Pregenerated sensors for DEUP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039977Ensembl transcript IDs: ENSMUST00000045513.13, ENSMUST00000115592.8, ENSMUST00000115593.10, ENSMUST00000152377.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTTTGTGCCCAGCACAGACTGGCTGCACTCAGCTTCCTCACATTaGGAGGTGAGCACTTCCCTCTCTTGCTGCCTGATACGCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: GFVPSTDWLHSASSH*EVSTSLSCCLIRRQ Trigger: TTGCCTGCGTATCAGGCAGCAAGAGAGGGAAGTGCTCACCTCCCAATGTGAGGAAGCTGAGTGCAGCCAGTCTGTGCTGGGCACAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 90 bp | GCTGTGCATCTGCTGTGTCTCAGTGGCAGCATGACTCTGGCACAGTaGCGGTTACTGTGCACACTGCACAAAGTCCTTGGTGTTAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: AVHLLCLSGSMTLAQ*RLLCTLHKVLGVKE Trigger: TTCCTTAACACCAAGGACTTTGTGCAGTGTGCACAGTAACCGTCACTGTGCCAGAGTCATGCTGCCACTGAGACACAGCAGATGCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 90 bp | TCTCTCATTGAACCTGGAGCTAGGTTGGCAGCCAGCAAGCCCCAGTaGTTTTCCTGTCTCTGCACACATAGCATGAGGCTTACAGGTATG | + |
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Preference number: 1 (lower is better) Translates to: SLIEPGARLAASKPQ*FSCLCTHSMRLTGM Trigger: CATACCTGTAAGCCTCATGCTATGTGTGCAGAGACAGGAAAATCACTGGGGCTTGCTGGCTGCCAACCTAGCTCCAGGTTCAATGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 90 bp | GGTATGTATCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTaGACTCAGGTCTTCGTGATTGAGCAGCAAGCCCTCTTTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GMYRHVLSLHMVAWT*TQVFVIEQQALFLS Trigger: ACTGAGAAAGAGGGCTTGCTGCTCAATCACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCGATACATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 90 bp | CAGCCAGCAAGCCCCAGTGATTTTCCTGTCTCTGCACACATAGCATaGGGCTTACAGGTATGTATCGCCATGTTCTGTCTCTTCACATGG | + |
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Preference number: 1 (lower is better) Translates to: QPASPSDFPVSAHIA*GLQVCIAMFCLFTW Trigger: CCATGTGAAGAGACAGAACATGGCGATACATACCTGTAAGCCTCATGCTATGTGTGCAGAGACAGGAAAATCACTGGGGCTTGCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR GCA 90 bp | GTGGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTaGCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAA | + |
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Preference number: 1 (lower is better) Translates to: VGASRGQRVISGVLL*HSSHSFPEKGSLIE Trigger: TTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR GCA 90 bp | ACTGGTTTTCAAGTGTATGCATATGAAGACGTGTTTACCTGTGGGTaGAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: TGFQVYAYEDVFTCG*KQRPEGDFRCSALP Trigger: TGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACACTTGAAAACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATaGATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCVGHT*ILYSKCLLSLCVFR Trigger: CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 90 bp | TCTTGCTATTACTTCTGTAGAAACTGGACACTCTTGCAAAGCAATTaGGTTTTGCATTCCTTTATTGTATCACAAACAGTGGTGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: SCYYFCRNWTLLQSN*VLHSFIVSQTVVKQ Trigger: CTGTTTCACCACTGTTTGTGATACAATAAAGGAATGCAAAACTCAATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTAATAGCAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCAGGAAAGAAGCCCTTTaGGGCTATGCATGTTTATGC | + |
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Preference number: 2 (lower is better) Translates to: CGCKQRPEGDFRCSALPFRKEAL*GYACLC Trigger: GCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCT...GAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCCAGACGGAGGCAGCATaGAGCTGTGCATCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HLPAYRKCHYSESQESEIQTEAA*SCASAV Trigger: CACAGCAGATGCACAGCTTCATGCTGCCTCCGTCTG...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | TCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTGAACTCAGGTCTTCGTCACTTTAGAAGTCCTTaGGTTTTGTGCCCAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SPCSVSSHGCLDLNSGLRHFRSP*VLCPAQ Trigger: CTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTG...ACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCAGTCCTTGGGTTTTGTaGCCAGCACAGACTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HLPAYRKCHYSESQESEISPWVL*PAQTGC Trigger: GCAGCCAGTCTGTGCTGGGCACAAAACCCAAGGACT...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGAGGAAAGAAGCCCTTTaGGGCTATGCATGTTTATGC | + |
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Preference number: 2 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQRKEAL*GYACLC Trigger: GCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCT...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCATCAGCTTCCTCACATTaGGAGGTGAGCACTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVLGIHAYYIASASSH*EVSTSL Trigger: GAGGGAAGTGCTCACCTCCCAATGTGAGGAAGCTGA...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCTCAGCTTCCTCACATTaGGAGGTGAGCACTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HLPAYRKCHYSESQESEISASSH*EVSTSL Trigger: GAGGGAAGTGCTCACCTCCCAATGTGAGGAAGCTGA...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTCCAGCACAGACTGGCTaGACTCAGCTTCCTCACATT | + |
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Preference number: 2 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCPAQTG*TQLPHI Trigger: AATGTGAGGAAGCTGAGTGCAGCCAGTCTGTGCTGG...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTATGAAGCTGTGCATCTaGTGTGTCTCAGTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ILHIPFLRKGLSLNLELGMKLCI*CVSVAA Trigger: TGCTGCCACTGAGACACAGCAGATGCACAGCTTCAT...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | CATCATCTTGCTATTACTTCTGTAGAAACTGGACACTCTTGCAAAGCAATTGAGAGTCCTTGGGTTTTGTaGCCAGCACAGACTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HHLAITSVETGHSCKAIESPWVL*PAQTGC Trigger: GCAGCCAGTCTGTGCTGGGCACAAAACCCAAGGACT...CTCAATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTAATAGCAAGATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGATGAAGCTGTGCATCTaGTGTGTCTCAGTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GHTCILYSKCLLSLCVFRMKLCI*CVSVAA Trigger: TGCTGCCACTGAGACACAGCAGATGCACAGCTTCAT...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCGGTTACTGTGCACACTaGACAAAGTCCTTGGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: HLPAYRKCHYSESQESEIGYCAH*TKSLVL Trigger: TAACACCAAGGACTTTGTGCAGTGTGCACAGTAACC...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGGAAGTGATTTACTTGTaGAAACTAAGCCAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CMHMKTCLPVGASRGQRVEVIYL*KLSQIS Trigger: AGAAATCTGGCTTAGTTTCCACAAGTAAATCACTTC...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGCACTTTAGAAGTCCTTaGGTTTTGTGCCCAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: VSCLCVYSGYWLIILVYLHFRSP*VLCPAQ Trigger: CTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTG...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTGAAACTGGACACTCTTaGAAAGCAATTGAGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ILHIPFLRKGLSLNLELGETGHS*KAIEFC Trigger: GCAAAACTCAATTGCTTTGCAAGAGTGTCCAGTTTC...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGAGAACAATTAGTATGTaGACTGCAGAAACAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: SAILHIPFLRKGLSLNLERTISM*TAETES Trigger: TGATTCTGTTTCTGCAGTCCACATACTAATTGTTCT...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCAGAACAATTAGTATGTaGACTGCAGAAACAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: PFLRQERSPLGLCMFMLSRTISM*TAETES Trigger: TGATTCTGTTTCTGCAGTCCACATACTAATTGTTCT...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCATACTTCTGTAGAAACTaGACACTCTTGCAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVLGIHAYYIAYFCRN*TLLQSN Trigger: ATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTA...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCAGGCTATGCATGTTTATaGTATCCTAACAGAACAATT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVLGIHAYYIAGYACL*YPNRTI Trigger: AATTGTTCTGTTAGGATAGCATAAACATGCATAGCC...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTGAAGTGATTTACTTGTaGAAACTAAGCCAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: ILHIPFLRKGLSLNLELGEVIYL*KLSQIS Trigger: AGAAATCTGGCTTAGTTTCCACAAGTAAATCACTTC...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR GCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGGGCTATGCATGTTTATaGTATCCTAACAGAACAATT | + |
