Pregenerated sensors for DGAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030747Ensembl transcript IDs: ENSMUST00000033001.6, ENSMUST00000207491.2, ENSMUST00000207611.2, ENSMUST00000208591.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTaGAGCCACGGGTGGGACATGGCCTCTGCCTCTCAAGAATCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GQLCPQPPLGTRNPT*SHGWDMASASQESL Trigger: CAGGGATTCTTGAGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 90 bp | AGAGACCCAAGCCGGGCAGTCCAGATGTTATCTACCCTCCCCAAGTaGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCG | + |
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Preference number: 1 (lower is better) Translates to: RDPSRAVQMLSTLPK*GQLCPQPPLGTRNP Trigger: CGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCCACTTGGGGAGGGTAGATAACATCTGGACTGCCCGGCTTGGGTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 90 bp | CCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTGCAGCCACGGGTaGGACATGGCCTCTGCCTCTCAAGAATCCCTGGAGTCACTAAGG | + |
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Preference number: 1 (lower is better) Translates to: PQPPLGTRNPTCSHG*DMASASQESLESLR Trigger: CCTTAGTGACTCCAGGGATTCTTGAGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR GCA 90 bp | GGCCTCTGCCTCTCAAGAATCCCTGGAGTCACTAAGGACTGCCCTTaGCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTGGGGAACGCTA | + |
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Preference number: 1 (lower is better) Translates to: GLCLSRIPGVTKDCP*PASQGQVSVVWGTL Trigger: TAGCGTTCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGTGACTCCAGGGATTCTTGAGAGGCAGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR TCA 90 bp | CCAGACTTGGGGTGTGGCTCAGGAGGATATGCGCCAGAGCAACGCTaGGCTGTGTCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PDLGCGSGGYAPEQR*AVSMVPTSRVKPAN Trigger: GTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGACACAGCTCAGCGTTGCTCTGGCGCATATCCTCCTGAGCCACACCCCAAGTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 90 bp | AGGCACCTCTGTGAAGAGAAGAGAAGCCCTTCCTCACACCAGACTTaGGGTGTGGCTCAGGAGGATATGCGCCAGAGCAACGCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RHLCEEKRSPSSHQT*GVAQEDMRQSNAEL Trigger: CAGCTCAGCGTTGCTCTGGCGCATATCCTCCTGAGCCACACCCCAAGTCTGGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGAGGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 90 bp | TCTGTGAAGAGAAGAGAAGCCCTTCCTCACACCAGACTTGGGGTGTaGCTCAGGAGGATATGCGCCAGAGCAACGCTGAGCTGTGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SVKRREALPHTRLGV*LRRICARATLSCVH Trigger: ATGGACACAGCTCAGCGTTGCTCTGGCGCATATCCTCCTGAGCCACACCCCAAGTCTGGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 90 bp | TTTTCCACCTTAGATCTGTTGAGCCAGGTGACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTGGAGCCAGTGCCTGAACTAGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: FSTLDLLSQVTEKMS*RAERMLEPVPELAS Trigger: GCTAGCTAGTTCAGGCACTGGCTCCAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR CAA 90 bp | AGCCGTGTCCCTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATaGGAGAAGAGGGCTAGGGTGAGGAGCAGAGACCCAAGCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SRVPSQETGGQGRLR*EKRARVRSRDPSRA Trigger: TGCCCGGCTTGGGTCTCTGCTCCTCACCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAGGGACACGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGACCTGCAGCCACGGGTaGGACATGGCCTCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSQETGGQGRLRLEKRARTCSHG*DMASAS Trigger: AGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGT...CCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTGCAGCCACCCACAGACACCCATaGCGCTTCCAAATTTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GASCALSLPLVRGTRPAATHRHP*RFQIYR Trigger: TCTGTAAATTTGGAAGCGTCATGGGTGTCTGTGGGT...GGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGACGGCACCTGTGGGACAGCCGTGTCCCTAGCCAGGAGACAGGAGGCCAGGTATCAGCCTCCACCTTaGGCAGGACACACTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QDGTCGTAVSLARRQEARYQPPP*AGHTRS Trigger: ACTTCTAGTGTGTCCTGCTCAAGGTGGAGGCTGATA...CCTGGCCTCCTGTCTCCTGGCTAGGGACACGGCTGTCCCACAGGTGCCGTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCACAGGAAGCCAGGCACCTCTGTGAAGAGAAGAGAAGCCCTTCCTCACACCGGAGTCACTAAGGACTaGCCTTGCCCAGCTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LHRKPGTSVKRREALPHTGVTKD*PCPASQ Trigger: CTGGCTAGCTGGGCAAGGGCAGTCCTTAGTGACTCC...GGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGAGGTGCCTGGCTTCCTGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGCGCCACACGGCCCAGTTTCGCACCCACTGCGATCTCCTGCCACCTTTCTTCGTGTTCCAGTCAAATaGCAGCCAGGTGAAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: VAPHGPVSHPLRSPATFLRVPVK*QPGEVE Trigger: CTCTACTTCACCTGGCTGGCATTTGACTGGAACACG...AAGAAAGGTGGCAGGAGATCGCAGTGGGTGCGAAACTGGGCCGTGTGGCGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGTCAGCAGGTTGTGTGTCTTCACCAGCTAGCACCAGGAAGGATAGGACCGCCAAAGTCCCTTCCTaGAAGTCGTCTTGCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WWSAGCVSSPASTRKDRTAKVPS*KSSCCG Trigger: CCCACAGCAAGACGACTTTCAGGAAGGGACTTTGGC...GGTCCTATCCTTCCTGGTGCTAGCTGGTGAAGACACACAACCTGCTGACCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATAACCCAAGCCACGGGTGGGACATaGCCTCTGCCTCTCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SMVPTSRVKPANSSEITQATGGT*PLPLKN Trigger: ATTCTTGAGAGGCAGAGGCCATGTCCCACCCGTGGC...TTGGGTTATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGACTTCAGTAGCCTCTGTGCTGAAGTTACAGAAGGCACCCAGGCCCATGCAGGGCAGCACGCTTTaGCCAAAGTCCCTTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LLTSVASVLKLQKAPRPMQGSTL*PKSLPE Trigger: TTCAGGAAGGGACTTTGGCCAAAGCGTGCTGCCCTG...CATGGGCCTGGGTGCCTTCTGTAACTTCAGCACAGAGGCTACTGAAGTCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGTATCCAAAGATATAGTTCCTGGTGGTCAGCAGGTTGTGTGTCTTCACCAGGGAGGGCTGAGAGGATaGTGGAGCCAGTGCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: VVSKDIVPGGQQVVCLHQGGLRG*WSQCLN Trigger: GTTCAGGCACTGGCTCCAGCATCCTCTCAGCCCTCC...CTGGTGAAGACACACAACCTGCTGACCACCAGGAACTATATCTTTGGATACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR GCA 90 bp | GGAACCCGACCTGCAGCCACGGGTGGGACATGGCCTCTGCCTCTCAAGAATCCCATTTACAGAACAAAATaGACTCAAGAACTCGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GTRPAATGGTWPLPLKNPIYRTK*TQELGR Trigger: TCTACCGAGTTCTTGAGTGCATTTTGTTCTGTAAAT...GGGATTCTTGAGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGTCGGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGACTTCAGTAGCCTCTGTGCTGAAGTTACAGAAGGCACCCAGGCCCATGACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLTSVASVLKLQKAPRPMTEKMS*RAERML Trigger: CAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGT...CATGGGCCTGGGTGCCTTCTGTAACTTCAGCACAGAGGCTACTGAAGTCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAACGCCTCATAAATGCCAACCTCCAGAGTaGAACCAGCCAACAGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SWRKQNTQEGSFLPTPHKCQPPE*NQPTAA Trigger: CGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCA...TTTATGAGGCGTTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CAA 90 bp | TGTAGTACTGAGATGACCTGCAGCTGTTTTTCCACCTTAGATCTGTaGAGCCAGGTGACAGAGAAGATGTCTTGGAGGGCTGAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CSTEMTCSCFSTLDL*SQVTEKMSWRAERM Trigger: CATCCTCTCAGCCCTCCAAGACATCTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGAAAAACAGCTGCAGGTCATCTCAGTACTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTACCAGCCAACGTAGCCAAATAGGGCCTTATGCCAGGAAACTTCTTGCTAGGCCCATGATGCCATaGGGGTGGTATCCAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: EVTSQRSQIGPYARKLLARPMMP*GWYPKI Trigger: TATCTTTGGATACCACCCCCATGGCATCATGGGCCT...AGCAAGAAGTTTCCTGGCATAAGGCCCTATTTGGCTACGTTGGCTGGTAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR GCA 72 bp | TGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTaGAGCCACGGGTGGGACATGGCCTCTGCCTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: CPQPPLGTRNPT*SHGWDMASASQ Trigger: TTGAGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 72 bp | AGCCGGGCAGTCCAGATGTTATCTACCCTCCCCAAGTaGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACG | + |
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Preference number: 3 (lower is better) Translates to: SRAVQMLSTLPK*GQLCPQPPLGT Trigger: CGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCCACTTGGGGAGGGTAGATAACATCTGGACTGCCCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 72 bp | CCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTaGGGAACGCTAGAAGGGGTGGGTAAGAAACCACCA | + |
