Pregenerated sensors for DFFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028974Ensembl transcript IDs: ENSMUST00000030816.4, ENSMUST00000103216.10
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCCAGGCTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCACATaGCTGCTGAGAGCTGTCTGTAACTCCAGTTCCAGGGGACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: WPGFQNSQSQFPAPT*LLRAVCNSSSRGPD Trigger: GTCAGGTCCCCTGGAACTGGAGTTACAGACAGCTCTCAGCAGCCATGTGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAGCCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 90 bp | CTGGCAGCTGAGCCGGCCTGTGGAGGTAAAGGAAAGCCACATACATaGCTCTGCACCTCCAAACATACGTCCATGGAAGGCATTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LAAEPACGGKGKPHT*LCTSKHTSMEGILC Trigger: GCAGAGAATGCCTTCCATGGACGTATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCGGCTCAGCTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR CCA 90 bp | CTAACACATGCTAAGCACATTCCGGGAGCTGGAGAGATGGCTCAGTaGTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCAGAGTCAATT | + |
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Preference number: 1 (lower is better) Translates to: LTHAKHIPGAGEMAQ*LGALARLPEQPESI Trigger: AATTGACTCTGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGCTCCCGGAATGTGCTTAGCATGTGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR TCA 90 bp | GTGCCTTTAGTCCCAGCACTTAGGAGGCAGAGGCAAATAGATCTCTaGGAGTTCAAGGACAGCCTGGTCTACAGAGAAAGTTCCAGGATA | + |
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Preference number: 1 (lower is better) Translates to: VPLVPALRRQRQIDL*EFKDSLVYRESSRI Trigger: TATCCTGGAACTTTCTCTGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCTATTTGCCTCTGCCTCCTAAGTGCTGGGACTAAAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR GCA 90 bp | GGCGCCTTTTCCCTGAAAGCAGACAGCACTAGAGATTGCAGAAGTTaGAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: GAFSLKADSTRDCRS*RTLSRNSGEKLEVL Trigger: GAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTCTGCTTTCAGGGAAAAGGCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 90 bp | CACGAAGATGTGGGAGGAGCTGTTGATACCAATATTTGGAACTGGTaGTATCAGGCACTACAGGATGTAAAAGCTGCCTGCCGACAGATC | + |
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Preference number: 1 (lower is better) Translates to: HEDVGGAVDTNIWNW*YQALQDVKAACRQI Trigger: GATCTGTCGGCAGGCAGCTTTTACATCCTGTAGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCACATCTTCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 90 bp | AACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTaGAGACAGCAACCTGAGTCGCATTGCATGGGCTCATTTAATGAC | + |
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Preference number: 1 (lower is better) Translates to: NSEQKQRRKTRSALV*RQQPESHCMGSFND Trigger: GTCATTAAATGAGCCCATGCAATGCGACTCAGGTTGCTGTCTGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 90 bp | TTGAGGTACCACGAAGATGTGGGAGGAGCTGTTGATACCAATATTTaGAACTGGTGCTATCAGGCACTACAGGATGTAAAAGCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LRYHEDVGGAVDTNI*NWCYQALQDVKAAC Trigger: GCAGGCAGCTTTTACATCCTGTAGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCACATCTTCGTGGTACCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR TCA 90 bp | TTTTATTTAAGGATTGAGGTACCACGAAGATGTGGGAGGAGCTGTTaGTACCAATATTTGGAACTGGTGCTATCAGGCACTACAGGATGT | + |
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Preference number: 1 (lower is better) Translates to: FYLRIEVPRRCGRSC*YQYLELVLSGTTGC Trigger: ACATCCTGTAGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCACATCTTCGTGGTACCTCAATCCTTAAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGTGCACCCCACCTTCACCCCGACACTCAGTGCTGCATTTCCTTGTCAATGGAGAGATGGCTCAGTaGTTAGGAGCACTGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALCTPPSPRHSVLHFLVNGEMAQ*LGALAR Trigger: CCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCC...ATTGACAAGGAAATGCAGCACTGAGTGTCGGGGTGAAGGTGGGGTGCACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | GTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCAACCATGGAAAGTTACTaGCAGCAAAGCCCGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VRSTGQASRTARVNSQHPTMESY*QQSPSS Trigger: AGAAGACGGGCTTTGCTGTCAGTAACTTTCCATGGT...TGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCAGACAGCCAGTTCCAGGGGACCTaGCACTGTCTTCTGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TLSRNSGEKLEVLWSADSQFQGT*HCLLAF Trigger: GAAGGCCAGAAGACAGTGTCAGGTCCCCTGGAACTG...GCTGTCTGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGACCTGACACTGTCTTCTGGCCTTCATGGACATGAGGTACACAGATATACACTAGAAGAGCACACATaGGGCAGGAGGTGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GDLTLSSGLHGHEVHRYTLEEHT*GRRWVR Trigger: CCTCACCCACCTCCTGCCCCATGTGTGCTCTTCTAG...TGTATATCTGTGTACCTCATGTCCATGAAGGCCAGAAGACAGTGTCAGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGCCTGCCGACAGATCTGCCTCCCGCTGTAGGAGGAGGCAGGTCAATCATAGAGATTGCAGAAGTTaGAGAACTCTGAGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLPADRSASRCRRRQVNHRDCRS*RTLSRN Trigger: GTTTCTGCTCAGAGTTCTGCAACTTCTGCAATCTCT...ATGATTGACCTGCCTCCTCCTACAGCGGGAGGCAGATCTGTCGGCAGGCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCACACCCACATGGCTGCTaGGAGCTGTCTGTAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: CRTLSRNSGEKLEVLWSAHPHGC*ELSVTP Trigger: TGGAGTTACAGACAGCTCTCAGCAGCCATGTGGGTG...TGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGTGCACCCCACCTTCACCCCGACACTCAGTGCTGCATTTCCTTGTCAATGACAGCACTAGAGATTaGAGAAGTTGCAGAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALCTPPSPRHSVLHFLVNDSTRD*RSCRTL Trigger: CAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTC...ATTGACAAGGAAATGCAGCACTGAGTGTCGGGGTGAAGGTGGGGTGCACAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR GCA 90 bp | GGTCTACAGAGAAAGTTCCAGGATAGCCAGGACTACCTCCCCGCTCAGAAAAGCGGAAAGCCACATACATaGCTCTGCACCTCCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: GLQRKFQDSQDYLPAQKSGKPHT*LCTSKH Trigger: ATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCC...GCTTTTCTGAGCGGGGAGGTAGTCCTGGCTATCCTGGAACTTTCTCTGTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGACACTCAGTGCTGCATTTCCTTGTCAATGTGAGGCTGGGGTGTGGTTCAGCTTGAGAAGTTCATaGCCACAATTGTTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TPTLSAAFPCQCEAGVWFSLRSS*PQLLLL Trigger: CAGCAGCAACAATTGTGGCCATGAACTTCTCAAGCT...GAACCACACCCCAGCCTCACATTGACAAGGAAATGCAGCACTGAGTGTCGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGAAAGCAGACAGCACTAGAGATTGCAGAAGTTGCAGAACTCTGAGCAGAGTTCAAGTTGGAGAGTaGGGACATCAAGTCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: SLKADSTRDCRSCRTLSRVQVGE*GHQVLT Trigger: AGTTAGGACTTGATGTCCTCACTCTCCAACTTGAAC...TCTGCTCAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTCTGCTTTCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCCCGACACTCAAACATATTAGAAAATaGAACGGAGTTTCACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GRSIMLICSVHPTFTPTLKHIRK*NGVSQW Trigger: CCACTGTGAAACTCCGTTCCATTTTCTAATATGTTT...GAGTGTCGGGGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCACAAGTCCTAACTATATaGGAGGTTTTCACTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: CRTLSRNSGEKLEVLWSAQVLTI*EVFTAL Trigger: AAGGGCAGTGAAAACCTCTCATATAGTTAGGACTTG...TGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCGCGGTAACAGGACCATaGAAAGTTACTGACAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCAVTGP*KVTDSK Trigger: TTTGCTGTCAGTAACTTTCCATGGTCCTGTTACCGC...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGCTGCATTTATTAGCTTaGGAAGTTCATGGCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: RSCRTLSRNSGEKLEVLWLHLLA*EVHGHN Trigger: ATTGTGGCCATGAACTTCTCAAGCTAATAAATGCAG...CCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CCA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCGCCTCAGAGCACTTGTaGATCTTTGACTCTTTATCC | + |
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Preference number: 2 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTASEHL*IFDSLS Trigger: GGATAAAGAGTCAAAGATCCACAAGTGCTCTGAGGC...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR TCA 72 bp | GGAGGTACTAGGTACACAGGGGCGAGACCACCACCCTaGTGGACTCCCCTGTTGAGTGCTAGCTCTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GGTRYTGARPPP*WTPLLSASSLL Trigger: GAGCAGAGAGCTAGCACTCAACAGGGGAGTCCATCAGGGTGGTGGTCTCGCCCCTGTGTACCTAGTACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR CCA 72 bp | GCTAAGCACATTCCGGGAGCTGGAGAGATGGCTCAGTaGTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: AKHIPGAGEMAQ*LGALARLPEQP Trigger: TGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGCTCCCGGAATGTGCTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 72 bp | GAGCCGGCCTGTGGAGGTAAAGGAAAGCCACATACATaGCTCTGCACCTCCAAACATACGTCCATGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EPACGGKGKPHT*LCTSKHTSMEG Trigger: GCCTTCCATGGACGTATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCCCGACACTCTCATGGCCACAATTGTaGCTGCTGGGCGCCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: GRSIMLICSVHPTFTPTLSWPQL*LLGAFS Trigger: AGAAAAGGCGCCCAGCAGCAACAATTGTGGCCATGA...GAGTGTCGGGGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 72 bp | TTCCAGAACAGCCAGAGTCAATTCCCAGCACCCACATaGCTGCTGAGAGCTGTCTGTAACTCCAGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: FQNSQSQFPAPT*LLRAVCNSSSR Trigger: CCTGGAACTGGAGTTACAGACAGCTCTCAGCAGCCATGTGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 72 bp | CCCTTGTGTGCGACTGTCCTGGCCTCAGAGCACTTGTaGATCTTTGACTCTTTATCCCTTGAAGCCACCGCA | + |
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Preference number: 3 (lower is better) Translates to: PLCATVLASEHL*IFDSLSLEATA Trigger: TGCGGTGGCTTCAAGGGATAAAGAGTCAAAGATCCACAAGTGCTCTGAGGCCAGGACAGTCGCACACAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR TCA 72 bp | TACAGTAAAGGAGGTAGAGAGGCACATGCACAGCCCTaGACCGCTTTCCTGGAGCTAGAAGAGCACACATGG | + |
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Preference number: 3 (lower is better) Translates to: YSKGGREAHAQP*TAFLELEEHTW Trigger: CCATGTGTGCTCTTCTAGCTCCAGGAAAGCGGTTCAGGGCTGTGCATGTGCCTCTCTACCTCCTTTACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 72 bp | GGCGCCTTTTCCCTGAAAGCAGACAGCACTAGAGATTaGAGAAGTTGCAGAACTCTGAGCAGAAACAGCGGA | + |
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Preference number: 3 (lower is better) Translates to: GAFSLKADSTRD*RSCRTLSRNSG Trigger: TCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTCTGCTTTCAGGGAAAAGGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR GCA 72 bp | GCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTaGACCTCCAAACATACGTCCATGGAAGGCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: ACGGKGKPHTCL*TSKHTSMEGIL Trigger: GAGAATGCCTTCCATGGACGTATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR CCA 72 bp | CTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTaGTCTGCAGACAGCAACCTGAGTCGCATTGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LSRNSGEKLEVL*SADSNLSRIAW Trigger: CCATGCAATGCGACTCAGGTTGCTGTCTGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR TCA 72 bp | AGGGGACCTGACACTGTCTTCTGGCCTTCATGGACATaGGGTACACAGATATACACGCAGGCAAAACACTTC | + |
