPRVAPKLWPQRL Trigger: GAGCCGCTGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS GCA 90 bp | CAGGGGGCAGCGGCTGATCCAAGTGCCTGGGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTGGCAGGCTGGCCTCCACAGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QGAAADPSAWAMHLQ*HHLLGLAGWPPQAQ Trigger: TTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS GCA 90 bp | GGATGTCTCTGCAGGGGGCAGCGGCTGATCCAAGTGCCTGGGCAATaGACCTTCAATGCCACCATCTCTTGGGGCTGGCAGGCTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCLCRGQRLIQVPGQ*TFNATISWGWQAGL Trigger: GAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGCAGAGACATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | ACCCAGAGCTTGCGCTGGTCTTTCCAGCCGAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGGACGAAGCGCAGCTCCTGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQSLRWSFQPKLRSG*SHSWARTKRSSWSV Trigger: CACTGACCAGGAGCTGCGCTTCGTCCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGCTGGAAAGACCAGCGCAAGCTCTGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS TCA 90 bp | CCATCACACTGCCAGGGGAGGGGTATGCACTGGATGGTACCACCGTaGCATGCAAACTGCCCAGGGTTGCACCGAAGCTCTGGCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSHCQGRGMHWMVPP*HANCPGLHRSSGRS Trigger: GCTGCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | TGCAAGTTTGCTCCAATCAGGGACTCGATGCGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATGAAAAGCAGCAGCGAGAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CKFAPIRDSMRSRRR*RSRWTMKSSSERMR Trigger: CCTCATCCTCTCGCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTGGAGCAAACTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | TGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CTHPQLVGMWQWSRVQAMQCHHL*GLAGWP Trigger: AGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTG...CATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | CTGCTAAGGATGTCTCTGCAGGGGGCAGCGGCTGATCCAAGTGCCTaGGCAATGCACCTTCAATGCCACCATCTCTTGGGGCTGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LLRMSLQGAAADPSA*AMHLQCHHLLGLAG Trigger: GCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGCAGAGACATCCTTAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GARVAHGQMAHVGYCPLSQCHHL*GLAGWP Trigger: AGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTG...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | ACGTTGGCCAGCCATCACACTGCCAGGGGAGGGGTATGCACTGGATaGTACCACCGTGACATGCAAACTGCCCAGGGTTGCACCGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: TLASHHTARGGVCTG*YHRDMQTAQGCTEA Trigger: AGCTTCGGTGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | GCTGAGCCACGTTCACTGTGTGGAAGTGTGTGGGGTCACCTCCTCTaGCTCGCCCCTGCCGCAGATCCACAGTTTCCTTCCCATAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AEPRSLCGSVWGHLL*LAPAADPQFPSHKD Trigger: GTCCTTATGGGAAGGAAACTGTGGATCTGCGGCAGGGGCGAGCCAGAGGAGGTGACCCCACACACTTCCACACAGTGAACGTGGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | GGCCGCTCACACAGGGCAGCAACACACATCTCAGGCTCCCCTCGATaGCAGGTACAGCTCAAGCATGGGTCATCTCCCTTGGGAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GRSHRAATHISGSPR*QVQLKHGSSPLGVK Trigger: CTTCACTCCCAAGGGAGATGACCCATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGAGATGTGTGTTGCTGCCCTGTGTGAGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | CAAGTGCCTGGGCAATGCACCTTCAATGCCACCATCTCTTGGGGCTaGCAGGCTGGCCTCCACAGGCTCAAAGGCATCGTCATCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVPGQCTFNATISWG*QAGLHRLKGIVICR Trigger: CCTGCAGATGACGATGCCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | AAATTCCACTTCAAGGCAGGTCAGAGGGCACCTGGCCTCAGAAGAGTGGCAAGGGCAAACTGCCCAGGGTaGCACCGAAGCTCTGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KFHFKAGQRAPGLRRVARANCPG*HRSSGR