Pregenerated sensors for DGAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022555Ensembl transcript IDs: ENSMUST00000023214.11
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGTTTTAGACAGCACTTTATTGATACCCTCAGCCCCTaGACAACACAGACTCCCAGCACTGGCTCATACCAG | + |
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Preference number: 3 (lower is better) Translates to: GFRQHFIDTLSP*TTQTPSTGSYQ Trigger: CTGGTATGAGCCAGTGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | AGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGGGTCCCGGGTATGGGCTaGAGCCGGAGCCGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SQEPLQNSRPRLGRAGLWVPGMG*SRSRSR Trigger: CCGGCTCCGGCTCCGGCTCCAGCCCATACCCGGGAC...CCAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | CCCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGTCTTTGTCCCGGGTATaGGCTGGAGCCGGAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PHRGREASQTRRSVQAARSLSRV*AGAGAG Trigger: TCCGGCTCCGGCTCCAGCCCATACCCGGGACAAAGA...CCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGAGACAGCTTTGGCCTTaGCCCTTCGCTGGCGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QPGTPPELQAQVREGWPLRQLWP*PFAGGT Trigger: GGTGCCGCCAGCGAAGGGTCAAGGCCAAAGCTGTCT...CAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGAAGTCGTGGACATACATaGGCACAGCCACCGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PIGAERPPRLGGVCRQPGSRGHT*AQPPVA Trigger: GGCAACCGGTGGCTGTGCTCATGTATGTCCACGACT...TCCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | CCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGATGTCAGGGCACCCACTaGCAGGCGCTTCTCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: PIGAERPPRLGGVCRQPGCQGTH*QALLNL Trigger: CAGATTGAGAAGCGCCTGGCAGTGGGTGCCCTGACA...TCCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGCTGGGGCATCGTAGTTaGGCACGTAGTAGTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QPGTPPELQAQVREGWPLLGHRS*ARSSRG Trigger: TCCACGACTACTACGTGCTCAACTACGATGCCCCAG...CAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGGCTCTGCCACAGCATTaGGACAGGAGTGGAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QPGTPPELQAQVREGWPLALPQH*DRSGKT Trigger: GGTTTTTCCACTCCTGTCTCAATGCTGTGGCAGAGC...CAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | CCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGACTGATGCACCACTTGTaGACGGGGATATTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: PIGAERPPRLGGVCRQPGLMHHL*TGIFQF Trigger: GAACTGGAATATCCCCGTGCACAAGTGGTGCATCAG...TCCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | AGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGGCCCACACAGCTGCATTaGCATAGTTCCCTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQEPLQNSRPRLGRAGLWPTQLH*HSSLGR Trigger: TCTTCCAAGGGAACTATGGCAATGCAGCTGTGTGGG...CCAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CCCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGCTCATGGAAGAAGGCTaGGGTCAAAAATACTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PHRGREASQTRRSVQAARLMEEG*GQKYSC Trigger: ACAGGAGTATTTTTGACCTCAGCCTTCTTCCATGAG...CCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | AGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGGAACCACTGTCTGAGCTaGACAAAGAATCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQEPLQNSRPRLGRAGLWNHCLS*TKNLAD Trigger: GTCTGCAAGATTCTTTGTTCAGCTCAGACAGTGGTT...CCAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | CCCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGAATAGTCCATATCCTTaGAGGGCTTCATGGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PHRGREASQTRRSVQAARNSPYP*RASWSS Trigger: AGAACTCCATGAAGCCCTTCAAGGATATGGACTATT...CCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCCATCATGGCTGTaGATGCCCAGAGGCGGAACA | + |