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Preference number: 3 (lower is better) Translates to: RGPDTVFWPSWT*GTQIYTQAKHF Trigger: GAAGTGTTTTGCCTGCGTGTATATCTGTGTACCTCATGTCCATGAAGGCCAGAAGACAGTGTCAGGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR TCA 72 bp | ATATTAAGTAAGATGTTTGCACATGCTCTGGCTGTGTaGAAAGGCAAACTGGCAGCTGAGCCGGCCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: ILSKMFAHALAV*KGKLAAEPACG Trigger: TCCACAGGCCGGCTCAGCTGCCAGTTTGCCTTTTCACACAGCCAGAGCATGTGCAAACATCTTACTTAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR TCA 72 bp | GGCGTGCGCCACCACCACCTGGCTATGATGTGCCCTTaGTGGTACATGTTTACACATCTTTTTAAAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: GVRHHHLAMMCP*WYMFTHLFKIS Trigger: GGAGATTTTAAAAAGATGTGTAAACATGTACCATCAAGGGCACATCATAGCCAGGTGGTGGTGGCGCACGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR GCA 72 bp | GTGGGAGGAGCTGTTGATACCAATATTTGGAACTGGTaGTATCAGGCACTACAGGATGTAAAAGCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: VGGAVDTNIWNW*YQALQDVKAAC Trigger: GCAGGCAGCTTTTACATCCTGTAGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CAA 90 bp | GTAGGAGGAGGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCACTGCATTTATTAGCTaGAGAAGTTCATGGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: VGGGRSIMLICSVHPTFTTAFIS*RSSWPQ Trigger: TTGTGGCCATGAACTTCTCAAGCTAATAAATGCAGT...GGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCCTCCTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGAGGTTTTCACTGCCCTaGACCAGAACTTTCACTTGG | + |
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Preference number: 3 (lower is better) Translates to: RSCRTLSRNSGEKLEVLWRFSLP*TRTFTW Trigger: CCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAACCT...CCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR TCA 72 bp | AGGATTGAGGTACCACGAAGATGTGGGAGGAGCTGTTaGTACCAATATTTGGAACTGGTGCTATCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: RIEVPRRCGRSC*YQYLELVLSGT Trigger: AGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCACATCTTCGTGGTACCTCAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 72 bp | AGCCACCGCAGAAGCTTCAGCCCACAGTTCTCCGACTaGGTCATTATCAATTTGGACAAGAGACTAATGTTT | + |
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Preference number: 3 (lower is better) Translates to: SHRRSFSPQFSD*VIINLDKRLMF Trigger: AAACATTAGTCTCTTGTCCAAATTGATAATGACCCAGTCGGAGAACTGTGGGCTGAAGCTTCTGCGGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| 3UTR GCA 72 bp | TCCCTGAAAGCAGACAGCACTAGAGATTGCAGAAGTTaGAGAACTCTGAGCAGAAACAGCGGAGAAAAACTA | + |
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Preference number: 3 (lower is better) Translates to: SLKADSTRDCRS*RTLSRNSGEKL Trigger: TAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTCTGCTTTCAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 72 bp | CAAACAGCAACTGCATTTATTAGCTTGAGAAGTTCATaGCCACAATTGTTGCTGCTGGGCGCCTTTTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: QTATAFISLRSS*PQLLLLGAFSL Trigger: TAGAGAAAAGGCGCCCAGCAGCAACAATTGTGGCCATGAACTTCTCAAGCTAATAAATGCAGTTGCTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR CCA 72 bp | CACGAAGATGTGGGAGGAGCTGTTGATACCAATATTTaGAACTGGTGCTATCAGGCACTACAGGATGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: HEDVGGAVDTNI*NWCYQALQDVK Trigger: TTTTACATCCTGTAGTGCCTGATAGCACCAGTTCCAAATATTGGTATCAACAGCTCCTCCCACATCTTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| 3UTR-3UTR CAA 90 bp | TATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCCAGCATCAGGAGGTACTATTGACTCTTTATCCCTaGAAGCCACCGCAGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: YAQVNIIPFPSTQHQEVLLTLYP*KPPQKL Trigger: AAGCTTCTGCGGTGGCTTCAAGGGATAAAGAGTCAA...TAGTACCTCCTGATGCTGGGTAGAAGGGAAGGGAATTATATTAACTTGAGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR TCA 90 bp | AAGCTGCCTGCCGACAGATCTGCCTCCCGCTGTAGGAGGAGGCAGGTCAATCATGCTGCCACGCCGTGCTaGTCGCGGCTGTGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: KLPADRSASRCRRRQVNHAATPC*SRLWLR Trigger: CCGCAACCACAGCCGCGATCAGCACGGCGTGGCAGC...ATGATTGACCTGCCTCCTCCTACAGCGGGAGGCAGATCTGTCGGCAGGCAGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR GCA 90 bp | AAGCACATTCCGGGAGCTGGAGAGATGGCTCAGTGGTTAGGAGCACTGGCCAGGCTCGAGACTGGAGGCTaGCACGCCGTGCTGATCGCG | + |
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Preference number: 4 (lower is better) Translates to: KHIPGAGEMAQWLGALARLETGG*HAVLIA Trigger: CGCGATCAGCACGGCGTGGCAGCCTCCAGTCTCGAG...CCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGCTCCCGGAATGTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | ACCGCTTTCCTGGAGCTAGAAGAGCACACATGGGGCAGGAGGTGGGTGAGGGGGTGGTCAAGCACCTGCTaGAGTGTGCTCTGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAFLELEEHTWGRRWVRGWSSTC*SVLCSP Trigger: GGGGCTGCAGAGCACACTCCAGCAGGTGCTTGACCA...CCCCCTCACCCACCTCCTGCCCCATGTGTGCTCTTCTAGCTCCAGGAAAGCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | ACCGCTTTCCTGGAGCTAGAAGAGCACACATGGGGCAGGAGGTGGGTGAGGGGGGTTCCAGGAGCTGCTTaGACTGGCGGGCTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAFLELEEHTWGRRWVRGVPGAA*TGGLPL Trigger: GAGAGGAAGCCCGCCAGTCCAAGCAGCTCCTGGAAC...CCCCCTCACCCACCTCCTGCCCCATGTGTGCTCTTCTAGCTCCAGGAAAGCGGT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR GCA 90 bp | GTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCAAAGCTCTGCACTTGCTaGAGCCGCAGGGCGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSTGQASRTARVNSQHPKLCTC*SRRASS Trigger: GGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTT...TGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | GTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCAACTTCACCCCTGCCCTaGTGTCCGGCTCATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSTGQASRTARVNSQHPTSPLP*CPAHLP Trigger: AGGCAGATGAGCCGGACAGCAGGGCAGGGGTGAAGT...TGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCACATGGCTGCTGAGAGCTGTGCACCTGCTGGAGTGTaGTCTGCAGCCCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPEQPESIPSTHMAAESCAPAGV*SAAPGQ Trigger: CTGTCCAGGGGCTGCAGAGCACACTCCAGCAGGTGC...ACAGCTCTCAGCAGCCATGTGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR GCA 90 bp | TCACTTCGAGCTTATCGTTGGTGGCGCGTGCCTTTAGTCCCAGCACTTAGGAGGGCACCTGCTGGAGTGTaGTCTGCAGCCCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYRWWRVPLVPALRRAPAGV*SAAPGQ Trigger: CTGTCCAGGGGCTGCAGAGCACACTCCAGCAGGTGC...CCTCCTAAGTGCTGGGACTAAAGGCACGCGCCACCAACGATAAGCTCGAAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR CCA 90 bp | ACCCCGACACTCAGTGCTGCATTTCCTTGTCAATGTGAGGCTGGGGTGTGGTTCTCAGCTCCTCGAGACTaGAGGCTGCCACGCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTLSAAFPCQCEAGVWFSAPRD*RLPRRA Trigger: AGCACGGCGTGGCAGCCTCCAGTCTCGAGGAGCTGA...GAACCACACCCCAGCCTCACATTGACAAGGAAATGCAGCACTGAGTGTCGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | TCACTTCGAGCTTATCGTTGGTGGCGCGTGCCTTTAGTCCCAGCACTTAGGAGGTCAGCTCCTCGAGACTaGAGGCTGCCACGCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYRWWRVPLVPALRRSAPRD*RLPRRA Trigger: AGCACGGCGTGGCAGCCTCCAGTCTCGAGGAGCTGA...CCTCCTAAGTGCTGGGACTAAAGGCACGCGCCACCAACGATAAGCTCGAAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR TCA 90 bp | GTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCACTTTGGCAGAGTTCCTaGGCCAGCTCTGCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRSTGQASRTARVNSQHPLWQSS*ASSAHG Trigger: CCCATGTGCAGAGCTGGCTCAGGAACTCTGCCAAAG...TGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGCAAACTGGCAGCTGAGCCGGCCTGTGGAGGTAAAGGAAAGCCACATAACTTCACCCCTGCCCTaGTGTCCGGCTCATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKANWQLSRPVEVKESHITSPLP*CPAHLP Trigger: AGGCAGATGAGCCGGACAGCAGGGCAGGGGTGAAGT...TATGTGGCTTTCCTTTACCTCCACAGGCCGGCTCAGCTGCCAGTTTGCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGGAGGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCAGGAGCTGCTTGGACTaGCGGGCTTCCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRSIMLICSVHPTFTRSCLD*RASSLW Trigger: CCAGAGAGAGGAAGCCCGCCAGTCCAAGCAGCTCCT...GGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCCTCCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | GGTCTACAGAGAAAGTTCCAGGATAGCCAGGACTACCTCCCCGCTCAGAAAAGCAGGAGCTGCTTGGACTaGCGGGCTTCCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQRKFQDSQDYLPAQKSRSCLD*RASSLW Trigger: CCAGAGAGAGGAAGCCCGCCAGTCCAAGCAGCTCCT...GCTTTTCTGAGCGGGGAGGTAGTCCTGGCTATCCTGGAACTTTCTCTGTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CCA 90 bp | GGTCTACAGAGAAAGTTCCAGGATAGCCAGGACTACCTCCCCGCTCAGAAAAGCGTTCCAGGAGCTGCTTaGACTGGCGGGCTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQRKFQDSQDYLPAQKSVPGAA*TGGLPL Trigger: GAGAGGAAGCCCGCCAGTCCAAGCAGCTCCTGGAAC...GCTTTTCTGAGCGGGGAGGTAGTCCTGGCTATCCTGGAACTTTCTCTGTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR TCA 90 bp | TCACTTCGAGCTTATCGTTGGTGGCGCGTGCCTTTAGTCCCAGCACTTAGGAGGCACATGGGATGTCGATaGGCGCTTGGAGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYRWWRVPLVPALRRHMGCR*ALGGPL Trigger: AAGAGGACCTCCAAGCGCTCATCGACATCCCATGTG...CCTCCTAAGTGCTGGGACTAAAGGCACGCGCCACCAACGATAAGCTCGAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR GCA 90 bp | CGGCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATAGATCGCGGCTGTGGTTaGGGCGTAGCAGACACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPVEVKESHIHASAPPNIDRGCG*GVADTV Trigger: AACCGTGTCTGCTACGCCGCAACCACAGCCGCGATC...TATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCCCGACACTCGCTGTCCGGCTCATCTaGCTCAAAGGACTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIMLICSVHPTFTPTLAVRLI*LKGLLG Trigger: TCCCAAGAGTCCTTTGAGGCAGATGAGCCGGACAGC...GAGTGTCGGGGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | TCACTTCGAGCTTATCGTTGGTGGCGCGTGCCTTTAGTCCCAGCACTTAGGAGGCATCGTCATCCACTATaGTCCCGTCCTCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYRWWRVPLVPALRRHRHPL*SRPQPG Trigger: TCCTGGCTGAGGACGGGACCATAGTGGATGACGATG...CCTCCTAAGTGCTGGGACTAAAGGCACGCGCCACCAACGATAAGCTCGAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR CCA 90 bp | TCACTTCGAGCTTATCGTTGGTGGCGCGTGCCTTTAGTCCCAGCACTTAGGAGGGCCTCAAAGGACTCTTaGGAAACCCAAGCCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYRWWRVPLVPALRRASKDS*ETQAVP Trigger: AGGGACGGCTTGGGTTTCCCAAGAGTCCTTTGAGGC...CCTCCTAAGTGCTGGGACTAAAGGCACGCGCCACCAACGATAAGCTCGAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CCA 90 bp | CGGCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATAGTGCTCTGCAGCCCCTaGACAGTGGCACAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPVEVKESHIHASAPPNIVLCSP*TVAQLW Trigger: CCAAAGCTGTGCCACTGTCCAGGGGCTGCAGAGCAC...TATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR CCA 90 bp | CGGCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATATGGTCAAGCACCTGCTaGAGTGTGCTCTGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPVEVKESHIHASAPPNIWSSTC*SVLCSP Trigger: GGGGCTGCAGAGCACACTCCAGCAGGTGCTTGACCA...TATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR TCA 90 bp | AAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATACGTCCATGGAAGGCCAGCCAGGACCAGGGTaGTCGGCGTCAGGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGKPHTCLCTSKHTSMEGQPGPG*SASGTY Trigger: ATAAGTCCCTGACGCCGATCACCCTGGTCCTGGCTG...GCCTTCCATGGACGTATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR TCA 90 bp | CGGCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATACTTTGGCAGAGTTCCTaGGCCAGCTCTGCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPVEVKESHIHASAPPNILWQSS*ASSAHG