Trigger: GCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGC...CCTTGCCACTCTTCTGAGGCCAGGTGCCCTCTGACCTGCCTTGAAGTGGAATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS GCA 90 bp | TATCCTCACACGTTGGCCAGCCATCACACTGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGTGACATGCAAACTGCCCAGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: YPHTLASHHTARGGV*TGWYHRDMQTAQGC Trigger: GCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | TGGGCAATGCACCTTCAATGCCACCATCTCTTGGGGCTGGCAGGCTaGCCTCCACAGGCTCAAAGGCATCGTCATCTGCAGGGTCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: WAMHLQCHHLLGLAG*PPQAQRHRHLQGRR Trigger: TCTACGACCCTGCAGATGACGATGCCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | CTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGGCAAACTGCCCAGGGTaGCACCGAAGCTCTGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LISVSMYTPAAGGDVAVEANCPG*HRSSGR Trigger: GCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGC...CTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGCAAACTGCCCAGGGTaGCACCGAAGCTCTGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRANCPG*HRSSGR Trigger: GCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGC...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCAGTGGTGCCACCCACTaGGGCATTTCCCTAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GARVAHGQMAHVGYCPLSSGATH*GISLGS Trigger: GCTTCCTAGGGAAATGCCCAAGTGGGTGGCACCACT...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 |
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| CDS TCA 90 bp | TCACACGCTGACAGGTCTGTGCAGCATCCCAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGCTGGCTGTGCCTTCATAGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SHADRSVQHPSSSLH*GRPGSSWLCLHSGA Trigger: GGCACCACTATGAAGGCACAGCCAGCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACTGGGATGCTGCACAGACCTGTCAGCGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | GGAAACACTGGAGCTGGGCGCAGAACACGTTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGATCTGGGGGCAGGAACACTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GNTGAGRRTRCHSQT*QRRRWDLGAGTLLG Trigger: CCCCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTCAGACATGGGGCAGACTATCCGTAAGCAATCATATACTCCTGTCAGCCGCAAACTGCCCAGGGTaGCACCGAAGCTCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WAQTWGRLSVSNHILLSAANCPG*HRSSGR Trigger: GCGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGC...GGCTGACAGGAGTATATGATTGCTTACGGATAGTCTGCCCCATGTCTGAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLISVSMYTPAAGGDVAVQCHHL*GLAGWP Trigger: AGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTG...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | CACAGAAACGAAGACTTCTCAGAGCAGCTCTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGGGTAGGAAAGTGGAAACACTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRNEDFSEQLSACQL*RSWCLRVGKWKHWS Trigger: GCTCCAGTGTTTCCACTTTCCTACCCTGAGGCACCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTCTGAGAAGTCTTCGTTTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | TCCAGTCACTGGACAGTCGGCTTCATCACTCTTATCCTCACACGTTaGCCAGCCATCACACTGCCAGGGGAGGGGTATGCACTGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHWTVGFITLILTR*PAITLPGEGYALDG Trigger: ACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCAGTGACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117082.2 |
