Pregenerated sensors for DGAT2L6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067597Ensembl transcript IDs: ENSMUST00000037541.9
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTaGCAAGCATTTCCGGCTTGGTTGGTATATCTTCACACCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: GYLGGDSVAGLSIRY*QAFPAWLVYLHTFQ Trigger: TTGAAAGGTGTGAAGATATACCAACCAAGCCGGAAATGCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CCA 90 bp | CCAGTAAAGGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTTaGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: PVKASPLLLKSVLAT*AGIQLLDCQFGIAK Trigger: CTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCCTTTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGCCAAGCCCATGTAGCTTCACCTaGATCCCTTGTGTATTTGAG | + |
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Preference number: 2 (lower is better) Translates to: WLLGRGFSCWIVNSVLPSPCSFT*IPCVFE Trigger: CTCAAATACACAAGGGATCCAGGTGAAGCTACATGG...GCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CAA 90 bp | TGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATaGCCAAGCATTTCCGGCTTGGTTGGTATATCTTCACACCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: WLLGRGFSCWIVNSV*PSISGLVGISSHLS Trigger: TGAAAGGTGTGAAGATATACCAACCAAGCCGGAAATGCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CAA 90 bp | CCCAGTAAAGGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTaGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSKGLPFITQICLGY*GGDSVAGLSIRYCQ Trigger: TTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCCTTTACTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGTTTTGCCTGTTTGAATTAGAAAGCTACAGTTCAGGACCCCCAGTTTACTTAAACAATGACATGTaGCAGAGATACCCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: MEFCLFELESYSSGPPVYLNNDM*QRYPLP Trigger: GGGGAGGGGGTATCTCTGTCACATGTCATTGTTTAA...GTAAACTGGGGGTCCTGAACTGTAGCTTTCTAATTCAAACAGGCAAAACTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR-3UTR TCA 90 bp | ATACTAAAGATGCCACTAAGGTTTGTGGGAAAAGAACACAGAATACTTTGTCTTGATCCCTTGTGTATTTaGGCTTCAGTTACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: ILKMPLRFVGKEHRILCLDPLCI*ASVTEI Trigger: AATCTCTGTAACTGAAGCTCAAATACACAAGGGATC...AAGACAAAGTATTCTGTGTTCTTTTCCCACAAACCTTAGTGGCATCTTTAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR GCA 72 bp | GGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTaGCAAGCATTTCCGGCTTGGTTGGTATATCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GGDSVAGLSIRY*QAFPAWLVYLH Trigger: GTGAAGATATACCAACCAAGCCGGAAATGCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CCA 72 bp | GCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTTaGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGT | + |
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Preference number: 3 (lower is better) Translates to: ASPLLLKSVLAT*AGIQLLDCQFG Trigger: ACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR-3UTR CAA 90 bp | AATCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTAGGATCCCTTGTGTATTaGAGCTTCAGTTACAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: NLSWLLGRGFSCWIVNSVGSLVY*SFSYRD Trigger: ATCTCTGTAACTGAAGCTCAAATACACAAGGGATCC...TACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCTAAACCTAAATACTAAAGATGCCACTAAGGTTTGTGGGAAAAGAACACAGTGGGCGGGGATTCAGTaGCTGGATTGTCAATTCGGT | + |
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Preference number: 3 (lower is better) Translates to: SLNLNTKDATKVCGKRTQWAGIQ*LDCQFG Trigger: ACCGAATTGACAATCCAGCAACTGAATCCCCGCCCA...CTGTGTTCTTTTCCCACAAACCTTAGTGGCATCTTTAGTATTTAGGTTTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CCA 72 bp | TCTCTCCCCAAATTCTTCCTTCCATGTAGCTTCACCTaGATCCCTTGTGTATTTGAGCTTCAGTTACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SLPKFFLPCSFT*IPCVFELQLQR Trigger: TCTCTGTAACTGAAGCTCAAATACACAAGGGATCCAGGTGAAGCTACATGGAAGGAAGAATTTGGGGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TCCCCAGTAAAGGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTTGGGCGCGGGATCAGGGATCTTaGGGACTGGCAAGGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SPVKASPLLLKSVLATWARDQGS*GLARVL Trigger: GAGAACCCTTGCCAGTCCCCAAGATCCCTGATCCCG...CGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCCTTTACTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR GCA 90 bp | TGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGCCAAGCGCAGGAGATAGGGCATaGCCAAGATGGAAAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: WLLGRGFSCWIVNSVLPSAGDRA*PRWKEF Trigger: GAACTCTTTCCATCTTGGGCATGCCCTATCTCCTGC...GCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR TCA 90 bp | TCCCCAGTAAAGGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTTGGGCGGATCACAGCATTGCCTaGGTCTTTCTGGGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPVKASPLLLKSVLATWADHSIA*VFLGQL Trigger: AAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATC...CGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCCTTTACTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR TCA 90 bp | ATTACTCAAATCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCACTCCACCCGGCACAATaGTCACAGCATTGCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ITQICLGYLGGDSVAGLSLHPAQ*SQHCLS Trigger: ACTCAGGCAATGCTGTGATCATTGTGCCGGGTGGAG...TGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TCCCCAGTAAAGGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTTGGGCGTTGCCTGAGTCTTTCTaGGTCAGCTTGTGCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPVKASPLLLKSVLATWALPESF*VSLCVR Trigger: TCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAA...CGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCCTTTACTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CAA 72 bp | GGCCTCCCCTTTATTACTCAAATCTGTCTTGGCTACTaGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGG | + |
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Preference number: 4 (lower is better) Translates to: GLPFITQICLGY*GGDSVAGLSIR Trigger: CCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAATAAAGGGGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | AATCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATCAGCTCGTGGGTCTTaGAGAGGCCATATTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NLSWLLGRGFSCWIVNSVSARGS*RGHIQL Trigger: AAGCTGAATATGGCCTCTCCAAGACCCACGAGCTGA...TACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| 3UTR CAA 72 bp | GGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATaGCCAAGCATTTCCGGCTTGGTTGGTATATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRGFSCWIVNSV*PSISGLVGISS Trigger: TGAAGATATACCAACCAAGCCGGAAATGCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR TCA 90 bp | TCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGAACGCCTACCATCTTaGATGTGGGTGTTCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: SVLATWAGIQLLDCQFGIERLPS*MWVFQS Trigger: TGATTGGAACACCCACATTCAAGATGGTAGGCGTTC...AATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR GCA 90 bp | CACCTTTCAAATCTGTCTCTCCCCAAATTCTTCCTTCCATGTAGCTTCACCTGGAGAACCTTAGCCATGTaGCTTCAGCAAAGGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HLSNLSLPKFFLPCSFTWRTLAM*LQQRSL Trigger: AAGAGACCTTTGCTGAAGGCACATGGCTAAGGTTCT...CCAGGTGAAGCTACATGGAAGGAAGAATTTGGGGAGAGACAGATTTGAAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTGCCAAGCCTTCACCAGCTTTACTaGAAAGTAGCTTTGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: WLLGRGFSCWIVNSVLPSLHQLY*KVALEI Trigger: TATTTCCAAAGCTACTTTCCAGTAAAGCTGGTGAAG...GCTTGGCAATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TCCCCAAATTCTTCCTTCCATGTAGCTTCACCTGGATCCCTTGTGTATTTGAGCTTGGGAGAAAGGTCATaGGTCTTCACCAGCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: SPNSSFHVASPGSLVYLSLGERS*VFTSFT Trigger: AGTAAAGCTGGTGAAGACCCATGACCTTTCTCCCAA...GCTCAAATACACAAGGGATCCAGGTGAAGCTACATGGAAGGAAGAATTTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTTATTCAGCTTTGTGTTaGTCAAACAGCTTGCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLATWAGIQLLDCQFGIYSALC*SNSLRR Trigger: CCTACGCAAGCTGTTTGACCAACACAAAGCTGAATA...AATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | ATTACTCAAATCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAAGGGCATGCCCAAGATaGAAAGAGTTCCTAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ITQICLGYLGGDSVAGLSRACPR*KEFLKV Trigger: TACTTTTAGGAACTCTTTCCATCTTGGGCATGCCCT...TGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATTTGAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR TCA 90 bp | GGTATATCTTCACACCTTTCAAATCTGTCTCTCCCCAAATTCTTCCTTCCATGTGTTTCGTACCCAAGCTaGACGCCTACCATCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GISSHLSNLSLPKFFLPCVSYPS*TPTILN Trigger: ATTCAAGATGGTAGGCGTTCAGCTTGGGTACGAAAC...ACATGGAAGGAAGAATTTGGGGAGAGACAGATTTGAAAGGTGTGAAGATATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CCA 90 bp | TCCCCAAATTCTTCCTTCCATGTAGCTTCACCTGGATCCCTTGTGTATTTGAGCAGACAACTTACTCACTaGACAAATACCCAAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SPNSSFHVASPGSLVYLSRQLTH*TNTQGH Trigger: ATGTCCTTGGGTATTTGTCCAGTGAGTAAGTTGTCT...GCTCAAATACACAAGGGATCCAGGTGAAGCTACATGGAAGGAAGAATTTGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS TCA 90 bp | GAGCGATTCAGAAGCTCCACCCGGCACAATGATCACAGCATTGCCTaGGTCTTTCTGGGTCAGCTTGTGCGTCAGAGACAACTTACTCAC | + |