Trigger: CCCATGTGCAGAGCTGGCTCAGGAACTCTGCCAAAG...TATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR CCA 90 bp | ACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCAGACAGCGTGCTCTGCAGCCCCTaGACAGTGGCACAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSRNSGEKLEVLWSADSVLCSP*TVAQLW Trigger: CCAAAGCTGTGCCACTGTCCAGGGGCTGCAGAGCAC...GCTGTCTGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR TCA 90 bp | GGTCTACAGAGAAAGTTCCAGGATAGCCAGGACTACCTCCCCGCTCAGAAAAGCTTGGAGGTCCTCTTCTaGCAGCAGGATGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLQRKFQDSQDYLPAQKSLEVLF*QQDDAG Trigger: TCCAGCATCATCCTGCTGTCAGAAGAGGACCTCCAA...GCTTTTCTGAGCGGGGAGGTAGTCCTGGCTATCCTGGAACTTTCTCTGTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR GCA 90 bp | TGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCAGATCGCGGCTGTGGTTaGGGCGTAGCAGACACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRTLSRNSGEKLEVLWSADRGCG*GVADTV Trigger: AACCGTGTCTGCTACGCCGCAACCACAGCCGCGATC...TGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR GCA 90 bp | TGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCATCCGTGGTGCAGGCCTaGTGGACTGTCTCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CRTLSRNSGEKLEVLWSASVVQA*WTVSAF Trigger: GAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGA...TGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR GCA 90 bp | AGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTGCAAGCTCTGCACTTaGTGCAGCCGCAGGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSCRTLSRNSGEKLEVLWCKLCT*CSRRAS Trigger: GCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCA...CCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR CCA 90 bp | GCTGGAGAGATGGCTCAGTGGTTAGGAGCACTGGCCAGGCTTCCAGAACAGCCACCACAAACTTCGTATTaGAAGGAAGGCAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAQWLGALARLPEQPPQTSY*KEGRGS Trigger: ACTTCCTCTGCCTTCCTTCCAATACGAAGTTTGTGG...TGGCTGTTCTGGAAGCCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGCAGCCAGGACCAGGGTaGTCGGCGTCAGGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLQNSEQKQRRKTRSALQPGPG*SASGTY Trigger: ATAAGTCCCTGACGCCGATCACCCTGGTCCTGGCTG...CAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR TCA 90 bp | AAGCACATTCCGGGAGCTGGAGAGATGGCTCAGTGGTTAGGAGCACTGGCCAGGACAGACTCCAAATCCTaGCTAGATAAACTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHIPGAGEMAQWLGALARTDSKS*LDKLSS Trigger: AGAGCTGAGTTTATCTAGTCAGGATTTGGAGTCTGT...CCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGCTCCCGGAATGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR CCA 90 bp | ACAAAACGGAAATCCCAGTACAGTAAAGGAGGTAGAGAGGCACATGCACAGCCCGCCTCAAAGGACTCTTaGGAAACCCAAGCCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRKSQYSKGGREAHAQPASKDS*ETQAVP Trigger: AGGGACGGCTTGGGTTTCCCAAGAGTCCTTTGAGGC...GGGCTGTGCATGTGCCTCTCTACCTCCTTTACTGTACTGGGATTTCCGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR TCA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCGCTGCCACGCCGTGCTaGTCGCGGCTGTGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTAATPC*SRLWLR Trigger: CCGCAACCACAGCCGCGATCAGCACGGCGTGGCAGC...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
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| CDS-3UTR TCA 90 bp | GTAGGAGGAGGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCCTTCTGACAGCAGGATaGTGCTGGACAGATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRSIMLICSVHPTFTLLTAG*CWTDLL Trigger: AAGAAGATCTGTCCAGCATCATCCTGCTGTCAGAAG...GGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCCTCCTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCAGACAGCCTGCTGGACTGTCTCTaGCTTCCTTATGTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSRNSGEKLEVLWSADSLLDCL*LPYVPA Trigger: AGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAG...GCTGTCTGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS-3UTR CCA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCCGACAGCCAGGGCTTTaGGATCCTCCTTGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCRQPGL*DPPWRQ Trigger: CTGTCTCCAAGGAGGATCCCAAAGCCCTGGCTGTCG...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| 3UTR CAA 72 bp | CCTCAGAGCACTTGTGGATCTTTGACTCTTTATCCCTaGAAGCCACCGCAGAAGCTTCAGCCCACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQSTCGSLTLYP*KPPQKLQPTVL Trigger: GAGAACTGTGGGCTGAAGCTTCTGCGGTGGCTTCAAGGGATAAAGAGTCAAAGATCCACAAGTGCTCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR TCA 90 bp | CAGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGCACATGGGATGTCGATaGGCGCTTGGAGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLQNSEQKQRRKTRSALHMGCR*ALGGPL Trigger: AAGAGGACCTCCAAGCGCTCATCGACATCCCATGTG...CAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTTGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGAGTGAATGCAAGCTCTaGACTTGCTGCAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLQNSEQKQRRKTRSALSECKL*TCCSRR Trigger: CCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACT...CAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCAACTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCCATCGTCATCCACTATaGTCCCGTCCTCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCHRHPL*SRPQPG Trigger: TCCTGGCTGAGGACGGGACCATAGTGGATGACGATG...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR TCA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCTTGGAGGTCCTCTTCTaGCAGCAGGATGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCLEVLF*QQDDAG Trigger: TCCAGCATCATCCTGCTGTCAGAAGAGGACCTCCAA...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCCTCGAGACTGGAGGCTaGCACGCCGTGCTGATCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTLETGG*HAVLIA Trigger: CGCGATCAGCACGGCGTGGCAGCCTCCAGTCTCGAG...