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| CDS-3UTR CAA 90 bp | CTGGCAGACACTGGGCTCCAGCAGTGTTCACGGGGTGAAGTGGACTCAGATGACTGGGCGCAGAACACGTaGTCATTCTCAGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LADTGLQQCSRGEVDSDDWAQNT*SFSDMA Trigger: TGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCA...GTCATCTGAGTCCACTTCACCCCGTGAACACTGCTGGAGCCCAGTGTCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | GGTGCAAGAGTGGCCCATGGGCAAATGGCTCATGTGGGGTATTGTCCCCTGTCCTGGGCGCAGAACACGTaGTCATTCTCAGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GARVAHGQMAHVGYCPLSWAQNT*SFSDMA Trigger: TGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCA...GGACAGGGGACAATACCCCACATGAGCCATTTGCCCATGGGCCACTCTTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS TCA 90 bp | AGACACATGAATTTGCAGCATTCCTTAGGGTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCACACAGGGCAGCAACACACATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RHMNLQHSLGSLRYC*HPWGRSHRAATHIS Trigger: TGAGATGTGTGTTGCTGCCCTGTGTGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGACCCTAAGGAATGCTGCAAATTCATGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | AGTCACTTCTGGACAGTCGGCTTCATCACTCTTATCCTCACACGTTaGCCAGCCATCACACTGCCAGGGGAGGGGTATGCACTGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHFWTVGFITLILTR*PAITLPGEGYALDG Trigger: ACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCAGAAGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGAGTGGTGCCACCCACTaGGGCATTTCCCTAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQFLCTHPQLVGMWQWSRSGATH*GISLGS Trigger: GCTTCCTAGGGAAATGCCCAAGTGGGTGGCACCACT...CCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 |
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| CDS-3UTR CAA 90 bp | ACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTCCAGGCTATGACATCCAGACACATGAATTaGCAGCATTCCTTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: THPQLVGMWQWSRVQAMTSRHMN*QHSLGS Trigger: GGACCCTAAGGAATGCTGCAAATTCATGTGTCTGGA...TGTCATAGCCTGGACCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | GTTCACGGGGTGAAGTGGACTCAGATGACAACTCAGGATGTCCACTTGAACCATCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHGVKWTQMTTQDVHLNHQCHHL*GLAGWP Trigger: AGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTG...ATGGTTCAAGTGGACATCCTGAGTTGTCATCTGAGTCCACTTCACCCCGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS TCA 90 bp | AATGGAAAGTCCCACCTTCCCCGTCGTCAGAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCATCTGGACCATAGTCAAAGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NGKSHLPRRQKDVVA*GLCQTHLDHSQSQG Trigger: TCCCTGGCTTTGACTATGGTCCAGATGGGTTTGGCACAGGCCTCACGCCACTACATCTTTCTGACGACGGGGAAGGTGGGACTTTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | GAACACGTTGTCATTCTCAGACATGGCAGAGGCGAAGATGGGATCTaGGGGCAGGAACACTTCTGGGGAGCCTTTGAATGCCACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EHVVILRHGRGEDGI*GQEHFWGAFECHFP Trigger: TGGGAAGTGGCATTCAAAGGCTCCCCAGAAGTGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACAACGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | AACACACATCTCAGGCTCCCCTCGATGGCAGGTACAGCTCAAGCATaGGTCATCTCCCTTGGGAGTGAAGTAGAACCCTTCATCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTHLRLPSMAGTAQA*VISLGSEVEPFIHH Trigger: GTGGTGGATGAAGGGTTCTACTTCACTCCCAAGGGAGATGACCCATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGAGATGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | ATCCGGCTGGTCCATGTCTGGGTACTTGTAAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAAAGTCCCACCTTCCCCGTCGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRLVHVWVLVSCIRR*RVVEMESPTFPVVR Trigger: TCTGACGACGGGGAAGGTGGGACTTTCCATTTCCACGACCCTCCACCTCCTTATACAGCTTACAAGTACCCAGACATGGACCAGCCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | AGACGCCTCATAGGGTGGTGGTGGATCATCCGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATAAGGAGGTGGAGGGTCGTGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: RRLIGWWWIIRLVHV*VLVSCIRRWRVVEM Trigger: CATTTCCACGACCCTCCACCTCCTTATACAGCTTACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 90 bp | AGGGTCGTAGAACACACTGTCTGGGTTGATAGACGCCTCATAGGGTaGTGGTGGATCATCCGGCTGGTCCATGTCTGGGTACTTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVVEHTVWVDRRLIG*WWIIRLVHVWVLVS Trigger: GCTTACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCTATCAACCCAGACAGTGTGTTCTACGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | TTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGGAGTAGGGTGGGCGCAGAACACGTaGTCATTCTCAGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSFYVHTRSWWGCGSGVGWAQNT*SFSDMA Trigger: TGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCA...CCCTACTCCACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | AGAGCACAGGGATCCAGAGTGTGGCAGAGAAAAGCCAGCATGCCCCAACCCTCCTCCAGACACATGAATTaGCAGCATTCCTTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAQGSRVWQRKASMPQPSSRHMN*QHSLGS Trigger: GGACCCTAAGGAATGCTGCAAATTCATGTGTCTGGA...GGAGGGTTGGGGCATGCTGGCTTTTCTCTGCCACACTCTGGATCCCTGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | ACGGGCATGGCTAGACCCAGTGGTCATTCACCAGCAAGCAGAGCACAGGGATCCTCCAGACACATGAATTaGCAGCATTCCTTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGMARPSGHSPASRAQGSSRHMN*QHSLGS Trigger: GGACCCTAAGGAATGCTGCAAATTCATGTGTCTGGA...GGATCCCTGTGCTCTGCTTGCTGGTGAATGACCACTGGGTCTAGCCATGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | GTCGTAGAACACACTGTCTGGGTTGATAGACGCCTCATAGGGTGGTaGTGGATCATCCGGCTGGTCCATGTCTGGGTACTTGTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVEHTVWVDRRLIGW*WIIRLVHVWVLVSC Trigger: ACAGCTTACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCTATCAACCCAGACAGTGTGTTCTACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | TGCCTGATTTCAGTTTCTATGTACACACCCGCAGCTGGTGGGGATGTGGCAGTGTGGGCGCAGAACACGTaGTCATTCTCAGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLISVSMYTPAAGGDVAVWAQNT*SFSDMA Trigger: TGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCA...CACTGCCACATCCCCACCAGCTGCGGGTGTGTACATAGAAACTGAAATCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 90 bp | GTAGAACACACTGTCTGGGTTGATAGACGCCTCATAGGGTGGTGGTaGATCATCCGGCTGGTCCATGTCTGGGTACTTGTAAGCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: VEHTVWVDRRLIGWW*IIRLVHVWVLVSCI Trigger: TATACAGCTTACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCTATCAACCCAGACAGTGTGTTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTGGAAACGTGTGCTTTCAACACCTGTGTCATTCCACCATTTAAAGAACAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CFLETCAFNTCVIPPFKEQCHHL*GLAGWP Trigger: AGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTG...TTCTTTAAATGGTGGAATGACACAGGTGTTGAAAGCACACGTTTCCAAGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | AAAGATGTACTTGGTATAAGTGAAGCCCACTGCCTCTGCTTCTTGGAAACGTGTTCTTATCCTCACACGTaGGCCAGCCATCACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KDVLGISEAHCLCFLETCSYPHT*ASHHTA Trigger: GGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGA...ACACGTTTCCAAGAAGCAGAGGCAGTGGGCTTCACTTATACCAAGTACATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS-3UTR CAA 90 bp | TCAGGATGTCCACTTGAACCATTCTCTTCCCAAACAACCCTTTATGGCACAGATTCCAGACACATGAATTaGCAGCATTCCTTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGCPLEPFSSQTTLYGTDSRHMN*QHSLGS Trigger: GGACCCTAAGGAATGCTGCAAATTCATGTGTCTGGA...ATCTGTGCCATAAAGGGTTGTTTGGGAAGAGAATGGTTCAAGTGGACATCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 72 bp | GGGGAGGCGCCCACCCCCTGGCGGTGCTTCTGTAGCTaGGGTGCTTCCACTCTGGGCGGGATCAGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GEAPTPWRCFCS*GASTLGGIRRH Trigger: GTGCCTCCTGATCCCGCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCGCCAGGGGGTGGGCGCCTCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GCTCCAATCAGGGACTCGATGCGCTCCCGGCGCCGCTaGCGTAGCCGGTGGACCATGAAAAGCAGCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: APIRDSMRSRRR*RSRWTMKSSSE Trigger: CTCGCTGCTGCTTTTCATGGTCCACCGGCTACGCCAGCGGCGCCGGGAGCGCATCGAGTCCCTGATTGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | CCTGGCGGTGCTTCTGTAGCTGGGGTGCTTCCACTCTaGGCGGGATCAGGAGGCACCAGCAGGGCACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PGGASVAGVLPL*AGSGGTSRALL Trigger: TAGCAGTGCCCTGCTGGTGCCTCCTGATCCCGCCCAGAGTGGAAGCACCCCAGCTACAGAAGCACCGCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | TTGCGCTGGTCTTTCCAGCCGAAGCTCCGCTCTGGCTaGTCCCATTCCTGGGCTAGGACGAAGCGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRWSFQPKLRSG*SHSWARTKRSS Trigger: GGAGCTGCGCTTCGTCCTAGCCCAGGAATGGGACCAGCCAGAGCGGAGCTTCGGCTGGAAAGACCAGCGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS GCA 72 bp | GGGGAGGGGTATGCACTGGATGGTACCACCGTGACATaGAAACTGCCCAGGGTTGCACCGAAGCTCTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GEGYALDGTTVT*KLPRVAPKLWP Trigger: CGGCCAGAGCTTCGGTGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS GCA 72 bp | GCGGCTGATCCAAGTGCCTGGGCAATGCACCTTCAATaGCACCATCTCTTGGGGCTGGCAGGCTGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AADPSAWAMHLQ*HHLLGLAGWPP Trigger: TGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS GCA 72 bp | TGCAGGGGGCAGCGGCTGATCCAAGTGCCTGGGCAATaGACCTTCAATGCCACCATCTCTTGGGGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CRGQRLIQVPGQ*TFNATISWGWQ Trigger: CTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GTACAGGCTGAGCCACGTTCACTGTGTGGAAGTGTGTaGGGTCACCTCCTCTGGCTCGCCCCTGCCGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VQAEPRSLCGSV*GHLLWLAPAAD Trigger: ATCTGCGGCAGGGGCGAGCCAGAGGAGGTGACCCCACACACTTCCACACAGTGAACGTGGCTCAGCCTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS GCA 72 bp | AGGGATCCTCCGGCCAAGGTTGAAATGGTGCAAGTTTaGTCCAATCAGGGACTCGATGCGCTCCCGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RDPPAKVEMVQV*SNQGLDALPAP Trigger: CGGCGCCGGGAGCGCATCGAGTCCCTGATTGGAGCAAACTTGCACCATTTCAACCTTGGCCGGAGGATCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | CGTTCACTGTGTGGAAGTGTGTGGGGTCACCTCCTCTaGCTCGCCCCTGCCGCAGATCCACAGTTTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLCGSVWGHLL*LAPAADPQFPS Trigger: GGAAGGAAACTGTGGATCTGCGGCAGGGGCGAGCCAGAGGAGGTGACCCCACACACTTCCACACAGTGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CAA 72 bp | AGTGCCTGGGCAATGCACCTTCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCTCCACAGGCTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAWAMHLQCHHL*GLAGWPPQAQR Trigger: CCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS TCA 72 bp | TGCCAGGGGAGGGGTATGCACTGGATGGTACCACCGTaGCATGCAAACTGCCCAGGGTTGCACCGAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CQGRGMHWMVPP*HANCPGLHRSS Trigger: AGAGCTTCGGTGCAACCCTGGGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS GCA 72 bp | ACGTTGGCCAGCCATCACACTGCCAGGGGAGGGGTATaGACTGGATGGTACCACCGTGACATGCAAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLASHHTARGGV*TGWYHRDMQTA Trigger: GGCAGTTTGCATGTCACGGTGGTACCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 72 bp | CACCTTCAATGCCACCATCTCTTGGGGCTGGCAGGCTaGCCTCCACAGGCTCAAAGGCATCGTCATCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLQCHHLLGLAG*PPQAQRHRHLQ Trigger: CTGCAGATGACGATGCCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | ATGTCTCTGCAGGGGGCAGCGGCTGATCCAAGTGCCTaGGCAATGCACCTTCAATGCCACCATCTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MSLQGAAADPSA*AMHLQCHHLLG Trigger: CCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGCCGCTGCCCCCTGCAGAGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GCAGCTGGCTGTGCCTTCATAGTGGTGCCACCCACTTaGGCATTTCCTGCTGAAGCGTACAGGCTGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AAGCAFIVVPPT*AFPAEAYRLSH Trigger: GTGGCTCAGCCTGTACGCTTCAGCAGGAAATGCCCAAGTGGGTGGCACCACTATGAAGGCACAGCCAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS CAA 90 bp | GCTGATCCAAGTGCCTGGGCAATGCACCTTCAATGCCACCATCTCTaGGGGCTGGCAGGCTGGCCTCCACAGGCTCAAAGGCATCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ADPSAWAMHLQCHHL*GLAGWPPQAQRHRH Trigger: ATGACGATGCCTTTGAGCCTGTGGAGGCCAGCCTGCCAGCCCCAAGAGATGGTGGCATTGAAGGTGCATTGCCCAGGCACTTGGATCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CAA 90 bp | CTCCAGTCACTGGACAGTCGGCTTCATCACTCTTATCCTCACACGTaGGCCAGCCATCACACTGCCAGGGGAGGGGTATGCACTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LQSLDSRLHHSYPHT*ASHHTARGGVCTGW Trigger: CCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCAGTGACTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117082.2 |
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| CDS TCA 72 bp | AATTTGCAGCATTCCTTAGGGTCCTTGCGGTACTGCTaGCACCCCTGGGGCCGCTCACACAGGGCAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: NLQHSLGSLRYC*HPWGRSHRAAT Trigger: TGTTGCTGCCCTGTGTGAGCGGCCCCAGGGGTGTCAGCAGTACCGCAAGGACCCTAAGGAATGCTGCAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GGAGCTGGGCGCAGAACACGTTGTCATTCTCAGACATaGCAGAGGCGAAGATGGGATCTGGGGGCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GAGRRTRCHSQT*QRRRWDLGAGT Trigger: TGTTCCTGCCCCCAGATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 72 bp | CACAGGGCAGCAACACACATCTCAGGCTCCCCTCGATaGCAGGTACAGCTCAAGCATGGGTCATCTCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HRAATHISGSPR*QVQLKHGSSPL Trigger: CAAGGGAGATGACCCATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGAGATGTGTGTTGCTGCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CAA 72 bp | CTGGACAGTCGGCTTCATCACTCTTATCCTCACACGTaGGCCAGCCATCACACTGCCAGGGGAGGGGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: LDSRLHHSYPHT*ASHHTARGGVC Trigger: GCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CAA 90 bp | CAGTCACTTCTGGACAGTCGGCTTCATCACTCTTATCCTCACACGTaGGCCAGCCATCACACTGCCAGGGGAGGGGTATGCACTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: QSLLDSRLHHSYPHT*ASHHTARGGVCTGW Trigger: CCATCCAGTGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCAGAAGTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117945.8 |
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| CDS CAA 90 bp | CTCAGGGTAGGAAAGTGGAAACACTGGAGCTGGGCGCAGAACACGTaGTCATTCTCAGACATGGCAGAGGCGAAGATGGGATCTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRVGKWKHWSWAQNT*SFSDMAEAKMGSGG Trigger: GCCCCCAGATCCCATCTTCGCCTCTGCCATGTCTGAGAATGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS TCA 72 bp | GACAGGTCTGTGCAGCATCCCAGTAGTTCTCTCCACTaGGGTAGACCCGGTAGCAGCTGGCTGTGCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: DRSVQHPSSSLH*GRPGSSWLCLH Trigger: ATGAAGGCACAGCCAGCTGCTACCGGGTCTACCTCAGTGGAGAGAACTACTGGGATGCTGCACAGACCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS TCA 72 bp | GAAGCGCAGCTCCTGGTCAGTGGAGAAGGTAGCAAGTaGGCCATTCACACGCTGACAGGTCTGTGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: EAQLLVSGEGSK*AIHTLTGLCSI Trigger: GATGCTGCACAGACCTGTCAGCGTGTGAATGGCTCACTTGCTACCTTCTCCACTGACCAGGAGCTGCGCTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 72 bp | TGGACAGTCGGCTTCATCACTCTTATCCTCACACGTTaGCCAGCCATCACACTGCCAGGGGAGGGGTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: WTVGFITLILTR*PAITLPGEGYA Trigger: TGCATACCCCTCCCCTGGCAGTGTGATGGCTGGCCAACGTGTGAGGATAAGAGTGATGAAGCCGACTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