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Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQEPSWL*MPRGGT Trigger: TGTTCCGCCTCTGGGCATTCACAGCCATGATGGCTC...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | GCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTATCGCGGTCTCCAAACTaGAGAAGCTCTGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALAHTSAEIQMPSPRAGVSRSPN*RSSATA Trigger: TGCTGTGGCAGAGCTTCTGCAGTTTGGAGACCGCGA...TACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAACATCATGGCTGTGAATaGCCAGAGGCGGAACATCCG | + |
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Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQHHGCE*PEAEHP Trigger: CGGATGTTCCGCCTCTGGGCATTCACAGCCATGATG...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTAGGCAACAGAGACACCACCTaGATAGGATCCACCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LAHTSAEIQMPSPRAGVGNRDTT*IGSTRM Trigger: CATCCTGGTGGATCCTATCCAGGTGGTGTCTCTGTT...GCCTACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTAGGCGGCTTCATGGAGTTCTaGATAGTAGGGACCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHTSAEIQMPSPRAGVGGFMEF*IVGTIH Trigger: GTGGATGGTCCCTACTATCCAGAACTCCATGAAGCC...GCCTACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCACTTTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCAGTAGGTCAGGTTGTCTaGATAGCTCACAGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LDSTLLIPSAPGQHRLPAVGQVV*IAHSLL Trigger: CAGCAAGCTGTGAGCTATCCAGACAACCTGACCTAC...TGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGCTGAAACCACTGTCTaGGCTGAACAAAGAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQAETTV*AEQRIL Trigger: CAAGATTCTTTGTTCAGCTCAGACAGTGGTTTCAGC...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAACTGAACAAAGAATCTTaGAGACGATGGCACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQLNKES*RRWHLR Trigger: TCTGAGGTGCCATCGTCTGCAAGATTCTTTGTTCAG...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | TTAGACAGCACTTTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCAAAACACGGAACCCACTaGAGTGATAGACTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSTLLIPSAPGQHRLPAKHGTH*SDRLNQ Trigger: CTGGTTGAGTCTATCACTCCAGTGGGTTCCGTGTTT...TGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAACTCACTAGGTACTCATaGAAGAAGGCTGAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQLTRYS*KKAEVK Trigger: TTTGACCTCAGCCTTCTTCCATGAGTACCTAGTGAG...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR TCA 90 bp | TTAGACAGCACTTTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCAAGGCGCTTCTCAATCTaGAATGCAGCCACAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: LDSTLLIPSAPGQHRLPARRFSI*NAATTK Trigger: TTTTGTTGTGGCTGCATTTCAGATTGAGAAGCGCCT...TGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR GCA 90 bp | ACAGACTCCCAGCACTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAAACAAAAATATTGGATaGAATAATCACGCATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TDSQHWLIPVLRFKCHPQNKNIG*NNHAWG Trigger: GCCCCATGCGTGATTATTGCATCCAATATTTTTGTT...TTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAGTGCTGGGAGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 90 bp | CTTGCAGACGATGGCACCTCAGATCCCAGTAGCCGTCGCCCACGCTaGTCCGCCCGTCTTTGTCCCGGGTATGGGCTGGAGCCGGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: LADDGTSDPSSRRPR*SARLCPGYGLEPEP Trigger: CGGCTCCGGCTCCAGCCCATACCCGGGACAAAGACGGGCGGACCAGCGTGGGCGACGGCTACTGGGATCTGAGGTGCCATCGTCTGCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGCTGGTCCGCCCGTCTTaGTCCCGGGTATGGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QPGTPPELQAQVREGWPLLVRPS*SRVWAG Trigger: TCCAGCCCATACCCGGGACAAAGACGGGCGGACCAG...CAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGAGCTGAACAAAGAATCTaGCAGACGATGGCACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PIGAERPPRLGGVCRQPGAEQRI*QTMAPQ Trigger: CTGAGGTGCCATCGTCTGCAAGATTCTTTGTTCAGC...TCCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CCCATAGGGGCAGAGAGGCCTCCCAGACTAGGAGGAGTGTGCAGGCAGCCAGGAAGCTCTGCCACAGCATaGAGACAGGAGTGGAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: PIGAERPPRLGGVCRQPGSSATA*RQEWKN Trigger: GTTTTTCCACTCCTGTCTCAATGCTGTGGCAGAGCT...TCCTGGCTGCCTGCACACTCCTCCTAGTCTGGGAGGCCTCTCTGCCCCTATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS GCA 90 bp | GAGCACAGCCACCGGTTGCCCAATGATGAGTGTCACCCACACAGCTaGATTGCCATAGTTCCCTTGGAAGAATCGGCCCACAATCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: EHSHRLPNDECHPHS*IAIVPLEESAHNPG Trigger: GCCTGGATTGTGGGCCGATTCTTCCAAGGGAACTATGGCAATGCAGCTGTGTGGGTGACACTCATCATTGGGCAACCGGTGGCTGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTAGGCTGGATAGCTCACAGCTaGCTGGGCAGCAGCCCCACT | + |
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Preference number: 5 (lower is better) Translates to: LAHTSAEIQMPSPRAGVGWIAHS*LGSSPT Trigger: AGTGGGGCTGCTGCCCAGCAAGCTGTGAGCTATCCA...GCCTACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | TTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCACTGGCTCATACCGTCCTGGCCACCCATTaGCTGCTGCCATGTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLIPSAPGQHRLPALAHTVLATH*LLPCLS Trigger: GCTCAGACATGGCAGCAGCAAATGGGTGGCCAGGAC...GGTATGAGCCAGTGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | TTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCACTGGCTCATACCCCTGTAGAGACAGCTTaGGCCTTGACCCTTCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLIPSAPGQHRLPALAHTPVETA*ALTLRW Trigger: CCAGCGAAGGGTCAAGGCCAAAGCTGTCTCTACAGG...GGTATGAGCCAGTGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTAGGCAGGGACCATCCACTGTaGGATCAGCCCCACTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LAHTSAEIQMPSPRAGVGRDHPL*DQPHLK Trigger: CTTCAAGTGGGGCTGATCCAACAGTGGATGGTCCCT...GCCTACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | AGCCAGGAACCCCTCCAGAACTCCAGGCCCAGGTTAGGGAGGGCTGGCCTTTGGACCAGGATGCCATACTaGATAAGGTTCTCTAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: SQEPLQNSRPRLGRAGLWTRMPY*IRFSKN Trigger: ATTTTTAGAGAACCTTATCAAGTATGGCATCCTGGT...CCAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCTGGAGGGGTTCCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 90 bp | TGCACCACTTGTGCACGGGGATATTCCAGTTCTGCCAAAAGTAGGTaGCAGACTCAGCATTCCACCAATCTCTGTAGAACTCGCGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: CTTCARGYSSSAKSR*QTQHSTNLCRTRGL Trigger: GAGACCGCGAGTTCTACAGAGATTGGTGGAATGCTGAGTCTGTCACCTACTTTTGGCAGAACTGGAATATCCCCGTGCACAAGTGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS GCA 90 bp | CTGCTCTGTCAGGGCACCCACTGCCAGGCGCTTCTCAATCTGAAATaGAGCCACAACAAAAATATTGGATGCAATAATCACGCATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LLCQGTHCQALLNLK*SHNKNIGCNNHAWG