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Preference number: 2 (lower is better) Translates to: CKSSKDIPFASETNLRCLGYACL*YPNRTI Trigger: AATTGTTCTGTTAGGATAGCATAAACATGCATAGCC...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGGAAGTGATTTACTTGTaGAAACTAAGCCAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CKSSKDIPFASETNLRCLEVIYL*KLSQIS Trigger: AGAAATCTGGCTTAGTTTCCACAAGTAAATCACTTC...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CAA 90 bp | GGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCTTCGAACCTGGAGCTAGGTaGGCAGCCAGCAAGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GCKQRPEGDFRCSALPFFEPGAR*AASKPQ Trigger: CTGGGGCTTGCTGGCTGCCAACCTAGCTCCAGGTTC...GAAGAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR CCA 72 bp | CCCAGCACAGACTGGCTGCACTCAGCTTCCTCACATTaGGAGGTGAGCACTTCCCTCTCTTGCTGCCTGATA | + |
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Preference number: 3 (lower is better) Translates to: PSTDWLHSASSH*EVSTSLSCCLI Trigger: TATCAGGCAGCAAGAGAGGGAAGTGCTCACCTCCCAATGTGAGGAAGCTGAGTGCAGCCAGTCTGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 72 bp | CTGCTGTGTCTCAGTGGCAGCATGACTCTGGCACAGTaGCGGTTACTGTGCACACTGCACAAAGTCCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LLCLSGSMTLAQ*RLLCTLHKVLG Trigger: ACCAAGGACTTTGTGCAGTGTGCACAGTAACCGTCACTGTGCCAGAGTCATGCTGCCACTGAGACACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 72 bp | CGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTaGACTCAGGTCTTCGTGATTGAGCAGCAAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RHVLSLHMVAWT*TQVFVIEQQAL Trigger: GAGGGCTTGCTGCTCAATCACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 72 bp | GAACCTGGAGCTAGGTTGGCAGCCAGCAAGCCCCAGTaGTTTTCCTGTCTCTGCACACATAGCATGAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: EPGARLAASKPQ*FSCLCTHSMRL Trigger: AAGCCTCATGCTATGTGTGCAGAGACAGGAAAATCACTGGGGCTTGCTGGCTGCCAACCTAGCTCCAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR GCA 72 bp | GCTTCCTCACATTGGGAGGTGAGCACTTCCCTCTCTTaGTGCCTGATACGCAGGCAATGGGACCTTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: ASSHWEVSTSLS*CLIRRQWDLSI Trigger: TATGCTAAGGTCCCATTGCCTGCGTATCAGGCAGCAAGAGAGGGAAGTGCTCACCTCCCAATGTGAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCAGAAAGGGTCTCTCATaGAACCTGGAGCTAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: CGCKQRPEGDFRCSALPFRKGLS*NLELGW Trigger: CCAACCTAGCTCCAGGTTCAATGAGAGACCCTTTCT...GAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 72 bp | TTCACATGGTTGCCTGGACCTGAACTCAGGTCTTCGTaGTTGAGCAGCAAGCCCTCTTTCTCAGTGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: FTWLPGPELRSS*LSSKPSFSVRH Trigger: GTGCCTCACTGAGAAAGAGGGCTTGCTGCTCAATCACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR CCA 72 bp | CTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTTaGCAGCCAGCAAGCCCCAGTGATTTTCCTGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LRKGLSLNLELG*QPASPSDFPVS Trigger: AGAGACAGGAAAATCACTGGGGCTTGCTGGCTGCCAACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGCTTACAGGTATGTATCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGCTCAGCTTCCTCACATaGGGAGGTGAGCACTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: MRLTGMYRHVLSLHMVAWLSFLT*GGEHFP Trigger: AGGGAAGTGCTCACCTCCCAATGTGAGGAAGCTGAG...CCAGGCAACCATGTGAAGAGACAGAACATGGCGATACATACCTGTAAGCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR TCA 72 bp | CGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTaGTTTCAGGTGTTCTGCTCTGCCATTCTTCACATT | + |
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Preference number: 3 (lower is better) Translates to: RVYLWVQAEARG*FQVFCSAILHI Trigger: AATGTGAAGAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR GCA 72 bp | AGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTaGCATTCTTCACATTCCTTTCCTGAGAAAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SRGQRVISGVLL*HSSHSFPEKGS Trigger: AGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTAGAAGTCCTTGGGTTTaGTGCCCAGCACAGACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILHIPFLRKGLSLNLELGRSPWV*CPAQTG Trigger: GCCAGTCTGTGCTGGGCACAAAACCCAAGGACTTCT...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR TCA 72 bp | AGCCCCAGTGATTTTCCTGTCTCTGCACACATAGCATaGGGCTTACAGGTATGTATCGCCATGTTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPSDFPVSAHIA*GLQVCIAMFCL Trigger: GAGACAGAACATGGCGATACATACCTGTAAGCCTCATGCTATGTGTGCAGAGACAGGAAAATCACTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR GCA 72 bp | CAAGTGTATGCATATGAAGACGTGTTTACCTGTGGGTaGAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVYAYEDVFTCG*KQRPEGDFRCS Trigger: AGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTTGTCTCTTCACATGGTaGCCTGGACCTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILHIPFLRKGLSLNLELGCLFTW*PGPELR Trigger: CCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACA...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTAGAAGTCCTTGGGTTTaGTGCCCAGCACAGACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: YSKCLLSLCVFRVLAYHPRSPWV*CPAQTG Trigger: GCCAGTCTGTGCTGGGCACAAAACCCAAGGACTTCT...AGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGACACTTGCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTGAACTCAGGTCTTCGTACAGAAGTGATTTACTaGTGGAAACTAAGCCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SPCSVSSHGCLDLNSGLRTEVIY*WKLSQI Trigger: AATCTGGCTTAGTTTCCACAAGTAAATCACTTCTGT...ACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGACAGAAGTGATTTACTaGTGGAAACTAAGCCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQTEVIY*WKLSQI Trigger: AATCTGGCTTAGTTTCCACAAGTAAATCACTTCTGT...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGTATAGCAAGTGTCTCTaGTCTCTGTGTGTATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAILHIPFLRKGLSLNLEYSKCL*SLCVFR Trigger: CCTGAATACACACAGAGACAAGAGACACTTGCTATA...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR TCA 72 bp | GAGTTTTGCATTCCTTTATTGTATCACAAACAGTGGTaGAACAGACGGAGGCAGCATGAAGCTGTGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: EFCIPLLYHKQW*NRRRQHEAVHL Trigger: CAGATGCACAGCTTCATGCTGCCTCCGTCTGTTTCACCACTGTTTGTGATACAATAAAGGAATGCAAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATaGATACTATATAGCAAGTGTCTCTTGTCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVGHT*ILYSKCLLSLC Trigger: ACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGCAGGAAAGAAGCCCTTaGGGGCTATGCATGTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: VSCLCVYSGYWLIILVYLQERSP*GLCMFM Trigger: CATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTG...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGGCTTACAGGTATGTATCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGGCAAAGACATTCCGTTaGCTTCTGAAACAAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: MRLTGMYRHVLSLHMVAWAKTFR*LLKQIL Trigger: TAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGC...CCAGGCAACCATGTGAAGAGACAGAACATGGCGATACATACCTGTAAGCCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR GCA 72 bp | GACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATaGTATCCTAACAGAACAATTAGTATGTGGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DRKEALWGYACL*YPNRTISMWTA Trigger: TGCAGTCCACATACTAATTGTTCTGTTAGGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGCAGGAAAGAAGCCCTTaGGGGCTATGCATGTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: CKSSKDIPFASETNLRCLQERSP*GLCMFM Trigger: CATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTG...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR TCA 72 bp | TTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATaGGTCCGCTTTGCAAGTGTTTCTCGGAAGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLVETKPDFSVL*VRFASVSRKLF Trigger: GAAAAGCTTCCGAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CCA 72 bp | GATATCAAATGCCTAACTTTAAATGGTGCTGATATGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DIKCLTLNGADM*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCACATATCAGCACCATTTAAAGTTAGGCATTTGATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGCACTGCACAAAGTCCTaGGTGTTAAGGAAGAATATT | + |