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Preference number: 3 (lower is better) Translates to: PCPASQGQVSVV*GTLEGVGKKPP Trigger: TGGTGGTTTCTTACCCACCCCTTCTAGCGTTCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR GCA 72 bp | CTCTGCCTCTCAAGAATCCCTGGAGTCACTAAGGACTaGCCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LCLSRIPGVTKD*PCPASQGQVSV Trigger: GACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGTGACTCCAGGGATTCTTGAGAGGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 72 bp | AGAAGAGAAGCCCTTCCTCACACCAGACTTGGGGTGTaGCTCAGGAGGATATGCGCCAGAGCAACGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RREALPHTRLGV*LRRICARATLS Trigger: GCTCAGCGTTGCTCTGGCGCATATCCTCCTGAGCCACACCCCAAGTCTGGTGTGAGGAAGGGCTTCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR TCA 72 bp | GACCCAGTGTGCTGCACAGGAAGCCAGGCACCTCTGTaGAGAGAAGAGAAGCCCTTCCTCACACCAGACTTG | + |
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Preference number: 3 (lower is better) Translates to: DPVCCTGSQAPL*REEKPFLTPDL Trigger: CAAGTCTGGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGAGGTGCCTGGCTTCCTGTGCAGCACACTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 72 bp | TGCCATGGGGGTGGTATCCAAAGATATAGTTCCTGGTaGTCAGCAGGTTGTGTGTCTTCACCAGCTAGCACC | + |
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Preference number: 3 (lower is better) Translates to: CHGGGIQRYSSW*SAGCVSSPAST Trigger: GGTGCTAGCTGGTGAAGACACACAACCTGCTGACCACCAGGAACTATATCTTTGGATACCACCCCCATGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
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| 3UTR-3UTR CAA 90 bp | CAATCTCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAACGCCTCCAGGGTAGGCTCAGATaGGAGAAGAGGGCTAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: QSHGENRIHRRVAFSQRLQGRLR*EKRARV Trigger: CACCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTG...GAGGCGTTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGAGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR TCA 72 bp | GAAACCACCAAGGCCCATAAATATCAGCCTCCACCTTaGGCAGGACACACTAGAAGTGAGCTTAAAATACTG | + |
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Preference number: 3 (lower is better) Translates to: ETTKAHKYQPPP*AGHTRSELKIL Trigger: CAGTATTTTAAGCTCACTTCTAGTGTGTCCTGCTCAAGGTGGAGGCTGATATTTATGGGCCTTGGTGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| 3UTR CCA 72 bp | CCATTTATTAGTCTAGGAATATACAAAAGTGTGACATaGCACAACAATCTCATGGAGAAAACAGAATACACA | + |
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Preference number: 3 (lower is better) Translates to: PFISLGIYKSVT*HNNLMEKTEYT Trigger: TGTGTATTCTGTTTTCTCCATGAGATTGTTGTGCCATGTCACACTTTTGTATATTCCTAGACTAATAAATGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR TCA 90 bp | GGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTGCAGCCCTATGGTGTCTCGGTTaGCAGGGCAGATGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GASCALSLPLVRGTRPAALWCLG*QGRCLQ Trigger: CTGGAGGCATCTGCCCTGTCAACCGAGACACCATAG...GGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR TCA 90 bp | CTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGCCAGCTTGGGGACAGTaGTGGGCTCCCCCACGACGG | + |
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Preference number: 4 (lower is better) Translates to: LARRQEARVGSDWRRGLGPAWGQ*WAPPRR Trigger: CCGTCGTGGGGGAGCCCATCACTGTCCCCAAGCTGG...CCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR TCA 90 bp | ACTAAGGACTGCCCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTGGGGACCCCCACGACGGTGGTaGTGGGCTTGGAGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TKDCPCPASQGQVSVVWGPPRRW*WAWSRA Trigger: TGCCCTACTCCAAGCCCATCACCACCGTCGTGGGGG...TCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | CTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGGGGCTGAGAGGATGCTaGAGCCAGTGCCCCATCGCC | + |
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Preference number: 4 (lower is better) Translates to: LARRQEARVGSDWRRGLGGLRGC*SQCPIA Trigger: GGCGATGGGGCACTGGCTCCAGCATCCTCTCAGCCC...CCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | AGTAGCGCCACACGGCCCAGTTTCGCACCCACTGCGATCTCCTGCCACCTTTCTGGGCTGAGAGGATGCTaGAGCCAGTGCCCCATCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSATRPSFAPTAISCHLSGLRGC*SQCPIA Trigger: GGCGATGGGGCACTGGCTCCAGCATCCTCTCAGCCC...AGAAAGGTGGCAGGAGATCGCAGTGGGTGCGAAACTGGGCCGTGTGGCGCTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