Trigger: GCCCCATGCGTGATTATTGCATCCAATATTTTTGTTGTGGCTGCATTTCAGATTGAGAAGCGCCTGGCAGTGGGTGCCCTGACAGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCACTTTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCATGTCTGATGCACCACTaGTGCACGGGGATATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LDSTLLIPSAPGQHRLPACLMHH*CTGIFQ Trigger: CTGGAATATCCCCGTGCACAAGTGGTGCATCAGACA...TGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 90 bp | CCCATCTGCTCTGTCAGGGCACCCACTGCCAGGCGCTTCTCAATCTaGAATGCAGCCACAACAAAAATATTGGATGCAATAATCACGCAT | + |
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Preference number: 5 (lower is better) Translates to: PICSVRAPTARRFSI*NAATTKILDAIITH Trigger: ATGCGTGATTATTGCATCCAATATTTTTGTTGTGGCTGCATTTCAGATTGAGAAGCGCCTGGCAGTGGGTGCCCTGACAGAGCAGATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 90 bp | CTGAAATGCAGCCACAACAAAAATATTGGATGCAATAATCACGCATaGGGCAGGCCAGCTGTAGGGGTCCTTCAGAAACAGAGACACCAC | + |
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Preference number: 5 (lower is better) Translates to: LKCSHNKNIGCNNHA*GRPAVGVLQKQRHH Trigger: GTGGTGTCTCTGTTTCTGAAGGACCCCTACAGCTGGCCTGCCCCATGCGTGATTATTGCATCCAATATTTTTGTTGTGGCTGCATTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | TTAGACAGCACTTTATTGATACCCTCAGCCCCTGGACAACACAGACTCCCAGCAATTGCCATAGTTCCCTaGGAAGAATCGGCCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: LDSTLLIPSAPGQHRLPAIAIVP*EESAHN Trigger: ATTGTGGGCCGATTCTTCCAAGGGAACTATGGCAAT...TGCTGGGAGTCTGTGTTGTCCAGGGGCTGAGGGTATCAATAAAGTGCTGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 90 bp | GTTGACATCCCGGTAGGAATAAAGCTTGAGGAACATGATGGAGTATaGTGCCAGAGCAAACACGGAACCCACTGGAGTGATAGACTCAAC | + |
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Preference number: 5 (lower is better) Translates to: VDIPVGIKLEEHDGV*CQSKHGTHWSDRLN Trigger: GTTGAGTCTATCACTCCAGTGGGTTCCGTGTTTGCTCTGGCATCATACTCCATCATGTTCCTCAAGCTTTATTCCTACCGGGATGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 90 bp | CACACACCAATTCAGGATACCACGATAATTGCTGAAACCACTGTCTaGGCTGAACAAAGAATCTTGCAGACGATGGCACCTCAGATCCCA | + |
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Preference number: 5 (lower is better) Translates to: HTPIQDTTIIAETTV*AEQRILQTMAPQIP Trigger: TGGGATCTGAGGTGCCATCGTCTGCAAGATTCTTTGTTCAGCTCAGACAGTGGTTTCAGCAATTATCGTGGTATCCTGAATTGGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS-3UTR CAA 90 bp | CTGGCTCATACCAGTGCTGAGATTCAAATGCCATCCCCAAGAGCAGGAGTAGGCGCCACAACAAAAATATaGGATGCAATAATCACGCAT | + |
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Preference number: 5 (lower is better) Translates to: LAHTSAEIQMPSPRAGVGATTKI*DAIITH Trigger: ATGCGTGATTATTGCATCCAATATTTTTGTTGTGGC...GCCTACTCCTGCTCTTGGGGATGGCATTTGAATCTCAGCACTGGTATGAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 72 bp | CACGCTGGTCCGCCCGTCTTTGTCCCGGGTATGGGCTaGAGCCGGAGCCGGAGCCGGCGCGTCACCCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: HAGPPVFVPGMG*SRSRSRRVTPG Trigger: GCCGGGGGTGACGCGCCGGCTCCGGCTCCGGCTCCAGCCCATACCCGGGACAAAGACGGGCGGACCAGCGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 72 bp | TCGCCCACGCTGGTCCGCCCGTCTTTGTCCCGGGTATaGGCTGGAGCCGGAGCCGGAGCCGGCGCGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SPTLVRPSLSRV*AGAGAGAGASP Trigger: GGGTGACGCGCCGGCTCCGGCTCCGGCTCCAGCCCATACCCGGGACAAAGACGGGCGGACCAGCGTGGGCGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 72 bp | ACCTCGTCCTCTTCTACCTTGGGCCCACTACCACCCTaGACGGAAACCCGCGAGCCGGTCCTCCGACGCCGA | + |