|
Preference number: 3 (lower is better) Translates to: GHTCILYSKCLLSLCVFRHCTKS*VLRKNI Trigger: AATATTCTTCCTTAACACCAAGGACTTTGTGCAGTG...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTACAGAAGTGATTTACTaGTGGAAACTAAGCCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCTEVIY*WKLSQI Trigger: AATCTGGCTTAGTTTCCACAAGTAAATCACTTCTGT...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR-3UTR CAA 90 bp | CATCATCTTGCTATTACTTCTGTAGAAACTGGACACTCTTGCAAAGCAATTGAGGCAAAGACATTCCGTTaGCTTCTGAAACAAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HHLAITSVETGHSCKAIEAKTFR*LLKQIL Trigger: TAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGC...CTCAATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTAATAGCAAGATGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CCA 72 bp | GCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGGTATTaGCTTATCATCCTTGTGTATTTGTTATGTGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: ASVSCLCVYSGY*LIILVYLLCEF Trigger: AAATTCACATAACAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGACACTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGACAGTCCTGCTTCCATaGCCTGGCACTGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CMHMKTCLPVGASRGQRVTVLLP*PGTASG Trigger: ACCAGAGGCAGTGCCAGGCCATGGAAGCAGGACTGT...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGAGCAACCCCACCTCCTaGCCTTTCTGGTCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CMHMKTCLPVGASRGQRVSNPTS*PFWSKQ Trigger: TTGCTTGGACCAGAAAGGCCAGGAGGTGGGGTTGCT...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAACAGTCCTGCTTCCATaGCCTGGCACTGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRTVLLP*PGTASG Trigger: ACCAGAGGCAGTGCCAGGCCATGGAAGCAGGACTGT...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCTTACAGGTATGTATCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACAGTCCTGCTTCCATaGCCTGGCACTGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRLTGMYRHVLSLHMVAWTVLLP*PGTASG Trigger: ACCAGAGGCAGTGCCAGGCCATGGAAGCAGGACTGT...CCAGGCAACCATGTGAAGAGACAGAACATGGCGATACATACCTGTAAGCCTCAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGAGAGCTGCTGTCCTCTaGGCACTGCTTTTTCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQRAAVL*ALLFPV Trigger: AACGGGAAAAAGCAGTGCGCAGAGGACAGCAGCTCT...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCTGATTGGGCCACGCTaGTTTTCCATTGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQLIGPR*FSIAME Trigger: CTCCATGGCAATGGAAAAGCAGCGTGGCCCAATCAG...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGGAGAAGCTCCTGCTGTaGTATGGGCTTGGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQEKLLL*YGLGSP Trigger: TGGAGAACCAAGCCCATACCACAGCAGGAGCTTCTC...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAGAGAAGCTCCTGCTGTaGTATGGGCTTGGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHREKLLL*YGLGSP Trigger: TGGAGAACCAAGCCCATACCACAGCAGGAGCTTCTC...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGACCGGAAGGATATATCTaGTGGAGACAGAGCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRPEGYI*WRQSED Trigger: GTCCTCGCTCTGTCTCCACCAGATATATCCTTCCGG...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCGCTTCTCAAGCTCCTTaGCCCGCCTCTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CYNPKPFLRQERSPLGLCASQAP*PASLPP Trigger: TGGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGC...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCGCTTCTCAAGCTCCTTaGCCCGCCTCTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLRQERSPLGLCMFMLSASQAP*PASLPP Trigger: TGGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGC...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CAA 72 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATaGAACCTGGAGCTAGGTTGGCAGCCAGCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILHIPFLRKGLS*NLELGWQPASP Trigger: GGGGCTTGCTGGCTGCCAACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TGTGGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCTTTTGTGCCTGTTTCTaGAACTGGCTGCACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCKQRPEGDFRCSALPFFCACF*NWLHFS Trigger: TGAAAAGTGCAGCCAGTTTCAGAAACAGGCACAAAA...GAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAAGCAAGTCTGTGCGTTaGCCAACTCTTGATCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRSKSVR*PTLDPE Trigger: TTCGGGATCAAGAGTTGGCCAACGCACAGACTTGCT...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTCCTGCTTCCATGGCCTaGCACTGCCTCTGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: ILHIPFLRKGLSLNLELGPASMA*HCLWYI Trigger: GATGTACCAGAGGCAGTGCCAGGCCATGGAAGCAGG...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAGCTTTTCCATTGCCATaGAGCTTGGCGAGATCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRAFPLP*SLARSL Trigger: AAGCGATCTCGCCAAGCTCCATGGCAATGGAAAAGC...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCTTACAGGTATGTATCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGCCGGAAGGATATATCTaGTGGAGACAGAGCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRLTGMYRHVLSLHMVAWPEGYI*WRQSED Trigger: GTCCTCGCTCTGTCTCCACCAGATATATCCTTCCGG...CCAGGCAACCATGTGAAGAGACAGAACATGGCGATACATACCTGTAAGCCTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCAGCTTCTCAAGCTCCTTaGCCCGCCTCTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVLGIHAYYIAASQAP*PASLPP Trigger: TGGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGC...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCTCCATGGCCTGGCACTaGCTCTGGTACATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLRQERSPLGLCMFMLSSMAWH*LWYIFS Trigger: ACTGAAGATGTACCAGAGGCAGTGCCAGGCCATGGA...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCGAGAAGCTCCTGCTGTaGTATGGGCTTGGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CYNPKPFLRQERSPLGLCEKLLL*YGLGSP Trigger: TGGAGAACCAAGCCCATACCACAGCAGGAGCTTCTC...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCCTGCTTCCATGGCCTaGCACTGCCTCTGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: LFPICLLTGNAIIVRAKSPASMA*HCLWYI Trigger: GATGTACCAGAGGCAGTGCCAGGCCATGGAAGCAGG...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGGTTTTCAGCTGGCTCTaGAAGACGTATGCCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAILHIPFLRKGLSLNLEVFSWL*KTYAPA Trigger: AGCAGGGGCATACGTCTTCCAGAGCCAGCTGAAAAC...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAGAAGGATATATCTGGTaGAGACAGAGCGAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHREGYIW*RQSEDF Trigger: GAAGTCCTCGCTCTGTCTCCACCAGATATATCCTTC...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGGAAGGATATATCTGGTaGAGACAGAGCGAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQEGYIW*RQSEDF Trigger: GAAGTCCTCGCTCTGTCTCCACCAGATATATCCTTC...