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| CDS-3UTR GCA 90 bp | ACTAAGGACTGCCCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTGGGGAGGAGGGCTGAGAGGATaGTGGAGCCAGTGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: TKDCPCPASQGQVSVVWGGGLRG*WSQCPI Trigger: GATGGGGCACTGGCTCCAGCATCCTCTCAGCCCTCC...TCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR GCA 90 bp | CAAGACGGCACCTGTGGGACAGCCGTGTCCCTAGCCAGGAGACAGGAGGCCAGGCAGTTTCGCACCCACTaGGATCTCCTGCCACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QDGTCGTAVSLARRQEARQFRTH*DLLPPF Trigger: GAAAGGTGGCAGGAGATCGCAGTGGGTGCGAAACTG...CCTGGCCTCCTGTCTCCTGGCTAGGGACACGGCTGTCCCACAGGTGCCGTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | CCACACGGCCCAGTTTCGCACCCACTGCGATCTCCTGCCACCTTTCTTGGGCGTGGCCACTCCTGCTCTTaGCTGGCAGATAAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PHGPVSHPLRSPATFLGRGHSCS*LADKLD Trigger: GTCCAGCTTATCTGCCAGCCAAGAGCAGGAGTGGCC...ACGCCCAAGAAAGGTGGCAGGAGATCGCAGTGGGTGCGAAACTGGGCCGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
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| CDS-3UTR TCA 90 bp | CCAAGTGGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTCAAATGCCAGCCAGGTaGAGTAGAGCACAGCTATCA | + |
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Preference number: 4 (lower is better) Translates to: PSGASCALSLPLVRGTRPQMPAR*SRAQLS Trigger: TGATAGCTGTGCTCTACTTCACCTGGCTGGCATTTG...AGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCCACTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR TCA 90 bp | CTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGTGCGGTTCTTCAGGGTaGCTGCGTTCTTGCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LARRQEARVGSDWRRGLGCGSSG*LRSCQA Trigger: TGCCTGGCAAGAACGCAGTCACCCTGAAGAACCGCA...CCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR GCA 90 bp | CACCCACTGCGATCTCCTGCCACCTTTCTTGGGCGTGTTCCAGTCAAATGCCAGGGAGGGCTGAGAGGATaGTGGAGCCAGTGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: HPLRSPATFLGRVPVKCQGGLRG*WSQCPI Trigger: GATGGGGCACTGGCTCCAGCATCCTCTCAGCCCTCC...CTGGCATTTGACTGGAACACGCCCAAGAAAGGTGGCAGGAGATCGCAGTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
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| CDS-3UTR GCA 90 bp | AACCCAAGACGGCACCTGTGGGACAGCCGTGTCCCTAGCCAGGAGACAGGAGGCCTCGGCCATGGAAGATaGAGGGGGCGAAACCAATAT | + |
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Preference number: 4 (lower is better) Translates to: NPRRHLWDSRVPSQETGGLGHGR*RGRNQY Trigger: ATATTGGTTTCGCCCCCTGCATCTTCCATGGCCGAG...GCCTCCTGTCTCCTGGCTAGGGACACGGCTGTCCCACAGGTGCCGTCTTGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | GGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTGCAGCCAGATATAGTTCCTGGTaGTCAGCAGGTTGTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GASCALSLPLVRGTRPAARYSSW*SAGCVS Trigger: AGACACACAACCTGCTGACCACCAGGAACTATATCT...GGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | GGAACCCGACCTGCAGCCACGGGTGGGACATGGCCTCTGCCTCTCAAGAATCCCACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GTRPAATGGTWPLPLKNPTEKMS*RAERML Trigger: CAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGT...GGGATTCTTGAGAGGCAGAGGCCATGTCCCACCCGTGGCTGCAGGTCGGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS-3UTR CCA 90 bp | CCAAGTGGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTCAGCACCTCAGTCTCTaGAAGGCCAAATTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGASCALSLPLVRGTRPQHLSL*KAKFGL Trigger: AAGACCAAATTTGGCCTTCCAGAGACTGAGGTGCTG...AGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCCACTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR GCA 90 bp | CCTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGTTCTTCAGGGTGACTaGGTTCTTGCCAGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQETGGQGRLRLEKRARVLQGD*VLARHG Trigger: TCCATGCCTGGCAAGAACGCAGTCACCCTGAAGAAC...CCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | CTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGGGGCCTCCATGTACATaGCATGGTACAGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LARRQEARVGSDWRRGLGGPPCT*HGTGRC Trigger: ACATCGACCTGTACCATGCCATGTACATGGAGGCCC...CCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR TCA 90 bp | CTGACTTCAGTAGCCTCTGTGCTGAAGTTACAGAAGGCACCCAGGCCCATGATGAGCCCTAGGGATGACTaGCACTCACCCCATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSVASVLKLQKAPRPMMSPRDD*HSPHRP Trigger: TGGGCGATGGGGTGAGTGTCAGTCATCCCTAGGGCT...CATCATGGGCCTGGGTGCCTTCTGTAACTTCAGCACAGAGGCTACTGAAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207491.