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Preference number: 5 (lower is better) Translates to: ERFRSSTRHNDHSIA*VFLGQLVRQRQLTH Trigger: GTGAGTAAGTTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATCATTGTGCCGGGTGGAGCTTCTGAATCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTTTCAGCTCGTGGGTCTaGGAGAGGCCATATTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SVLATWAGIQLLDCQFGIFSSWV*ERPYSA Trigger: AGCTGAATATGGCCTCTCCAAGACCCACGAGCTGAA...AATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS GCA 90 bp | GGCACAATGATCACAGCATTGCCTGAGTCTTTCTGGGTCAGCTTGTaGGTCAGAGACAACTTACTCACTGGACAAATACCCAAGGACATC | + |
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Preference number: 5 (lower is better) Translates to: GTMITALPESFWVSL*VRDNLLTGQIPKDI Trigger: GATGTCCTTGGGTATTTGTCCAGTGAGTAAGTTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATCATTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CAA 90 bp | AATCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTAGTGGTAATAGGATGGTaGAAAGGCAAAAAGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NLSWLLGRGFSCWIVNSVVVIGW*KGKKPQ Trigger: CTGGGGCTTTTTGCCTTTCAACCATCCTATTACCAC...TACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTGGCTACTTGGGCGGGGATTCAGTTGCTGGATTGTCAATTCGGTATTTACTGGAAAGTAGCTTaGGAAATACTTCCACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SVLATWAGIQLLDCQFGIYWKVA*EILPQG Trigger: ACCCTGTGGAAGTATTTCCAAAGCTACTTTCCAGTA...AATACCGAATTGACAATCCAGCAACTGAATCCCCGCCCAAGTAGCCAAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS CCA 90 bp | TGGAAAGAGTTCCTAAAAGTACATAAACTGGAATCCACTGTAAGATaGAGAGTGTTCGGAGGCCTTCCTGCAGATCTAGACAGGAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: WKEFLKVHKLESTVR*RVFGGLPADLDRRK Trigger: CTTTCTCCTGTCTAGATCTGCAGGAAGGCCTCCGAACACTCTCCATCTTACAGTGGATTCCAGTTTATGTACTTTTAGGAACTCTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CAA 90 bp | GGTATATCTTCACACCTTTCAAATCTGTCTCTCCCCAAATTCTTCCTTCCATGTAGGCCATATTCAGCTTaGTGTTGGTCAAACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GISSHLSNLSLPKFFLPCRPYSA*CWSNSL Trigger: CAAGCTGTTTGACCAACACAAAGCTGAATATGGCCT...ACATGGAAGGAAGAATTTGGGGAGAGACAGATTTGAAAGGTGTGAAGATATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS-3UTR CAA 90 bp | ATACTAAAGATGCCACTAAGGTTTGTGGGAAAAGAACACAGAATACTTTGTCTTACAATGATCACAGCATaGCCTGAGTCTTTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: ILKMPLRFVGKEHRILCLTMITA*PESFWV Trigger: GACCCAGAAAGACTCAGGCAATGCTGTGATCATTGT...AAGACAAAGTATTCTGTGTTCTTTTCCCACAAACCTTAGTGGCATCTTTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS TCA 72 bp | AGAAGCTCCACCCGGCACAATGATCACAGCATTGCCTaGGTCTTTCTGGGTCAGCTTGTGCGTCAGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: RSSTRHNDHSIA*VFLGQLVRQRQ Trigger: TTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATCATTGTGCCGGGTGGAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS CAA 90 bp | CCCGGCACAATGATCACAGCATTGCCTGAGTCTTTCTGGGTCAGCTaGTGCGTCAGAGACAACTTACTCACTGGACAAATACCCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGTMITALPESFWVS*CVRDNLLTGQIPKD Trigger: GTCCTTGGGTATTTGTCCAGTGAGTAAGTTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATCATTGTGCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS TCA 72 bp | GAAATACTTCCACAGGGTCCAGTTTCGTACCCAAGCTaGACGCCTACCATCTTGAATGTGGGTGTTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: EILPQGPVSYPS*TPTILNVGVPI Trigger: GATTGGAACACCCACATTCAAGATGGTAGGCGTTCAGCTTGGGTACGAAACTGGACCCTGTGGAAGTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS GCA 72 bp | ATCACAGCATTGCCTGAGTCTTTCTGGGTCAGCTTGTaGGTCAGAGACAACTTACTCACTGGACAAATACCC | + |
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Preference number: 6 (lower is better) Translates to: ITALPESFWVSL*VRDNLLTGQIP Trigger: GGGTATTTGTCCAGTGAGTAAGTTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS CAA 72 bp | ATGATCACAGCATTGCCTGAGTCTTTCTGGGTCAGCTaGTGCGTCAGAGACAACTTACTCACTGGACAAATA | + |
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Preference number: 6 (lower is better) Translates to: MITALPESFWVS*CVRDNLLTGQI Trigger: TATTTGTCCAGTGAGTAAGTTGTCTCTGACGCACAAGCTGACCCAGAAAGACTCAGGCAATGCTGTGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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| CDS CCA 72 bp | TTCCTAAAAGTACATAAACTGGAATCCACTGTAAGATaGAGAGTGTTCGGAGGCCTTCCTGCAGATCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: FLKVHKLESTVR*RVFGGLPADLD Trigger: GTCTAGATCTGCAGGAAGGCCTCCGAACACTCTCCATCTTACAGTGGATTCCAGTTTATGTACTTTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037541.9 |
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