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTGAACTCAGGTCTTCGTGTTTCTGAAACTGGCTaGACTTTTCAGAGAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SPCSVSSHGCLDLNSGLRVSETG*TFQRAT Trigger: AGTTGCTCTCTGAAAAGTGCAGCCAGTTTCAGAAAC...ACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTAGCAACCCCACCTCCTaGCCTTTCTGGTCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCSNPTS*PFWSKQ Trigger: TTGCTTGGACCAGAAAGGCCAGGAGGTGGGGTTGCT...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TCGCCATGTTCTGTCTCTTCACATGGTTGCCTGGACCTGAACTCAGGTCTTCGTTCCTGCAGGAGCTTCTaGTTTTCATCTTGTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCSVSSHGCLDLNSGLRSCRSF*FSSCNL Trigger: CAAGTTACAAGATGAAAACCAGAAGCTCCTGCAGGA...ACGAAGACCTGAGTTCAGGTCCAGGCAACCATGTGAAGAGACAGAACATGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCCTGCTTCCATGGCCTaGCACTGCCTCTGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALPASMA*HCLWYI Trigger: GATGTACCAGAGGCAGTGCCAGGCCATGGAAGCAGG...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGGCTTTTCCATTGCCATaGAGCTTGGCGAGATCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAILHIPFLRKGLSLNLEAFPLP*SLARSL Trigger: AAGCGATCTCGCCAAGCTCCATGGCAATGGAAAAGC...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGAACTCATCTCTTTaGGTGGCTTCACAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CYNPKPFLRQERSPLGLCMNSSL*VASQPG Trigger: TCCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCAT...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTAGAGCTGCTGTCCTCTaGGCACTGCTTTTTCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPICLLTGNAIIVRAKSRAAVL*ALLFPV Trigger: AACGGGAAAAAGCAGTGCGCAGAGGACAGCAGCTCT...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGTCCATGGCCTGGCACTaGCTCTGGTACATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHTCILYSKCLLSLCVFRSMAWH*LWYIFS Trigger: ACTGAAGATGTACCAGAGGCAGTGCCAGGCCATGGA...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGGATGTGCACTGTGAATaGTTCTTGTTACTTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMHMKTCLPVGASRGQRVDVHCE*FLLLKS Trigger: GGACTTAAGTAACAAGAAGCATTCACAGTGCACATC...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGCTGATTGGGCCACGCTaGTTTTCCATTGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHTCILYSKCLLSLCVFRLIGPR*FSIAME Trigger: CTCCATGGCAATGGAAAAGCAGCGTGGCCCAATCAG...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGAGCAACCCCACCTCCTaGCCTTTCTGGTCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALSNPTS*PFWSKQ Trigger: TTGCTTGGACCAGAAAGGCCAGGAGGTGGGGTTGCT...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCACTCATCTCTTTGAGTaGCTTCACAGCCAGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLPAYRKCHYSESQESEITHLFE*LHSQDP Trigger: CGGATCCTGGCTGTGAAGCCACTCAAAGAGATGAGT...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGTCCTGCAGGAGCTTCTaGTTTTCATCTTGTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQSCRSF*FSSCNL Trigger: CAAGTTACAAGATGAAAACCAGAAGCTCCTGCAGGA...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGGCCTGGCACTGCCTCTaGTACATCTTCAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALAWHCL*YIFSSC Trigger: GCAGGAACTGAAGATGTACCAGAGGCAGTGCCAGGC...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGTTTTCAGCTGGCTCTaGAAGACGTATGCCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCVFSWL*KTYAPA Trigger: AGCAGGGGCATACGTCTTCCAGAGCCAGCTGAAAAC...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTTTCTCGTTTTCAGCTGGCTCTaGAAGACGTATGCCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKLSQISRFYESALQVFLVFSWL*KTYAPA Trigger: AGCAGGGGCATACGTCTTCCAGAGCCAGCTGAAAAC...GAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAATTGTCACCAACCAATaGGCTTGCCATTTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRIVTNQ*ACHFFG Trigger: ACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAAT...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTTGTTCCATCAGTTCCTaGAGCTCAGCTTCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILHIPFLRKGLSLNLELGCSISS*SSASQG Trigger: TCCTTGTGAAGCTGAGCTTCAGGAACTGATGGAACA...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGACAAGGAGAAGCTCCTaGTGTGGTATGGGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLWKLSQISRFYESALQVTRRSS*CGMGLV Trigger: AACCAAGCCCATACCACAGCAGGAGCTTCTCCTTGT...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGACAAGGAGAAGCTCCTaGTGTGGTATGGGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHTCILYSKCLLSLCVFRTRRSS*CGMGLV Trigger: AACCAAGCCCATACCACAGCAGGAGCTTCTCCTTGT...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGCTGATTGGGCCACGCTaGTTTTCCATTGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLCVYSGYWLIILVYLLIGPR*FSIAME Trigger: CTCCATGGCAATGGAAAAGCAGCGTGGCCCAATCAG...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTAGCAAGTCTGTGCGTTaGCCAACTCTTGATCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFPICLLTGNAIIVRAKSSKSVR*PTLDPE Trigger: TTCGGGATCAAGAGTTGGCCAACGCACAGACTTGCT...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CATCATCTTGCTATTACTTCTGTAGAAACTGGACACTCTTGCAAAGCAATTGAGGCCTGGCACTGCCTCTaGTACATCTTCAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHLAITSVETGHSCKAIEAWHCL*YIFSSC Trigger: GCAGGAACTGAAGATGTACCAGAGGCAGTGCCAGGC...CTCAATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTAATAGCAAGATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCTTTTCCATTGCCATaGAGCTTGGCGAGATCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCAFPLP*SLARSL Trigger: AAGCGATCTCGCCAAGCTCCATGGCAATGGAAAAGC...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGCCGGAAGGATATATCTaGTGGAGACAGAGCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSCLCVYSGYWLIILVYLPEGYI*WRQSED Trigger: GTCCTCGCTCTGTCTCCACCAGATATATCCTTCCGG...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTATGAACTCATCTCTTTaGGTGGCTTCACAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCMNSSL*VASQPG Trigger: TCCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCAT...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGATGAACTCATCTCTTTaGGTGGCTTCACAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLWKLSQISRFYESALQVMNSSL*VASQPG Trigger: TCCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCAT...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAGTGTGTTTTCTGTTCTaGCAGCTTTGTATCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRVCFLF*QLCIFY Trigger: ATAGAAGATACAAAGCTGTCAGAACAGAAAACACAC...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
||
| CDS-3UTR GCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGACAAGGAGAAGCTCCTaGTGTGGTATGGGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALTRRSS*CGMGLV Trigger: AACCAAGCCCATACCACAGCAGGAGCTTCTCCTTGT...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGAGAGCTGCTGTCCTCTaGGCACTGCTTTTTCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLRAAVL*ALLFPV Trigger: AACGGGAAAAAGCAGTGCGCAGAGGACAGCAGCTCT...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGTCCATGGCCTGGCACTaGCTCTGGTACATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLSMAWH*LWYIFS Trigger: ACTGAAGATGTACCAGAGGCAGTGCCAGGCCATGGA...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGAGTTCTCTATGCAAGTaGAGTCTTTCCATTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: CMHMKTCLPVGASRGQRVSSLCK*SLSISI Trigger: TATAGAAATGGAAAGACTGCACTTGCATAGAGAACT...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCTATCTGAAACCTGTTaGTTTGCTAACATCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQLSETC*FANILS Trigger: AGAAAGGATGTTAGCAAAGCAACAGGTTTCAGATAG...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
||