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGATGGGAAAGTAGTCTCGGAAGTAGCGCCACACGGCCCAGTTTCGCACCCACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGWESSLGSSATRPSFAPTEKMS*RAERML Trigger: CAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGT...GGGTGCGAAACTGGGCCGTGTGGCGCTACTTCCGAGACTACTTTCCCATCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS-3UTR CCA 90 bp | AACCCAAGACGGCACCTGTGGGACAGCCGTGTCCCTAGCCAGGAGACAGGAGGCCAAAGATATAGTTCCTaGTGGTCAGCAGGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NPRRHLWDSRVPSQETGGQRYSS*WSAGCV Trigger: CACACAACCTGCTGACCACCAGGAACTATATCTTTG...GCCTCCTGTCTCCTGGCTAGGGACACGGCTGTCCCACAGGTGCCGTCTTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGACTGCCCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTGGGGAAGGCCCATGATGCCATaGGGGTGGTATCCAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TKDCPCPASQGQVSVVWGRPMMP*GWYPKI Trigger: TATCTTTGGATACCACCCCCATGGCATCATGGGCCT...TCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATAACCCAAGCTCAGGGACTCAGCTaGACCTCCCACCACGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMVPTSRVKPANSSEITQAQGLS*TSHHDD Trigger: ATCATCGTGGTGGGAGGTGCAGCTGAGTCCCTGAGC...TTGGGTTATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGGAAGCCAGGCACCTCTGTGAAGAGAAGAGAAGCCCTTCCTCACACCTTCTGGAACTTCTTCTaGACCCATCGGCCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHRKPGTSVKRREALPHTFWNFF*THRPQE Trigger: TTCCTGGGGCCGATGGGTCCAGAAGAAGTTCCAGAA...GGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGAGGTGCCTGGCTTCCTGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATAACCCAAAAGAGGCCTCGGCCATaGAAGATGCAGGGGGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMVPTSRVKPANSSEITQKRPRP*KMQGAK Trigger: TTTCGCCCCCTGCATCTTCCATGGCCGAGGCCTCTT...TTGGGTTATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGTCCATGTACATGGCATaGTACAGGTCGATGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSQETGGQGRLRLEKRARSMYMA*YRSMSF Trigger: GAAAGACATCGACCTGTACCATGCCATGTACATGGA...CCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR TCA 90 bp | CTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGAGGGCTAGGGCCAAATTTGGTCTTGTaGTTGTCAAAGAGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LARRQEARVGSDWRRGLGPNLVL*LSKSFT Trigger: GGTGAAGCTCTTTGACAATCACAAGACCAAATTTGG...CCCTAGCCCTCTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATACGTGTTCCAGTCAAATaGCAGCCAGGTGAAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSMVPTSRVKPANSSEIRVPVK*QPGEVE Trigger: CTCTACTTCACCTGGCTGGCATTTGACTGGAACACG...TATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGACACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR TCA 90 bp | GCACAACAATCTCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAAAGGCACCCAGGCCCATaGTGCCATGGGGGTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: AQQSHGENRIHRRVAFSQRHPGP*CHGGGI Trigger: GATACCACCCCCATGGCATCATGGGCCTGGGTGCCT...TTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGAGATTGTTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR GCA 90 bp | AGCCGTGTCCCTAGCCAGGAGACAGGAGGCCAGGGTAGGCTCAGATTGGAGAAGTCCTCAAAGATCACCTaGTTGTATACCTCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVPSQETGGQGRLRLEKSSKIT*LYTSFS Trigger: AGAGAATGAGGTATACAAGCAGGTGATCTTTGAGGA...CTTCTCCAATCTGAGCCTACCCTGGCCTCCTGTCTCCTGGCTAGGGACACGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATAACCCAATCTTCACCAGCTGGATaGGAAAGTAGTCTCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMVPTSRVKPANSSEITQSSPAG*ESSLGS Trigger: ACTTCCGAGACTACTTTCCCATCCAGCTGGTGAAGA...TTGGGTTATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCCAACCTCCAGAGTGAAACCAGCCAACAGCAGCGAGATAACCCAATGCCACTCCCATTCTTaGAGAGCAAGTAGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SMVPTSRVKPANSSEITQCHSHS*RASSLW Trigger: CCATAGACTACTTGCTCTCCAAGAATGGGAGTGGCA...TTGGGTTATCTCGCTGCTGTTGGCTGGTTTCACTCTGGAGGTTGGCACCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGGAAGCCAGGCACCTCTGTGAAGAGAAGAGAAGCCCTTCCTCACACCCTGGAAGGCCAAATTTaGTCTTGTGATTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRKPGTSVKRREALPHTLEGQI*SCDCQR