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Preference number: 6 (lower is better) Translates to: TSSSSTLGPLPP*TETREPVLRRR Trigger: TCGGCGTCGGAGGACCGGCTCGCGGGTTTCCGTCCAGGGTGGTAGTGGGCCCAAGGTAGAAGAGGACGAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 90 bp | TGCTGGGCAGCAGCCCCACTGACCTTCTTCCCTGTAGAGACAGCTTaGGCCTTGACCCTTCGCTGGCGGCACCACAGGTTGACATCCCGG | + |
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Preference number: 6 (lower is better) Translates to: CWAAAPLTFFPVETA*ALTLRWRHHRLTSR Trigger: CCGGGATGTCAACCTGTGGTGCCGCCAGCGAAGGGTCAAGGCCAAAGCTGTCTCTACAGGGAAGAAGGTCAGTGGGGCTGCTGCCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | GCAGCCCCACTGACCTTCTTCCCTGTAGAGACAGCTTaGGCCTTGACCCTTCGCTGGCGGCACCACAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AAPLTFFPVETA*ALTLRWRHHRL Trigger: CAACCTGTGGTGCCGCCAGCGAAGGGTCAAGGCCAAAGCTGTCTCTACAGGGAAGAAGGTCAGTGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 72 bp | GTTCCCTTGGAAGAATCGGCCCACAATCCAGGCCAGTaGGACCTGAGCCATCATGGCTGTGAATGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VPLEESAHNPGQ*DLSHHGCECPE Trigger: CTCTGGGCATTCACAGCCATGATGGCTCAGGTCCCACTGGCCTGGATTGTGGGCCGATTCTTCCAAGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | CCACTGACCTTCTTCCCTGTAGAGACAGCTTTGGCCTaGACCCTTCGCTGGCGGCACCACAGGTTGACATCC | + |
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Preference number: 6 (lower is better) Translates to: PLTFFPVETALA*TLRWRHHRLTS Trigger: GGATGTCAACCTGTGGTGCCGCCAGCGAAGGGTCAAGGCCAAAGCTGTCTCTACAGGGAAGAAGGTCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | ATCTCGGTAGGTCAGGTTGTCTGGATAGCTCACAGCTaGCTGGGCAGCAGCCCCACTGACCTTCTTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ISVGQVVWIAHS*LGSSPTDLLPC Trigger: ACAGGGAAGAAGGTCAGTGGGGCTGCTGCCCAGCAAGCTGTGAGCTATCCAGACAACCTGACCTACCGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | GAGTGTCACCCACACAGCTGCATTGCCATAGTTCCCTaGGAAGAATCGGCCCACAATCCAGGCCAGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ECHPHSCIAIVP*EESAHNPGQWD Trigger: GTCCCACTGGCCTGGATTGTGGGCCGATTCTTCCAAGGGAACTATGGCAATGCAGCTGTGTGGGTGACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 90 bp | CCCAATGATGAGTGTCACCCACACAGCTGCATTGCCATAGTTCCCTaGGAAGAATCGGCCCACAATCCAGGCCAGTGGGACCTGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PNDECHPHSCIAIVP*EESAHNPGQWDLSH Trigger: ATGGCTCAGGTCCCACTGGCCTGGATTGTGGGCCGATTCTTCCAAGGGAACTATGGCAATGCAGCTGTGTGGGTGACACTCATCATTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS GCA 72 bp | CACCGGTTGCCCAATGATGAGTGTCACCCACACAGCTaGATTGCCATAGTTCCCTTGGAAGAATCGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: HRLPNDECHPHS*IAIVPLEESAH Trigger: GTGGGCCGATTCTTCCAAGGGAACTATGGCAATGCAGCTGTGTGGGTGACACTCATCATTGGGCAACCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 90 bp | GTAATAGAGATCTCGGTAGGTCAGGTTGTCTGGATAGCTCACAGCTaGCTGGGCAGCAGCCCCACTGACCTTCTTCCCTGTAGAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: VIEISVGQVVWIAHS*LGSSPTDLLPCRDS Trigger: GCTGTCTCTACAGGGAAGAAGGTCAGTGGGGCTGCTGCCCAGCAAGCTGTGAGCTATCCAGACAACCTGACCTACCGAGATCTCTATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | GTAGTAGTCGTGGACATACATGAGCACAGCCACCGGTaGCCCAATGATGAGTGTCACCCACACAGCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: VVVVDIHEHSHR*PNDECHPHSCI Trigger: AATGCAGCTGTGTGGGTGACACTCATCATTGGGCAACCGGTGGCTGTGCTCATGTATGTCCACGACTACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 90 bp | GTTGAGCACGTAGTAGTCGTGGACATACATGAGCACAGCCACCGGTaGCCCAATGATGAGTGTCACCCACACAGCTGCATTGCCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: VEHVVVVDIHEHSHR*PNDECHPHSCIAIV Trigger: AACTATGGCAATGCAGCTGTGTGGGTGACACTCATCATTGGGCAACCGGTGGCTGTGCTCATGTATGTCCACGACTACTACGTGCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 72 bp | CCGGTAGGAATAAAGCTTGAGGAACATGATGGAGTATaGTGCCAGAGCAAACACGGAACCCACTGGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: PVGIKLEEHDGV*CQSKHGTHWSD Trigger: ATCACTCCAGTGGGTTCCGTGTTTGCTCTGGCATCATACTCCATCATGTTCCTCAAGCTTTATTCCTACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS GCA 72 bp | TCTGTAGAACTCGCGGTCTCCAAACTGCAGAAGCTCTaGCACAGCATTGAGACAGGAGTGGAAAAACCAATA | + |
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Preference number: 6 (lower is better) Translates to: SVELAVSKLQKL*HSIETGVEKPI Trigger: TATTGGTTTTTCCACTCCTGTCTCAATGCTGTGGCAGAGCTTCTGCAGTTTGGAGACCGCGAGTTCTACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CCA 72 bp | AGCCACAACAAAAATATTGGATGCAATAATCACGCATaGGGCAGGCCAGCTGTAGGGGTCCTTCAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: SHNKNIGCNNHA*GRPAVGVLQKQ Trigger: CTGTTTCTGAAGGACCCCTACAGCTGGCCTGCCCCATGCGTGATTATTGCATCCAATATTTTTGTTGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 72 bp | TCTGTCAGGGCACCCACTGCCAGGCGCTTCTCAATCTaGAATGCAGCCACAACAAAAATATTGGATGCAATA | + |
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Preference number: 6 (lower is better) Translates to: SVRAPTARRFSI*NAATTKILDAI Trigger: TATTGCATCCAATATTTTTGTTGTGGCTGCATTTCAGATTGAGAAGCGCCTGGCAGTGGGTGCCCTGACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 72 bp | TGTGCACGGGGATATTCCAGTTCTGCCAAAAGTAGGTaGCAGACTCAGCATTCCACCAATCTCTGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: CARGYSSSAKSR*QTQHSTNLCRT Trigger: AGTTCTACAGAGATTGGTGGAATGCTGAGTCTGTCACCTACTTTTGGCAGAACTGGAATATCCCCGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS GCA 72 bp | CTCAATCTGAAATGCAGCCACAACAAAAATATTGGATaGAATAATCACGCATGGGGCAGGCCAGCTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: LNLKCSHNKNIG*NNHAWGRPAVG Trigger: CCCTACAGCTGGCCTGCCCCATGCGTGATTATTGCATCCAATATTTTTGTTGTGGCTGCATTTCAGATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS TCA 72 bp | ATTCAGGATACCACGATAATTGCTGAAACCACTGTCTaGGCTGAACAAAGAATCTTGCAGACGATGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: IQDTTIIAETTV*AEQRILQTMAP Trigger: AGGTGCCATCGTCTGCAAGATTCTTTGTTCAGCTCAGACAGTGGTTTCAGCAATTATCGTGGTATCCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 90 bp | AGAAACAGAGACACCACCTGGATAGGATCCACCAGGATGCCATACTaGATAAGGTTCTCTAAAAATAACCTTGCATTACTCAGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: RNRDTTWIGSTRMPY*IRFSKNNLALLRIS Trigger: GCTGATCCTGAGTAATGCAAGGTTATTTTTAGAGAACCTTATCAAGTATGGCATCCTGGTGGATCCTATCCAGGTGGTGTCTCTGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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| CDS CAA 72 bp | GACACCACCTGGATAGGATCCACCAGGATGCCATACTaGATAAGGTTCTCTAAAAATAACCTTGCATTACTC | + |
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Preference number: 6 (lower is better) Translates to: DTTWIGSTRMPY*IRFSKNNLALL Trigger: GAGTAATGCAAGGTTATTTTTAGAGAACCTTATCAAGTATGGCATCCTGGTGGATCCTATCCAGGTGGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023214.11 |
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