| CDS-3UTR GCA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCACCAACCAATGGGCTTaGCATTTCTTTGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLRQERSPLGLCMFMLSTNQWA*HFFGLK Trigger: TTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGT...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCACCAACCAATGGGCTTaGCATTTCTTTGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CYNPKPFLRQERSPLGLCTNQWA*HFFGLK Trigger: TTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGT...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGACATATGTGTCTACTCTaGTTGAGTTTGGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRHMCLL*LSLVYL Trigger: CAAATACACCAAACTCAAGCAGAGTAGACACATATG...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGTTAAGTCCACAGCCTTaGTTAATTCCTTTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CMHMKTCLPVGASRGQRVLSPQP*LIPFHD Trigger: ATCATGAAAAGGAATTAAGCAAGGCTGTGGACTTAA...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTAACTCCTCTAGTTTCTaGTTCAGACTGCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILHIPFLRKGLSLNLELGNSSSF*FRLLSS Trigger: TGAGCTGAGCAGTCTGAACCAGAAACTAGAGGAGTT...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGACTCATCTCTTTGAGTaGCTTCACAGCCAGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALTHLFE*LHSQDP Trigger: CGGATCCTGGCTGTGAAGCCACTCAAAGAGATGAGT...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGATTCCTTTTCATGATTaGGTTGATCTGAGACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQIPFHD*VDLRPL Trigger: CAATGGTCTCAGATCAACCCAATCATGAAAAGGAAT...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGAAGGATATATCTGGTaGAGACAGAGCGAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCEGYIW*RQSEDF Trigger: GAAGTCCTCGCTCTGTCTCCACCAGATATATCCTTC...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCGATGTGCACTGTGAATaGTTCTTGTTACTTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYNPKPFLRQERSPLGLCDVHCE*FLLLKS Trigger: GGACTTAAGTAACAAGAAGCATTCACAGTGCACATC...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGGATGTGCACTGTGAATaGTTCTTGTTACTTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAILHIPFLRKGLSLNLEDVHCE*FLLLKS Trigger: GGACTTAAGTAACAAGAAGCATTCACAGTGCACATC...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGAACTCCTCTAGTTTCTaGTTCAGACTGCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLWKLSQISRFYESALQVNSSSF*FRLLSS Trigger: TGAGCTGAGCAGTCTGAACCAGAAACTAGAGGAGTT...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGAACTCCTCTAGTTTCTaGTTCAGACTGCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHTCILYSKCLLSLCVFRNSSSF*FRLLSS Trigger: TGAGCTGAGCAGTCTGAACCAGAAACTAGAGGAGTT...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGACTCATCTCTTTGAGTaGCTTCACAGCCAGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLTHLFE*LHSQDP Trigger: CGGATCCTGGCTGTGAAGCCACTCAAAGAGATGAGT...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGTGTTCCATCAGTTCCTaGAGCTCAGCTTCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLCSISS*SSASQG Trigger: TCCTTGTGAAGCTGAGCTTCAGGAACTGATGGAACA...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCATCTTGTTGCTTACCATaGTGTCGATTTGTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVLGIHAYYIASCCLP*CRFVPS Trigger: TGATGGAACAAATCGACATCATGGTAAGCAACAAGA...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTTTCTCTTTTGTGCCTGTTTCTaGAACTGGCTGCACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WKLSQISRFYESALQVFLFCACF*NWLHFS Trigger: TGAAAAGTGCAGCCAGTTTCAGAAACAGGCACAAAA...GAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTTACATCTTCAGTTCCTaGAGGAGCTTCTGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPICLLTGNAIIVRAKSYIFSS*RSFWFS Trigger: TGAAAACCAGAAGCTCCTGCAGGAACTGAAGATGTA...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCATATGTGTCTACTCTaGTTGAGTTTGGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAILHIPFLRKGLSLNLEHMCLL*LSLVYL Trigger: CAAATACACCAAACTCAAGCAGAGTAGACACATATG...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTATTGTCACCAACCAATaGGCTTGCCATTTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCIVTNQ*ACHFFG Trigger: ACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAAT...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTTCTTGTTGCTTACCATaGTGTCGATTTGTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCSCCLP*CRFVPS Trigger: TGATGGAACAAATCGACATCATGGTAAGCAACAAGA...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGGTTAGCTTAGAAAATTaGGCTTTTAGGGTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLWKLSQISRFYESALQVVSLEN*AFRVCS Trigger: GCTACAGACCCTAAAAGCTCAATTTTCTAAGCTAAC...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGTACATCTTCAGTTCCTaGAGGAGCTTCTGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALYIFSS*RSFWFS Trigger: TGAAAACCAGAAGCTCCTGCAGGAACTGAAGATGTA...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGTACATCTTCAGTTCCTaGAGGAGCTTCTGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSCLCVYSGYWLIILVYLYIFSS*RSFWFS Trigger: TGAAAACCAGAAGCTCCTGCAGGAACTGAAGATGTA...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGACCAACCAATGGGCTTaGCATTTCTTTGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VIYLWKLSQISRFYESALTNQWA*HFFGLK Trigger: TTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGT...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGTCCTGCAGGAGCTTCTaGTTTTCATCTTGTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLCVYSGYWLIILVYLSCRSF*FSSCNL Trigger: CAAGTTACAAGATGAAAACCAGAAGCTCCTGCAGGA...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGCTAGGTATTCCTTTTCATGATTaGGTTGATCTGAGACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ILHIPFLRKGLSLNLELGIPFHD*VDLRPL Trigger: CAATGGTCTCAGATCAACCCAATCATGAAAAGGAAT...ACCTAGCTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATACATGCATACTATATAGCAATTCCTTTTCATGATTaGGTTGATCTGAGACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVLGIHAYYIAIPFHD*VDLRPL Trigger: CAATGGTCTCAGATCAACCCAATCATGAAAAGGAAT...TGCTATATAGTATGCATGTATGCCCAACACACACACACACACACACACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTATTGTCACCAACCAATaGGCTTGCCATTTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSKCLLSLCVFRVLAYHPIVTNQ*ACHFFG Trigger: ACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAAT...AGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGACACTTGCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR TCA 90 bp | CATCATCTTGCTATTACTTCTGTAGAAACTGGACACTCTTGCAAAGCAATTGAGTTTTGTGCCTGTTTCTaGAACTGGCTGCACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHLAITSVETGHSCKAIEFCACF*NWLHFS Trigger: TGAAAAGTGCAGCCAGTTTCAGAAACAGGCACAAAA...CTCAATTGCTTTGCAAGAGTGTCCAGTTTCTACAGAAGTAATAGCAAGATGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGGTTTCTGAAACTGGCTaGACTTTTCAGAGAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLVSETG*TFQRAT Trigger: AGTTGCTCTCTGAAAAGTGCAGCCAGTTTCAGAAAC...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCTGGCTTCTCATCTTaGTTAATTCCTTTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCAGFSS*LIPFHD Trigger: ATCATGAAAAGGAATTAAGCAAGATGAGAAGCCAGC...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
||