Trigger: TCTTTGACAATCACAAGACCAAATTTGGCCTTCCAG...GGTGTGAGGAAGGGCTTCTCTTCTCTTCACAGAGGTGCCTGGCTTCCTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR GCA 90 bp | GGAATATACAAAAGTGTGACATGGCACAACAATCTCATGGAGAAAACAGAATACTCTTTCTGGGTCGGGTaGTCCAGCTTGGGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIYKSVTWHNNLMEKTEYSFWVG*SSLGTV Trigger: CACTGTCCCCAAGCTGGAGCACCCGACCCAGAAAGA...GTATTCTGTTTTCTCCATGAGATTGTTGTGCCATGTCACACTTTTGTATATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CCA 90 bp | GGAATATACAAAAGTGTGACATGGCACAACAATCTCATGGAGAAAACAGAATACAGGTCGATGTCTTTCTaGGTCGGGTGCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIYKSVTWHNNLMEKTEYRSMSF*VGCSSL Trigger: CAAGCTGGAGCACCCGACCCAGAAAGACATCGACCT...GTATTCTGTTTTCTCCATGAGATTGTTGTGCCATGTCACACTTTTGTATATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | GGGGCCAGCTGTGCCCTCAGCCTCCCCTTGGTACGAGGAACCCGACCTGCAGCCTCTATGGTGTCTCGGTaGACAGGGCAGATGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GASCALSLPLVRGTRPAASMVSR*TGQMPP Trigger: TGGAGGCATCTGCCCTGTCAACCGAGACACCATAGA...GGCTGCAGGTCGGGTTCCTCGTACCAAGGGGAGGCTGAGGGCACAGCTGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | ACTAAGGACTGCCCTTGCCCAGCTAGCCAGGGCCAAGTGTCTGTCGTCTGGGGAAGGGTGACTGCGTTCTaGCCAGGCATGGAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKDCPCPASQGQVSVVWGRVTAF*PGMELR Trigger: CCTGAGCTCCATGCCTGGCAAGAACGCAGTCACCCT...TCCCCAGACGACAGACACTTGGCCCTGGCTAGCTGGGCAAGGGCAGTCCTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS TCA 90 bp | CATGGCGCAGGGCCAGCTTCACAAAGCCTTTGCGGTTCTTCAGGGTaGCTGCGTTCTTGCCAGGCATGGAGCTCAGGGACTCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGAGPASQSLCGSSG*LRSCQAWSSGTQLH Trigger: GTGCAGCTGAGTCCCTGAGCTCCATGCCTGGCAAGAACGCAGTCACCCTGAAGAACCGCAAAGGCTTTGTGAAGCTGGCCCTGCGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS GCA 90 bp | TCCATGTACATGGCATGGTACAGGTCGATGTCTTTCTGGGTCGGGTaGTCCAGCTTGGGGACAGTGATGGGCTCCCCCACGACGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMYMAWYRSMSFWVG*SSLGTVMGSPTTVV Trigger: CACCACCGTCGTGGGGGAGCCCATCACTGTCCCCAAGCTGGAGCACCCGACCCAGAAAGACATCGACCTGTACCATGCCATGTACATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CCA 90 bp | AGGATGACACTGCAGGCCACTCCTGCTCTTGGCTGGCAGATAAGCTaGACTGACTATAAGAAGGGCACGAGCTCCGGGCAGCCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMTLQATPALGWQIS*TDYKKGTSSGQPTA Trigger: TGCTGTGGGCTGCCCGGAGCTCGTGCCCTTCTTATAGTCAGTCCAGCTTATCTGCCAGCCAAGAGCAGGAGTGGCCTGCAGTGTCATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS GCA 90 bp | CCAGCCCCCAGGTGTCAGAGGAGAAGAGGCCTCGGCCATGGAAGATaGAGGGGGCGAAACCAATATACTTCTGGAACTTCTTCTGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRCQRRRGLGHGR*RGRNQYTSGTSSGP Trigger: GGGTCCAGAAGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCATGGCCGAGGCCTCTTCTCCTCTGACACCTGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS GCA 90 bp | CAGGGTGACTGCGTTCTTGCCAGGCATGGAGCTCAGGGACTCAGCTaGACCTCCCACCACGATGATGATAGCATTGCCACTCCCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGDCVLARHGAQGLS*TSHHDDDSIATPIL Trigger: AAGAATGGGAGTGGCAATGCTATCATCATCGTGGTGGGAGGTGCAGCTGAGTCCCTGAGCTCCATGCCTGGCAAGAACGCAGTCACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CCA 90 bp | AGGCCTCGGCCATGGAAGATGCAGGGGGCGAAACCAATATACTTCTaGAACTTCTTCTGGACCCATCGGCCCCAGGAACCCTCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRPWKMQGAKPIYF*NFFWTHRPQEPSSK Trigger: CTTTGAGGAGGGTTCCTGGGGCCGATGGGTCCAGAAGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCATGGCCGAGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGATGGGAAAGTAGTCTCGGAAGTAGCGCCACACGGCCCAGTTTCGCACCCTCCACCTTAGATCTGTaGAGCCAGGTGACAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGWESSLGSSATRPSFAPSTLDL*SQVTEK Trigger: CTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGA...GGGTGCGAAACTGGGCCGTGTGGCGCTACTTCCGAGACTACTTTCCCATCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS GCA 90 bp | CCACTGCGATCTCCTGCCACCTTTCTTGGGCGTGTTCCAGTCAAATaGCAGCCAGGTGAAGTAGAGCACAGCTATCAGCCAGCAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSPATFLGRVPVK*QPGEVEHSYQPAVC Trigger: ACAGACTGCTGGCTGATAGCTGTGCTCTACTTCACCTGGCTGGCATTTGACTGGAACACGCCCAAGAAAGGTGGCAGGAGATCGCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033001.6 ENSMUST00000207611.2 |