||
| CDS CCA 72 bp | TGGTCCCATTCCTGGGCTAGGACGAAGCGCAGCTCCTaGTCAGTGGAGAAGGTAGCAAGTGAGCCATTCACA | + |
|
Preference number: 6 (lower is better) Translates to: WSHSWARTKRSS*SVEKVASEPFT Trigger: TGTGAATGGCTCACTTGCTACCTTCTCCACTGACCAGGAGCTGCGCTTCGTCCTAGCCCAGGAATGGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 |
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| CDS CCA 72 bp | GAAGACTTCTCAGAGCAGCTCTCGGCGTGCCAGCTGTaGAGGTCATGGTGCCTCAGGGTAGGAAAGTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EDFSEQLSACQL*RSWCLRVGKWK Trigger: TTTCCACTTTCCTACCCTGAGGCACCATGACCTCCACAGCTGGCACGCCGAGAGCTGCTCTGAGAAGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | CTCAGGCTCCCCTCGATGGCAGGTACAGCTCAAGCATaGGTCATCTCCCTTGGGAGTGAAGTAGAACCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLPSMAGTAQA*VISLGSEVEPF Trigger: GAAGGGTTCTACTTCACTCCCAAGGGAGATGACCCATGCTTGAGCTGTACCTGCCATCGAGGGGAGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000012152.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS TCA 72 bp | TCCCACCTTCCCCGTCGTCAGAAAGATGTAGTGGCGTaGGGCCTGTGCCAAACCCATCTGGACCATAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SHLPRRQKDVVA*GLCQTHLDHSQ Trigger: TTGACTATGGTCCAGATGGGTTTGGCACAGGCCTCACGCCACTACATCTTTCTGACGACGGGGAAGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GAACACACTGTCTGGGTTGATAGACGCCTCATAGGGTaGTGGTGGATCATCCGGCTGGTCCATGTCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: EHTVWVDRRLIG*WWIIRLVHVWV Trigger: TACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCTATCAACCCAGACAGTGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | AGGTCATGGTGCCTCAGGGTAGGAAAGTGGAAACACTaGAGCTGGGCGCAGAACACGTTGTCATTCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: RSWCLRVGKWKH*SWAQNTLSFSD Trigger: GTCTGAGAATGACAACGTGTTCTGCGCCCAGCTCCAGTGTTTCCACTTTCCTACCCTGAGGCACCATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | ATAGGGTGGTGGTGGATCATCCGGCTGGTCCATGTCTaGGTACTTGTAAGCTGTATAAGGAGGTGGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: IGWWWIIRLVHV*VLVSCIRRWRV Trigger: GACCCTCCACCTCCTTATACAGCTTACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | ACTGTCTGGGTTGATAGACGCCTCATAGGGTGGTGGTaGATCATCCGGCTGGTCCATGTCTGGGTACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TVWVDRRLIGWW*IIRLVHVWVLV Trigger: TACAAGTACCCAGACATGGACCAGCCGGATGATCCACCACCACCCTATGAGGCGTCTATCAACCCAGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS TCA 72 bp | GACCATAGTCAAAGCCAGGGATCCTCCGGCCAAGGTTaGAATGGTGCAAGTTTGCTCCAATCAGGGACTCGA | + |
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Preference number: 6 (lower is better) Translates to: DHSQSQGSSGQG*NGASLLQSGTR Trigger: TCGAGTCCCTGATTGGAGCAAACTTGCACCATTTCAACCTTGGCCGGAGGATCCCTGGCTTTGACTATGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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| CDS CCA 72 bp | GTCCATGTCTGGGTACTTGTAAGCTGTATAAGGAGGTaGAGGGTCGTGGAAATGGAAAGTCCCACCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VHVWVLVSCIRR*RVVEMESPTFP Trigger: GGGGAAGGTGGGACTTTCCATTTCCACGACCCTCCACCTCCTTATACAGCTTACAAGTACCCAGACATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000012152.13 ENSMUST00000066127.13 ENSMUST00000117082.2 ENSMUST00000117945.8 ENSMUST00000155943.9 |
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