| CDS-3UTR GCA 90 bp | CATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCAGAAATCTTAAGTCCACAGCCTTaGTTAATTCCTTTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPAYRKCHYSESQESEILSPQP*LIPFHD Trigger: ATCATGAAAAGGAATTAAGCAAGGCTGTGGACTTAA...GATTTCTGACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CAA 72 bp | GTTGGGCATACATGCATACTATATAGCAAGTGTCTCTaGTCTCTGTGTGTATTCAGGGTATTGGCTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGHTCILYSKCL*SLCVFRVLAYH Trigger: ATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGAGTTCTCTATGCAAGTaGAGTCTTTCCATTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: YLWKLSQISRFYESALQVSSLCK*SLSISI Trigger: TATAGAAATGGAAAGACTGCACTTGCATAGAGAACT...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTAGTTCTCTATGCAAGTaGAGTCTTTCCATTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LFPICLLTGNAIIVRAKSSSLCK*SLSISI Trigger: TATAGAAATGGAAAGACTGCACTTGCATAGAGAACT...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGCATATGTGTCTACTCTaGTTGAGTTTGGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CKSSKDIPFASETNLRCLHMCLL*LSLVYL Trigger: CAAATACACCAAACTCAAGCAGAGTAGACACATATG...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CAA 72 bp | ATTATAGTGAGAGCCAAGAGTCAGAAATCCACATGTTaGCTTCTATCCTGCTTACTACAGGGTACTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: IIVRAKSQKSTC*LLSCLLQGTFI Trigger: AATAAAAGTACCCTGTAGTAAGCAGGATAGAAGCAAACATGTGGATTTCTGACTCTTGGCTCTCACTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| 3UTR CAA 72 bp | GTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTaGTGTATTTGTTATGTGAATTTCATTGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVCIQGIGLSS*CICYVNFIVHH Trigger: ATGATGAACAATGAAATTCACATAACAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 90 bp | GCAACCCCACCTCCTGGCCTTTCTGGTCCAAGCAAGTCTGTGCGTTaGCCAACTCTTGATCCCGAAGGTCTAACCGTGTCTCTAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATPPPGLSGPSKSVR*PTLDPEGLTVSLKP Trigger: GGGCTTTAGAGACACGGTTAGACCTTCGGGATCAAGAGTTGGCCAACGCACAGACTTGCTTGGACCAGAAAGGCCAGGAGGTGGGGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS GCA 90 bp | TCTGTCTCCACTGGTCTCCGTTTTCAGCTGGCTCTGGAAGACGTATaGCCCTGCTTCACCATAGCTGCTCTGATTGGGCCACGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVSTGLRFQLALEDV*PCFTIAALIGPRCF Trigger: AAAGCAGCGTGGCCCAATCAGAGCAGCTATGGTGAAGCAGGGGCATACGTCTTCCAGAGCCAGCTGAAAACGGAGACCAGTGGAGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGAAGCTTCTCAAGCTCCTaGGCCCGCCTCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRSFSSS*ARLSSS Trigger: GGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGCT...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS TCA 90 bp | TCCTGGCCTTTCTGGTCCAAGCAAGTCTGTGCGTTGGCCAACTCTTaGTCCCGAAGGTCTAACCGTGTCTCTAAAGCCCGCATCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SWPFWSKQVCALANS*SRRSNRVSKARIFL Trigger: AAGGAAGATGCGGGCTTTAGAGACACGGTTAGACCTTCGGGATCAAGAGTTGGCCAACGCACAGACTTGCTTGGACCAGAAAGGCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS TCA 90 bp | TCACTCACGGCCGACTTTAACTTCTCGATAATGAACTCATCTCTTTaGGTGGCTTCACAGCCAGGATCCGACTCACACACCAGGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTADFNFSIMNSSL*VASQPGSDSHTRRG Trigger: CCCTCGCCTGGTGTGTGAGTCGGATCCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCATTATCGAGAAGTTAAAGTCGGCCGTGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS GCA 90 bp | CCTGCTTCCATGGCCTGGCACTGCCTCTGGTACATCTTCAGTTCCTaGAGGAGCTTCTGGTTTTCATCTTGTAACTTGTTCCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PASMAWHCLWYIFSS*RSFWFSSCNLFLLS Trigger: GCTGAGCAGGAACAAGTTACAAGATGAAAACCAGAAGCTCCTGCAGGAACTGAAGATGTACCAGAGGCAGTGCCAGGCCATGGAAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS TCA 90 bp | AGGGCAGCTTTCTTCATGACAGTTGCTATAGTGACCTCCTTCTGGTaGAGTTCCTGGGTGAGTTCCGAGATCTCACTCCTCAACCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAAFFMTVAIVTSFW*SSWVSSEISLLNRS Trigger: GGAACGGTTGAGGAGTGAGATCTCGGAACTCACCCAGGAACTTCACCAGAAGGAGGTCACTATAGCAACTGTCATGAAGAAAGCTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045513.13 ENSMUST00000152377.2 |
||
| CDS TCA 90 bp | AGGACTTCATTGTCACCAACCAATGGGCTTGCCATTTCTTTGGTCTaGAATGGCAAAGGCGACAAGGGTGTGGGGCTTCTGTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTSLSPTNGLAISLV*NGKGDKGVGLLFSS Trigger: CGAGCTGAACAGAAGCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 90 bp | TTCATTGTCACCAACCAATGGGCTTGCCATTTCTTTGGTCTGAAATaGCAAAGGCGACAAGGGTGTGGGGCTTCTGTTCAGCTCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIVTNQWACHFFGLK*QRRQGCGASVQLAV Trigger: GACTGCGAGCTGAACAGAAGCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 90 bp | GAGCGAGGACTTCATTGTCACCAACCAATGGGCTTGCCATTTCTTTaGTCTGAAATGGCAAAGGCGACAAGGGTGTGGGGCTTCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERGLHCHQPMGLPFL*SEMAKATRVWGFCS Trigger: TGAACAGAAGCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAGTCCTCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | GGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCTTCTCTTTTCCTGTTATCTaGAGCAGTCTGCACTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GCKQRPEGDFRCSALPFFSFPVI*SSLHFT Trigger: GGTGAAGTGCAGACTGCTCAAGATAACAGGAAAAGA...GAAGAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGTCATCGATGTGTGTGTaGAGCAGCTTCTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CMHMKTCLPVGASRGQRVSSMCV*SSFSSS Trigger: GGAGCTTGAGAAGCTGCTCAACACACACATCGATGA...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTATGCATATGAAGACGTGTTTACCTGTGGGTGCAAGCAGAGGCCAGAGGGTGTCCCAGTCTAGCTTCTaGTTGCTTACCATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CMHMKTCLPVGASRGQRVSQSSF*LLTMMS Trigger: CGACATCATGGTAAGCAACAAGAAGCTAGACTGGGA...CACCCTCTGGCCTCTGCTTGCACCCACAGGTAAACACGTCTTCATATGCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTGCAAGCAGAGGCCAGAGGGTGATTTCAGGTGTTCTGCTCTGCCATTCTTTTCATCTTGTAACTaGTTCCTGCTCAGCGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: CGCKQRPEGDFRCSALPFFSSCN*FLLSAI Trigger: AATCGCGCTGAGCAGGAACAAGTTACAAGATGAAAA...GAATGGCAGAGCAGAACACCTGAAATCACCCTCTGGCCTCTGCTTGCACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTTTCTCAGCTTCTCAAGCTCCTaGGCCCGCCTCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKLSQISRFYESALQVFLSFSSS*ARLSSS Trigger: GGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGCT...GAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGAGCTTCTCAAGCTCCTaGGCCCGCCTCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLWKLSQISRFYESALQVSFSSS*ARLSSS Trigger: GGAGGAAGAGAGGCGGGCCAAGGAGCTTGAGAAGCT...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGATCATCGATGTGTGTGTaGAGCAGCTTCTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRSSMCV*SSFSSS Trigger: GGAGCTTGAGAAGCTGCTCAACACACACATCGATGA...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS TCA 90 bp | AGCTTCTTGTTGCTTACCATGATGTCGATTTGTTCCATCAGTTCCTaGAGCTCAGCTTCACAAGGAGAAGCTCCTGCTGTGGTATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLLLTMMSICSISS*SSASQGEAPAVVWA Trigger: AGCCCATACCACAGCAGGAGCTTCTCCTTGTGAAGCTGAGCTTCAGGAACTGATGGAACAAATCGACATCATGGTAAGCAACAAGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGTCTTTTCCTGTTATCTaGAGCAGTCTGCACTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQSFPVI*SSLHFT Trigger: GGTGAAGTGCAGACTGCTCAAGATAACAGGAAAAGA...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGTTATAATCCCAAGCCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCTCATCGATGTGTGTGTaGAGCAGCTTCTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CYNPKPFLRQERSPLGLCSSMCV*SSFSSS Trigger: GGAGCTTGAGAAGCTGCTCAACACACACATCGATGA...GCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGGCTTGGGATTATAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS GCA 90 bp | CGTTTAGCTGAGTTTGGTAATTTTGTGCCTGTTTCTGAAACTGGCTaGACTTTTCAGAGAGCAACTTCTGCTGAGCATCCAGGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: RLAEFGNFVPVSETG*TFQRATSAEHPGTP Trigger: TGGTGTCCCTGGATGCTCAGCAGAAGTTGCTCTCTGAAAAGTGCAGCCAGTTTCAGAAACAGGCACAAAATTACCAAACTCAGCTAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS GCA 90 bp | GCTCGGAGCATAGGCCTTCCTCCTGATAGAGCTGGCTTCTCATCTTaGTTAATTCCTTTTCATGATTGGGTTGATCTGAGACCATTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARSIGLPPDRAGFSS*LIPFHDWVDLRPLE Trigger: TTCCAATGGTCTCAGATCAACCCAATCATGAAAAGGAATTAAGCAAGATGAGAAGCCAGCTCTATCAGGAGGAAGGCCTATGCTCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045513.13 ENSMUST00000152377.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCTCCCAGTCTAGCTTCTaGTTGCTTACCATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PFLRQERSPLGLCMFMLSSQSSF*LLTMMS Trigger: CGACATCATGGTAAGCAACAAGAAGCTAGACTGGGA...