||
| CDS CCA 90 bp | TTTTCCACCTTAGATCTGTTGAGCCAGGTGACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTGGAGCCAGTGCCCCATCGCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSTLDLLSQVTEKMS*RAERMLEPVPHRPD Trigger: GTCTGGGCGATGGGGCACTGGCTCCAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033001.6 ENSMUST00000208591.2 |
||
| CDS CCA 90 bp | AAGGTGTACATGAGGATGACACTGCAGGCCACTCCTGCTCTTGGCTaGCAGATAAGCTGGACTGACTATAAGAAGGGCACGAGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVYMRMTLQATPALG*QISWTDYKKGTSSG Trigger: CCCGGAGCTCGTGCCCTTCTTATAGTCAGTCCAGCTTATCTGCCAGCCAAGAGCAGGAGTGGCCTGCAGTGTCATCCTCATGTACACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS-3UTR CAA 90 bp | TCACACCAGACTTGGGGTGTGGCTCAGGAGGATATGCGCCAGAGCAACGCTGAGAGCTTCACAAAGCCTTaGCGGTTCTTCAGGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SHQTWGVAQEDMRQSNAESFTKP*RFFRVT Trigger: AGTCACCCTGAAGAACCGCAAAGGCTTTGTGAAGCT...CTCAGCGTTGCTCTGGCGCATATCCTCCTGAGCCACACCCCAAGTCTGGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | CCCACTGCGATCTCCTGCCACCTTTCTTGGGCGTGTTCCAGTCAAATGCCAGCCCCAGAGGCAAGTAGGTaGGGCAAGTTAAAGCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTAISCHLSWACSSQMPAPEASR*GKLKLA Trigger: TGCTAGCTTTAACTTGCCCAACCTACTTGCCTCTGG...GGCTGGCATTTGACTGGAACACGCCCAAGAAAGGTGGCAGGAGATCGCAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS CCA 90 bp | TGGAAGATGCAGGGGGCGAAACCAATATACTTCTGGAACTTCTTCTaGACCCATCGGCCCCAGGAACCCTCCTCAAAGATCACCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKMQGAKPIYFWNFF*THRPQEPSSKITCL Trigger: CAAGCAGGTGATCTTTGAGGAGGGTTCCTGGGGCCGATGGGTCCAGAAGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CCA 90 bp | TGGTCTTGTGATTGTCAAAGAGCTTCACCAGGGCCTCCATGTACATaGCATGGTACAGGTCGATGTCTTTCTGGGTCGGGTGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSCDCQRASPGPPCT*HGTGRCLSGSGAPA Trigger: AGCTGGAGCACCCGACCCAGAAAGACATCGACCTGTACCATGCCATGTACATGGAGGCCCTGGTGAAGCTCTTTGACAATCACAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS TCA 90 bp | TTCACCTCCAGCACCTCAGTCTCTGGAAGGCCAAATTTGGTCTTGTaGTTGTCAAAGAGCTTCACCAGGGCCTCCATGTACATGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: FTSSTSVSGRPNLVL*LSKSFTRASMYMAW Trigger: CCATGCCATGTACATGGAGGCCCTGGTGAAGCTCTTTGACAATCACAAGACCAAATTTGGCCTTCCAGAGACTGAGGTGCTGGAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CCA 90 bp | TTTTCCACCTTAGATCTGTTGAGCCAGGTGACAGAGAAGATGTCTTaGAGGGCTGAGAGGATGCTGGAGCCAGTGCCCATTATGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: FSTLDLLSQVTEKMS*RAERMLEPVPIMEL Trigger: AAGTTCCATAATGGGCACTGGCTCCAGCATCCTCTCAGCCCTCCAAGACATCTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207611.2 |
||
| CDS-3UTR CAA 90 bp | GCACAACAATCTCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAACTCCTGCCACCTTTCTaGGGCGTGTTCCAGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AQQSHGENRIHRRVAFSQLLPPF*GVFQSN Trigger: ATTTGACTGGAACACGCCCAAGAAAGGTGGCAGGAG...TTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGAGATTGTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | TCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAACGCCTCATAAATCCACCTTAGATCTGTaGAGCCAGGTGACAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWRKQNTQEGSFLPTPHKSTLDL*SQVTEK Trigger: CTTCTCTGTCACCTGGCTCAACAGATCTAAGGTGGA...TTTATGAGGCGTTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS-3UTR CAA 90 bp | TCATGGAGAAAACAGAATACACAGGAGGGTAGCTTTCTCCCAACGCCTCATAAAATGCCAGGAAACTTCTaGCTGACTTCAGTAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWRKQNTQEGSFLPTPHKMPGNF*LTSVAS Trigger: AGAGGCTACTGAAGTCAGCAAGAAGTTTCCTGGCAT...TTTATGAGGCGTTGGGAGAAAGCTACCCTCCTGTGTATTCTGTTTTCTCCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CAA 90 bp | ATGGCATGGTACAGGTCGATGTCTTTCTGGGTCGGGTGCTCCAGCTaGGGGACAGTGATGGGCTCCCCCACGACGGTGGTGATGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MAWYRSMSFWVGCSS*GTVMGSPTTVVMGL Trigger: CAAGCCCATCACCACCGTCGTGGGGGAGCCCATCACTGTCCCCAAGCTGGAGCACCCGACCCAGAAAGACATCGACCTGTACCATGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS GCA 72 bp | ATGGCATGGTACAGGTCGATGTCTTTCTGGGTCGGGTaGTCCAGCTTGGGGACAGTGATGGGCTCCCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: MAWYRSMSFWVG*SSLGTVMGSPT Trigger: CGTGGGGGAGCCCATCACTGTCCCCAAGCTGGAGCACCCGACCCAGAAAGACATCGACCTGTACCATGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