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAAAACAAAACGGAAATCCCAGTACAGTAAAGGAGGTAGAGAGGCACATCTCTGGTCAAGCACCTaGTGGAGTGTGCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKTKRKSQYSKGGREAHLWSST*WSVLCS Trigger: GCTGCAGAGCACACTCCAGCAGGTGCTTGACCAGAG...ATGTGCCTCTCTACCTCCTTTACTGTACTGGGATTTCCGTTTTGTTTTCTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTGAAAGCAGACAGCACTAGAGATTGCAGAAGTTGCAGAACTCTGAGCAGAGGTTGGACAAGATGTTaGCCTCTTTCTCCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKADSTRDCRSCRTLSRGWTRC*PLSPRP Trigger: AGGCCTTGGAGAAAGAGGGCAACATCTTGTCCAACC...TCTGCTCAGAGTTCTGCAACTTCTGCAATCTCTAGTGCTGTCTGCTTTCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR GCA 90 bp | TATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCCAGCATCAGGAGGTACTACTCTGGTCAAGCACCTaGTGGAGTGTGCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YAQVNIIPFPSTQHQEVLLWSST*WSVLCS Trigger: GCTGCAGAGCACACTCCAGCAGGTGCTTGACCAGAG...TAGTACCTCCTGATGCTGGGTAGAAGGGAAGGGAATTATATTAACTTGAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| 3UTR CAA 72 bp | GCATTTATTAGCTTGAGAAGTTCATGGCCACAATTGTaGCTGCTGGGCGCCTTTTCTCTACCCTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFISLRSSWPQL*LLGAFSLPLCV Trigger: GACACACAAGGGTAGAGAAAAGGCGCCCAGCAGCAACAATTGTGGCCATGAACTTCTCAAGCTAATAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCTGGACTCTTTCTGGTTaGACAAGATGTTGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCWTLSG*TRCCPL Trigger: AAGAGGGCAACATCTTGTCCAACCAGAAAGAGTCCA...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR TCA 90 bp | TATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCCAGCATCAGGAGGTACTACCCACCTCCAAATCCTaGCTAGATAAACTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YAQVNIIPFPSTQHQEVLPTSKS*LDKLSS Trigger: AGAGCTGAGTTTATCTAGTCAGGATTTGGAGGTGGG...TAGTACCTCCTGATGCTGGGTAGAAGGGAAGGGAATTATATTAACTTGAGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR GCA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCGGTTGGACAAGATGTTaGCCTCTTTCTCCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTGWTRC*PLSPRP Trigger: AGGCCTTGGAGAAAGAGGGCAACATCTTGTCCAACC...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CCA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCTGGACTCTTTCTGGTTaGACAAGATGTTGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTWTLSG*TRCCPL Trigger: AAGAGGGCAACATCTTGTCCAACCAGAAAGAGTCCA...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS TCA 90 bp | CGCCGTGCTGATCGCGGCTGTGGTTGCGGCGTAGCAGACACGGTTTaGGAGGCCGGACATCGTCCGGGTCTGGGGCGCTGGCTCCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRADRGCGCGVADTV*EAGHRPGLGRWLPA Trigger: CGCGGGGAGCCAGCGCCCCAGACCCGGACGATGTCCGGCCTCTCAAACCGTGTCTGCTACGCCGCAACCACAGCCGCGATCAGCACGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS GCA 90 bp | CAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTGCTGGACTGTCTCTaGCTTCCTTATGTCCCAGCTCAGAGCGACAGCCAGGGCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPQGELRGAGLLDCL*LPYVPAQSDSQGFG Trigger: CCCAAAGCCCTGGCTGTCGCTCTGAGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS TCA 90 bp | GCTTTGCTCCTCAGCTCCTCGAGACTGGAGGCTGCCACGCCGTGCTaGTCGCGGCTGTGGTTGCGGCGTAGCAGACACGGTTTGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLSSSRLEAATPC*SRLWLRRSRHGLRG Trigger: GCCTCTCAAACCGTGTCTGCTACGCCGCAACCACAGCCGCGATCAGCACGGCGTGGCAGCCTCCAGTCTCGAGGAGCTGAGGAGCAAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS CCA 90 bp | TGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTGCTaGACTGTCTCTGCCTTCCTTATGTCCCAGCTCAGAGCGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTCCSRRASSVVQAC*TVSAFLMSQLRATA Trigger: GGCTGTCGCTCTGAGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | CTCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTaGTGGACTGTCTCTGCCTTCCTTATGTCCCAGCTCAGAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LCTCCSRRASSVVQA*WTVSAFLMSQLRAT Trigger: TGTCGCTCTGAGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS CCA 90 bp | GTGAATGCAAGCTCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTaGTGCAGGCCTGCTGGACTGTCTCTGCCTTCCTTATGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VNASSALAAAAGRAP*CRPAGLSLPSLCPS Trigger: GCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | AATGCAAGCTCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTaGAGGCCTGCTGGACTGTCTCTGCCTTCCTTATGTCCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NASSALAAAAGRAPW*RPAGLSLPSLCPSS Trigger: TGAGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | AGTGGGCTCCTCCTTGCTGATAGATTCCTGAGTGAATGCAAGCTCTaGACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGLLLADRFLSECKL*TCCSRRASSVVQAC Trigger: GCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAGGAGCCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | TCCCCAGGCAGTGGGCTCCTCCTTGCTGATAGATTCCTGAGTGAATaGAAGCTCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGSGLLLADRFLSE*KLCTCCSRRASSVV Trigger: CACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAGGAGCCCACTGCCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS TCA 90 bp | GCTGTGGTTCCCCAGGCAGTGGGCTCCTCCTTGCTGATAGATTCCTaGGTGAATGCAAGCTCTGCACTTGCTGCAGCCGCAGGGCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVVPQAVGSSLLIDS*VNASSALAAAAGRA Trigger: AGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAGGAGCCCACTGCCTGGGGAACCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | CTCCTTGCTGATAGATTCCTGAGTGAATGCAAGCTCTGCACTTGCTaGAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTGCTGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLADRFLSECKLCTC*SRRASSVVQACWTV