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCTCCTTTCGGTGAATTaGGTTTTGCTTCATTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQLLSVN*VLLHLV Trigger: CACCAAATGAAGCAAAACCAAATTCACCGAAAGGAG...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGAATGAACTCATCTCTTaGAGTGGCTTCACAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAILHIPFLRKGLSLNLENELIS*SGFTAR Trigger: CCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCATT...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGTTTTCATCTTGTAACTaGTTCCTGCTCAGCGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQFSSCN*FLLSAI Trigger: AATCGCGCTGAGCAGGAACAAGTTACAAGATGAAAA...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | TGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGCACAGATTTTCATCTTGTAACTaGTTCCTGCTCAGCGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: CLHSPPTLEVLGFCAQHRFSSCN*FLLSAI Trigger: AATCGCGCTGAGCAGGAACAAGTTACAAGATGAAAA...TCTGTGCTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS GCA 90 bp | CTAGTTTCTGGTTCAGACTGCTCAGCTCAAAGGGCAGTTCTTCTTTaGTGGAGGACTCCTTTCGGTGAATTTGGTTTTGCTTCATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSGSDCSAQRAVLL*WRTPFGEFGFASFG Trigger: ACCAAATGAAGCAAAACCAAATTCACCGAAAGGAGTCCTCCAGCAAAGAAGAACTGCCCTTTGAGCTGAGCAGTCTGAACCAGAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CCA 90 bp | GTTTCTGGTTCAGACTGCTCAGCTCAAAGGGCAGTTCTTCTTTGCTaGAGGACTCCTTTCGGTGAATTTGGTTTTGCTTCATTTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSGSDCSAQRAVLLC*RTPFGEFGFASFGV Trigger: TACACCAAATGAAGCAAAACCAAATTCACCGAAAGGAGTCCTCCAGCAAAGAAGAACTGCCCTTTGAGCTGAGCAGTCTGAACCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCCTTAGACAGGAAAGAAGCCCTTTGGGGCTATGCATGTTTATGCTATCCTACCATGATGTCGATTaGTTCCATCAGTTCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PFLRQERSPLGLCMFMLSYHDVD*FHQFLK Trigger: CTTCAGGAACTGATGGAACAAATCGACATCATGGTA...GGATAGCATAAACATGCATAGCCCCAAAGGGCTTCTTTCCTGTCTAAGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTCCCAGTCTAGCTTCTaGTTGCTTACCATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLWKLSQISRFYESALQVSQSSF*LLTMMS Trigger: CGACATCATGGTAAGCAACAAGAAGCTAGACTGGGA...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTAATGAACTCATCTCTTaGAGTGGCTTCACAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCNELIS*SGFTAR Trigger: CCTGGCTGTGAAGCCACTCAAAGAGATGAGTTCATT...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTGCCCAGATGTGTCTACTCTGCTaGAGTTTGGTGTATTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRCLHSPPTLEVLGFCAQMCLLC*SLVYLL Trigger: TAACAAATACACCAAACTCAAGCAGAGTAGACACAT...CTGGGCACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS TCA 90 bp | TTAGGAGAAGGGGAATATGATGACTCAACTCTTTTCCTGTTATCTTaGGCAGTCTGCACTTCACCCATTCTCAGCAGTTCTCTATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGEGEYDDSTLFLLS*AVCTSPILSSSLCK Trigger: CTTGCATAGAGAACTGCTGAGAATGGGTGAAGTGCAGACTGCTCAAGATAACAGGAAAAGAGTTGAGTCATCATATTCCCCTTCTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS-3UTR CAA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGTCTTTTCCTGTTATCTaGAGCAGTCTGCACTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GHTCILYSKCLLSLCVFRSFPVI*SSLHFT Trigger: GGTGAAGTGCAGACTGCTCAAGATAACAGGAAAAGA...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | TTATTTCCCATCTGCCTGCTTACAGGAAATGCCATTATAGTGAGAGCCAAGAGTCACTGTGAATGCTTCTaGTTACTTAAGTCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPICLLTGNAIIVRAKSHCECF*LLKSTA Trigger: GGCTGTGGACTTAAGTAACAAGAAGCATTCACAGTG...ACTCTTGGCTCTCACTATAATGGCATTTCCTGTAAGCAGGCAGATGGGAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | TACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTACCATGATGTCGATTaGTTCCATCAGTTCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLWKLSQISRFYESALQVYHDVD*FHQFLK Trigger: CTTCAGGAACTGATGGAACAAATCGACATCATGGTA...CACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGTACCATGATGTCGATTaGTTCCATCAGTTCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHTCILYSKCLLSLCVFRYHDVD*FHQFLK Trigger: CTTCAGGAACTGATGGAACAAATCGACATCATGGTA...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTTTCTCCAGTCTAGCTTCTTGTaGCTTACCATGATGTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: WKLSQISRFYESALQVFLQSSFL*LTMMSI Trigger: AATCGACATCATGGTAAGCAACAAGAAGCTAGACTG...GAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | GGGCATACATGCATACTATATAGCAAGTGTCTCTTGTCTCTGTGTGTATTCAGGCTCCTTTCGGTGAATTaGGTTTTGCTTCATTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHTCILYSKCLLSLCVFRLLSVN*VLLHLV Trigger: CACCAAATGAAGCAAAACCAAATTCACCGAAAGGAG...CCTGAATACACACAGAGACAAGAGACACTTGCTATATAGTATGCATGTATGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | ACAAATCTTAGGTGTCTGCATAGTCCTCCCACTTTAGAAGTCCTTGGGTTTTGTCTCCTTTCGGTGAATTaGGTTTTGCTTCATTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TNLRCLHSPPTLEVLGFCLLSVN*VLLHLV Trigger: CACCAAATGAAGCAAAACCAAATTCACCGAAAGGAG...ACAAAACCCAAGGACTTCTAAAGTGGGAGGACTATGCAGACACCTAAGATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS-3UTR CAA 90 bp | TCTGCCATTCTTCACATTCCTTTCCTGAGAAAGGGTCTCTCATTGAACCTGGAGATGTGTCTACTCTGCTaGAGTTTGGTGTATTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SAILHIPFLRKGLSLNLEMCLLC*SLVYLL Trigger: TAACAAATACACCAAACTCAAGCAGAGTAGACACAT...CTCCAGGTTCAATGAGAGACCCTTTCTCAGGAAAGGAATGTGAAGAATGGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTGTCTCTGTGTGTATTCAGGGTATTGGCTTATCATCCTTGTGTATTTGCAGTCTAGCTTCTTGTaGCTTACCATGATGTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSCLCVYSGYWLIILVYLQSSFL*LTMMSI Trigger: AATCGACATCATGGTAAGCAACAAGAAGCTAGACTG...CAAATACACAAGGATGATAAGCCAATACCCTGAATACACACAGAGACAAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | TGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGCAAGTGTTTCTCTCTGTTCTGACAGCTTaGTATCTTCTATCTGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WKLSQISRFYESALQVFLSVLTA*YLLSET Trigger: GGTTTCAGATAGAAGATACAAAGCTGTCAGAACAGA...GAGAAACACTTGCAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
||
| CDS-3UTR CAA 90 bp | TGTAAAAGCAGCAAAGACATTCCGTTTGCTTCTGAAACAAATCTTAGGTGTCTGCACTGTGAATGCTTCTaGTTACTTAAGTCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CKSSKDIPFASETNLRCLHCECF*LLKSTA Trigger: GGCTGTGGACTTAAGTAACAAGAAGCATTCACAGTG...CAGACACCTAAGATTTGTTTCAGAAGCAAACGGAATGTCTTTGCTGCTTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 90 bp | TCTTGTTACTTAAGTCCACAGCCTTGCTTAATTCCTTTTCATGATTaGGTTGATCTGAGACCATTGGAAACAACTCCTTCCTTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCYLSPQPCLIPFHD*VDLRPLETTPSFSF Trigger: AAAGGAAAAGGAAGGAGTTGTTTCCAATGGTCTCAGATCAACCCAATCATGAAAAGGAATTAAGCAAGGCTGTGGACTTAAGTAACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS-3UTR CAA 90 bp | GTGATTTACTTGTGGAAACTAAGCCAGATTTCTCGGTTTTATGAGTCCGCTTTGATGTGTCTACTCTGCTaGAGTTTGGTGTATTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VIYLWKLSQISRFYESALMCLLC*SLVYLL Trigger: TAACAAATACACCAAACTCAAGCAGAGTAGACACAT...CAAAGCGGACTCATAAAACCGAGAAATCTGGCTTAGTTTCCACAAGTAAATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 72 bp | AGGCTGTCCAGCTTCTGCCGAAGCAACCCCACCTCCTaGCCTTTCTGGTCCAAGCAAGTCTGTGCGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSSFCRSNPTS*PFWSKQVCALA Trigger: GGCCAACGCACAGACTTGCTTGGACCAGAAAGGCCAGGAGGTGGGGTTGCTTCGGCAGAAGCTGGACAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS GCA 72 bp | GATCCGACTCACACACCAGGCGAGGGATCTCAGAGCTaGTGTCCTCTGCGCACTGCTTTTTCCCGTTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPTHTPGEGSQS*CPLRTAFSRLA Trigger: AGCTAAACGGGAAAAAGCAGTGCGCAGAGGACAGCAGCTCTGAGATCCCTCGCCTGGTGTGTGAGTCGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS TCA 72 bp | ACTCGGTGTGTCTCTGCAGCTCATCGATGTGTGTGTTaGGCAGCTTCTCAAGCTCCTTGGCCCGCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TRCVSAAHRCVC*AASQAPWPASL Trigger: AAGAGAGGCGGGCCAAGGAGCTTGAGAAGCTGCTCAACACACACATCGATGAGCTGCAGAGACACACCGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS CCA 72 bp | TCACTCTTCACCTCTGACAGTCCTGCTTCCATGGCCTaGCACTGCCTCTGGTACATCTTCAGTTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLFTSDSPASMA*HCLWYIFSSCR Trigger: CCTGCAGGAACTGAAGATGTACCAGAGGCAGTGCCAGGCCATGGAAGCAGGACTGTCAGAGGTGAAGAGTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS CAA 72 bp | GGTAGAGGACCTCCTGCTTGTCCCACTCCCTCGACTTaGCTCGGAACTCCTCTAGTTTCTGGTTCAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGPPACPTPST*LGTPLVSGSDC Trigger: GCAGTCTGAACCAGAAACTAGAGGAGTTCCGAGCAAAGTCGAGGGAGTGGGACAAGCAGGAGGTCCTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