||
| CDS CAA 72 bp | CCAGACCCCTCGCGTGACAGGGCAGATCCTTTATTCTaGTTTTCGCTGCGGGCAGCTTCCGCCCGACGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PDPSRDRADPLF*FSLRAASARRS Trigger: TGAGCGTCGGGCGGAAGCTGCCCGCAGCGAAAACAAGAATAAAGGATCTGCCCTGTCACGCGAGGGGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033001.6 ENSMUST00000207491.2 ENSMUST00000208591.2 |
||
| CDS CCA 72 bp | CTGCAGGCCACTCCTGCTCTTGGCTGGCAGATAAGCTaGACTGACTATAAGAAGGGCACGAGCTCCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQATPALGWQIS*TDYKKGTSSGQ Trigger: CTGCCCGGAGCTCGTGCCCTTCTTATAGTCAGTCCAGCTTATCTGCCAGCCAAGAGCAGGAGTGGCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
||
| CDS CAA 72 bp | TCAGCTCCATGGCGCAGGGCCAGCTTCACAAAGCCTTaGCGGTTCTTCAGGGTGACTGCGTTCTTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPWRRASFTKP*RFFRVTAFLPG Trigger: GCCTGGCAAGAACGCAGTCACCCTGAAGAACCGCAAAGGCTTTGTGAAGCTGGCCCTGCGCCATGGAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CCA 72 bp | AGCCCCCAGGTGTCAGAGGAGAAGAGGCCTCGGCCATaGAAGATGCAGGGGGCGAAACCAATATACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPQVSEEKRPRP*KMQGAKPIYFW Trigger: CCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCATGGCCGAGGCCTCTTCTCCTCTGACACCTGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS GCA 72 bp | TGCGTTCTTGCCAGGCATGGAGCTCAGGGACTCAGCTaGACCTCCCACCACGATGATGATAGCATTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: CVLARHGAQGLS*TSHHDDDSIAT Trigger: AGTGGCAATGCTATCATCATCGTGGTGGGAGGTGCAGCTGAGTCCCTGAGCTCCATGCCTGGCAAGAACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CCA 72 bp | TCCATGTACATGGCATGGTACAGGTCGATGTCTTTCTaGGTCGGGTGCTCCAGCTTGGGGACAGTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: SMYMAWYRSMSF*VGCSSLGTVMG Trigger: GCCCATCACTGTCCCCAAGCTGGAGCACCCGACCCAGAAAGACATCGACCTGTACCATGCCATGTACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CAA 72 bp | AGCTCCGGGCAGCCCACAGCACCAGAGGCAAGTAGGTaGGGCAAGTTAAAGCTAGCACCAGGAAGGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSGQPTAPEASR*GKLKLAPGRIG Trigger: TCCTATCCTTCCTGGTGCTAGCTTTAACTTGCCCAACCTACTTGCCTCTGGTGCTGTGGGCTGCCCGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208591.2 |
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| CDS CCA 72 bp | CCATGGAAGATGCAGGGGGCGAAACCAATATACTTCTaGAACTTCTTCTGGACCCATCGGCCCCAGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: PWKMQGAKPIYF*NFFWTHRPQEP Trigger: GGGTTCCTGGGGCCGATGGGTCCAGAAGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CCA 72 bp | CAGGGGGCGAAACCAATATACTTCTGGAACTTCTTCTaGACCCATCGGCCCCAGGAACCCTCCTCAAAGATC | + |
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Preference number: 6 (lower is better) Translates to: QGAKPIYFWNFF*THRPQEPSSKI Trigger: GATCTTTGAGGAGGGTTCCTGGGGCCGATGGGTCCAGAAGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS TCA 72 bp | CATTCTTGGAGAGCAAGTAGTCTATGGTGTCTCGGTTaGCAGGGCAGATGCCTCCAGACATCAGGTACTCGC | + |
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Preference number: 6 (lower is better) Translates to: HSWRASSLWCLG*QGRCLQTSGTR Trigger: GCGAGTACCTGATGTCTGGAGGCATCTGCCCTGTCAACCGAGACACCATAGACTACTTGCTCTCCAAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS GCA 72 bp | AGGTGTCAGAGGAGAAGAGGCCTCGGCCATGGAAGATaGAGGGGGCGAAACCAATATACTTCTGGAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: RCQRRRGLGHGR*RGRNQYTSGTS Trigger: AGAAGTTCCAGAAGTATATTGGTTTCGCCCCCTGCATCTTCCATGGCCGAGGCCTCTTCTCCTCTGACACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CCA 72 bp | TGCCATGGGGGTGGTATCCAAAGATATAGTTCCTGGTaGTCAGCAGGTTGTGTGTCTTCACCAGCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: CHGGGIQRYSSW*SAGCVSSPAGW Trigger: CCATCCAGCTGGTGAAGACACACAACCTGCTGACCACCAGGAACTATATCTTTGGATACCACCCCCATGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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| CDS CCA 72 bp | GATTGTCAAAGAGCTTCACCAGGGCCTCCATGTACATaGCATGGTACAGGTCGATGTCTTTCTGGGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: DCQRASPGPPCT*HGTGRCLSGSG Trigger: ACCCGACCCAGAAAGACATCGACCTGTACCATGCCATGTACATGGAGGCCCTGGTGAAGCTCTTTGACAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033001.6 |
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