Trigger: GACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 90 bp | CTCCTCCTTGCTGATAGATTCCTGAGTGAATGCAAGCTCTGCACTTaGTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTGCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LLLADRFLSECKLCT*CSRRASSVVQACWT Trigger: AGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCCTGCCGACAGATCTGCCTCCCGCTGTAGGAGGAGGCAGGTCAATCATGCGACAGCCAGGGCTTaGGGATCCTCCTTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: KLPADRSASRCRRRQVNHATARA*GSSLET Trigger: TGTCTCCAAGGAGGATCCCAAAGCCCTGGCTGTCGC...ATGATTGACCTGCCTCCTCCTACAGCGGGAGGCAGATCTGTCGGCAGGCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS CCA 90 bp | AAACTCAGCTCTGGGGCAGGCTTCTCCTTCAGTGTGGTAAGGATCTaGCTTCTGAGCAGCACTTCCGAAGCCATCTCTCTGCCGACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLSSGAGFSFSVVRI*LLSSTSEAISLPTP Trigger: AGGCGTCGGCAGAGAGATGGCTTCGGAAGTGCTGCTCAGAAGCCAGATCCTTACCACACTGAAGGAGAAGCCTGCCCCAGAGCTGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAACAGCCAGAGTCAATTCCCAGCACCCACATGGCTGCTGAGAGCTGTGACAGTGGCACAGCTTaGGCAGAGTTCCTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPEQPESIPSTHMAAESCDSGTA*AEFLSQ Trigger: CTGGCTCAGGAACTCTGCCAAAGCTGTGCCACTGTC...ACAGCTCTCAGCAGCCATGTGGGTGCTGGGAATTGACTCTGGCTGTTCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | AACAGCCAGAGTCAATTCCCAGCACCCACATGGCTGCTGAGAGCTGTCTGTAACAGTTCCAGGAGCTGCTaGGACTGGCGGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSQSQFPAPTWLLRAVCNSSRSC*DWRASS Trigger: AGAGGAAGCCCGCCAGTCCAAGCAGCTCCTGGAACT...GTTACAGACAGCTCTCAGCAGCCATGTGGGTGCTGGGAATTGACTCTGGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | AAGCACATTCCGGGAGCTGGAGAGATGGCTCAGTGGTTAGGAGCACTGGCCAGGGCTTTGGGATCCTCCTaGGAGACAGACTCCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: KHIPGAGEMAQWLGALARALGSS*ETDSKS Trigger: GGATTTGGAGTCTGTCTCCAAGGAGGATCCCAAAGC...CCTGGCCAGTGCTCCTAACCACTGAGCCATCTCTCCAGCTCCCGGAATGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS TCA 90 bp | CAGCTCTGCACATGGGATGTCGATGAGCGCTTGGAGGTCCTCTTCTaGCAGCAGGATGATGCTGGACAGATCTTCTTTCAGCTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLCTWDVDERLEVLF*QQDDAGQIFFQLPG Trigger: GCCAGGCAGCTGAAAGAAGATCTGTCCAGCATCATCCTGCTGTCAGAAGAGGACCTCCAAGCGCTCATCGACATCCCATGTGCAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS GCA 90 bp | GAGCAGCACTTCCGAAGCCATCTCTCTGCCGACGCCTGTGTCAACTaGATCCAGCTCTTCACTGAGGGCAGCTTTGGACTCTTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EQHFRSHLSADACVN*IQLFTEGSFGLFLV Trigger: AACCAGAAAGAGTCCAAAGCTGCCCTCAGTGAAGAGCTGGATGCAGTTGACACAGGCGTCGGCAGAGAGATGGCTTCGGAAGTGCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | AGCCACATACATGCCTCTGCACCTCCAAACATACGTCCATGGAAGGCATTCTCTAGTTCCAGGAGCTGCTaGGACTGGCGGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHIHASAPPNIRPWKAFSSSRSC*DWRASS Trigger: AGAGGAAGCCCGCCAGTCCAAGCAGCTCCTGGAACT...AGAGAATGCCTTCCATGGACGTATGTTTGGAGGTGCAGAGGCATGTATGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS TCA 90 bp | ACAGCCAGGGCTTTGGGATCCTCCTTGGAGACAGACTCCAAATCCTaGCTAGATAAACTCAGCTCTGGGGCAGGCTTCTCCTTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TARALGSSLETDSKS*LDKLSSGAGFSFSV Trigger: CACACTGAAGGAGAAGCCTGCCCCAGAGCTGAGTTTATCTAGTCAGGATTTGGAGTCTGTCTCCAAGGAGGATCCCAAAGCCCTGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | GGGGACCTGACACTGTCTTCTGGCCTTCATGGACATGAGGTACACAGATATACAAGGAGTTCACAGGCTTaGCTCCTCAGCTCCTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GDLTLSSGLHGHEVHRYTRSSQA*LLSSSR Trigger: TCTCGAGGAGCTGAGGAGCAAAGCCTGTGAACTCCT...TGTATATCTGTGTACCTCATGTCCATGAAGGCCAGAAGACAGTGTCAGGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | ACGCACGCACACACAAGAAGTGGGCTGGAGACTCTTGATAGCAGTCTTCTCCCAGCCACAAACTTCGTATaGGAAGGAAGGCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: THAHTRSGLETLDSSLLPATNFV*EGRQRK Trigger: CTTCCTCTGCCTTCCTTCCAATACGAAGTTTGTGGC...TGGGAGAAGACTGCTATCAAGAGTCTCCAGCCCACTTCTTGTGTGTGCGTGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGCAAACTGGCAGCTGAGCCGGCCTGTGGAGGTAAAGGAAAGCCACATAGCCACAAACTTCGTATaGGAAGGAAGGCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKANWQLSRPVEVKESHIATNFV*EGRQRK Trigger: CTTCCTCTGCCTTCCTTCCAATACGAAGTTTGTGGC...TATGTGGCTTTCCTTTACCTCCACAGGCCGGCTCAGCTGCCAGTTTGCCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | CGGCCTGTGGAGGTAAAGGAAAGCCACATACATGCCTCTGCACCTCCAAACATATCACTGAGGGCAGCTTaGGACTCTTTCTGGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPVEVKESHIHASAPPNISLRAA*DSFWLD Trigger: GTCCAACCAGAAAGAGTCCAAAGCTGCCCTCAGTGA...TATGTTTGGAGGTGCAGAGGCATGTATGTGGCTTTCCTTTACCTCCACAGGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | TGCAGAACTCTGAGCAGAAACAGCGGAGAAAAACTAGAAGTGCTCTGGTCTGCATCTCGTTTGGCTCGTTaGGGTCGCTGTGGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRTLSRNSGEKLEVLWSASRLAR*GRCGSP Trigger: TGGGGAACCACAGCGACCCAAACGAGCCAAACGAGA...TGCAGACCAGAGCACTTCTAGTTTTTCTCCGCTGTTTCTGCTCAGAGTTCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | GTAGGAGGAGGCAGGTCAATCATGTTAATCTGCTCTGTGCACCCCACCTTCACCTTGGACTCTTTCTGGTaGGACAAGATGTTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRSIMLICSVHPTFTLDSFW*DKMLPS Trigger: AGAGGGCAACATCTTGTCCAACCAGAAAGAGTCCAA...GGTGAAGGTGGGGTGCACAGAGCAGATTAACATGATTGACCTGCCTCCTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS-3UTR CAA 90 bp | GGTCTACAGAGAAAGTTCCAGGATAGCCAGGACTACCTCCCCGCTCAGAAAAGCTTGGACTCTTTCTGGTaGGACAAGATGTTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLQRKFQDSQDYLPAQKSLDSFW*DKMLPS Trigger: AGAGGGCAACATCTTGTCCAACCAGAAAGAGTCCAA...GCTTTTCTGAGCGGGGAGGTAGTCCTGGCTATCCTGGAACTTTCTCTGTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | TTTTCACTGCCCTTGACCAGAACTTTCACTTGGAACCTAAGGCCTAACACATGCTCACTGAGGGCAGCTTaGGACTCTTTCTGGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSLPLTRTFTWNLRPNTCSLRAA*DSFWLD Trigger: GTCCAACCAGAAAGAGTCCAAAGCTGCCCTCAGTGA...GCATGTGTTAGGCCTTAGGTTCCAAGTGAAAGTTCTGGTCAAGGGCAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS CCA 90 bp | TATAAATCCACTTCTCATTGCAGGCCAACGCCACAAACTTCGTATTaGAAGGAAGGCAGAGGAAGTAGTCATCGTCATCCACTATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YKSTSHCRPTPQTSY*KEGRGSSHRHPLWS Trigger: GGACCATAGTGGATGACGATGACTACTTCCTCTGCCTTCCTTCCAATACGAAGTTTGTGGCGTTGGCCTGCAATGAGAAGTGGATTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS-3UTR CAA 90 bp | CACAACAGGAAATTGAACTATGCTCAAGTTAATATAATTCCCTTCCCTTCTACCAGGAGTTCACAGGCTTaGCTCCTCAGCTCCTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HNRKLNYAQVNIIPFPSTRSSQA*LLSSSR Trigger: TCTCGAGGAGCTGAGGAGCAAAGCCTGTGAACTCCT...GGTAGAAGGGAAGGGAATTATATTAACTTGAGCATAGTTCAATTTCCTGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103216.10 |
||
| CDS TCA 72 bp | GATCGCGGCTGTGGTTGCGGCGTAGCAGACACGGTTTaGGAGGCCGGACATCGTCCGGGTCTGGGGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DRGCGCGVADTV*EAGHRPGLGRW Trigger: CCAGCGCCCCAGACCCGGACGATGTCCGGCCTCTCAAACCGTGTCTGCTACGCCGCAACCACAGCCGCGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS GCA 72 bp | ACAGGCTTTGCTCCTCAGCTCCTCGAGACTGGAGGCTaGCACGCCGTGCTGATCGCGGCTGTGGTTGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TGFAPQLLETGG*HAVLIAAVVAA Trigger: CGCCGCAACCACAGCCGCGATCAGCACGGCGTGGCAGCCTCCAGTCTCGAGGAGCTGAGGAGCAAAGCCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS GCA 72 bp | TGCTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCCTaGTGGACTGTCTCTGCCTTCCTTATGTCCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCSRRASSVVQA*WTVSAFLMSQL Trigger: GAGCTGGGACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS CCA 72 bp | GGAGTTCACAGGCTTTGCTCCTCAGCTCCTCGAGACTaGAGGCTGCCACGCCGTGCTGATCGCGGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GVHRLCSSAPRD*RLPRRADRGCG Trigger: ACCACAGCCGCGATCAGCACGGCGTGGCAGCCTCCAGTCTCGAGGAGCTGAGGAGCAAAGCCTGTGAACTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS CCA 72 bp | AGCTCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTaGTGCAGGCCTGCTGGACTGTCTCTGCCTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSALAAAAGRAP*CRPAGLSLPSL Trigger: TAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 72 bp | TCTGCACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTaGAGGCCTGCTGGACTGTCTCTGCCTTCCTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: SALAAAAGRAPW*RPAGLSLPSLC Trigger: ACATAAGGAAGGCAGAGACAGTCCAGCAGGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 72 bp | GCTGATAGATTCCTGAGTGAATGCAAGCTCTGCACTTaGTGCAGCCGCAGGGCGAGCTCCGTGGTGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ADRFLSECKLCT*CSRRASSVVQA Trigger: GGCCTGCACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 72 bp | CTCCTTGCTGATAGATTCCTGAGTGAATGCAAGCTCTaGACTTGCTGCAGCCGCAGGGCGAGCTCCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLADRFLSECKL*TCCSRRASSVV Trigger: CACCACGGAGCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 72 bp | AGTGGGCTCCTCCTTGCTGATAGATTCCTGAGTGAATaGAAGCTCTGCACTTGCTGCAGCCGCAGGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGLLLADRFLSE*KLCTCCSRRAS Trigger: GCTCGCCCTGCGGCTGCAGCAAGTGCAGAGCTTGCATTCACTCAGGAATCTATCAGCAAGGAGGAGCCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
||
| CDS GCA 72 bp | TTCCGAAGCCATCTCTCTGCCGACGCCTGTGTCAACTaGATCCAGCTCTTCACTGAGGGCAGCTTTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: FRSHLSADACVN*IQLFTEGSFGL Trigger: GAGTCCAAAGCTGCCCTCAGTGAAGAGCTGGATGCAGTTGACACAGGCGTCGGCAGAGAGATGGCTTCGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS CCA 72 bp | TCTGGGGCAGGCTTCTCCTTCAGTGTGGTAAGGATCTaGCTTCTGAGCAGCACTTCCGAAGCCATCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGAGFSFSVVRI*LLSSTSEAISL Trigger: CAGAGAGATGGCTTCGGAAGTGCTGCTCAGAAGCCAGATCCTTACCACACTGAAGGAGAAGCCTGCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
||
| CDS TCA 72 bp | GCTTTGGGATCCTCCTTGGAGACAGACTCCAAATCCTaGCTAGATAAACTCAGCTCTGGGGCAGGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ALGSSLETDSKS*LDKLSSGAGFS Trigger: GGAGAAGCCTGCCCCAGAGCTGAGTTTATCTAGTCAGGATTTGGAGTCTGTCTCCAAGGAGGATCCCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030816.4 |
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| CDS TCA 72 bp | ACATGGGATGTCGATGAGCGCTTGGAGGTCCTCTTCTaGCAGCAGGATGATGCTGGACAGATCTTCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TWDVDERLEVLF*QQDDAGQIFFQ Trigger: CTGAAAGAAGATCTGTCCAGCATCATCCTGCTGTCAGAAGAGGACCTCCAAGCGCTCATCGACATCCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
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| CDS CCA 72 bp | ACTTCTCATTGCAGGCCAACGCCACAAACTTCGTATTaGAAGGAAGGCAGAGGAAGTAGTCATCGTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: TSHCRPTPQTSY*KEGRGSSHRHP Trigger: TGGATGACGATGACTACTTCCTCTGCCTTCCTTCCAATACGAAGTTTGTGGCGTTGGCCTGCAATGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
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| CDS GCA 72 bp | TCCCTCCATCGGAATCATTATAAATCCACTTCTCATTaGAGGCCAACGCCACAAACTTCGTATTGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLHRNHYKSTSH*RPTPQTSYWKE Trigger: TTCCTTCCAATACGAAGTTTGTGGCGTTGGCCTGCAATGAGAAGTGGATTTATAATGATTCCGATGGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030816.4 ENSMUST00000103216.10 |
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