||
| CDS CAA 72 bp | AACTCGGTGTGTCTCTGCAGCTCATCGATGTGTGTGTaGAGCAGCTTCTCAAGCTCCTTGGCCCGCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSVCLCSSSMCV*SSFSSSLARLS Trigger: AGAGAGGCGGGCCAAGGAGCTTGAGAAGCTGCTCAACACACACATCGATGAGCTGCAGAGACACACCGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS TCA 72 bp | TTGTCACCAACCAATGGGCTTGCCATTTCTTTGGTCTaGAATGGCAAAGGCGACAAGGGTGTGGGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPTNGLAISLV*NGKGDKGVGLL Trigger: CAGAAGCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
||
| CDS GCA 72 bp | ATTACTAGATTACATTTCTCTAGGCTGTCCAGCTTCTaGCGAAGCAACCCCACCTCCTGGCCTTTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ITRLHFSRLSSF*RSNPTSWPFWS Trigger: GGACCAGAAAGGCCAGGAGGTGGGGTTGCTTCGGCAGAAGCTGGACAGCCTAGAGAAATGTAATCTAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CCA 72 bp | ACCAACCAATGGGCTTGCCATTTCTTTGGTCTGAAATaGCAAAGGCGACAAGGGTGTGGGGCTTCTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TNQWACHFFGLK*QRRQGCGASVQ Trigger: CTGAACAGAAGCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS CCA 72 bp | CTTCATTGTCACCAACCAATGGGCTTGCCATTTCTTTaGTCTGAAATGGCAAAGGCGACAAGGGTGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LHCHQPMGLPFL*SEMAKATRVWG Trigger: GCCCCACACCCTTGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS CAA 72 bp | AGTTCCTGCAGGAGCTTCTGGTTTTCATCTTGTAACTaGTTCCTGCTCAGCGCGATTTCACTCACGGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SSCRSFWFSSCN*FLLSAISLTAD Trigger: GTCGGCCGTGAGTGAAATCGCGCTGAGCAGGAACAAGTTACAAGATGAAAACCAGAAGCTCCTGCAGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS TCA 72 bp | TTCTTCATGACAGTTGCTATAGTGACCTCCTTCTGGTaGAGTTCCTGGGTGAGTTCCGAGATCTCACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFMTVAIVTSFW*SSWVSSEISLL Trigger: GAGGAGTGAGATCTCGGAACTCACCCAGGAACTTCACCAGAAGGAGGTCACTATAGCAACTGTCATGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045513.13 ENSMUST00000152377.2 |
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| CDS GCA 72 bp | GCAGGAGCTTCTGGTTTTCATCTTGTAACTTGTTCCTaGTCAGCGCGATTTCACTCACGGCCGACTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: AGASGFHLVTCS*SARFHSRPTLT Trigger: AGTTAAAGTCGGCCGTGAGTGAAATCGCGCTGAGCAGGAACAAGTTACAAGATGAAAACCAGAAGCTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CCA 72 bp | TGGAGACAGAGCGAGGACTTCATTGTCACCAACCAATaGGCTTGCCATTTCTTTGGTCTGAAATGGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: WRQSEDFIVTNQ*ACHFFGLKWQR Trigger: CCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAGTCCTCGCTCTGTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS CAA 72 bp | ACAGAGCGAGGACTTCATTGTCACCAACCAATGGGCTaGCCATTTCTTTGGTCTGAAATGGCAAAGGCGACA | + |
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Preference number: 6 (lower is better) Translates to: TERGLHCHQPMG*PFLWSEMAKAT Trigger: TGTCGCCTTTGCCATTTCAGACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAGTCCTCGCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS TCA 72 bp | TTGCTTACCATGATGTCGATTTGTTCCATCAGTTCCTaGAGCTCAGCTTCACAAGGAGAAGCTCCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LLTMMSICSISS*SSASQGEAPAV Trigger: CACAGCAGGAGCTTCTCCTTGTGAAGCTGAGCTTCAGGAACTGATGGAACAAATCGACATCATGGTAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CAA 72 bp | AAGGATATATCTGGTGGAGACAGAGCGAGGACTTCATaGTCACCAACCAATGGGCTTGCCATTTCTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: KDISGGDRARTS*SPTNGLAISLV Trigger: GACCAAAGAAATGGCAAGCCCATTGGTTGGTGACAATGAAGTCCTCGCTCTGTCTCCACCAGATATATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS TCA 72 bp | GGGGAATATGATGACTCAACTCTTTTCCTGTTATCTTaGGCAGTCTGCACTTCACCCATTCTCAGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GEYDDSTLFLLS*AVCTSPILSSS Trigger: AGAACTGCTGAGAATGGGTGAAGTGCAGACTGCTCAAGATAACAGGAAAAGAGTTGAGTCATCATATTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS GCA 72 bp | TGCACTTCACCCATTCTCAGCAGTTCTCTATGCAAGTaGAGTCTTTCCATTTCTATAATCCTCAGGAGATCG | + |
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Preference number: 6 (lower is better) Translates to: CTSPILSSSLCK*SLSISIILRRS Trigger: CGATCTCCTGAGGATTATAGAAATGGAAAGACTGCACTTGCATAGAGAACTGCTGAGAATGGGTGAAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CAA 72 bp | TCTAAAGCCCGCATCTTCCTTTCCCAGTCTAGCTTCTaGTTGCTTACCATGATGTCGATTTGTTCCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKARIFLSQSSF*LLTMMSICSIS Trigger: ACTGATGGAACAAATCGACATCATGGTAAGCAACAAGAAGCTAGACTGGGAAAGGAAGATGCGGGCTTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 ENSMUST00000152377.2 |
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| CDS CAA 72 bp | TCAAGCTTGTTAATTGATGTGCACTGTGAATGCTTCTaGTTACTTAAGTCCACAGCCAAGTACCGTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSLLIDVHCECF*LLKSTAKYRAG Trigger: CCCTGCACGGTACTTGGCTGTGGACTTAAGTAACAAGAAGCATTCACAGTGCACATCAATTAACAAGCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
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| CDS CAA 90 bp | AGCTTGGCGAGATCGCTTCGGAGTCTTTCGTTCTCATATTCAAGCTaGTTAATTGATGTGCACTGTGAATGCTTCTTGTTACTTAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLARSLRSLSFSYSS*LIDVHCECFLLLKS Trigger: GGACTTAAGTAACAAGAAGCATTCACAGTGCACATCAATTAACAAGCTTGAATATGAGAACGAAAGACTCCGAAGCGATCTCGCCAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS GCA 72 bp | TCATATTCAAGCTTGTTAATTGATGTGCACTGTGAATaGTTCTTGTTACTTAAGTCCACAGCCAAGTACCGT | + |
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Preference number: 6 (lower is better) Translates to: SYSSLLIDVHCE*FLLLKSTAKYR Trigger: ACGGTACTTGGCTGTGGACTTAAGTAACAAGAAGCATTCACAGTGCACATCAATTAACAAGCTTGAATATGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045513.13 |
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| CDS GCA 72 bp | ACTGTGAATGCTTCTTGTTACTTAAGTCCACAGCCTTaGTTAATTCCTTTTCATGATTGGGTTGATCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TVNASCYLSPQP*LIPFHDWVDLR Trigger: TCTCAGATCAACCCAATCATGAAAAGGAATTAAGCAAGGCTGTGGACTTAAGTAACAAGAAGCATTCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS CAA 72 bp | AGATCGCTTCGGAGTCTTTCGTTCTCATATTCAAGCTaGTTAATTGATGTGCACTGTGAATGCTTCTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: RSLRSLSFSYSS*LIDVHCECFLL Trigger: TAACAAGAAGCATTCACAGTGCACATCAATTAACAAGCTTGAATATGAGAACGAAAGACTCCGAAGCGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045513.13 ENSMUST00000115592.8 ENSMUST00000115593.10 |
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| CDS GCA 72 bp | TCATATTCAAGCTTGTTAATTGATGTGCACTGTGAATaGTTCTTGTTACTTAAGTCCACAGCCTTGCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SYSSLLIDVHCE*FLLLKSTALLN Trigger: ATTAAGCAAGGCTGTGGACTTAAGTAACAAGAAGCATTCACAGTGCACATCAATTAACAAGCTTGAATATGA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115592.8 ENSMUST00000115593.10 |
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